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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.319 C 0.181 G 0.181 T 0.319 

MOTIF 1-ACCGTTAD STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 85 P= 2.4e-002
 0.885749 0.058260 0.055359 0.000631
 0.000631 0.976532 0.000359 0.022477
 0.000631 0.998379 0.000359 0.000631
 0.047542 0.037011 0.871408 0.044038
 0.043480 0.020951 0.000359 0.935210
 0.000631 0.014087 0.000359 0.984923
 0.963847 0.006042 0.029480 0.000631
 0.222473 0.166324 0.213780 0.397424

MOTIF 2-AACAATAC STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.819638 0.001521 0.118014 0.060827
 0.994284 0.001521 0.001521 0.002674
 0.002674 0.993131 0.001521 0.002674
 0.702769 0.001521 0.176543 0.119167
 0.819638 0.118014 0.001521 0.060827
 0.002674 0.001521 0.059674 0.936131
 0.994284 0.001521 0.001521 0.002674
 0.002674 0.993131 0.001521 0.002674

MOTIF 3-ACATCGAT STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 12 P= 1.0e+000
 0.833412 0.081472 0.002073 0.083043
 0.003645 0.990637 0.002073 0.003645
 0.992208 0.002073 0.002073 0.003645
 0.003645 0.002073 0.002073 0.992208
 0.036460 0.957821 0.002073 0.003645
 0.003645 0.002073 0.831840 0.162442
 0.912937 0.002073 0.002073 0.082916
 0.003645 0.002073 0.081472 0.912810

MOTIF 4-CAGTGTGA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.0e+000
 0.063355 0.840796 0.020715 0.075135
 0.981218 0.016137 0.000959 0.001686
 0.063355 0.000959 0.860551 0.075135
 0.038351 0.037624 0.000959 0.923065
 0.005053 0.000959 0.844930 0.149058
 0.090630 0.000959 0.000959 0.907452
 0.001686 0.000959 0.995669 0.001686
 0.879032 0.000959 0.111310 0.008699

MOTIF 5-GAYTTTCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 1.0e+000
 0.002507 0.001426 0.993560 0.002507
 0.994641 0.001426 0.001426 0.002507
 0.002507 0.529835 0.001426 0.466232
 0.057029 0.001426 0.055948 0.885597
 0.079599 0.055948 0.001426 0.863026
 0.057029 0.001426 0.001426 0.940119
 0.002507 0.993560 0.001426 0.002507
 0.902938 0.001426 0.001426 0.094210

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG10462.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG10462/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n10.farnam.hpc.yale.internal
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FINALTIME:	1.65 seconds
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