********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.294 C 0.205 G 0.205 T 0.294 

MOTIF 1-GTAAATAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 42 P= 9.5e-002
 0.001679 0.001171 0.995471 0.001679
 0.001679 0.001171 0.001171 0.995978
 0.916956 0.080194 0.001171 0.001679
 0.810862 0.107202 0.080257 0.001679
 0.909767 0.020927 0.001171 0.068134
 0.001679 0.163474 0.001171 0.833675
 0.916892 0.040746 0.040683 0.001679
 0.067210 0.265758 0.119896 0.547136

MOTIF 2-AGTGWTGG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 143 P= 1.9e-001
 0.879935 0.009465 0.110209 0.000391
 0.000391 0.027880 0.971339 0.000391
 0.216051 0.027865 0.112910 0.643174
 0.018776 0.000273 0.980561 0.000391
 0.254103 0.187273 0.081527 0.477097
 0.065686 0.075208 0.138338 0.720768
 0.000391 0.000273 0.998946 0.000391
 0.158325 0.050921 0.597673 0.193081

MOTIF 3-AACTATCG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 17 P= 5.0e-001
 0.706241 0.002113 0.002113 0.289532
 0.891842 0.031621 0.002113 0.074424
 0.003029 0.991830 0.002113 0.003029
 0.003029 0.002113 0.002113 0.992745
 0.992745 0.002113 0.002113 0.003029
 0.003029 0.002113 0.002113 0.992745
 0.003029 0.991830 0.002113 0.003029
 0.003029 0.002113 0.991830 0.003029

MOTIF 4-TATCGATA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 37 P= 5.0e-001
 0.001790 0.001249 0.001249 0.995712
 0.889697 0.001249 0.001249 0.107805
 0.001790 0.001249 0.001249 0.995712
 0.001790 0.910359 0.001249 0.086602
 0.086602 0.001249 0.910359 0.001790
 0.995712 0.001249 0.001249 0.001790
 0.107805 0.001249 0.001249 0.889697
 0.995712 0.001249 0.001249 0.001790

MOTIF 5-AACAGCTG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 35 P= 1.0e+000
 0.958314 0.001120 0.001120 0.039446
 0.687932 0.001120 0.001120 0.309828
 0.001605 0.995670 0.001120 0.001605
 0.996155 0.001120 0.001120 0.001605
 0.001605 0.001120 0.881963 0.115311
 0.001605 0.995670 0.001120 0.001605
 0.001605 0.001120 0.001120 0.996155
 0.001605 0.001120 0.995670 0.001605

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG1620.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG1620/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c27n07.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	1.70 seconds
********************************************************************************