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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.317 C 0.183 G 0.183 T 0.317 

MOTIF 1-AATATTTT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 74 P= 1.4e-001
 0.960269 0.001373 0.035985 0.002372
 0.857569 0.005645 0.001373 0.135413
 0.002372 0.095086 0.113194 0.789347
 0.987170 0.009085 0.001373 0.002372
 0.042753 0.042908 0.009917 0.904421
 0.002372 0.022866 0.077472 0.897290
 0.100480 0.006090 0.001373 0.892056
 0.121659 0.017661 0.001373 0.859307

MOTIF 2-GGTAAATA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 43 P= 2.4e-001
 0.148849 0.115684 0.734161 0.001306
 0.093191 0.029349 0.876153 0.001306
 0.001306 0.091663 0.032818 0.874213
 0.997181 0.000756 0.000756 0.001306
 0.939995 0.029349 0.029349 0.001306
 0.882716 0.000756 0.057943 0.058585
 0.001306 0.086952 0.000756 0.910986
 0.997181 0.000756 0.000756 0.001306

MOTIF 3-GCAAACAW STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 46 P= 3.3e-001
 0.001492 0.000863 0.996153 0.001492
 0.001492 0.841490 0.000863 0.156155
 0.971563 0.026082 0.000863 0.001492
 0.996782 0.000863 0.000863 0.001492
 0.782496 0.066156 0.019166 0.132181
 0.001492 0.996153 0.000863 0.001492
 0.867150 0.000863 0.000863 0.131124
 0.448977 0.098907 0.038692 0.413424

MOTIF 4-AGGTTTAW STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 5.0e-001
 0.991893 0.002175 0.002175 0.003757
 0.003757 0.002175 0.990311 0.003757
 0.003757 0.002175 0.990311 0.003757
 0.085992 0.002175 0.002175 0.909659
 0.003757 0.084409 0.002175 0.909659
 0.085992 0.002175 0.166908 0.744926
 0.991893 0.002175 0.002175 0.003757
 0.251256 0.166908 0.084409 0.497428

MOTIF 5-ATTTAAGA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 13 P= 1.0e+000
 0.673089 0.321194 0.002096 0.003621
 0.003621 0.081357 0.002096 0.912925
 0.003621 0.034908 0.081357 0.880114
 0.003621 0.002096 0.002096 0.992186
 0.992186 0.002096 0.002096 0.003621
 0.912925 0.002096 0.081357 0.003621
 0.003621 0.002096 0.990661 0.003621
 0.992186 0.002096 0.002096 0.003621

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG10209.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_CG10209/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n06.farnam.hpc.yale.internal
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FINALTIME:	1.64 seconds
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