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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.295 C 0.204 G 0.204 T 0.295 

MOTIF 1-TGACGTCA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 59 P= 2.5e-002
 0.000673 0.016341 0.000466 0.982520
 0.016484 0.000466 0.799397 0.183653
 0.902818 0.024163 0.032087 0.040932
 0.000673 0.982364 0.000466 0.016497
 0.016497 0.000466 0.982364 0.000673
 0.040932 0.032087 0.024163 0.902818
 0.183653 0.799397 0.000466 0.016484
 0.982520 0.000466 0.016341 0.000673

MOTIF 2-GTAAATAA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 71 P= 1.6e-001
 0.001018 0.000705 0.997258 0.001018
 0.001018 0.264073 0.000705 0.734204
 0.901859 0.048561 0.000705 0.048875
 0.800771 0.000705 0.016631 0.181893
 0.886983 0.016631 0.095367 0.001018
 0.097041 0.072624 0.000705 0.829631
 0.997572 0.000705 0.000705 0.001018
 0.771356 0.130403 0.053758 0.044483

MOTIF 3-AACAAATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 53 P= 8.8e-001
 0.997119 0.000836 0.000836 0.001208
 0.868940 0.081337 0.048515 0.001208
 0.001208 0.838763 0.034076 0.125952
 0.906381 0.091574 0.000836 0.001208
 0.940424 0.029184 0.029184 0.001208
 0.860263 0.103309 0.000836 0.035591
 0.163766 0.000836 0.032622 0.802775
 0.911803 0.086152 0.000836 0.001208

MOTIF 4-GAGRGGGA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 1.0e+000
 0.083901 0.001212 0.913136 0.001751
 0.772848 0.001212 0.207185 0.018755
 0.001751 0.001212 0.995286 0.001751
 0.625287 0.001212 0.371750 0.001751
 0.125109 0.001212 0.707030 0.166649
 0.001751 0.001212 0.995286 0.001751
 0.001751 0.001212 0.995286 0.001751
 0.872467 0.001212 0.001212 0.125109

MOTIF 5-ACAGAAAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 1.0e+000
 0.900777 0.013491 0.083971 0.001761
 0.001761 0.759739 0.167258 0.071242
 0.954492 0.001219 0.001219 0.043071
 0.001761 0.001219 0.995259 0.001761
 0.912916 0.084104 0.001219 0.001761
 0.871740 0.083971 0.001219 0.043071
 0.830430 0.042528 0.042528 0.084513
 0.001761 0.995259 0.001219 0.001761

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/BtbVII.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_BtbVII/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n07.farnam.hpc.yale.internal
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FINALTIME:	1.98 seconds
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