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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.337 C 0.163 G 0.163 T 0.337 

MOTIF 1-ACACTGAG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 55 P= 1.2e-001
 0.761239 0.000506 0.228284 0.009971
 0.037300 0.896416 0.065236 0.001049
 0.933279 0.000506 0.065166 0.001049
 0.001049 0.932633 0.065270 0.001049
 0.022602 0.065166 0.043613 0.868619
 0.087366 0.000506 0.911079 0.001049
 0.738987 0.086789 0.151623 0.022602
 0.150586 0.000506 0.780516 0.068392

MOTIF 2-CTTGACTT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 5.0e-001
 0.002410 0.944473 0.050706 0.002410
 0.002410 0.001164 0.100408 0.896018
 0.200741 0.001164 0.050706 0.747389
 0.002410 0.001164 0.844909 0.151518
 0.846475 0.149951 0.001164 0.002410
 0.002410 0.794885 0.001164 0.201542
 0.002410 0.050786 0.050706 0.896097
 0.002410 0.050706 0.001164 0.945720

MOTIF 3-CCCWTCCT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 18 P= 5.0e-001
 0.074783 0.768141 0.001201 0.155875
 0.002487 0.891566 0.001201 0.104746
 0.002487 0.789307 0.052330 0.155875
 0.513781 0.124625 0.103460 0.258134
 0.104746 0.103460 0.001201 0.790593
 0.002487 0.993824 0.001201 0.002487
 0.053617 0.840436 0.052330 0.053617
 0.258134 0.052330 0.001201 0.688335

MOTIF 4-AATAAATA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 60 P= 5.0e-001
 0.928875 0.000940 0.068239 0.001947
 0.800305 0.017677 0.054643 0.127375
 0.001947 0.000940 0.000940 0.996174
 0.796825 0.074219 0.085871 0.043084
 0.966018 0.005147 0.026888 0.001947
 0.874557 0.059588 0.043903 0.021953
 0.001947 0.000940 0.000940 0.996174
 0.996174 0.000940 0.000940 0.001947

MOTIF 5-AAACAATA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 21 P= 7.6e-001
 0.788329 0.000860 0.000860 0.209951
 0.846403 0.000860 0.150955 0.001781
 0.739297 0.258061 0.000860 0.001781
 0.001781 0.995577 0.000860 0.001781
 0.468271 0.185128 0.221030 0.125571
 0.996499 0.000860 0.000860 0.001781
 0.001781 0.000860 0.000860 0.996499
 0.996499 0.000860 0.000860 0.001781

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG10654.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG10654/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n11.farnam.hpc.yale.internal
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FINALTIME:	1.60 seconds
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