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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.314 C 0.186 G 0.186 T 0.314 

MOTIF 1-TATCGATA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 168 P= 4.8e-006
 0.069332 0.130449 0.000266 0.799953
 0.999019 0.000266 0.000266 0.000449
 0.000449 0.003170 0.000266 0.996115
 0.000449 0.998837 0.000266 0.000449
 0.000449 0.000266 0.998837 0.000449
 0.996115 0.000266 0.003170 0.000449
 0.000449 0.000266 0.000266 0.999019
 0.799953 0.000266 0.130449 0.069332

MOTIF 2-ACCTATCG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 42 P= 1.1e-002
 0.723147 0.000726 0.247842 0.028284
 0.138512 0.695865 0.137339 0.028284
 0.009264 0.892349 0.027785 0.070602
 0.028284 0.027785 0.005902 0.938029
 0.997322 0.000726 0.000726 0.001225
 0.001225 0.000726 0.011928 0.986120
 0.001225 0.996823 0.000726 0.001225
 0.001225 0.000726 0.969764 0.028284

MOTIF 3-AGAGATGG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 61 P= 9.5e-002
 0.847485 0.000493 0.151191 0.000831
 0.000831 0.000493 0.997845 0.000831
 0.703538 0.000493 0.240057 0.055912
 0.000831 0.000493 0.997845 0.000831
 0.629200 0.166968 0.203001 0.000831
 0.000831 0.000493 0.055544 0.943132
 0.000831 0.000493 0.997845 0.000831
 0.262017 0.000493 0.607612 0.129878

MOTIF 4-AATACCCA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 41 P= 8.3e-001
 0.897836 0.025573 0.050558 0.026032
 0.706048 0.125192 0.038026 0.130735
 0.005891 0.075463 0.075463 0.843184
 0.812813 0.050478 0.000669 0.136041
 0.043016 0.944878 0.010978 0.001128
 0.001128 0.830504 0.042557 0.125811
 0.202638 0.733084 0.010720 0.053558
 0.823123 0.050478 0.075463 0.050937

MOTIF 5-CGCACGCC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 14 P= 1.0e+000
 0.077114 0.843913 0.001978 0.076995
 0.003336 0.001978 0.991351 0.003336
 0.003336 0.917691 0.075637 0.003336
 0.992709 0.001978 0.001978 0.003336
 0.033828 0.887198 0.075637 0.003336
 0.150892 0.001978 0.843795 0.003336
 0.150892 0.770135 0.001978 0.076995
 0.225027 0.696000 0.075637 0.003336

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/BEAF-32.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_BEAF-32/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n12.farnam.hpc.yale.internal
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FINALTIME:	1.78 seconds
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