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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.323 C 0.177 G 0.177 T 0.323 

MOTIF 1-ATATTTAC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 63 P= 1.1e-002
 0.657576 0.024945 0.316497 0.000982
 0.000982 0.000537 0.000537 0.997944
 0.722644 0.085031 0.191342 0.000982
 0.000982 0.000537 0.064036 0.934445
 0.000982 0.000537 0.113067 0.885413
 0.000982 0.000537 0.127950 0.870531
 0.997944 0.000537 0.000537 0.000982
 0.000982 0.997498 0.000537 0.000982

MOTIF 2-YAAACAAR STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 167 P= 2.3e-002
 0.000741 0.456905 0.000405 0.541949
 0.937748 0.061106 0.000405 0.000741
 0.996990 0.000405 0.001864 0.000741
 0.998449 0.000405 0.000405 0.000741
 0.000741 0.755199 0.000405 0.243655
 0.937088 0.000405 0.000405 0.062102
 0.798337 0.000405 0.000405 0.200853
 0.481217 0.103781 0.414261 0.000741

MOTIF 3-CTKATMAG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 27 P= 5.5e-002
 0.028733 0.791692 0.068316 0.111259
 0.024455 0.023508 0.023508 0.928529
 0.091702 0.001140 0.430738 0.476420
 0.952821 0.023508 0.001140 0.022530
 0.022530 0.001140 0.023508 0.952821
 0.476420 0.430738 0.001140 0.091702
 0.928529 0.023508 0.023508 0.024455
 0.111259 0.068316 0.791692 0.028733

MOTIF 4-CCGCCACK STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 5.0e-001
 0.104523 0.891793 0.001302 0.002382
 0.002382 0.993934 0.001302 0.002382
 0.104523 0.001302 0.891793 0.002382
 0.023523 0.768511 0.052372 0.155593
 0.002382 0.993934 0.001302 0.002382
 0.790733 0.001302 0.052372 0.155593
 0.104523 0.738582 0.052372 0.104523
 0.104687 0.001302 0.584217 0.309794

MOTIF 5-AGGTGGTG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 1.0e+000
 0.633952 0.147337 0.216447 0.002264
 0.002264 0.001237 0.994234 0.002264
 0.148050 0.001237 0.848448 0.002264
 0.147894 0.001237 0.001237 0.849631
 0.002264 0.001237 0.896991 0.099507
 0.002264 0.049781 0.945691 0.002264
 0.216845 0.001237 0.001237 0.780680
 0.196594 0.001237 0.799905 0.002264

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/Asciz.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_Asciz/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n09.farnam.hpc.yale.internal
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FINALTIME:	1.86 seconds
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