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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.35 C 0.15 G 0.15 T 0.35 

MOTIF 1-WGTGCACW STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 44 P= 3.3e-001
 0.419292 0.012893 0.184947 0.382868
 0.069474 0.049990 0.879288 0.001248
 0.075402 0.012893 0.025252 0.886452
 0.112919 0.000535 0.814215 0.072332
 0.072332 0.814215 0.000535 0.112919
 0.886452 0.025252 0.012893 0.075402
 0.001248 0.879288 0.049990 0.069474
 0.382868 0.184947 0.012893 0.419292

MOTIF 2-TCTTAAAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 57 P= 5.0e-001
 0.211959 0.035599 0.000754 0.751688
 0.001760 0.995726 0.000754 0.001760
 0.036605 0.015178 0.015178 0.933038
 0.060368 0.000754 0.035599 0.903280
 0.961719 0.000754 0.000754 0.036774
 0.857240 0.000754 0.105401 0.036605
 0.877661 0.035599 0.015178 0.071562
 0.207248 0.000754 0.696525 0.095473

MOTIF 3-AAGATACT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 52 P= 6.7e-001
 0.823827 0.090236 0.054715 0.031222
 0.967493 0.000643 0.030363 0.001501
 0.001501 0.180413 0.816585 0.001501
 0.967493 0.030363 0.000643 0.001501
 0.001501 0.030363 0.000643 0.967493
 0.967493 0.000643 0.030363 0.001501
 0.001501 0.848854 0.000643 0.149003
 0.091240 0.060179 0.030363 0.818217

MOTIF 4-AATGGTAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 1.0e+000
 0.864717 0.044580 0.088498 0.002204
 0.995909 0.000944 0.000944 0.002204
 0.221699 0.019008 0.000944 0.758350
 0.002204 0.000944 0.994648 0.002204
 0.002204 0.000944 0.994648 0.002204
 0.002204 0.000944 0.000944 0.995909
 0.864577 0.132276 0.000944 0.002204
 0.259537 0.009290 0.009290 0.721883

MOTIF 5-AACGAAAT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 1.0e+000
 0.996933 0.000708 0.000708 0.001652
 0.964217 0.000708 0.000708 0.034368
 0.001652 0.891975 0.000708 0.105665
 0.218698 0.038616 0.681117 0.061568
 0.931449 0.000708 0.000708 0.067136
 0.898786 0.033423 0.033423 0.034368
 0.946589 0.018335 0.000708 0.034368
 0.001652 0.000708 0.131886 0.865754

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG14655.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG14655/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n07.farnam.hpc.yale.internal
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FINALTIME:	1.76 seconds
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