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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.288 C 0.212 G 0.212 T 0.288 

MOTIF 1-GTAAWCAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 51 P= 2.1e-001
 0.173925 0.181772 0.643134 0.001168
 0.001168 0.000859 0.000859 0.997113
 0.997113 0.000859 0.000859 0.001168
 0.878744 0.000859 0.000859 0.119537
 0.658683 0.000859 0.000859 0.339598
 0.001168 0.966111 0.031553 0.001168
 0.799968 0.000859 0.198004 0.001168
 0.743473 0.113578 0.000859 0.142089

MOTIF 2-ACTTTATG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 5.0e-001
 0.697572 0.050732 0.001503 0.250193
 0.002043 0.994412 0.001503 0.002043
 0.002043 0.001503 0.001503 0.994952
 0.022390 0.099962 0.099962 0.777687
 0.084711 0.001503 0.050653 0.863133
 0.994952 0.001503 0.001503 0.002043
 0.051193 0.001503 0.001503 0.945802
 0.002043 0.001503 0.994412 0.002043

MOTIF 3-ATCTGACG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 5.0e-001
 0.710970 0.082630 0.082630 0.123770
 0.123770 0.082630 0.001244 0.792356
 0.042384 0.750954 0.123454 0.083208
 0.042384 0.082630 0.041937 0.833049
 0.042384 0.082761 0.791778 0.083077
 0.856766 0.041937 0.018090 0.083208
 0.001691 0.995373 0.001244 0.001691
 0.001691 0.001244 0.995373 0.001691

MOTIF 4-CGTCGCAC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 1.0e+000
 0.002146 0.786600 0.001578 0.209675
 0.012022 0.001578 0.984254 0.002146
 0.053778 0.053211 0.001578 0.891433
 0.053778 0.942497 0.001578 0.002146
 0.002146 0.104843 0.787601 0.105410
 0.002146 0.994129 0.001578 0.002146
 0.684572 0.053211 0.105175 0.157042
 0.105576 0.890699 0.001578 0.002146

MOTIF 5-ATCTGGCA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 15 P= 1.0e+000
 0.800161 0.025192 0.001732 0.172915
 0.002355 0.058403 0.001732 0.937509
 0.002355 0.993557 0.001732 0.002355
 0.172915 0.001732 0.058403 0.766950
 0.002355 0.001732 0.993557 0.002355
 0.002355 0.001732 0.993557 0.002355
 0.059026 0.880216 0.001732 0.059026
 0.994180 0.001732 0.001732 0.002355

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/B-H2.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_B-H2/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c22n10.farnam.hpc.yale.internal
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FINALTIME:	1.87 seconds
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