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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.312 C 0.188 G 0.188 T 0.312 

MOTIF 1-CAACACTG STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 173 P= 1.8e-007
 0.000326 0.984167 0.004577 0.010930
 0.992045 0.000196 0.007433 0.000326
 0.823906 0.000196 0.145295 0.030604
 0.000326 0.996156 0.000196 0.003322
 0.992033 0.000196 0.000196 0.007575
 0.000326 0.999152 0.000196 0.000326
 0.002476 0.012369 0.000196 0.984959
 0.133817 0.029285 0.774909 0.061989

MOTIF 2-AWCAGCTG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 43 P= 2.5e-002
 0.956183 0.000903 0.041408 0.001506
 0.621263 0.000903 0.000903 0.376930
 0.001506 0.996086 0.000903 0.001506
 0.929791 0.000903 0.067800 0.001506
 0.001506 0.000903 0.996086 0.001506
 0.068295 0.829004 0.101195 0.001506
 0.001506 0.000903 0.000903 0.996688
 0.001506 0.000903 0.996086 0.001506

MOTIF 3-GCGCCAAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 1.2e-001
 0.001828 0.001097 0.995246 0.001828
 0.083063 0.914011 0.001097 0.001828
 0.001828 0.001097 0.954694 0.042381
 0.001828 0.995246 0.001097 0.001828
 0.001828 0.995246 0.001097 0.001828
 0.792693 0.123146 0.001097 0.083063
 0.979190 0.001097 0.001097 0.018616
 0.723920 0.001097 0.164093 0.110891

MOTIF 4-ATCGATAG STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 43 P= 3.0e-001
 0.783752 0.000702 0.214377 0.001170
 0.058183 0.209033 0.000702 0.732083
 0.053137 0.944992 0.000702 0.001170
 0.001170 0.000702 0.996959 0.001170
 0.815416 0.000702 0.000702 0.183181
 0.001170 0.000702 0.000702 0.997427
 0.971443 0.000702 0.026685 0.001170
 0.001170 0.000702 0.996959 0.001170

MOTIF 5-AAAATACC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 57 P= 3.5e-001
 0.928178 0.000669 0.028416 0.042736
 0.848633 0.025415 0.124836 0.001116
 0.810522 0.000669 0.149461 0.039347
 0.798700 0.000669 0.000669 0.199961
 0.001116 0.025415 0.000669 0.972800
 0.848433 0.100131 0.050320 0.001116
 0.001116 0.863276 0.000669 0.134939
 0.001116 0.972354 0.025415 0.001116

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG10267.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG10267/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.60 seconds
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