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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.336 C 0.164 G 0.164 T 0.336 

MOTIF 1-GTAAAYAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 86 P= 4.1e-003
 0.000834 0.000406 0.895157 0.103603
 0.073063 0.000406 0.000406 0.926124
 0.902193 0.096567 0.000406 0.000834
 0.871612 0.099549 0.028006 0.000834
 0.876774 0.000406 0.065847 0.056972
 0.000834 0.361565 0.108671 0.528931
 0.910218 0.000406 0.088542 0.000834
 0.000834 0.292534 0.114024 0.592608

MOTIF 2-GCAAATAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 89 P= 3.6e-001
 0.001113 0.000542 0.975618 0.022727
 0.014225 0.859437 0.056207 0.070131
 0.928888 0.000542 0.023489 0.047080
 0.972749 0.023489 0.000542 0.003220
 0.942336 0.046510 0.010041 0.001113
 0.001113 0.150302 0.069604 0.778981
 0.864010 0.056207 0.074281 0.005502
 0.779735 0.077684 0.035995 0.106586

MOTIF 3-CAATTTAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 7.0e-001
 0.003971 0.990123 0.001935 0.003971
 0.793551 0.001935 0.001935 0.202580
 0.992159 0.001935 0.001935 0.003971
 0.003971 0.001935 0.001935 0.992159
 0.003971 0.248345 0.001935 0.745750
 0.003971 0.001935 0.001935 0.992159
 0.992159 0.001935 0.001935 0.003971
 0.992159 0.001935 0.001935 0.003971

MOTIF 4-AGGTGCAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 1.0e+000
 0.937931 0.001339 0.057983 0.002747
 0.116219 0.001339 0.851373 0.031070
 0.002747 0.057983 0.936522 0.002747
 0.172864 0.001339 0.001339 0.824459
 0.059392 0.001339 0.879877 0.059392
 0.116037 0.823233 0.001339 0.059392
 0.711352 0.001339 0.001339 0.285971
 0.059392 0.823050 0.001339 0.116219

MOTIF 5-AATGTGTG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 1.0e+000
 0.925913 0.023732 0.000997 0.049358
 0.809309 0.018464 0.127986 0.044240
 0.086706 0.000997 0.018464 0.893833
 0.002047 0.000997 0.994910 0.002047
 0.044240 0.043191 0.043191 0.869378
 0.171639 0.000997 0.825317 0.002047
 0.044240 0.043191 0.000997 0.911572
 0.002047 0.043191 0.952716 0.002047

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG15696.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG15696/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n08.farnam.hpc.yale.internal
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FINALTIME:	1.55 seconds
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