******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/sqz.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:7319853-7319973 1.0000 120 chrX:20725481-20725601 1.0000 120 chr3R:19174651-19174771 1.0000 120 chr3R:7282630-7282750 1.0000 120 chrX:12941139-12941259 1.0000 120 chr3L:10846847-10846967 1.0000 120 chr3R:15671259-15671379 1.0000 120 chrX:17808658-17808778 1.0000 120 chr3L:10281374-10281494 1.0000 120 chrX:11392983-11393103 1.0000 120 chr3R:10656723-10656843 1.0000 120 chr2R:18374223-18374343 1.0000 120 chr2R:25128138-25128258 1.0000 120 chrX:8522655-8522775 1.0000 120 chr2R:23800468-23800588 1.0000 120 chrX:909042-909162 1.0000 120 chr3R:16503451-16503571 1.0000 120 chr3L:10338192-10338312 1.0000 120 chr2R:17807383-17807503 1.0000 120 chr3L:8374244-8374364 1.0000 120 chr2R:19277509-19277629 1.0000 120 chrX:18933612-18933732 1.0000 120 chr3L:10279627-10279747 1.0000 120 chr2L:7546015-7546135 1.0000 120 chr3R:30414614-30414734 1.0000 120 chr3L:14681603-14681723 1.0000 120 chr3L:10276645-10276765 1.0000 120 chrX:17578958-17579078 1.0000 120 chr2R:23572597-23572717 1.0000 120 chr3R:24172449-24172569 1.0000 120 chrX:1607951-1608071 1.0000 120 chr3L:10308565-10308685 1.0000 120 chrX:7168142-7168262 1.0000 120 chr3L:17499839-17499959 1.0000 120 chr3L:6342392-6342512 1.0000 120 chr2L:8550736-8550856 1.0000 120 chr2R:10548187-10548307 1.0000 120 chr2L:4906202-4906322 1.0000 120 chr2R:10574014-10574134 1.0000 120 chr2R:25236890-25237010 1.0000 120 chr3L:10234259-10234379 1.0000 120 chr3R:19172923-19173043 1.0000 120 chr3R:13947520-13947640 1.0000 120 chr3L:14164091-14164211 1.0000 120 chr3L:4156598-4156718 1.0000 120 chr2L:5418123-5418243 1.0000 120 chr2R:15915211-15915331 1.0000 120 chrX:14867094-14867214 1.0000 120 chr3L:14592286-14592406 1.0000 120 chr2L:12566970-12567090 1.0000 120 chr2L:21795642-21795762 1.0000 120 chr3R:19174852-19174972 1.0000 120 chr3L:12107515-12107635 1.0000 120 chrX:7486424-7486544 1.0000 120 chr2R:10013714-10013834 1.0000 120 chrX:5056117-5056237 1.0000 120 chrX:18939602-18939722 1.0000 120 chr3L:10517719-10517839 1.0000 120 chr2R:14011766-14011886 1.0000 120 chr3R:19151038-19151158 1.0000 120 chr3L:15201492-15201612 1.0000 120 chrX:6702663-6702783 1.0000 120 chr3L:18850121-18850241 1.0000 120 chr3L:10809123-10809243 1.0000 120 chr2R:19419545-19419665 1.0000 120 chr3R:8686567-8686687 1.0000 120 chr2R:25236220-25236340 1.0000 120 chrX:17503180-17503300 1.0000 120 chrX:8535956-8536076 1.0000 120 chr3R:25464100-25464220 1.0000 120 chr3L:15227807-15227927 1.0000 120 chr3R:6436062-6436182 1.0000 120 chr3L:15537115-15537235 1.0000 120 chr2R:7008714-7008834 1.0000 120 chr2L:12608944-12609064 1.0000 120 chr2R:25238878-25238998 1.0000 120 chr2R:17816977-17817097 1.0000 120 chrX:13628078-13628198 1.0000 120 chrX:1105651-1105771 1.0000 120 chr3L:15540834-15540954 1.0000 120 chr2R:17621660-17621780 1.0000 120 chr3L:9038331-9038451 1.0000 120 chrX:4106386-4106506 1.0000 120 chr2R:21885902-21886022 1.0000 120 chr3R:13996194-13996314 1.0000 120 chrX:7496732-7496852 1.0000 120 chr3R:21586236-21586356 1.0000 120 chr2L:9972753-9972873 1.0000 120 chr3L:698654-698774 1.0000 120 chr2L:15401997-15402117 1.0000 120 chr3R:17712485-17712605 1.0000 120 chr2R:18573675-18573795 1.0000 120 chr3R:11285440-11285560 1.0000 120 chr2L:521137-521257 1.0000 120 chrX:4940772-4940892 1.0000 120 chrX:6868891-6869011 1.0000 120 chr3R:16347812-16347932 1.0000 120 chr3L:6788094-6788214 1.0000 120 chr3L:5980627-5980747 1.0000 120 chr2R:14975802-14975922 1.0000 120 chr2L:12579279-12579399 1.0000 120 chr3R:24614778-24614898 1.0000 120 chr3L:6943207-6943327 1.0000 120 chr2L:1560261-1560381 1.0000 120 chr2L:4221458-4221578 1.0000 120 chr2R:10676279-10676399 1.0000 120 chr3L:11400662-11400782 1.0000 120 chrX:2964841-2964961 1.0000 120 chrX:19827903-19828023 1.0000 120 chr2L:5298065-5298185 1.0000 120 chr2L:12613158-12613278 1.0000 120 chr3R:10534792-10534912 1.0000 120 chr3R:24577711-24577831 1.0000 120 chr3R:15205521-15205641 1.0000 120 chr2R:21507137-21507257 1.0000 120 chr2R:11599752-11599872 1.0000 120 chr3R:26917756-26917876 1.0000 120 chr3R:8684483-8684603 1.0000 120 chr2L:14207165-14207285 1.0000 120 chrX:13243892-13244012 1.0000 120 chr3L:10247243-10247363 1.0000 120 chr3L:4168549-4168669 1.0000 120 chr2L:6076346-6076466 1.0000 120 chr3R:6921653-6921773 1.0000 120 chr2R:17341457-17341577 1.0000 120 chr3L:10297927-10298047 1.0000 120 chr2L:14133681-14133801 1.0000 120 chr2R:14117405-14117525 1.0000 120 chrX:1984681-1984801 1.0000 120 chr2L:11296606-11296726 1.0000 120 chr3L:17494083-17494203 1.0000 120 chr3R:21853070-21853190 1.0000 120 chrX:14209225-14209345 1.0000 120 chrX:2467090-2467210 1.0000 120 chrX:17733971-17734091 1.0000 120 chr3R:24205600-24205720 1.0000 120 chr2L:14356896-14357016 1.0000 120 chr3R:26001458-26001578 1.0000 120 chrX:19148394-19148514 1.0000 120 chrX:12260896-12261016 1.0000 120 chr2R:17829947-17830067 1.0000 120 chr3R:16545865-16545985 1.0000 120 chr3R:27558484-27558604 1.0000 120 chr2L:1271489-1271609 1.0000 120 chr3R:9603100-9603220 1.0000 120 chrX:8857180-8857300 1.0000 120 chr2L:7809353-7809473 1.0000 120 chr2R:12460135-12460255 1.0000 120 chr3L:10697686-10697806 1.0000 120 chr3L:8078138-8078258 1.0000 120 chr2R:9558034-9558154 1.0000 120 chr3L:14655653-14655773 1.0000 120 chr3L:10765239-10765359 1.0000 120 chr2L:16605323-16605443 1.0000 120 chr3R:25591038-25591158 1.0000 120 chr2R:8183888-8184008 1.0000 120 chr3R:24846351-24846471 1.0000 120 chr3R:24773583-24773703 1.0000 120 chr2R:19372177-19372297 1.0000 120 chr2R:11452914-11453034 1.0000 120 chr3L:6342593-6342713 1.0000 120 chr2L:10749780-10749900 1.0000 120 chr3R:12362099-12362219 1.0000 120 chrX:5192689-5192809 1.0000 120 chr2L:12686948-12687068 1.0000 120 chr3R:8879002-8879122 1.0000 120 chr2R:19257653-19257773 1.0000 120 chrX:2283628-2283748 1.0000 120 chrX:3349768-3349888 1.0000 120 chr2R:16211962-16212082 1.0000 120 chr3L:8569614-8569734 1.0000 120 chr2R:18664284-18664404 1.0000 120 chr2L:1658376-1658496 1.0000 120 chr3L:19199784-19199904 1.0000 120 chr3L:6807133-6807253 1.0000 120 chr2R:25239622-25239742 1.0000 120 chr2L:3426770-3426890 1.0000 120 chr2R:21548083-21548203 1.0000 120 chr3L:6449309-6449429 1.0000 120 chr3L:10309655-10309775 1.0000 120 chrX:10264002-10264122 1.0000 120 chrX:10536366-10536486 1.0000 120 chrX:3349970-3350090 1.0000 120 chrX:17076565-17076685 1.0000 120 chr2R:21714049-21714169 1.0000 120 chr2L:14121119-14121239 1.0000 120 chrX:6004782-6004902 1.0000 120 chrX:13207327-13207447 1.0000 120 chrX:6991427-6991547 1.0000 120 chr3L:6498097-6498217 1.0000 120 chr2L:21806509-21806629 1.0000 120 chrX:3161988-3162108 1.0000 120 chrX:8418557-8418677 1.0000 120 chr3R:6934062-6934182 1.0000 120 chr2R:12960449-12960569 1.0000 120 chr2R:14918702-14918822 1.0000 120 chr3L:2584980-2585100 1.0000 120 chr3R:5717045-5717165 1.0000 120 chr2L:19217118-19217238 1.0000 120 chr3R:5322379-5322499 1.0000 120 chr2R:19153799-19153919 1.0000 120 chr3L:7818596-7818716 1.0000 120 chr3L:3079236-3079356 1.0000 120 chr2R:9711049-9711169 1.0000 120 chrX:14922999-14923119 1.0000 120 chr3L:15777185-15777305 1.0000 120 chrX:6983126-6983246 1.0000 120 chrX:8644171-8644291 1.0000 120 chr2L:2872328-2872448 1.0000 120 chr3R:13075899-13076019 1.0000 120 chrX:3140071-3140191 1.0000 120 chr3L:4719946-4720066 1.0000 120 chr2R:11398764-11398884 1.0000 120 chr3L:16166749-16166869 1.0000 120 chr3L:8860860-8860980 1.0000 120 chr3L:14153069-14153189 1.0000 120 chr3L:8833509-8833629 1.0000 120 chr3L:11421000-11421120 1.0000 120 chr3L:5655198-5655318 1.0000 120 chr3L:14158277-14158397 1.0000 120 chr3L:4360445-4360565 1.0000 120 chr2L:7293217-7293337 1.0000 120 chrX:13397741-13397861 1.0000 120 chr2R:19670586-19670706 1.0000 120 chrX:13244094-13244214 1.0000 120 chr3R:16277652-16277772 1.0000 120 chr2L:20858801-20858921 1.0000 120 chr3R:8929823-8929943 1.0000 120 chr3L:10771391-10771511 1.0000 120 chr3R:17062836-17062956 1.0000 120 chr2R:13552352-13552472 1.0000 120 chr3R:31321676-31321796 1.0000 120 chrX:9666584-9666704 1.0000 120 chr2R:8601938-8602058 1.0000 120 chr3L:3965358-3965478 1.0000 120 chr2L:12006061-12006181 1.0000 120 chr3R:23131058-23131178 1.0000 120 chrX:2918669-2918789 1.0000 120 chrX:8295961-8296081 1.0000 120 chr2R:8635541-8635661 1.0000 120 chr3R:22150581-22150701 1.0000 120 chrX:17346208-17346328 1.0000 120 chr2L:7136718-7136838 1.0000 120 chr2R:14128665-14128785 1.0000 120 chrX:9122900-9123020 1.0000 120 chr3L:10346425-10346545 1.0000 120 chr3L:7788172-7788292 1.0000 120 chr3L:732694-732814 1.0000 120 chr2L:12674533-12674653 1.0000 120 chr3L:21194556-21194676 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_sqz/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/sqz.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.313 C 0.199 G 0.194 T 0.295 Background letter frequencies (from file dataset with add-one prior applied): A 0.313 C 0.199 G 0.194 T 0.295 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF AAAAAAAA MEME-1 width = 8 sites = 153 llr = 1247 E-value = 1.9e-132 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A a8aaaaa9 pos.-specific C :1:::::: probability G :::::::: matrix T :1:::::1 bits 2.4 2.1 1.9 1.7 * *** Relative 1.4 * ***** Entropy 1.2 * ****** (11.8 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAAAAAAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:21194556-21194676 74 9.21e-05 GGCGAGCTTA AAAAAAAA CGTAAACAAA chr3L:732694-732814 26 9.21e-05 CAACATTCCa aaaaaaaa aaaaaaaaaa chrX:9122900-9123020 86 9.21e-05 AGGCTAACAC aaaaaaaa atattaaatt chr2L:7136718-7136838 56 9.21e-05 CCCTATCCAA AAAAAAAA TACACAAAAG chrX:2918669-2918789 12 9.21e-05 AACAAATAAA AAAAAAAA GTTACGAGAT chr3R:23131058-23131178 97 9.21e-05 aaaaaactga aaaaaaaa TTAGTGTCGA chr3L:3965358-3965478 47 9.21e-05 CCTTTCCGAA AAAAAAAA ATGAACCCGA chr2R:8601938-8602058 62 9.21e-05 GGGTCGTGGA AAAAAAAA CAACCATATC chr3R:31321676-31321796 80 9.21e-05 aaaaaaaaga aaaaaaaa CGACTGACGG chr2R:13552352-13552472 62 9.21e-05 CTTTCGATGC AAAAAAAA AACTGGTCAA chr3L:10771391-10771511 10 9.21e-05 AAGAAGCGG AAAAAAAA GAAAGGCCAC chr3R:8929823-8929943 60 9.21e-05 ACAGAAACAT AAAAAAAA ACGTCTTGAA chrX:13244094-13244214 22 9.21e-05 GTCAACACGA AAAAAAAA ATGTGAAAAA chrX:13397741-13397861 90 9.21e-05 ACCAAAAAAG AAAAAAAA CAGCGATAAG chr2L:7293217-7293337 109 9.21e-05 Caaaaaacaa aaaaaaaa aaga chr3L:14153069-14153189 56 9.21e-05 CGAACAAAGC AAAAAAAA CAACGTAACG chr3L:8860860-8860980 53 9.21e-05 aaaaaattaa aaaaaaaa aaaCAGATCA chr3L:16166749-16166869 19 9.21e-05 AAATACATTA AAAAAAAA TAAAAGAATT chr2R:11398764-11398884 34 9.21e-05 ACACAACCGA AAAAAAAA GAAACGAAGA chrX:8644171-8644291 85 9.21e-05 ATAAAAGAAA AAAAAAAA GAACACAGCG chrX:14922999-14923119 24 9.21e-05 ATCAAAAAAA AAAAAAAA TTCCACTGTA chr3L:3079236-3079356 76 9.21e-05 TTGGCCAACG AAAAAAAA ACCGCTCAGC chr3L:7818596-7818716 47 9.21e-05 TCCAGCTGAG AAAAAAAA AAATGTTAAA chr2R:19153799-19153919 62 9.21e-05 TCTGGTCCaa aaaaaaaa aaaaacaaaa chr3R:5717045-5717165 76 9.21e-05 GTTTTTCGGT AAAAAAAA ATGCGAAAGA chr3L:2584980-2585100 48 9.21e-05 GGAAATCCAG AAAAAAAA ACCTTTTTTC chr3R:6934062-6934182 91 9.21e-05 CACACaaaaa aaaaaaaa taaataaaaa chrX:8418557-8418677 70 9.21e-05 aaaaaaaaat aaaaaaaa aGCCAGCCCC chrX:3161988-3162108 20 9.21e-05 CATGGACACA AAAAAAAA CCGACCAAGC chrX:13207327-13207447 61 9.21e-05 GCGTGTTGAA AAAAAAAA CAACGAGGGA chrX:6004782-6004902 92 9.21e-05 GACCAAAAAC AAAAAAAA ATAAAATCAA chrX:10536366-10536486 38 9.21e-05 TGCCACAAAA AAAAAAAA AACAGAAGCA chr3L:10309655-10309775 112 9.21e-05 accaaaaacg aaaaaaaa a chr3L:19199784-19199904 41 9.21e-05 GCAACCAACG AAAAAAAA AACTTTTTTG chr2R:16211962-16212082 73 9.21e-05 GCATAAATAC AAAAAAAA TCATTTCAAT chrX:2283628-2283748 39 9.21e-05 GGGGAGGGCG AAAAAAAA GCGAAAGTAT chr2R:19257653-19257773 40 9.21e-05 AAGGAATCCC AAAAAAAA CCTGCATCTT chrX:5192689-5192809 46 9.21e-05 aaaaaatata aaaaaaaa gaaaagaaca chr2L:10749780-10749900 76 9.21e-05 AAAAACCCAA AAAAAAAA AAGAATTGAG chr3L:6342593-6342713 79 9.21e-05 CAAAACTGAA AAAAAAAA TAACAGAGGC chr2R:19372177-19372297 64 9.21e-05 CTTAATATTC AAAAAAAA AAAAAATGTG chr3R:24773583-24773703 6 9.21e-05 GAAAA AAAAAAAA CGGCTACTAC chr3R:24846351-24846471 8 9.21e-05 Caaaaaa aaaaaaaa aaaCAGAAGC chr3R:25591038-25591158 62 9.21e-05 GGCACACAAA AAAAAAAA GAGGAAAAAA chr2L:16605323-16605443 103 9.21e-05 TGGCCGAAAG AAAAAAAA AAGTGAAGAC chr3L:8078138-8078258 76 9.21e-05 TAAATAAGAC AAAAAAAA AAACTCAGCA chr2R:12460135-12460255 1 9.21e-05 . AAAAAAAA CAGCGTCTGG chr2L:7809353-7809473 18 9.21e-05 TAAGGTCGTC AAAAAAAA ATGCGATAGA chrX:8857180-8857300 66 9.21e-05 GACAAAAGAA AAAAAAAA AGCAGCTAAA chr3R:9603100-9603220 75 9.21e-05 AATGCCCTGG AAAAAAAA GGGGGTTGTC chr3R:27558484-27558604 26 9.21e-05 GGTACCAAAC AAAAAAAA TAGGAAAAAA chrX:12260896-12261016 85 9.21e-05 aaaaaaagaa aaaaaaaa CCGGAACCCT chrX:19148394-19148514 6 9.21e-05 AGCCG AAAAAAAA ATACTGAAAT chr3R:24205600-24205720 83 9.21e-05 CCCGGACAGA AAAAAAAA AGTTCACATT chrX:17733971-17734091 9 9.21e-05 CTGaaaga aaaaaaaa aaaaaaCACC chrX:2467090-2467210 23 9.21e-05 TAGCaaaaaa aaaaaaaa aaaaaaaaat chrX:14209225-14209345 81 9.21e-05 TCTCGACCAA AAAAAAAA CCATAGATTA chr3R:21853070-21853190 98 9.21e-05 TTGCACAACA AAAAAAAA ACGCGTTTTG chr2L:11296606-11296726 17 9.21e-05 TTTGAAATAC AAAAAAAA AAAAACGCAT chr2R:14117405-14117525 104 9.21e-05 taaacaaaaa aaaaaaaa ctaagaaaa chr3L:10297927-10298047 43 9.21e-05 TCTCTGGCCA AAAAAAAA AGCACTTTCT chr3R:6921653-6921773 1 9.21e-05 . AAAAAAAA AAAAAACATT chr3L:4168549-4168669 40 9.21e-05 CGAAAGTGGT aaaaaaaa gtgaaaaaag chr2L:14207165-14207285 26 9.21e-05 CTGGCATAGG AAAAAAAA AACGGTCGAA chr3R:26917756-26917876 1 9.21e-05 . AAAAAAAA CACCTCATAA chr2R:21507137-21507257 39 9.21e-05 gctgctgcCC AAAAAAAA AAAAACAATA chr3R:10534792-10534912 8 9.21e-05 CGGTTGG AAAAAAAA TGAAGTGTGG chrX:19827903-19828023 89 9.21e-05 AGCCACCCCG AAAAAAAA GTAAAAATGC chrX:2964841-2964961 86 9.21e-05 AATATACAAA AAAAAAAA CCCATTTTAA chr3L:11400662-11400782 4 9.21e-05 CTA AAAAAAAA GGAGTTGCTG chr2R:10676279-10676399 64 9.21e-05 ATACAGCCGA AAAAAAAA ACAGTCAGAT chr2L:12579279-12579399 11 9.21e-05 ATGGATCTAA AAAAAAAA GCTAAGACCG chrX:4940772-4940892 86 9.21e-05 GTGAGTGAGA AAAAAAAA TGAAGGAAAA chr2L:521137-521257 57 9.21e-05 AATAACCCCA AAAAAAAA TAAGCAACAA chr3R:17712485-17712605 36 9.21e-05 CTCTCGAAAT AAAAAAAA CACAAAGCGC chr2L:9972753-9972873 99 9.21e-05 GAGACCGCAA AAAAAAAA GGTCGTCTGA chr3R:21586236-21586356 51 9.21e-05 caaccaacaa aaaaaaaa aagaaaaaat chrX:7496732-7496852 72 9.21e-05 AAATGATCAG AAAAAAAA ACATAAAAAA chr2R:21885902-21886022 1 9.21e-05 . aaaaaaaa aaaaCAGAGA chr3L:9038331-9038451 85 9.21e-05 CTGGGGATAA AAAAAAAA CAGTGAAGAT chr2R:17621660-17621780 36 9.21e-05 GTGGCTGGCC AAAAAAAA TGAAAACAAA chr3L:15540834-15540954 32 9.21e-05 CCCGAGGCAG AAAAAAAA GCGCGCATAA chrX:13628078-13628198 73 9.21e-05 CCACAAAAAA AAAAAAAA AATACCAAAT chr2R:25238878-25238998 71 9.21e-05 GATCTAGACA AAAAAAAA TACAGTAAAA chr3L:15537115-15537235 62 9.21e-05 AATGTAAAAA AAAAAAAA ATAACCGTAT chr3R:6436062-6436182 61 9.21e-05 AAAGTTTATG AAAAAAAA ATCCCTAAAA chr3L:15227807-15227927 60 9.21e-05 CTCCCaaaca aaaaaaaa aaaaaacaaa chr3R:25464100-25464220 4 9.21e-05 ACC AAAAAAAA CTCATTATGT chrX:8535956-8536076 14 9.21e-05 TAGGACAAAG AAAAAAAA CTTACGCCGT chrX:17503180-17503300 101 9.21e-05 ccaaaccaaa aaaaaaaa aaaataaaac chr2R:25236220-25236340 49 9.21e-05 ATCAAGGGAG AAAAAAAA CGACCCCACG chrX:6702663-6702783 42 9.21e-05 CACACGGTGG AAAAAAAA CAAGgcaaca chr3L:15201492-15201612 92 9.21e-05 CCTTTCAGAA AAAAAAAA ACTACAATCC chrX:5056117-5056237 72 9.21e-05 aaaaaaagaa aaaaaaaa cgaaaaaaga chr2R:10013714-10013834 47 9.21e-05 GCAAAAGGCA AAAAAAAA AACATTGGGT chr2R:15915211-15915331 32 9.21e-05 CCAAATCCGG AAAAAAAA TAAACCGAAA chr3L:4156598-4156718 51 9.21e-05 TCTTACCCAA AAAAAAAA AAAAACTCGA chr3L:14164091-14164211 7 9.21e-05 gaaaga aaaaaaaa aCGCAACAAA chr3R:13947520-13947640 38 9.21e-05 aaacgattcc aaaaaaaa aaaaaaaaaa chr2R:10548187-10548307 10 9.21e-05 aaaaagaag aaaaaaaa aCAGTGAAAC chrX:7168142-7168262 30 9.21e-05 GAACTAATAG AAAAAAAA AACTACGCAG chr3R:24172449-24172569 42 9.21e-05 AGTCATaaac aaaaaaaa aaaaaaaaCT chrX:17578958-17579078 29 9.21e-05 ACAACAACGC AAAAAAAA AACGGAAAAA chrX:18933612-18933732 4 9.21e-05 aaa aaaaaaaa aaatagaaaa chr2R:19277509-19277629 80 9.21e-05 TTTTCCGCCA AAAAAAAA AAAAGAGAAA chr3L:8374244-8374364 1 9.21e-05 . AAAAAAAA TATATAAAAA chr3R:16503451-16503571 38 9.21e-05 CAAAAACACG AAAAAAAA TGCTCGGCTA chrX:909042-909162 82 9.21e-05 CCCGCGGCAA AAAAAAAA CACAGTTAGT chr2R:25128138-25128258 90 9.21e-05 TAAAAAAACG AAAAAAAA TTACGGGCTG chr3R:10656723-10656843 53 9.21e-05 GTCCCaaaaa aaaaaaaa aatgagaaaa chr3L:10281374-10281494 9 9.21e-05 CGAAACGA AAAAAAAA AAACTTTGGA chr3R:15671259-15671379 23 9.21e-05 ACCGCAGCCA AAAAAAAA GGATAATAAT chr3L:10846847-10846967 78 9.21e-05 ACCTCTGGCA AAAAAAAA AAGGTTCGAA chrX:12941139-12941259 35 9.21e-05 aaaaaaaaca aaaaaaaa GTGTGAGAGA chrX:8295961-8296081 68 1.51e-04 ttttaggcgt acaaaaaa tgagaactgc chrX:3140071-3140191 113 1.51e-04 GTACAACAAA ACAAAAAA chr3L:15777185-15777305 94 1.51e-04 CGCTGACAGC ACAAAAAA TAGGGAATAA chr2L:19217118-19217238 53 1.51e-04 CATAAATTAA ACAAAAAA ATGGTGCACA chr2R:17816977-17817097 38 1.51e-04 CAAAGTGTTA ACAAAAAA TTGACGCTTT chr3R:19174651-19174771 48 1.51e-04 CGGAAACTGA ACAAAAAA ATGGGTTAAA chrX:20725481-20725601 24 1.51e-04 AGGCGCGCAC ACAAAAAA AGGGGTTCCG chr3L:4719946-4720066 18 2.38e-04 AAGCCGCAAG AAAAAAAT ATTTGACCTA chr2R:14918702-14918822 69 2.38e-04 ATTTCCGTGG AAAAAAAT CAGGCTCATT chr2R:12960449-12960569 88 2.38e-04 TTTTTTATTC AAAAAAAT TGAGCACAAG chr2L:12686948-12687068 87 2.38e-04 ACGAATCTCT AAAAAAAT GATAGAGTTG chr3L:10697686-10697806 98 2.38e-04 CAAGCATAAG AAAAAAAT TGAGAATAAG chrX:6868891-6869011 41 2.38e-04 GAAAACATCT AAAAAAAT TATCACgtgt chrX:7486424-7486544 102 2.38e-04 GAAATTAAAT AAAAAAAT ATTTTTTTTT chr3L:17499839-17499959 95 2.38e-04 TCGATGTGTC AAAAAAAT ACAGCTTTTT chr3R:7282630-7282750 40 2.38e-04 AAAAACGCGG AAAAAAAT TGTGTAAAAA chr2R:14128665-14128785 13 3.24e-04 CTAAAGAGCC ATAAAAAA AGGGAATAAC chr2R:17341457-17341577 84 3.24e-04 TTTTCTAACA ATAAAAAA TTGCCCATGC chr3L:10247243-10247363 9 3.24e-04 TTCGAGCC ATAAAAAA TTCGCACATG chr3R:13996194-13996314 77 3.24e-04 GGGGAACGGC ATAAAAAA TGGTTGGGTT chr2R:23800468-23800588 45 3.24e-04 CGAATCTGCC ATAAAAAA GTTAACAGAT chr2R:11452914-11453034 50 3.83e-04 TAAAAGCAAA AAACAAAA CCCACATGAG chr2R:25239622-25239742 54 4.40e-04 AGGGGACATT GAAAAAAA GGTGCCACCC chrX:11392983-11393103 19 4.40e-04 AGAAGTAAGA GAAAAAAA CCGATTGTAG chr2R:17829947-17830067 57 4.97e-04 ACGAATCGAG AGAAAAAA CTGAGTATAA chrX:8522655-8522775 70 4.97e-04 ACACCCAGTG AGAAAAAA TTTGTATGAC chr2R:19670586-19670706 42 5.52e-04 TATCGACTTT ACAAAAAT AAAAATCGTT chr2L:4221458-4221578 85 5.52e-04 ACATATAGCC ACAAAAAT GGGTAAACTT chr3L:6943207-6943327 111 5.52e-04 GTTGGCGGCa acaaaaat aa chr2L:4906202-4906322 11 5.52e-04 AAGCGTAAAT ACAAAAAT CCACAACGGC chr2L:2872328-2872448 89 5.90e-04 CAAACTACAA ACACAAAA GCATGCGGTA chrX:6991427-6991547 91 5.90e-04 AAAATACCTC ACACAAAA TAACTGTTTT chrX:3349970-3350090 77 5.90e-04 CACAAAATAC ACACAAAA TGTCTTTTAT chr2R:14011766-14011886 12 5.90e-04 aaacatatat acaCAAAA TAATAATGAG chr3L:14158277-14158397 50 7.08e-04 CGGCAGGCAC ATAAAAAT TTATTTCGAA chr3R:8684483-8684603 52 7.94e-04 GGAATAGCCT AAAAAATA TTCGAAAGGG chrX:6983126-6983246 77 9.59e-04 ACTTTCGGGC ATACAAAA ACGAAATCAA chr3L:10346425-10346545 59 1.01e-03 TCTTGAATAA GTAAAAAA CGAAAGGACT chr2L:12566970-12567090 82 1.01e-03 GCATAAAGTC GTAAAAAA CGTATTTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:21194556-21194676 9.2e-05 73_[+1]_39 chr3L:732694-732814 9.2e-05 25_[+1]_87 chrX:9122900-9123020 9.2e-05 85_[+1]_27 chr2L:7136718-7136838 9.2e-05 55_[+1]_57 chrX:2918669-2918789 9.2e-05 11_[+1]_101 chr3R:23131058-23131178 9.2e-05 96_[+1]_16 chr3L:3965358-3965478 9.2e-05 46_[+1]_66 chr2R:8601938-8602058 9.2e-05 61_[+1]_51 chr3R:31321676-31321796 9.2e-05 79_[+1]_33 chr2R:13552352-13552472 9.2e-05 61_[+1]_51 chr3L:10771391-10771511 9.2e-05 9_[+1]_103 chr3R:8929823-8929943 9.2e-05 59_[+1]_53 chrX:13244094-13244214 9.2e-05 21_[+1]_91 chrX:13397741-13397861 9.2e-05 89_[+1]_23 chr2L:7293217-7293337 9.2e-05 108_[+1]_4 chr3L:14153069-14153189 9.2e-05 55_[+1]_57 chr3L:8860860-8860980 9.2e-05 52_[+1]_60 chr3L:16166749-16166869 9.2e-05 18_[+1]_94 chr2R:11398764-11398884 9.2e-05 33_[+1]_79 chrX:8644171-8644291 9.2e-05 84_[+1]_28 chrX:14922999-14923119 9.2e-05 23_[+1]_89 chr3L:3079236-3079356 9.2e-05 75_[+1]_37 chr3L:7818596-7818716 9.2e-05 46_[+1]_66 chr2R:19153799-19153919 9.2e-05 61_[+1]_51 chr3R:5717045-5717165 9.2e-05 75_[+1]_37 chr3L:2584980-2585100 9.2e-05 47_[+1]_65 chr3R:6934062-6934182 9.2e-05 90_[+1]_22 chrX:8418557-8418677 9.2e-05 69_[+1]_43 chrX:3161988-3162108 9.2e-05 19_[+1]_93 chrX:13207327-13207447 9.2e-05 60_[+1]_52 chrX:6004782-6004902 9.2e-05 91_[+1]_21 chrX:10536366-10536486 9.2e-05 37_[+1]_75 chr3L:10309655-10309775 9.2e-05 111_[+1]_1 chr3L:19199784-19199904 9.2e-05 40_[+1]_72 chr2R:16211962-16212082 9.2e-05 72_[+1]_40 chrX:2283628-2283748 9.2e-05 38_[+1]_74 chr2R:19257653-19257773 9.2e-05 39_[+1]_73 chrX:5192689-5192809 9.2e-05 45_[+1]_67 chr2L:10749780-10749900 9.2e-05 75_[+1]_37 chr3L:6342593-6342713 9.2e-05 78_[+1]_34 chr2R:19372177-19372297 9.2e-05 63_[+1]_49 chr3R:24773583-24773703 9.2e-05 5_[+1]_107 chr3R:24846351-24846471 9.2e-05 7_[+1]_105 chr3R:25591038-25591158 9.2e-05 61_[+1]_51 chr2L:16605323-16605443 9.2e-05 102_[+1]_10 chr3L:8078138-8078258 9.2e-05 75_[+1]_37 chr2R:12460135-12460255 9.2e-05 [+1]_112 chr2L:7809353-7809473 9.2e-05 17_[+1]_95 chrX:8857180-8857300 9.2e-05 65_[+1]_47 chr3R:9603100-9603220 9.2e-05 74_[+1]_38 chr3R:27558484-27558604 9.2e-05 25_[+1]_87 chrX:12260896-12261016 9.2e-05 84_[+1]_28 chrX:19148394-19148514 9.2e-05 5_[+1]_107 chr3R:24205600-24205720 9.2e-05 82_[+1]_30 chrX:17733971-17734091 9.2e-05 8_[+1]_104 chrX:2467090-2467210 9.2e-05 22_[+1]_90 chrX:14209225-14209345 9.2e-05 80_[+1]_32 chr3R:21853070-21853190 9.2e-05 97_[+1]_15 chr2L:11296606-11296726 9.2e-05 16_[+1]_96 chr2R:14117405-14117525 9.2e-05 103_[+1]_9 chr3L:10297927-10298047 9.2e-05 42_[+1]_70 chr3R:6921653-6921773 9.2e-05 [+1]_112 chr3L:4168549-4168669 9.2e-05 39_[+1]_73 chr2L:14207165-14207285 9.2e-05 25_[+1]_87 chr3R:26917756-26917876 9.2e-05 [+1]_112 chr2R:21507137-21507257 9.2e-05 38_[+1]_74 chr3R:10534792-10534912 9.2e-05 7_[+1]_105 chrX:19827903-19828023 9.2e-05 88_[+1]_24 chrX:2964841-2964961 9.2e-05 85_[+1]_27 chr3L:11400662-11400782 9.2e-05 3_[+1]_109 chr2R:10676279-10676399 9.2e-05 63_[+1]_49 chr2L:12579279-12579399 9.2e-05 10_[+1]_102 chrX:4940772-4940892 9.2e-05 85_[+1]_27 chr2L:521137-521257 9.2e-05 56_[+1]_56 chr3R:17712485-17712605 9.2e-05 35_[+1]_77 chr2L:9972753-9972873 9.2e-05 98_[+1]_14 chr3R:21586236-21586356 9.2e-05 50_[+1]_62 chrX:7496732-7496852 9.2e-05 71_[+1]_41 chr2R:21885902-21886022 9.2e-05 [+1]_112 chr3L:9038331-9038451 9.2e-05 84_[+1]_28 chr2R:17621660-17621780 9.2e-05 35_[+1]_77 chr3L:15540834-15540954 9.2e-05 31_[+1]_81 chrX:13628078-13628198 9.2e-05 72_[+1]_40 chr2R:25238878-25238998 9.2e-05 70_[+1]_42 chr3L:15537115-15537235 9.2e-05 61_[+1]_51 chr3R:6436062-6436182 9.2e-05 60_[+1]_52 chr3L:15227807-15227927 9.2e-05 59_[+1]_53 chr3R:25464100-25464220 9.2e-05 3_[+1]_109 chrX:8535956-8536076 9.2e-05 13_[+1]_99 chrX:17503180-17503300 9.2e-05 100_[+1]_12 chr2R:25236220-25236340 9.2e-05 48_[+1]_64 chrX:6702663-6702783 9.2e-05 41_[+1]_71 chr3L:15201492-15201612 9.2e-05 91_[+1]_21 chrX:5056117-5056237 9.2e-05 71_[+1]_41 chr2R:10013714-10013834 9.2e-05 46_[+1]_66 chr2R:15915211-15915331 9.2e-05 31_[+1]_81 chr3L:4156598-4156718 9.2e-05 50_[+1]_62 chr3L:14164091-14164211 9.2e-05 6_[+1]_106 chr3R:13947520-13947640 9.2e-05 37_[+1]_75 chr2R:10548187-10548307 9.2e-05 9_[+1]_103 chrX:7168142-7168262 9.2e-05 29_[+1]_83 chr3R:24172449-24172569 9.2e-05 41_[+1]_71 chrX:17578958-17579078 9.2e-05 28_[+1]_84 chrX:18933612-18933732 9.2e-05 3_[+1]_109 chr2R:19277509-19277629 9.2e-05 79_[+1]_33 chr3L:8374244-8374364 9.2e-05 [+1]_112 chr3R:16503451-16503571 9.2e-05 37_[+1]_75 chrX:909042-909162 9.2e-05 81_[+1]_31 chr2R:25128138-25128258 9.2e-05 89_[+1]_23 chr3R:10656723-10656843 9.2e-05 52_[+1]_60 chr3L:10281374-10281494 9.2e-05 8_[+1]_104 chr3R:15671259-15671379 9.2e-05 22_[+1]_90 chr3L:10846847-10846967 9.2e-05 77_[+1]_35 chrX:12941139-12941259 9.2e-05 34_[+1]_78 chrX:8295961-8296081 0.00015 67_[+1]_45 chrX:3140071-3140191 0.00015 112_[+1] chr3L:15777185-15777305 0.00015 93_[+1]_19 chr2L:19217118-19217238 0.00015 52_[+1]_60 chr2R:17816977-17817097 0.00015 37_[+1]_75 chr3R:19174651-19174771 0.00015 47_[+1]_65 chrX:20725481-20725601 0.00015 23_[+1]_89 chr3L:4719946-4720066 0.00024 17_[+1]_95 chr2R:14918702-14918822 0.00024 68_[+1]_44 chr2R:12960449-12960569 0.00024 87_[+1]_25 chr2L:12686948-12687068 0.00024 86_[+1]_26 chr3L:10697686-10697806 0.00024 97_[+1]_15 chrX:6868891-6869011 0.00024 40_[+1]_72 chrX:7486424-7486544 0.00024 101_[+1]_11 chr3L:17499839-17499959 0.00024 94_[+1]_18 chr3R:7282630-7282750 0.00024 39_[+1]_73 chr2R:14128665-14128785 0.00032 12_[+1]_100 chr2R:17341457-17341577 0.00032 83_[+1]_29 chr3L:10247243-10247363 0.00032 8_[+1]_104 chr3R:13996194-13996314 0.00032 76_[+1]_36 chr2R:23800468-23800588 0.00032 44_[+1]_68 chr2R:11452914-11453034 0.00038 49_[+1]_63 chr2R:25239622-25239742 0.00044 53_[+1]_59 chrX:11392983-11393103 0.00044 18_[+1]_94 chr2R:17829947-17830067 0.0005 56_[+1]_56 chrX:8522655-8522775 0.0005 69_[+1]_43 chr2R:19670586-19670706 0.00055 41_[+1]_71 chr2L:4221458-4221578 0.00055 84_[+1]_28 chr3L:6943207-6943327 0.00055 110_[+1]_2 chr2L:4906202-4906322 0.00055 10_[+1]_102 chr2L:2872328-2872448 0.00059 88_[+1]_24 chrX:6991427-6991547 0.00059 90_[+1]_22 chrX:3349970-3350090 0.00059 76_[+1]_36 chr2R:14011766-14011886 0.00059 11_[+1]_101 chr3L:14158277-14158397 0.00071 49_[+1]_63 chr3R:8684483-8684603 0.00079 51_[+1]_61 chrX:6983126-6983246 0.00096 76_[+1]_36 chr3L:10346425-10346545 0.001 58_[+1]_54 chr2L:12566970-12567090 0.001 81_[+1]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAAAAA width=8 seqs=153 chr3L:21194556-21194676 ( 74) AAAAAAAA 1 chr3L:732694-732814 ( 26) AAAAAAAA 1 chrX:9122900-9123020 ( 86) AAAAAAAA 1 chr2L:7136718-7136838 ( 56) AAAAAAAA 1 chrX:2918669-2918789 ( 12) AAAAAAAA 1 chr3R:23131058-23131178 ( 97) AAAAAAAA 1 chr3L:3965358-3965478 ( 47) AAAAAAAA 1 chr2R:8601938-8602058 ( 62) AAAAAAAA 1 chr3R:31321676-31321796 ( 80) AAAAAAAA 1 chr2R:13552352-13552472 ( 62) AAAAAAAA 1 chr3L:10771391-10771511 ( 10) AAAAAAAA 1 chr3R:8929823-8929943 ( 60) AAAAAAAA 1 chrX:13244094-13244214 ( 22) AAAAAAAA 1 chrX:13397741-13397861 ( 90) AAAAAAAA 1 chr2L:7293217-7293337 ( 109) AAAAAAAA 1 chr3L:14153069-14153189 ( 56) AAAAAAAA 1 chr3L:8860860-8860980 ( 53) AAAAAAAA 1 chr3L:16166749-16166869 ( 19) AAAAAAAA 1 chr2R:11398764-11398884 ( 34) AAAAAAAA 1 chrX:8644171-8644291 ( 85) AAAAAAAA 1 chrX:14922999-14923119 ( 24) AAAAAAAA 1 chr3L:3079236-3079356 ( 76) AAAAAAAA 1 chr3L:7818596-7818716 ( 47) AAAAAAAA 1 chr2R:19153799-19153919 ( 62) AAAAAAAA 1 chr3R:5717045-5717165 ( 76) AAAAAAAA 1 chr3L:2584980-2585100 ( 48) AAAAAAAA 1 chr3R:6934062-6934182 ( 91) AAAAAAAA 1 chrX:8418557-8418677 ( 70) AAAAAAAA 1 chrX:3161988-3162108 ( 20) AAAAAAAA 1 chrX:13207327-13207447 ( 61) AAAAAAAA 1 chrX:6004782-6004902 ( 92) AAAAAAAA 1 chrX:10536366-10536486 ( 38) AAAAAAAA 1 chr3L:10309655-10309775 ( 112) AAAAAAAA 1 chr3L:19199784-19199904 ( 41) AAAAAAAA 1 chr2R:16211962-16212082 ( 73) AAAAAAAA 1 chrX:2283628-2283748 ( 39) AAAAAAAA 1 chr2R:19257653-19257773 ( 40) AAAAAAAA 1 chrX:5192689-5192809 ( 46) AAAAAAAA 1 chr2L:10749780-10749900 ( 76) AAAAAAAA 1 chr3L:6342593-6342713 ( 79) AAAAAAAA 1 chr2R:19372177-19372297 ( 64) AAAAAAAA 1 chr3R:24773583-24773703 ( 6) AAAAAAAA 1 chr3R:24846351-24846471 ( 8) AAAAAAAA 1 chr3R:25591038-25591158 ( 62) AAAAAAAA 1 chr2L:16605323-16605443 ( 103) AAAAAAAA 1 chr3L:8078138-8078258 ( 76) AAAAAAAA 1 chr2R:12460135-12460255 ( 1) AAAAAAAA 1 chr2L:7809353-7809473 ( 18) AAAAAAAA 1 chrX:8857180-8857300 ( 66) AAAAAAAA 1 chr3R:9603100-9603220 ( 75) AAAAAAAA 1 chr3R:27558484-27558604 ( 26) AAAAAAAA 1 chrX:12260896-12261016 ( 85) AAAAAAAA 1 chrX:19148394-19148514 ( 6) AAAAAAAA 1 chr3R:24205600-24205720 ( 83) AAAAAAAA 1 chrX:17733971-17734091 ( 9) AAAAAAAA 1 chrX:2467090-2467210 ( 23) AAAAAAAA 1 chrX:14209225-14209345 ( 81) AAAAAAAA 1 chr3R:21853070-21853190 ( 98) AAAAAAAA 1 chr2L:11296606-11296726 ( 17) AAAAAAAA 1 chr2R:14117405-14117525 ( 104) AAAAAAAA 1 chr3L:10297927-10298047 ( 43) AAAAAAAA 1 chr3R:6921653-6921773 ( 1) AAAAAAAA 1 chr3L:4168549-4168669 ( 40) AAAAAAAA 1 chr2L:14207165-14207285 ( 26) AAAAAAAA 1 chr3R:26917756-26917876 ( 1) AAAAAAAA 1 chr2R:21507137-21507257 ( 39) AAAAAAAA 1 chr3R:10534792-10534912 ( 8) AAAAAAAA 1 chrX:19827903-19828023 ( 89) AAAAAAAA 1 chrX:2964841-2964961 ( 86) AAAAAAAA 1 chr3L:11400662-11400782 ( 4) AAAAAAAA 1 chr2R:10676279-10676399 ( 64) AAAAAAAA 1 chr2L:12579279-12579399 ( 11) AAAAAAAA 1 chrX:4940772-4940892 ( 86) AAAAAAAA 1 chr2L:521137-521257 ( 57) AAAAAAAA 1 chr3R:17712485-17712605 ( 36) AAAAAAAA 1 chr2L:9972753-9972873 ( 99) AAAAAAAA 1 chr3R:21586236-21586356 ( 51) AAAAAAAA 1 chrX:7496732-7496852 ( 72) AAAAAAAA 1 chr2R:21885902-21886022 ( 1) AAAAAAAA 1 chr3L:9038331-9038451 ( 85) AAAAAAAA 1 chr2R:17621660-17621780 ( 36) AAAAAAAA 1 chr3L:15540834-15540954 ( 32) AAAAAAAA 1 chrX:13628078-13628198 ( 73) AAAAAAAA 1 chr2R:25238878-25238998 ( 71) AAAAAAAA 1 chr3L:15537115-15537235 ( 62) AAAAAAAA 1 chr3R:6436062-6436182 ( 61) AAAAAAAA 1 chr3L:15227807-15227927 ( 60) AAAAAAAA 1 chr3R:25464100-25464220 ( 4) AAAAAAAA 1 chrX:8535956-8536076 ( 14) AAAAAAAA 1 chrX:17503180-17503300 ( 101) AAAAAAAA 1 chr2R:25236220-25236340 ( 49) AAAAAAAA 1 chrX:6702663-6702783 ( 42) AAAAAAAA 1 chr3L:15201492-15201612 ( 92) AAAAAAAA 1 chrX:5056117-5056237 ( 72) AAAAAAAA 1 chr2R:10013714-10013834 ( 47) AAAAAAAA 1 chr2R:15915211-15915331 ( 32) AAAAAAAA 1 chr3L:4156598-4156718 ( 51) AAAAAAAA 1 chr3L:14164091-14164211 ( 7) AAAAAAAA 1 chr3R:13947520-13947640 ( 38) AAAAAAAA 1 chr2R:10548187-10548307 ( 10) AAAAAAAA 1 chrX:7168142-7168262 ( 30) AAAAAAAA 1 chr3R:24172449-24172569 ( 42) AAAAAAAA 1 chrX:17578958-17579078 ( 29) AAAAAAAA 1 chrX:18933612-18933732 ( 4) AAAAAAAA 1 chr2R:19277509-19277629 ( 80) AAAAAAAA 1 chr3L:8374244-8374364 ( 1) AAAAAAAA 1 chr3R:16503451-16503571 ( 38) AAAAAAAA 1 chrX:909042-909162 ( 82) AAAAAAAA 1 chr2R:25128138-25128258 ( 90) AAAAAAAA 1 chr3R:10656723-10656843 ( 53) AAAAAAAA 1 chr3L:10281374-10281494 ( 9) AAAAAAAA 1 chr3R:15671259-15671379 ( 23) AAAAAAAA 1 chr3L:10846847-10846967 ( 78) AAAAAAAA 1 chrX:12941139-12941259 ( 35) AAAAAAAA 1 chrX:8295961-8296081 ( 68) ACAAAAAA 1 chrX:3140071-3140191 ( 113) ACAAAAAA 1 chr3L:15777185-15777305 ( 94) ACAAAAAA 1 chr2L:19217118-19217238 ( 53) ACAAAAAA 1 chr2R:17816977-17817097 ( 38) ACAAAAAA 1 chr3R:19174651-19174771 ( 48) ACAAAAAA 1 chrX:20725481-20725601 ( 24) ACAAAAAA 1 chr3L:4719946-4720066 ( 18) AAAAAAAT 1 chr2R:14918702-14918822 ( 69) AAAAAAAT 1 chr2R:12960449-12960569 ( 88) AAAAAAAT 1 chr2L:12686948-12687068 ( 87) AAAAAAAT 1 chr3L:10697686-10697806 ( 98) AAAAAAAT 1 chrX:6868891-6869011 ( 41) AAAAAAAT 1 chrX:7486424-7486544 ( 102) AAAAAAAT 1 chr3L:17499839-17499959 ( 95) AAAAAAAT 1 chr3R:7282630-7282750 ( 40) AAAAAAAT 1 chr2R:14128665-14128785 ( 13) ATAAAAAA 1 chr2R:17341457-17341577 ( 84) ATAAAAAA 1 chr3L:10247243-10247363 ( 9) ATAAAAAA 1 chr3R:13996194-13996314 ( 77) ATAAAAAA 1 chr2R:23800468-23800588 ( 45) ATAAAAAA 1 chr2R:11452914-11453034 ( 50) AAACAAAA 1 chr2R:25239622-25239742 ( 54) GAAAAAAA 1 chrX:11392983-11393103 ( 19) GAAAAAAA 1 chr2R:17829947-17830067 ( 57) AGAAAAAA 1 chrX:8522655-8522775 ( 70) AGAAAAAA 1 chr2R:19670586-19670706 ( 42) ACAAAAAT 1 chr2L:4221458-4221578 ( 85) ACAAAAAT 1 chr3L:6943207-6943327 ( 111) ACAAAAAT 1 chr2L:4906202-4906322 ( 11) ACAAAAAT 1 chr2L:2872328-2872448 ( 89) ACACAAAA 1 chrX:6991427-6991547 ( 91) ACACAAAA 1 chrX:3349970-3350090 ( 77) ACACAAAA 1 chr2R:14011766-14011886 ( 12) ACACAAAA 1 chr3L:14158277-14158397 ( 50) ATAAAAAT 1 chr3R:8684483-8684603 ( 52) AAAAAATA 1 chrX:6983126-6983246 ( 77) ATACAAAA 1 chr3L:10346425-10346545 ( 59) GTAAAAAA 1 chr2L:12566970-12567090 ( 82) GTAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.72387 E= 1.9e-132 164 -1390 -289 -1390 141 -102 -389 -232 168 -1390 -1390 -1390 162 -234 -1390 -1390 168 -1390 -1390 -1390 168 -1390 -1390 -1390 167 -1390 -1390 -549 154 -1390 -1390 -169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 153 E= 1.9e-132 0.973856 0.000000 0.026144 0.000000 0.830065 0.098039 0.013072 0.058824 1.000000 0.000000 0.000000 0.000000 0.960784 0.039216 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.993464 0.000000 0.000000 0.006536 0.908497 0.000000 0.000000 0.091503 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAA MEME-1 regular expression -------------------------------------------------------------------------------- AAAAAAAA -------------------------------------------------------------------------------- Time 7.46 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTTTTT MEME-2 width = 8 sites = 125 llr = 1090 E-value = 7.0e-121 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G 1:::11:: matrix T 9aaa99aa bits 2.4 2.1 1.9 1.7 *** ** Relative 1.4 ******* Entropy 1.2 ******** (12.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTTTTTTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:12674533-12674653 61 5.74e-05 ttttttgttt tttttttt CTGACCCACC chr3L:7788172-7788292 48 5.74e-05 AGTGGAGCTG tttttttt ttggtatttc chr2R:8635541-8635661 62 5.74e-05 Atttgttctc tttttttt tttttttcat chrX:2918669-2918789 98 5.74e-05 AGGCTTCTGT TTTTTTTT TATGTGCGGT chr3R:17062836-17062956 89 5.74e-05 GTTTTTATGG TTTTTTTT GTTAAGAATT chr3L:10771391-10771511 75 5.74e-05 TTTCTCCTCT TTTTTTTT TTGTTTTTCA chr3R:8929823-8929943 7 5.74e-05 tttttt tttttttt ttttGACAAA chr2L:20858801-20858921 77 5.74e-05 AGAATATTTA TTTTTTTT ACAATATTAA chr3R:16277652-16277772 42 5.74e-05 AATCGCTTCG TTTTTTTT TTATATATTT chr2R:19670586-19670706 60 5.74e-05 AAAAATCGTT TTTTTTTT TTTTGCAATA chr3L:4360445-4360565 37 5.74e-05 CAAAACCAGT TTTTTTTT TTATAAAGTT chr3L:14158277-14158397 95 5.74e-05 TTTGGTTTCA TTTTTTTT GTTTCGATGT chr3L:5655198-5655318 56 5.74e-05 TTTTGTCTGG TTTTTTTT TTTTTTATAC chr3L:11421000-11421120 42 5.74e-05 ttgtatacgt tttttttt tttttttGGC chr3L:8833509-8833629 109 5.74e-05 ttttgtgttt tttttttt tttt chr3L:4719946-4720066 102 5.74e-05 tttctttttt tttttttt tAGTCAGAGA chrX:3140071-3140191 9 5.74e-05 ttttagtt tttttttt tttttccttc chr3R:13075899-13076019 105 5.74e-05 TCGCCGCTTC TTTTTTTT TTGTTTTC chr2L:2872328-2872448 44 5.74e-05 ttgtgttttt tttttttt tgttttGCCT chr2R:12960449-12960569 74 5.74e-05 ACCCTTTTCA TTTTTTTT TTATTCAAAA chr2L:21806509-21806629 104 5.74e-05 ATTTTGCTTT TTTTTTTT GGAAATTTT chrX:6991427-6991547 71 5.74e-05 TTTTACCCAC TTTTTTTT TCAAAATACC chr2R:21714049-21714169 92 5.74e-05 ACTCGTTCAG TTTTTTTT GAAGCACAAG chrX:10264002-10264122 26 5.74e-05 TTATCGCACC TTTTTTTT CGTTCCACGC chr2R:21548083-21548203 48 5.74e-05 CTGTGATGTT TTTTTTTT ATTTTTCCCC chr2L:3426770-3426890 73 5.74e-05 ctgttttcgt tttttttt tttgcttttC chr3L:6807133-6807253 26 5.74e-05 ttttttgtat tttttttt tcattttcat chr2L:1658376-1658496 62 5.74e-05 TGTGATTAGC TTTTTTTT TTAAACGTGT chr2R:18664284-18664404 51 5.74e-05 TAGCATATTT TTTTTTTT TCTTGGACCA chr3L:8569614-8569734 50 5.74e-05 TGTGTTGTCG TTTTTTTT AATGTTATTA chr3R:8879002-8879122 50 5.74e-05 TCTTCGGCAT TTTTTTTT TATTTGTCTT chr2R:11452914-11453034 85 5.74e-05 TTGATTGCGT TTTTTTTT CTCACTTAAC chr2R:8183888-8184008 57 5.74e-05 AAATGGAATA TTTTTTTT TTCAATTGTG chr3L:14655653-14655773 41 5.74e-05 CCGATAttgt tttttttt tttttttttt chr2R:9558034-9558154 57 5.74e-05 GGCAAACGGG TTTTTTTT ATTCGGGTTC chr3L:10697686-10697806 70 5.74e-05 CGCAATCAAG TTTTTTTT TTGGCCTTAT chr2L:1271489-1271609 32 5.74e-05 TGCCTTGGCA TTTTTTTT ATTCGGTTTT chr3R:16545865-16545985 60 5.74e-05 CTTATCGTTT TTTTTTTT TGTCTGCTGC chr3R:26001458-26001578 58 5.74e-05 TGATTTTCGT TTTTTTTT TCTGATCTGG chr2L:14356896-14357016 61 5.74e-05 tttcttattt tttttttt ttttGGCTTC chr3L:17494083-17494203 40 5.74e-05 TTTCTGTCTT TTTTTTTT TACCCAGTGA chr2L:14133681-14133801 57 5.74e-05 CCAGCCGGCC TTTTTTTT TGCGCCATGC chr2R:17341457-17341577 38 5.74e-05 AAGAAATCAA TTTTTTTT CTTGCGTAAC chr2L:6076346-6076466 58 5.74e-05 tttatttatt tttttttt tGGCTGTGGC chrX:13243892-13244012 74 5.74e-05 GTGttttttt tttttttt ttttttCAAG chr3R:15205521-15205641 61 5.74e-05 GGTCTTTTAT TTTTTTTT TTTTACCCCA chr3R:24577711-24577831 36 5.74e-05 CGtttttcta tttttttt attttttttt chr2L:12613158-12613278 70 5.74e-05 AATCAACCCC TTTTTTTT ATGGCCCACC chr2L:5298065-5298185 102 5.74e-05 TCGCCAGTTT TTTTTTTT CGTAGCCCGC chr2L:1560261-1560381 47 5.74e-05 AACCACCtgt tttttttt tttttgtttg chr3R:24614778-24614898 22 5.74e-05 AGTAACTGGA TTTTTTTT TTGTTACCTA chr2R:14975802-14975922 79 5.74e-05 CTGTTTTGGG TTTTTTTT CGCCTGCTCT chr3L:5980627-5980747 47 5.74e-05 TGTGACCCTG TTTTTTTT CCGAGGCGCA chr2R:18573675-18573795 72 5.74e-05 TAAAATTGTT TTTTTTTT CTCTCTTTTT chr3L:698654-698774 52 5.74e-05 AAATGCGGCT TTTTTTTT TAATTGCAAA chrX:7496732-7496852 110 5.74e-05 AAATGAATAT TTTTTTTT TCT chrX:1105651-1105771 93 5.74e-05 TTATGACACT TTTTTTTT TTGGCCCGGC chr2R:17816977-17817097 83 5.74e-05 TTTGGttttt tttttttt gtatttcttt chr2L:12608944-12609064 24 5.74e-05 CATAACTATG TTTTTTTT TTTTTTTGCT chr2R:7008714-7008834 61 5.74e-05 CTGttttttt tttttttt tttGATTGCC chrX:8535956-8536076 91 5.74e-05 TCAGTTTTTT TTTTTTTT CATTATGTTT chr2R:25236220-25236340 77 5.74e-05 TCTGCTTCAT TTTTTTTT CTCATTTATT chr2R:19419545-19419665 56 5.74e-05 atatttcttt tttttttt ttttGCATTA chr3L:10809123-10809243 96 5.74e-05 CACTCTATTT TTTTTTTT TTGTGTATAT chr3L:18850121-18850241 19 5.74e-05 GAGATTTTTT TTTTTTTT TTAGCAGCGG chr3R:19151038-19151158 33 5.74e-05 AGACCAAGTT TTTTTTTT ATAATTTTAT chr2R:14011766-14011886 73 5.74e-05 TGTGCTGGTT TTTTTTTT TTTGTTGTAC chrX:18939602-18939722 75 5.74e-05 CGCCGttttt tttttttt gttttgtttC chrX:7486424-7486544 113 5.74e-05 AAAAAATATT TTTTTTTT chr2L:12566970-12567090 38 5.74e-05 ttttttcttc tttttttt tgctttttAT chr3L:14592286-14592406 33 5.74e-05 TGTTTTTCCT TTTTTTTT CTGACCCCTC chrX:14867094-14867214 49 5.74e-05 ttttttattt tttttttt tttGAATCTT chr2L:5418123-5418243 82 5.74e-05 ttttttcttc tttttttt tGTGGGCACG chr3L:10234259-10234379 6 5.74e-05 CACAG tttttttt tctttttttg chr2R:10574014-10574134 54 5.74e-05 GCTGCTGGAT TTTTTTTT TCTTTTGGCT chr3L:6342392-6342512 66 5.74e-05 TCTACATTTT TTTTTTTT TGGGTTTTCT chr3L:17499839-17499959 60 5.74e-05 GTCCTGCCCC TTTTTTTT CCCTTAAGAG chr3L:10308565-10308685 70 5.74e-05 TGCGTACCTC TTTTTTTT TTATATGCAA chr2R:23572597-23572717 91 5.74e-05 TGCGGCTGCT Tttttttt ttcttttcta chr3L:10276645-10276765 48 5.74e-05 CTCTCTACTT TTTTTTTT GGTGCTATTG chr3R:30414614-30414734 42 5.74e-05 TCTATTCACA TTTTTTTT TTAATTTTGA chr3L:10279627-10279747 25 5.74e-05 TCTCCGGGTT TTTTTTTT CCACCGTTCA chr2R:17807383-17807503 2 5.74e-05 T TTTTTTTT TTCTTTCCGT chrX:8522655-8522775 28 5.74e-05 ggtatatttt tttttttt ttgtttattt chr2R:18374223-18374343 2 5.74e-05 G TTTTTTTT TTTGCTTCCT chrX:11392983-11393103 101 5.74e-05 TTTTTGTTGA TTTTTTTT GCTTGGAGCT chr3L:10281374-10281494 63 5.74e-05 CTGAAAATCC TTTTTTTT CCATGCCCGT chrX:17808658-17808778 51 5.74e-05 GTGGAGTTCG TTTTTTTT TTTTGAGCCA chrX:7319853-7319973 78 5.74e-05 GTCCTCTGCT TTTTTTTT GTTTTTTACC chrX:6983126-6983246 7 9.51e-05 ATTAAG GTTTTTTT CGGGCTCGCT chrX:6004782-6004902 11 9.51e-05 ATTTAGGGCC GTTTTTTT CCTTTTCCGC chr3R:16347812-16347932 61 9.51e-05 GGTTCGGTGA GTTTTTTT CTTTCGTTTT chr3R:11285440-11285560 27 9.51e-05 GTTTGGTTTG GTTTTTTT GCCTTTCTGT chr2L:15401997-15402117 83 9.51e-05 TGTAAGAAAT GTTTTTTT GCATAAGTTA chr2R:17621660-17621780 89 9.51e-05 GCTGAGGTCA GTTTTTTT GGGCGGTGAA chrX:17503180-17503300 1 9.51e-05 . GTTTTTTT CTTTTTTCTT chr3R:8686567-8686687 83 9.51e-05 TTTGAGGAGT GTTTTTTT GTGTGTGATA chr2L:21795642-21795762 81 9.51e-05 GTTCTGTCTA GTTTTTTT ACTCAACTCT chr2L:4906202-4906322 96 9.51e-05 CTGTTGTTGG GTTTTTTT ATGTTTTTAT chr3L:16166749-16166869 63 1.33e-04 AGACGGAACA TTTTTGTT TATGTTGATA chrX:5192689-5192809 89 1.33e-04 TGTGCTACAA TTTTTGTT CAACCACTTA chrX:19148394-19148514 99 1.33e-04 TAAGTTGACC tttttgtt tttgtcgatt chr3R:6921653-6921773 99 1.33e-04 CCTCGATTCT TTTTTGTT CCATCCATGG chr2R:11599752-11599872 109 1.33e-04 ttctcttgta tttttgtt gttt chr3L:6788094-6788214 7 1.33e-04 ttttgt tttttgtt ttttACTCAC chr2R:21885902-21886022 37 1.33e-04 TAGTTGCTGG TTTTTGTT TATTTATTCA chrX:4106386-4106506 26 1.33e-04 TCCTAACTGG TTTTTGTT GACTGCGCTT chr3L:12107515-12107635 56 1.33e-04 TAAATGAATT TTTTTGTT TTTATAAATC chrX:1607951-1608071 35 1.33e-04 GTTTTTCGCA TTTTTGTT TTGTTTCTGA chr2R:8601938-8602058 13 1.71e-04 AGGTTTTCAC TTTTGTTT TGTTCCATTT chrX:17733971-17734091 75 1.71e-04 ttcattccgc ttttgttt caattccgtt chr3R:21853070-21853190 111 1.71e-04 AAAAAACGCG TTTTGTTT AC chr2R:25238878-25238998 40 2.08e-04 CTGTCAAAGG TTTTTTGT CTAGTGGCCG chr3R:19174852-19174972 47 2.08e-04 TTTCTCACGA TTTTTTGT GTTCTCCCTG chr3R:5322379-5322499 1 2.47e-04 . TTTTTTTC GTAGCCATAA chr3R:24773583-24773703 80 2.47e-04 TGGAAGACTC TTTTTTTC GAGTTGACGT chr3L:14681603-14681723 31 2.47e-04 TCCACTGTGA TTTTTTTC CGCCAACAGC chrX:20725481-20725601 78 2.47e-04 TTTTGTACCC TTTTTTTC TGCCAGTGGG chr3R:27558484-27558604 57 2.72e-04 GCAGCAGCAG gttttgtt cttgttgttg chr2R:16211962-16212082 48 2.97e-04 ACCACCCTTC GTTTGTTT GTTCGCCGCA chr2L:10749780-10749900 15 2.97e-04 AAGGGGCAGC GTTTGTTT ATGCAAATGC chrX:14209225-14209345 35 2.97e-04 tgtgtgtaat gtttgtTT ATTGAATGAC chrX:17346208-17346328 111 3.21e-04 TACTACGTGG ttttggtt tt chr3L:21194556-21194676 92 3.46e-04 CGTAAACAAA GTTTTTGT GCGCACGCAA chr2R:9711049-9711169 4 3.46e-04 CGG GTTTTTGT GTGGAAAGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:12674533-12674653 5.7e-05 60_[+2]_52 chr3L:7788172-7788292 5.7e-05 47_[+2]_65 chr2R:8635541-8635661 5.7e-05 61_[+2]_51 chrX:2918669-2918789 5.7e-05 97_[+2]_15 chr3R:17062836-17062956 5.7e-05 88_[+2]_24 chr3L:10771391-10771511 5.7e-05 74_[+2]_38 chr3R:8929823-8929943 5.7e-05 6_[+2]_106 chr2L:20858801-20858921 5.7e-05 76_[+2]_36 chr3R:16277652-16277772 5.7e-05 41_[+2]_71 chr2R:19670586-19670706 5.7e-05 59_[+2]_53 chr3L:4360445-4360565 5.7e-05 36_[+2]_76 chr3L:14158277-14158397 5.7e-05 94_[+2]_18 chr3L:5655198-5655318 5.7e-05 55_[+2]_57 chr3L:11421000-11421120 5.7e-05 41_[+2]_71 chr3L:8833509-8833629 5.7e-05 108_[+2]_4 chr3L:4719946-4720066 5.7e-05 101_[+2]_11 chrX:3140071-3140191 5.7e-05 8_[+2]_104 chr3R:13075899-13076019 5.7e-05 104_[+2]_8 chr2L:2872328-2872448 5.7e-05 43_[+2]_69 chr2R:12960449-12960569 5.7e-05 73_[+2]_39 chr2L:21806509-21806629 5.7e-05 103_[+2]_9 chrX:6991427-6991547 5.7e-05 70_[+2]_42 chr2R:21714049-21714169 5.7e-05 91_[+2]_21 chrX:10264002-10264122 5.7e-05 25_[+2]_87 chr2R:21548083-21548203 5.7e-05 47_[+2]_65 chr2L:3426770-3426890 5.7e-05 72_[+2]_40 chr3L:6807133-6807253 5.7e-05 25_[+2]_87 chr2L:1658376-1658496 5.7e-05 61_[+2]_51 chr2R:18664284-18664404 5.7e-05 50_[+2]_62 chr3L:8569614-8569734 5.7e-05 49_[+2]_63 chr3R:8879002-8879122 5.7e-05 49_[+2]_63 chr2R:11452914-11453034 5.7e-05 84_[+2]_28 chr2R:8183888-8184008 5.7e-05 56_[+2]_56 chr3L:14655653-14655773 5.7e-05 40_[+2]_72 chr2R:9558034-9558154 5.7e-05 56_[+2]_56 chr3L:10697686-10697806 5.7e-05 69_[+2]_43 chr2L:1271489-1271609 5.7e-05 31_[+2]_81 chr3R:16545865-16545985 5.7e-05 59_[+2]_53 chr3R:26001458-26001578 5.7e-05 57_[+2]_55 chr2L:14356896-14357016 5.7e-05 60_[+2]_52 chr3L:17494083-17494203 5.7e-05 39_[+2]_73 chr2L:14133681-14133801 5.7e-05 56_[+2]_56 chr2R:17341457-17341577 5.7e-05 37_[+2]_75 chr2L:6076346-6076466 5.7e-05 57_[+2]_55 chrX:13243892-13244012 5.7e-05 73_[+2]_39 chr3R:15205521-15205641 5.7e-05 60_[+2]_52 chr3R:24577711-24577831 5.7e-05 35_[+2]_77 chr2L:12613158-12613278 5.7e-05 69_[+2]_43 chr2L:5298065-5298185 5.7e-05 101_[+2]_11 chr2L:1560261-1560381 5.7e-05 46_[+2]_66 chr3R:24614778-24614898 5.7e-05 21_[+2]_91 chr2R:14975802-14975922 5.7e-05 78_[+2]_34 chr3L:5980627-5980747 5.7e-05 46_[+2]_66 chr2R:18573675-18573795 5.7e-05 71_[+2]_41 chr3L:698654-698774 5.7e-05 51_[+2]_61 chrX:7496732-7496852 5.7e-05 109_[+2]_3 chrX:1105651-1105771 5.7e-05 92_[+2]_20 chr2R:17816977-17817097 5.7e-05 82_[+2]_30 chr2L:12608944-12609064 5.7e-05 23_[+2]_89 chr2R:7008714-7008834 5.7e-05 60_[+2]_52 chrX:8535956-8536076 5.7e-05 90_[+2]_22 chr2R:25236220-25236340 5.7e-05 76_[+2]_36 chr2R:19419545-19419665 5.7e-05 55_[+2]_57 chr3L:10809123-10809243 5.7e-05 95_[+2]_17 chr3L:18850121-18850241 5.7e-05 18_[+2]_94 chr3R:19151038-19151158 5.7e-05 32_[+2]_80 chr2R:14011766-14011886 5.7e-05 72_[+2]_40 chrX:18939602-18939722 5.7e-05 74_[+2]_38 chrX:7486424-7486544 5.7e-05 112_[+2] chr2L:12566970-12567090 5.7e-05 37_[+2]_75 chr3L:14592286-14592406 5.7e-05 32_[+2]_80 chrX:14867094-14867214 5.7e-05 48_[+2]_64 chr2L:5418123-5418243 5.7e-05 81_[+2]_31 chr3L:10234259-10234379 5.7e-05 5_[+2]_107 chr2R:10574014-10574134 5.7e-05 53_[+2]_59 chr3L:6342392-6342512 5.7e-05 65_[+2]_47 chr3L:17499839-17499959 5.7e-05 59_[+2]_53 chr3L:10308565-10308685 5.7e-05 69_[+2]_43 chr2R:23572597-23572717 5.7e-05 90_[+2]_22 chr3L:10276645-10276765 5.7e-05 47_[+2]_65 chr3R:30414614-30414734 5.7e-05 41_[+2]_71 chr3L:10279627-10279747 5.7e-05 24_[+2]_88 chr2R:17807383-17807503 5.7e-05 1_[+2]_111 chrX:8522655-8522775 5.7e-05 27_[+2]_85 chr2R:18374223-18374343 5.7e-05 1_[+2]_111 chrX:11392983-11393103 5.7e-05 100_[+2]_12 chr3L:10281374-10281494 5.7e-05 62_[+2]_50 chrX:17808658-17808778 5.7e-05 50_[+2]_62 chrX:7319853-7319973 5.7e-05 77_[+2]_35 chrX:6983126-6983246 9.5e-05 6_[+2]_106 chrX:6004782-6004902 9.5e-05 10_[+2]_102 chr3R:16347812-16347932 9.5e-05 60_[+2]_52 chr3R:11285440-11285560 9.5e-05 26_[+2]_86 chr2L:15401997-15402117 9.5e-05 82_[+2]_30 chr2R:17621660-17621780 9.5e-05 88_[+2]_24 chrX:17503180-17503300 9.5e-05 [+2]_112 chr3R:8686567-8686687 9.5e-05 82_[+2]_30 chr2L:21795642-21795762 9.5e-05 80_[+2]_32 chr2L:4906202-4906322 9.5e-05 95_[+2]_17 chr3L:16166749-16166869 0.00013 62_[+2]_50 chrX:5192689-5192809 0.00013 88_[+2]_24 chrX:19148394-19148514 0.00013 98_[+2]_14 chr3R:6921653-6921773 0.00013 98_[+2]_14 chr2R:11599752-11599872 0.00013 108_[+2]_4 chr3L:6788094-6788214 0.00013 6_[+2]_106 chr2R:21885902-21886022 0.00013 36_[+2]_76 chrX:4106386-4106506 0.00013 25_[+2]_87 chr3L:12107515-12107635 0.00013 55_[+2]_57 chrX:1607951-1608071 0.00013 34_[+2]_78 chr2R:8601938-8602058 0.00017 12_[+2]_100 chrX:17733971-17734091 0.00017 74_[+2]_38 chr3R:21853070-21853190 0.00017 110_[+2]_2 chr2R:25238878-25238998 0.00021 39_[+2]_73 chr3R:19174852-19174972 0.00021 46_[+2]_66 chr3R:5322379-5322499 0.00025 [+2]_112 chr3R:24773583-24773703 0.00025 79_[+2]_33 chr3L:14681603-14681723 0.00025 30_[+2]_82 chrX:20725481-20725601 0.00025 77_[+2]_35 chr3R:27558484-27558604 0.00027 56_[+2]_56 chr2R:16211962-16212082 0.0003 47_[+2]_65 chr2L:10749780-10749900 0.0003 14_[+2]_98 chrX:14209225-14209345 0.0003 34_[+2]_78 chrX:17346208-17346328 0.00032 110_[+2]_2 chr3L:21194556-21194676 0.00035 91_[+2]_21 chr2R:9711049-9711169 0.00035 3_[+2]_109 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTTTTT width=8 seqs=125 chr2L:12674533-12674653 ( 61) TTTTTTTT 1 chr3L:7788172-7788292 ( 48) TTTTTTTT 1 chr2R:8635541-8635661 ( 62) TTTTTTTT 1 chrX:2918669-2918789 ( 98) TTTTTTTT 1 chr3R:17062836-17062956 ( 89) TTTTTTTT 1 chr3L:10771391-10771511 ( 75) TTTTTTTT 1 chr3R:8929823-8929943 ( 7) TTTTTTTT 1 chr2L:20858801-20858921 ( 77) TTTTTTTT 1 chr3R:16277652-16277772 ( 42) TTTTTTTT 1 chr2R:19670586-19670706 ( 60) TTTTTTTT 1 chr3L:4360445-4360565 ( 37) TTTTTTTT 1 chr3L:14158277-14158397 ( 95) TTTTTTTT 1 chr3L:5655198-5655318 ( 56) TTTTTTTT 1 chr3L:11421000-11421120 ( 42) TTTTTTTT 1 chr3L:8833509-8833629 ( 109) TTTTTTTT 1 chr3L:4719946-4720066 ( 102) TTTTTTTT 1 chrX:3140071-3140191 ( 9) TTTTTTTT 1 chr3R:13075899-13076019 ( 105) TTTTTTTT 1 chr2L:2872328-2872448 ( 44) TTTTTTTT 1 chr2R:12960449-12960569 ( 74) TTTTTTTT 1 chr2L:21806509-21806629 ( 104) TTTTTTTT 1 chrX:6991427-6991547 ( 71) TTTTTTTT 1 chr2R:21714049-21714169 ( 92) TTTTTTTT 1 chrX:10264002-10264122 ( 26) TTTTTTTT 1 chr2R:21548083-21548203 ( 48) TTTTTTTT 1 chr2L:3426770-3426890 ( 73) TTTTTTTT 1 chr3L:6807133-6807253 ( 26) TTTTTTTT 1 chr2L:1658376-1658496 ( 62) TTTTTTTT 1 chr2R:18664284-18664404 ( 51) TTTTTTTT 1 chr3L:8569614-8569734 ( 50) TTTTTTTT 1 chr3R:8879002-8879122 ( 50) TTTTTTTT 1 chr2R:11452914-11453034 ( 85) TTTTTTTT 1 chr2R:8183888-8184008 ( 57) TTTTTTTT 1 chr3L:14655653-14655773 ( 41) TTTTTTTT 1 chr2R:9558034-9558154 ( 57) TTTTTTTT 1 chr3L:10697686-10697806 ( 70) TTTTTTTT 1 chr2L:1271489-1271609 ( 32) TTTTTTTT 1 chr3R:16545865-16545985 ( 60) TTTTTTTT 1 chr3R:26001458-26001578 ( 58) TTTTTTTT 1 chr2L:14356896-14357016 ( 61) TTTTTTTT 1 chr3L:17494083-17494203 ( 40) TTTTTTTT 1 chr2L:14133681-14133801 ( 57) TTTTTTTT 1 chr2R:17341457-17341577 ( 38) TTTTTTTT 1 chr2L:6076346-6076466 ( 58) TTTTTTTT 1 chrX:13243892-13244012 ( 74) TTTTTTTT 1 chr3R:15205521-15205641 ( 61) TTTTTTTT 1 chr3R:24577711-24577831 ( 36) TTTTTTTT 1 chr2L:12613158-12613278 ( 70) TTTTTTTT 1 chr2L:5298065-5298185 ( 102) TTTTTTTT 1 chr2L:1560261-1560381 ( 47) TTTTTTTT 1 chr3R:24614778-24614898 ( 22) TTTTTTTT 1 chr2R:14975802-14975922 ( 79) TTTTTTTT 1 chr3L:5980627-5980747 ( 47) TTTTTTTT 1 chr2R:18573675-18573795 ( 72) TTTTTTTT 1 chr3L:698654-698774 ( 52) TTTTTTTT 1 chrX:7496732-7496852 ( 110) TTTTTTTT 1 chrX:1105651-1105771 ( 93) TTTTTTTT 1 chr2R:17816977-17817097 ( 83) TTTTTTTT 1 chr2L:12608944-12609064 ( 24) TTTTTTTT 1 chr2R:7008714-7008834 ( 61) TTTTTTTT 1 chrX:8535956-8536076 ( 91) TTTTTTTT 1 chr2R:25236220-25236340 ( 77) TTTTTTTT 1 chr2R:19419545-19419665 ( 56) TTTTTTTT 1 chr3L:10809123-10809243 ( 96) TTTTTTTT 1 chr3L:18850121-18850241 ( 19) TTTTTTTT 1 chr3R:19151038-19151158 ( 33) TTTTTTTT 1 chr2R:14011766-14011886 ( 73) TTTTTTTT 1 chrX:18939602-18939722 ( 75) TTTTTTTT 1 chrX:7486424-7486544 ( 113) TTTTTTTT 1 chr2L:12566970-12567090 ( 38) TTTTTTTT 1 chr3L:14592286-14592406 ( 33) TTTTTTTT 1 chrX:14867094-14867214 ( 49) TTTTTTTT 1 chr2L:5418123-5418243 ( 82) TTTTTTTT 1 chr3L:10234259-10234379 ( 6) TTTTTTTT 1 chr2R:10574014-10574134 ( 54) TTTTTTTT 1 chr3L:6342392-6342512 ( 66) TTTTTTTT 1 chr3L:17499839-17499959 ( 60) TTTTTTTT 1 chr3L:10308565-10308685 ( 70) TTTTTTTT 1 chr2R:23572597-23572717 ( 91) TTTTTTTT 1 chr3L:10276645-10276765 ( 48) TTTTTTTT 1 chr3R:30414614-30414734 ( 42) TTTTTTTT 1 chr3L:10279627-10279747 ( 25) TTTTTTTT 1 chr2R:17807383-17807503 ( 2) TTTTTTTT 1 chrX:8522655-8522775 ( 28) TTTTTTTT 1 chr2R:18374223-18374343 ( 2) TTTTTTTT 1 chrX:11392983-11393103 ( 101) TTTTTTTT 1 chr3L:10281374-10281494 ( 63) TTTTTTTT 1 chrX:17808658-17808778 ( 51) TTTTTTTT 1 chrX:7319853-7319973 ( 78) TTTTTTTT 1 chrX:6983126-6983246 ( 7) GTTTTTTT 1 chrX:6004782-6004902 ( 11) GTTTTTTT 1 chr3R:16347812-16347932 ( 61) GTTTTTTT 1 chr3R:11285440-11285560 ( 27) GTTTTTTT 1 chr2L:15401997-15402117 ( 83) GTTTTTTT 1 chr2R:17621660-17621780 ( 89) GTTTTTTT 1 chrX:17503180-17503300 ( 1) GTTTTTTT 1 chr3R:8686567-8686687 ( 83) GTTTTTTT 1 chr2L:21795642-21795762 ( 81) GTTTTTTT 1 chr2L:4906202-4906322 ( 96) GTTTTTTT 1 chr3L:16166749-16166869 ( 63) TTTTTGTT 1 chrX:5192689-5192809 ( 89) TTTTTGTT 1 chrX:19148394-19148514 ( 99) TTTTTGTT 1 chr3R:6921653-6921773 ( 99) TTTTTGTT 1 chr2R:11599752-11599872 ( 109) TTTTTGTT 1 chr3L:6788094-6788214 ( 7) TTTTTGTT 1 chr2R:21885902-21886022 ( 37) TTTTTGTT 1 chrX:4106386-4106506 ( 26) TTTTTGTT 1 chr3L:12107515-12107635 ( 56) TTTTTGTT 1 chrX:1607951-1608071 ( 35) TTTTTGTT 1 chr2R:8601938-8602058 ( 13) TTTTGTTT 1 chrX:17733971-17734091 ( 75) TTTTGTTT 1 chr3R:21853070-21853190 ( 111) TTTTGTTT 1 chr2R:25238878-25238998 ( 40) TTTTTTGT 1 chr3R:19174852-19174972 ( 47) TTTTTTGT 1 chr3R:5322379-5322499 ( 1) TTTTTTTC 1 chr3R:24773583-24773703 ( 80) TTTTTTTC 1 chr3L:14681603-14681723 ( 31) TTTTTTTC 1 chrX:20725481-20725601 ( 78) TTTTTTTC 1 chr3R:27558484-27558604 ( 57) GTTTTGTT 1 chr2R:16211962-16212082 ( 48) GTTTGTTT 1 chr2L:10749780-10749900 ( 15) GTTTGTTT 1 chrX:14209225-14209345 ( 35) GTTTGTTT 1 chrX:17346208-17346328 ( 111) TTTTGGTT 1 chr3L:21194556-21194676 ( 92) GTTTTTGT 1 chr2R:9711049-9711169 ( 4) GTTTTTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.81167 E= 7.0e-121 -1361 -1361 -60 157 -1361 -1361 -1361 176 -1361 -1361 -1361 176 -1361 -1361 -1361 176 -1361 -1361 -179 168 -1361 -1361 -101 162 -1361 -1361 -260 172 -1361 -264 -1361 172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 125 E= 7.0e-121 0.000000 0.000000 0.128000 0.872000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.056000 0.944000 0.000000 0.000000 0.096000 0.904000 0.000000 0.000000 0.032000 0.968000 0.000000 0.032000 0.000000 0.968000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTT MEME-2 regular expression -------------------------------------------------------------------------------- TTTTTTTT -------------------------------------------------------------------------------- Time 13.47 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTTTRT MEME-3 width = 8 sites = 90 llr = 675 E-value = 2.1e-018 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::2: pos.-specific C :::::121 probability G ::::1:41 matrix T aaaa9928 bits 2.4 2.1 1.9 1.7 **** Relative 1.4 ****** Entropy 1.2 ****** (10.8 bits) 0.9 ****** * 0.7 ****** * 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel TTTTTTGT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:12674533-12674653 51 3.77e-05 CCAtttttgt ttttttgt tttttttttt chrX:2918669-2918789 38 3.77e-05 ATAAGACGGG TTTTTTGT CGGTGCCTCA chr2R:8601938-8602058 28 3.77e-05 TTTTGTTCCA TTTTTTGT GGACATGAAA chr3R:17062836-17062956 73 3.77e-05 TGCCGCTCGT TTTTTTGT TTTTATGGTT chr3L:14158277-14158397 2 3.77e-05 T TTTTTTGT TCCCAGAAAT chr3L:11421000-11421120 28 3.77e-05 ATTTTCCCAA ttttttgt atacgttttt chr2L:2872328-2872448 30 3.77e-05 TTCCGCCTCG ttttttgt gttttttttt chr3L:6807133-6807253 16 3.77e-05 TTCCCCGGCA ttttttgt attttttttt chr2L:1658376-1658496 79 3.77e-05 TTTAAACGTG TTTTTTGT GCTTCCTTCT chr3R:8879002-8879122 27 3.77e-05 TATTCGCACG TTTTTTGT GGTTTTCTTC chr3R:26001458-26001578 5 3.77e-05 CGGT TTTTTTGT TGTTTCTTTT chr3R:15205521-15205641 112 3.77e-05 ATGCGCGTCG TTTTTTGT G chr3R:24614778-24614898 79 3.77e-05 TTACGTTTTT TTTTTTGT TTGTTGAGCT chr2R:18573675-18573795 87 3.77e-05 TTTCTCTCTT TTTTTTGT AGTTGGAGGG chr2L:15401997-15402117 104 3.77e-05 TAAGTTAATA TTTTTTGT TCAGTGTGT chr2L:12608944-12609064 103 3.77e-05 ttttattttt ttttttgt ttttgatttt chr3R:8686567-8686687 53 3.77e-05 TGGATTTCGA TTTTTTGT TTTTTGCTCG chr2R:19419545-19419665 37 3.77e-05 CCAttttttt ttttttgt aatatttctt chr2R:14011766-14011886 38 3.77e-05 AGGTCAGCGA TTTTTTGT ATTTTTGTGT chr3L:10234259-10234379 59 3.77e-05 ATAGGCTTAC TTTTTTGT CGTCCACTTT chr2R:17807383-17807503 27 3.77e-05 CGTTTTCCGA TTTTTTGT GTTTGCCCCT chrX:11392983-11393103 90 3.77e-05 TTTCTTTGGG TTTTTTGT TGATTTTTTT chrX:20725481-20725601 66 3.77e-05 CCCTAAGCAG TTTTTTGT ACCCTTTTTT chr2R:8635541-8635661 91 7.64e-05 ttcattttat ttttttCT GGCCCGCCGT chr3L:16166749-16166869 111 7.64e-05 TCTTCCCCAt ttttttct ca chr2L:21806509-21806629 7 7.64e-05 TCGAGG TTTTTTCT ATAGCAACCC chr2L:3426770-3426890 104 7.64e-05 TGAAGTAACA TTTTTTCT TCTTTTTGT chrX:17503180-17503300 10 7.64e-05 GTTTTTTTC TTTTTTCT TGTTTGCTGG chr2L:12566970-12567090 28 7.64e-05 CTGCTGATAt ttttttct tctttttttt chr3L:5655198-5655318 64 1.37e-04 GGTTTTTTTT TTTTTTAT ACTGCGCAGT chr3L:15777185-15777305 73 1.37e-04 AGTAGCTGCA TTTTTTAT ACCCGCTGAC chr2R:12960449-12960569 113 1.37e-04 AAGAAAGACT TTTTTTAT chr3L:6449309-6449429 30 1.37e-04 TTCGCATTTA TTTTTTAT ATTTTTGCCC chr3R:24773583-24773703 105 1.37e-04 CGTTGGTGCT TTTTTTAT CTCAAAGT chr3L:17494083-17494203 67 1.37e-04 ATTTCTTGTG TTTTTTAT TGGGAGCTTT chr2L:12613158-12613278 49 1.37e-04 TGCGTGACCG TTTTTTAT GTAAATCAAC chr2L:12579279-12579399 93 1.37e-04 TGGCTGTTCA TTTTTTAT AGAAAGGGTG chrX:7496732-7496852 23 1.37e-04 GCCTCAAGCG TTTTTTAT AAATTAACAA chr2R:25236220-25236340 93 1.37e-04 TTCTCATTTA TTTTTTAT ATCCACCGTA chr3R:19151038-19151158 72 1.37e-04 GTGCGTGAGC TTTTTTAT TTTTGTCTTT chrX:14867094-14867214 39 1.37e-04 GGACCTATAG ttttttat tttttttttt chrX:7168142-7168262 52 1.37e-04 ACGCAGACAG TTTTTTAT GGGTCCGGGG chr2R:23572597-23572717 33 1.37e-04 TTGTTGAGAC TTTTTTAT GCATTATTCT chr3L:7788172-7788292 72 1.95e-04 tttctgtatt tttttttt ttttGGGTTA chr2R:21714049-21714169 10 1.95e-04 GCCTTCTTT TTTTTTTT TTGCGCACCT chr3L:14655653-14655773 53 1.95e-04 tttttttttt tttttttt GACCTTTTCT chr2R:9558034-9558154 83 1.95e-04 TCTGCAACTG TTTTTTTT GGCGACTCGC chr3R:24577711-24577831 46 1.95e-04 ttttttttat tttttttt ttCGTAGACG chrX:1105651-1105771 36 1.95e-04 CAAATATAAA TTTTTTTT CAGTTCCCCC chr2R:17816977-17817097 53 1.95e-04 AAATTGACGC TTTTTTTT CGGCCCCTGC chr3L:18850121-18850241 51 1.95e-04 AATGATTCCT TTTTTTTT TGCGCAGCTG chr2L:5418123-5418243 69 1.95e-04 TTTCCGTGtt tttttttt tcttcttttt chr3L:10279627-10279747 5 1.95e-04 GTGT TTTTTTTT CCTCTCCGGG chrX:8522655-8522775 8 1.95e-04 ttgttca tttttttt caggtatatt chr3L:10281374-10281494 113 1.95e-04 TGCAAATAAG TTTTTTTT chr3L:8833509-8833629 99 2.19e-04 Attctttcgt ttttgtgt tttttttttt chr3R:5322379-5322499 105 2.19e-04 AGGTCTTTGC TTTTGTGT TCGCCGTA chrX:18939602-18939722 53 2.19e-04 gttgttgttg ttttgtGT GGGCCGCCGt chr3L:19199784-19199904 52 2.44e-04 AAAAAAAAAC TTTTTTGG CGCCGCACAT chr2R:8183888-8184008 89 2.44e-04 CACCCGCAGC TTTTTTGG TATCTTTAAA chrX:4940772-4940892 63 2.44e-04 TTTTGACAAT TTTTTTGG CTCAGGTGAG chrX:17808658-17808778 9 2.44e-04 GTGGCCAT TTTTTTGG GCGTTTTATT chr2R:12460135-12460255 39 2.70e-04 GGTGCGGATA TTTTTTGC ATGCCACTCA chr2R:10574014-10574134 38 2.70e-04 TCATCAGCAG TTTTTTGC TGCTGGATTT chr3L:2584980-2585100 60 2.95e-04 AAAAAAACCT TTTTTCGT TGCCATGGCA chr3L:4156598-4156718 91 2.95e-04 CCCTAACCCT TTTTTCGT AGAGGCTGAG chrX:17346208-17346328 85 3.21e-04 GAAATCGGAG TTTTGTCT CTGATTGTTA chr3L:6788094-6788214 68 3.21e-04 TCATGTAAAT TTTTGTCT AAGGACCAAC chr3L:10308565-10308685 94 3.46e-04 GCAAATGAGC TTTTTTCG AGCTCATACC chr2R:18374223-18374343 20 3.46e-04 TTTGCTTCCT TTTTTTCG GGCGCTGTCT chr3R:19174651-19174771 9 3.46e-04 TAAACGAC TTTTTTCG GTAGTCAAGC chr2L:7809353-7809473 49 3.72e-04 CAACCTTCCC TTTTTTCC AGTTGGAATT chr3L:10276645-10276765 106 3.72e-04 AAAGGTTTTC TTTTTTCC ACTCCAT chrX:3140071-3140191 17 4.38e-04 tttttttttt tttttcct tctgttttct chrX:10536366-10536486 70 4.38e-04 AAAGAAGCCG TTTTGTAT AGCAAAAAAA chr3R:6921653-6921773 84 4.38e-04 ACCGGGTGGA TTTTTCCT CGATTCTTTT chr2R:11599752-11599872 37 4.38e-04 TTTCCTAAAA TTTTTCCT CACTCTGCTG chr3L:14592286-14592406 25 4.38e-04 CTGCCTGTTG TTTTTCCT TTTTTTTTCT chr3L:10846847-10846967 96 4.38e-04 AAGGTTCGAA TTTTGTAT ACGCACCATA chr3L:10771391-10771511 49 5.57e-04 TTAGAAATCT TTTTGTTT TCCATTTATT chr2L:1560261-1560381 56 5.57e-04 tttttttttt ttttgttt gtttgttACC chr2L:21795642-21795762 98 5.57e-04 TACTCAACTC TTTTTTAC TTCTTATTTA chr2R:19277509-19277629 11 5.57e-04 TCACTTTCAC TTTTTTAC GGCGCATAAA chrX:7319853-7319973 87 5.57e-04 TTTTTTTTTG TTTTTTAC CCCATACATG chrX:4106386-4106506 111 6.36e-04 AGTCCGTTAC TTTTTCAT CT chr2L:5298065-5298185 31 6.74e-04 TTTCACTGTC TTTTTTTC AGTTTCTTCG chrX:8418557-8418677 110 7.13e-04 CCCTAACTGG TTTTTCTT GCA chr3L:4719946-4720066 55 7.54e-04 TTCAAGTTGC TTGTTTGT GTTTCGTCTT chrX:3161988-3162108 2 7.54e-04 C TTTTGTGG CATGGACACA chrX:13628078-13628198 43 7.54e-04 CTCAACTTCG TTGTTTGT CTGGGATTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:12674533-12674653 3.8e-05 50_[+3]_62 chrX:2918669-2918789 3.8e-05 37_[+3]_75 chr2R:8601938-8602058 3.8e-05 27_[+3]_85 chr3R:17062836-17062956 3.8e-05 72_[+3]_40 chr3L:14158277-14158397 3.8e-05 1_[+3]_111 chr3L:11421000-11421120 3.8e-05 27_[+3]_85 chr2L:2872328-2872448 3.8e-05 29_[+3]_83 chr3L:6807133-6807253 3.8e-05 15_[+3]_97 chr2L:1658376-1658496 3.8e-05 78_[+3]_34 chr3R:8879002-8879122 3.8e-05 26_[+3]_86 chr3R:26001458-26001578 3.8e-05 4_[+3]_108 chr3R:15205521-15205641 3.8e-05 111_[+3]_1 chr3R:24614778-24614898 3.8e-05 78_[+3]_34 chr2R:18573675-18573795 3.8e-05 86_[+3]_26 chr2L:15401997-15402117 3.8e-05 103_[+3]_9 chr2L:12608944-12609064 3.8e-05 102_[+3]_10 chr3R:8686567-8686687 3.8e-05 52_[+3]_60 chr2R:19419545-19419665 3.8e-05 36_[+3]_76 chr2R:14011766-14011886 3.8e-05 37_[+3]_75 chr3L:10234259-10234379 3.8e-05 58_[+3]_54 chr2R:17807383-17807503 3.8e-05 26_[+3]_86 chrX:11392983-11393103 3.8e-05 89_[+3]_23 chrX:20725481-20725601 3.8e-05 65_[+3]_47 chr2R:8635541-8635661 7.6e-05 90_[+3]_22 chr3L:16166749-16166869 7.6e-05 110_[+3]_2 chr2L:21806509-21806629 7.6e-05 6_[+3]_106 chr2L:3426770-3426890 7.6e-05 103_[+3]_9 chrX:17503180-17503300 7.6e-05 9_[+3]_103 chr2L:12566970-12567090 7.6e-05 27_[+3]_85 chr3L:5655198-5655318 0.00014 63_[+3]_49 chr3L:15777185-15777305 0.00014 72_[+3]_40 chr2R:12960449-12960569 0.00014 112_[+3] chr3L:6449309-6449429 0.00014 29_[+3]_83 chr3R:24773583-24773703 0.00014 104_[+3]_8 chr3L:17494083-17494203 0.00014 66_[+3]_46 chr2L:12613158-12613278 0.00014 48_[+3]_64 chr2L:12579279-12579399 0.00014 92_[+3]_20 chrX:7496732-7496852 0.00014 22_[+3]_90 chr2R:25236220-25236340 0.00014 92_[+3]_20 chr3R:19151038-19151158 0.00014 71_[+3]_41 chrX:14867094-14867214 0.00014 38_[+3]_74 chrX:7168142-7168262 0.00014 51_[+3]_61 chr2R:23572597-23572717 0.00014 32_[+3]_80 chr3L:7788172-7788292 0.00019 71_[+3]_41 chr2R:21714049-21714169 0.00019 9_[+3]_103 chr3L:14655653-14655773 0.00019 52_[+3]_60 chr2R:9558034-9558154 0.00019 82_[+3]_30 chr3R:24577711-24577831 0.00019 45_[+3]_67 chrX:1105651-1105771 0.00019 35_[+3]_77 chr2R:17816977-17817097 0.00019 52_[+3]_60 chr3L:18850121-18850241 0.00019 50_[+3]_62 chr2L:5418123-5418243 0.00019 68_[+3]_44 chr3L:10279627-10279747 0.00019 4_[+3]_108 chrX:8522655-8522775 0.00019 7_[+3]_105 chr3L:10281374-10281494 0.00019 112_[+3] chr3L:8833509-8833629 0.00022 98_[+3]_14 chr3R:5322379-5322499 0.00022 104_[+3]_8 chrX:18939602-18939722 0.00022 52_[+3]_60 chr3L:19199784-19199904 0.00024 51_[+3]_61 chr2R:8183888-8184008 0.00024 88_[+3]_24 chrX:4940772-4940892 0.00024 62_[+3]_50 chrX:17808658-17808778 0.00024 8_[+3]_104 chr2R:12460135-12460255 0.00027 38_[+3]_74 chr2R:10574014-10574134 0.00027 37_[+3]_75 chr3L:2584980-2585100 0.0003 59_[+3]_53 chr3L:4156598-4156718 0.0003 90_[+3]_22 chrX:17346208-17346328 0.00032 84_[+3]_28 chr3L:6788094-6788214 0.00032 67_[+3]_45 chr3L:10308565-10308685 0.00035 93_[+3]_19 chr2R:18374223-18374343 0.00035 19_[+3]_93 chr3R:19174651-19174771 0.00035 8_[+3]_104 chr2L:7809353-7809473 0.00037 48_[+3]_64 chr3L:10276645-10276765 0.00037 105_[+3]_7 chrX:3140071-3140191 0.00044 16_[+3]_96 chrX:10536366-10536486 0.00044 69_[+3]_43 chr3R:6921653-6921773 0.00044 83_[+3]_29 chr2R:11599752-11599872 0.00044 36_[+3]_76 chr3L:14592286-14592406 0.00044 24_[+3]_88 chr3L:10846847-10846967 0.00044 95_[+3]_17 chr3L:10771391-10771511 0.00056 48_[+3]_64 chr2L:1560261-1560381 0.00056 55_[+3]_57 chr2L:21795642-21795762 0.00056 97_[+3]_15 chr2R:19277509-19277629 0.00056 10_[+3]_102 chrX:7319853-7319973 0.00056 86_[+3]_26 chrX:4106386-4106506 0.00064 110_[+3]_2 chr2L:5298065-5298185 0.00067 30_[+3]_82 chrX:8418557-8418677 0.00071 109_[+3]_3 chr3L:4719946-4720066 0.00075 54_[+3]_58 chrX:3161988-3162108 0.00075 1_[+3]_111 chrX:13628078-13628198 0.00075 42_[+3]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTTTRT width=8 seqs=90 chr2L:12674533-12674653 ( 51) TTTTTTGT 1 chrX:2918669-2918789 ( 38) TTTTTTGT 1 chr2R:8601938-8602058 ( 28) TTTTTTGT 1 chr3R:17062836-17062956 ( 73) TTTTTTGT 1 chr3L:14158277-14158397 ( 2) TTTTTTGT 1 chr3L:11421000-11421120 ( 28) TTTTTTGT 1 chr2L:2872328-2872448 ( 30) TTTTTTGT 1 chr3L:6807133-6807253 ( 16) TTTTTTGT 1 chr2L:1658376-1658496 ( 79) TTTTTTGT 1 chr3R:8879002-8879122 ( 27) TTTTTTGT 1 chr3R:26001458-26001578 ( 5) TTTTTTGT 1 chr3R:15205521-15205641 ( 112) TTTTTTGT 1 chr3R:24614778-24614898 ( 79) TTTTTTGT 1 chr2R:18573675-18573795 ( 87) TTTTTTGT 1 chr2L:15401997-15402117 ( 104) TTTTTTGT 1 chr2L:12608944-12609064 ( 103) TTTTTTGT 1 chr3R:8686567-8686687 ( 53) TTTTTTGT 1 chr2R:19419545-19419665 ( 37) TTTTTTGT 1 chr2R:14011766-14011886 ( 38) TTTTTTGT 1 chr3L:10234259-10234379 ( 59) TTTTTTGT 1 chr2R:17807383-17807503 ( 27) TTTTTTGT 1 chrX:11392983-11393103 ( 90) TTTTTTGT 1 chrX:20725481-20725601 ( 66) TTTTTTGT 1 chr2R:8635541-8635661 ( 91) TTTTTTCT 1 chr3L:16166749-16166869 ( 111) TTTTTTCT 1 chr2L:21806509-21806629 ( 7) TTTTTTCT 1 chr2L:3426770-3426890 ( 104) TTTTTTCT 1 chrX:17503180-17503300 ( 10) TTTTTTCT 1 chr2L:12566970-12567090 ( 28) TTTTTTCT 1 chr3L:5655198-5655318 ( 64) TTTTTTAT 1 chr3L:15777185-15777305 ( 73) TTTTTTAT 1 chr2R:12960449-12960569 ( 113) TTTTTTAT 1 chr3L:6449309-6449429 ( 30) TTTTTTAT 1 chr3R:24773583-24773703 ( 105) TTTTTTAT 1 chr3L:17494083-17494203 ( 67) TTTTTTAT 1 chr2L:12613158-12613278 ( 49) TTTTTTAT 1 chr2L:12579279-12579399 ( 93) TTTTTTAT 1 chrX:7496732-7496852 ( 23) TTTTTTAT 1 chr2R:25236220-25236340 ( 93) TTTTTTAT 1 chr3R:19151038-19151158 ( 72) TTTTTTAT 1 chrX:14867094-14867214 ( 39) TTTTTTAT 1 chrX:7168142-7168262 ( 52) TTTTTTAT 1 chr2R:23572597-23572717 ( 33) TTTTTTAT 1 chr3L:7788172-7788292 ( 72) TTTTTTTT 1 chr2R:21714049-21714169 ( 10) TTTTTTTT 1 chr3L:14655653-14655773 ( 53) TTTTTTTT 1 chr2R:9558034-9558154 ( 83) TTTTTTTT 1 chr3R:24577711-24577831 ( 46) TTTTTTTT 1 chrX:1105651-1105771 ( 36) TTTTTTTT 1 chr2R:17816977-17817097 ( 53) TTTTTTTT 1 chr3L:18850121-18850241 ( 51) TTTTTTTT 1 chr2L:5418123-5418243 ( 69) TTTTTTTT 1 chr3L:10279627-10279747 ( 5) TTTTTTTT 1 chrX:8522655-8522775 ( 8) TTTTTTTT 1 chr3L:10281374-10281494 ( 113) TTTTTTTT 1 chr3L:8833509-8833629 ( 99) TTTTGTGT 1 chr3R:5322379-5322499 ( 105) TTTTGTGT 1 chrX:18939602-18939722 ( 53) TTTTGTGT 1 chr3L:19199784-19199904 ( 52) TTTTTTGG 1 chr2R:8183888-8184008 ( 89) TTTTTTGG 1 chrX:4940772-4940892 ( 63) TTTTTTGG 1 chrX:17808658-17808778 ( 9) TTTTTTGG 1 chr2R:12460135-12460255 ( 39) TTTTTTGC 1 chr2R:10574014-10574134 ( 38) TTTTTTGC 1 chr3L:2584980-2585100 ( 60) TTTTTCGT 1 chr3L:4156598-4156718 ( 91) TTTTTCGT 1 chrX:17346208-17346328 ( 85) TTTTGTCT 1 chr3L:6788094-6788214 ( 68) TTTTGTCT 1 chr3L:10308565-10308685 ( 94) TTTTTTCG 1 chr2R:18374223-18374343 ( 20) TTTTTTCG 1 chr3R:19174651-19174771 ( 9) TTTTTTCG 1 chr2L:7809353-7809473 ( 49) TTTTTTCC 1 chr3L:10276645-10276765 ( 106) TTTTTTCC 1 chrX:3140071-3140191 ( 17) TTTTTCCT 1 chrX:10536366-10536486 ( 70) TTTTGTAT 1 chr3R:6921653-6921773 ( 84) TTTTTCCT 1 chr2R:11599752-11599872 ( 37) TTTTTCCT 1 chr3L:14592286-14592406 ( 25) TTTTTCCT 1 chr3L:10846847-10846967 ( 96) TTTTGTAT 1 chr3L:10771391-10771511 ( 49) TTTTGTTT 1 chr2L:1560261-1560381 ( 56) TTTTGTTT 1 chr2L:21795642-21795762 ( 98) TTTTTTAC 1 chr2R:19277509-19277629 ( 11) TTTTTTAC 1 chrX:7319853-7319973 ( 87) TTTTTTAC 1 chrX:4106386-4106506 ( 111) TTTTTCAT 1 chr2L:5298065-5298185 ( 31) TTTTTTTC 1 chrX:8418557-8418677 ( 110) TTTTTCTT 1 chr3L:4719946-4720066 ( 55) TTGTTTGT 1 chrX:3161988-3162108 ( 2) TTTTGTGG 1 chrX:13628078-13628198 ( 43) TTGTTTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.1759 E= 2.1e-018 -1314 -1314 -1314 176 -1314 -1314 -1314 176 -1314 -1314 -312 173 -1314 -1314 -1314 176 -1314 -1314 -80 159 -1314 -116 -1314 163 -49 -7 109 -73 -1314 -116 -112 148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 90 E= 2.1e-018 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.022222 0.977778 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.111111 0.888889 0.000000 0.088889 0.000000 0.911111 0.222222 0.188889 0.411111 0.177778 0.000000 0.088889 0.088889 0.822222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTRT MEME-3 regular expression -------------------------------------------------------------------------------- TTTTTT[GA]T -------------------------------------------------------------------------------- Time 19.27 secs. ******************************************************************************** ******************************************************************************** MOTIF RCDGCWGC MEME-4 width = 8 sites = 61 llr = 496 E-value = 4.8e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 4:3::4:: pos.-specific C :61:a::a probability G 624a:1a: matrix T :22::4:: bits 2.4 ** ** 2.1 ** ** 1.9 ** ** 1.7 ** ** Relative 1.4 ** ** Entropy 1.2 ** ** (11.7 bits) 0.9 ** ** ** 0.7 ** ** ** 0.5 ** ***** 0.2 ******** 0.0 -------- Multilevel GCGGCAGC consensus AGA T sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:7293217-7293337 6 3.29e-06 CTGCT GCGGCTGC TTTCCATACT chr3R:12362099-12362219 70 3.29e-06 TCGCTTAACT GCGGCTGC GCAGCGGCTT chr3R:26917756-26917876 113 3.29e-06 GAGCTCATCG GCGGCTGC chr2R:23572597-23572717 82 3.29e-06 TATTGTTGCT GCGGCTGC TTtttttttt chr2R:19372177-19372297 38 6.79e-06 AACTCTCTAT GCGGCAGC CACACCCACT chrX:8857180-8857300 111 6.79e-06 ggcagaggca gcggcagc gg chr3L:18850121-18850241 62 1.21e-05 TTTTTTTTGC GCAGCTGC TCTGGGTTTT chrX:13244094-13244214 48 2.84e-05 AAAAAAAACG GCAGCAGC GAGTTTGAGG chr3L:6449309-6449429 70 2.84e-05 CCAGAATACG GGGGCTGC TGGCTGTCCA chr3R:27558484-27558604 47 2.84e-05 GAAAAAACTT GCAGCAGC AGgttttgtt chrX:2467090-2467210 1 2.84e-05 . GCGGCGGC TACCTAGCaa chrX:19827903-19828023 4 2.84e-05 GCT GCAGCAGC GGGCATTTCA chr2L:4221458-4221578 13 2.84e-05 GCTTGTAGCT GCAGCAGC AACGTTGTTG chrX:7496732-7496852 49 2.84e-05 AAACGAAGCA GCAGCAGC GAAAAAAATG chr3R:24172449-24172569 112 2.84e-05 AAACAAACGC ACGGCTGC G chr3R:19174651-19174771 89 2.84e-05 CAATACAATA GGGGCTGC ATGGGATGAG chr3L:3965358-3965478 1 4.25e-05 . GGGGCAGC AAACCGGGAA chr2L:10749780-10749900 7 4.25e-05 ACAAAA GGGGCAGC GTTTGTTTAT chr3R:24846351-24846471 34 4.25e-05 GCATCTACCT GCTGCTGC AATGAATGGA chr2R:21507137-21507257 26 4.25e-05 ccgctgctgc gctgctgc tgcCCAAAAA chr2R:10676279-10676399 34 4.25e-05 TCAGTTTTAT ACGGCAGC AGTGGTCCGT chrX:18939602-18939722 25 4.25e-05 tgttcttgtt gctgctgc tgttgttgtt chr3L:14681603-14681723 92 4.25e-05 ACGGCAAAAA GCTGCTGC ACTCTCCCTA chr2R:14975802-14975922 107 5.12e-05 AATGATGGCT GCCGCTGC TGTTTA chrX:1607951-1608071 77 5.12e-05 TGGCgtcgct gccgctgc cacagcctcc chr2R:19670586-19670706 20 7.69e-05 GCACCATCAA ACAGCTGC TTGCTATCGA chr3L:4360445-4360565 96 7.69e-05 AGACGGCAAT GCAGCGGC TGAGAGAGAC chr2R:18664284-18664404 97 7.69e-05 AGAACAACAA GTGGCTGC TATACCCCCA chr3L:6342593-6342713 17 7.69e-05 CCAATAATTT GTGGCTGC AGTCTGGCGG chrX:17733971-17734091 28 7.69e-05 aaaaaCACCC ACAGCTGC TCATACATAA chr2R:10548187-10548307 31 7.69e-05 GTGAAACCCA ACAGCTGC AGATCAGGAT chr3R:22150581-22150701 103 1.07e-04 TTTAAACATT GTGGCAGC CGCAGGAAAA chr3R:23131058-23131178 54 1.07e-04 acaacaaaag acagcagc aacaTTGGTA chr2L:11296606-11296726 90 1.07e-04 AACACAAACA ACGGCGGC CAAGGAAAAC chr3L:6943207-6943327 12 1.07e-04 GCGAAATAAA ACGGCGGC CAGCCGAAAA chr2R:17621660-17621780 7 1.07e-04 GTAAAC ACAGCAGC AACTACGGGG chr3L:10276645-10276765 14 1.07e-04 ATTTGCATAC ACAGCAGC TGAAACAGGA chrX:8644171-8644291 66 1.29e-04 GAGATTCGGC AGGGCAGC GATAAAAGAA chrX:8295961-8296081 81 1.54e-04 aaaaatgaga actgcagc ccgcatacaa chr2R:19153799-19153919 38 1.54e-04 AATCATTTAA GCCGCGGC ACACGCTCTG chrX:2964841-2964961 48 1.54e-04 ACCACATGAC ACTGCAGC CGCGTTGCAG chr3R:19172923-19173043 70 1.54e-04 AGATCATTTC GGTGCAGC AGAAAGGCGT chr3R:15671259-15671379 13 1.63e-04 AAAAAACACA ACCGCAGC CAAAAAAAAA chr3R:31321676-31321796 107 1.78e-04 GACCGGGTCT GTAGCTGC CGAAGT chr3L:15777185-15777305 64 1.78e-04 ATCCCTCGCA GTAGCTGC ATTTTTTATA chrX:1105651-1105771 106 1.78e-04 TTTTTTTGGC CCGGCAGC ATTTGCT chr3R:11285440-11285560 54 2.15e-04 TTTTTCCACA ATGGCTGC CATGTTTCCT chr3L:732694-732814 9 2.43e-04 AGCAGCAC AGAGCAGC AACATTCCaa chrX:9122900-9123020 15 2.43e-04 TACGGATCTA ATGGCAGC CAAGTGGCCA chrX:4106386-4106506 61 2.43e-04 GATTGCGAAA ATGGCAGC GGATTTGTTA chrX:6702663-6702783 105 2.43e-04 caacaacaat agagcagc GTACTAAA chr3L:10771391-10771511 93 2.72e-04 TTGTTTTTCA GTTGCAGC GACGTCGTCG chr3L:10297927-10298047 106 2.72e-04 TCAGACAATG GGTGCGGC CCGAAGG chr3L:4168549-4168669 11 2.72e-04 ATTTGAATAA AGTGCTGC ATAAAAAAAA chr2R:15915211-15915331 5 2.72e-04 CTTG GTCGCTGC TTCTGCTGAC chr3L:14158277-14158397 36 2.97e-04 AGTTGAAGGG GGCGCGGC AGGCACATAA chr2R:16211962-16212082 7 2.97e-04 GGTTTC AGTGCAGC ATATCTAATC chr2R:18573675-18573795 51 2.97e-04 TGGGCATTCA AGCGCTGC CTATAAAATT chrX:6004782-6004902 32 3.03e-04 TTTCCGCCGA AGCGCAGC CGTTTGAACC chr2L:12686948-12687068 36 3.46e-04 GGATTTTCCC CCTGCTGC CAAAAGTTTG chr3L:14592286-14592406 11 3.46e-04 ATGGTCCGCC CCTGCTGC CTGTTGTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:7293217-7293337 3.3e-06 5_[+4]_107 chr3R:12362099-12362219 3.3e-06 69_[+4]_43 chr3R:26917756-26917876 3.3e-06 112_[+4] chr2R:23572597-23572717 3.3e-06 81_[+4]_31 chr2R:19372177-19372297 6.8e-06 37_[+4]_75 chrX:8857180-8857300 6.8e-06 110_[+4]_2 chr3L:18850121-18850241 1.2e-05 61_[+4]_51 chrX:13244094-13244214 2.8e-05 47_[+4]_65 chr3L:6449309-6449429 2.8e-05 69_[+4]_43 chr3R:27558484-27558604 2.8e-05 46_[+4]_66 chrX:2467090-2467210 2.8e-05 [+4]_112 chrX:19827903-19828023 2.8e-05 3_[+4]_109 chr2L:4221458-4221578 2.8e-05 12_[+4]_100 chrX:7496732-7496852 2.8e-05 48_[+4]_64 chr3R:24172449-24172569 2.8e-05 111_[+4]_1 chr3R:19174651-19174771 2.8e-05 88_[+4]_24 chr3L:3965358-3965478 4.2e-05 [+4]_112 chr2L:10749780-10749900 4.2e-05 6_[+4]_106 chr3R:24846351-24846471 4.2e-05 33_[+4]_79 chr2R:21507137-21507257 4.2e-05 25_[+4]_87 chr2R:10676279-10676399 4.2e-05 33_[+4]_79 chrX:18939602-18939722 4.2e-05 24_[+4]_88 chr3L:14681603-14681723 4.2e-05 91_[+4]_21 chr2R:14975802-14975922 5.1e-05 106_[+4]_6 chrX:1607951-1608071 5.1e-05 76_[+4]_36 chr2R:19670586-19670706 7.7e-05 19_[+4]_93 chr3L:4360445-4360565 7.7e-05 95_[+4]_17 chr2R:18664284-18664404 7.7e-05 96_[+4]_16 chr3L:6342593-6342713 7.7e-05 16_[+4]_96 chrX:17733971-17734091 7.7e-05 27_[+4]_85 chr2R:10548187-10548307 7.7e-05 30_[+4]_82 chr3R:22150581-22150701 0.00011 102_[+4]_10 chr3R:23131058-23131178 0.00011 53_[+4]_59 chr2L:11296606-11296726 0.00011 89_[+4]_23 chr3L:6943207-6943327 0.00011 11_[+4]_101 chr2R:17621660-17621780 0.00011 6_[+4]_106 chr3L:10276645-10276765 0.00011 13_[+4]_99 chrX:8644171-8644291 0.00013 65_[+4]_47 chrX:8295961-8296081 0.00015 80_[+4]_32 chr2R:19153799-19153919 0.00015 37_[+4]_75 chrX:2964841-2964961 0.00015 47_[+4]_65 chr3R:19172923-19173043 0.00015 69_[+4]_43 chr3R:15671259-15671379 0.00016 12_[+4]_100 chr3R:31321676-31321796 0.00018 106_[+4]_6 chr3L:15777185-15777305 0.00018 63_[+4]_49 chrX:1105651-1105771 0.00018 105_[+4]_7 chr3R:11285440-11285560 0.00021 53_[+4]_59 chr3L:732694-732814 0.00024 8_[+4]_104 chrX:9122900-9123020 0.00024 14_[+4]_98 chrX:4106386-4106506 0.00024 60_[+4]_52 chrX:6702663-6702783 0.00024 104_[+4]_8 chr3L:10771391-10771511 0.00027 92_[+4]_20 chr3L:10297927-10298047 0.00027 105_[+4]_7 chr3L:4168549-4168669 0.00027 10_[+4]_102 chr2R:15915211-15915331 0.00027 4_[+4]_108 chr3L:14158277-14158397 0.0003 35_[+4]_77 chr2R:16211962-16212082 0.0003 6_[+4]_106 chr2R:18573675-18573795 0.0003 50_[+4]_62 chrX:6004782-6004902 0.0003 31_[+4]_81 chr2L:12686948-12687068 0.00035 35_[+4]_77 chr3L:14592286-14592406 0.00035 10_[+4]_102 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCDGCWGC width=8 seqs=61 chr2L:7293217-7293337 ( 6) GCGGCTGC 1 chr3R:12362099-12362219 ( 70) GCGGCTGC 1 chr3R:26917756-26917876 ( 113) GCGGCTGC 1 chr2R:23572597-23572717 ( 82) GCGGCTGC 1 chr2R:19372177-19372297 ( 38) GCGGCAGC 1 chrX:8857180-8857300 ( 111) GCGGCAGC 1 chr3L:18850121-18850241 ( 62) GCAGCTGC 1 chrX:13244094-13244214 ( 48) GCAGCAGC 1 chr3L:6449309-6449429 ( 70) GGGGCTGC 1 chr3R:27558484-27558604 ( 47) GCAGCAGC 1 chrX:2467090-2467210 ( 1) GCGGCGGC 1 chrX:19827903-19828023 ( 4) GCAGCAGC 1 chr2L:4221458-4221578 ( 13) GCAGCAGC 1 chrX:7496732-7496852 ( 49) GCAGCAGC 1 chr3R:24172449-24172569 ( 112) ACGGCTGC 1 chr3R:19174651-19174771 ( 89) GGGGCTGC 1 chr3L:3965358-3965478 ( 1) GGGGCAGC 1 chr2L:10749780-10749900 ( 7) GGGGCAGC 1 chr3R:24846351-24846471 ( 34) GCTGCTGC 1 chr2R:21507137-21507257 ( 26) GCTGCTGC 1 chr2R:10676279-10676399 ( 34) ACGGCAGC 1 chrX:18939602-18939722 ( 25) GCTGCTGC 1 chr3L:14681603-14681723 ( 92) GCTGCTGC 1 chr2R:14975802-14975922 ( 107) GCCGCTGC 1 chrX:1607951-1608071 ( 77) GCCGCTGC 1 chr2R:19670586-19670706 ( 20) ACAGCTGC 1 chr3L:4360445-4360565 ( 96) GCAGCGGC 1 chr2R:18664284-18664404 ( 97) GTGGCTGC 1 chr3L:6342593-6342713 ( 17) GTGGCTGC 1 chrX:17733971-17734091 ( 28) ACAGCTGC 1 chr2R:10548187-10548307 ( 31) ACAGCTGC 1 chr3R:22150581-22150701 ( 103) GTGGCAGC 1 chr3R:23131058-23131178 ( 54) ACAGCAGC 1 chr2L:11296606-11296726 ( 90) ACGGCGGC 1 chr3L:6943207-6943327 ( 12) ACGGCGGC 1 chr2R:17621660-17621780 ( 7) ACAGCAGC 1 chr3L:10276645-10276765 ( 14) ACAGCAGC 1 chrX:8644171-8644291 ( 66) AGGGCAGC 1 chrX:8295961-8296081 ( 81) ACTGCAGC 1 chr2R:19153799-19153919 ( 38) GCCGCGGC 1 chrX:2964841-2964961 ( 48) ACTGCAGC 1 chr3R:19172923-19173043 ( 70) GGTGCAGC 1 chr3R:15671259-15671379 ( 13) ACCGCAGC 1 chr3R:31321676-31321796 ( 107) GTAGCTGC 1 chr3L:15777185-15777305 ( 64) GTAGCTGC 1 chrX:1105651-1105771 ( 106) CCGGCAGC 1 chr3R:11285440-11285560 ( 54) ATGGCTGC 1 chr3L:732694-732814 ( 9) AGAGCAGC 1 chrX:9122900-9123020 ( 15) ATGGCAGC 1 chrX:4106386-4106506 ( 61) ATGGCAGC 1 chrX:6702663-6702783 ( 105) AGAGCAGC 1 chr3L:10771391-10771511 ( 93) GTTGCAGC 1 chr3L:10297927-10298047 ( 106) GGTGCGGC 1 chr3L:4168549-4168669 ( 11) AGTGCTGC 1 chr2R:15915211-15915331 ( 5) GTCGCTGC 1 chr3L:14158277-14158397 ( 36) GGCGCGGC 1 chr2R:16211962-16212082 ( 7) AGTGCAGC 1 chr2R:18573675-18573795 ( 51) AGCGCTGC 1 chrX:6004782-6004902 ( 32) AGCGCAGC 1 chr2L:12686948-12687068 ( 36) CCTGCTGC 1 chr3L:14592286-14592406 ( 11) CCTGCTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.8403 E= 4.8e-013 27 -202 157 -1257 -1257 161 25 -85 -17 -60 96 -47 -1257 -1257 237 -1257 -1257 233 -1257 -1257 50 -1257 -75 59 -1257 -1257 237 -1257 -1257 233 -1257 -1257 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 61 E= 4.8e-013 0.377049 0.049180 0.573770 0.000000 0.000000 0.606557 0.229508 0.163934 0.278689 0.131148 0.377049 0.213115 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.442623 0.000000 0.114754 0.442623 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCDGCWGC MEME-4 regular expression -------------------------------------------------------------------------------- [GA][CG][GAT]GC[AT]GC -------------------------------------------------------------------------------- Time 24.87 secs. ******************************************************************************** ******************************************************************************** MOTIF CRCACACA MEME-5 width = 8 sites = 50 llr = 409 E-value = 5.3e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :6:8:619 pos.-specific C a:a1819: probability G :4::22:1 matrix T :::1:::: bits 2.4 * * 2.1 * * 1.9 * * * 1.7 * * * * Relative 1.4 * * * * Entropy 1.2 * * * ** (11.8 bits) 0.9 ***** ** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CACACACA consensus G GG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:17346208-17346328 42 2.44e-05 actcgctctc CACACACA TAATTAGCAC chrX:9666584-9666704 72 2.44e-05 cgctctcttt cACACACA TAACTTTGTT chr3L:8833509-8833629 54 2.44e-05 TGAACAGACA CACACACA AACACTGTGA chr3R:6934062-6934182 79 2.44e-05 TCGAAGAGCA CGCACACa aaaaaaaaaa chr3R:25591038-25591158 30 2.44e-05 GCCCACCACA CACACACA CATGCGTTCC chr3L:10247243-10247363 38 2.44e-05 GCAAAGCAAA CACACACA AGCACATCGA chrX:19827903-19828023 50 2.44e-05 GAGATTAaca cacacaca cacatacaca chr2L:4221458-4221578 66 2.44e-05 AACGGCGACA CACACACA CACATATAGC chr3L:698654-698774 11 2.44e-05 TTCAAAGGCG CGCACACA ACAACAAACT chr3L:15540834-15540954 65 2.44e-05 TTTGTGCCCC CACACACA TAGTATTGGT chrX:5056117-5056237 17 2.44e-05 GATATGcaca cacacaca cacacaacaG chrX:17578958-17579078 8 2.44e-05 ACTCGCA CGCACACA AACACAACAA chr3R:30414614-30414734 104 2.44e-05 CAACAAAAGT CACACACA GATACGGAT chr2R:25128138-25128258 43 2.44e-05 TGCTAAAGGG CGCACACA ATCAATTCGT chr3R:7282630-7282750 92 2.44e-05 GACAAACCCA CGCACACA AGCACATGGC chr3L:21194556-21194676 101 3.95e-05 AGTTTTTGTG CGCACGCA ACAAAGGAAC chrX:8644171-8644291 21 3.95e-05 TGCTCACGCG CACACGCA AATTAATAAC chrX:6868891-6869011 12 3.95e-05 CGCGCATTAA CACACGCA CACTTGCAAA chrX:17503180-17503300 43 3.95e-05 AATGCATTTC CACACGCA AATGAAATCG chr3L:8569614-8569734 90 5.50e-05 TTTAACCGAA CGCACCCA TGAAAAGCCC chr2R:19372177-19372297 46 5.50e-05 ATGCGGCAGC CACACCCA CTTAATATTC chrX:8522655-8522775 59 5.50e-05 tattATCGGA CACACCCA GTGAGAAAAA chr3L:10846847-10846967 60 5.50e-05 GTGTACACCC CACACCCA ACCTCTGGCA chr3L:16166749-16166869 42 7.01e-05 GAATTGTGTA CACACACG ACGAGACGGA chrX:6702663-6702783 58 7.01e-05 AACAAGgcaa cacacacg gcattagcaa chr3R:15671259-15671379 72 7.01e-05 AAACACGAAG CACACACG CTGAAAAAAC chr3L:10309655-10309775 63 9.39e-05 aaacaacaac cacagaca caTGAAAATT chr3R:17712485-17712605 12 9.39e-05 CAAGCCGGCA CACAGACA TCAACTCTCT chr2R:21885902-21886022 73 9.39e-05 AATACACTGC CGCAGACA GGGGAGTGAA chrX:7168142-7168262 43 9.39e-05 AAAAAAACTA CGCAGACA GTTTTTTATG chr3L:14655653-14655773 83 1.17e-04 GCTTTGTTGC CACTCACA GCTTGACTTT chr2R:14011766-14011886 113 1.17e-04 AGTTCAGTTT CACTCACA chr3L:11421000-11421120 74 1.26e-04 TGCCACCCGC CGCACGCG TCGCCATCGC chr2L:7546015-7546135 102 1.26e-04 AAGGCGCTTG CGCACGCG TTTCTCACCC chr3L:732694-732814 113 1.41e-04 GAAAACCGAG CGCAGGCA chr3R:6921653-6921773 58 1.41e-04 ACATCGTAAT CGCAGGCA CCACAAAAAC chrX:6991427-6991547 9 1.71e-04 GTCGGCCA CGCCCACA CGCCCCTCCG chr3L:8078138-8078258 53 1.71e-04 ATCAGACGAA CGCCCACA GTAAATAAAT chr3L:10517719-10517839 110 1.71e-04 ccgtctcgct cgctcgca cgT chr2R:25239622-25239742 8 2.05e-04 TGACCGA CACAGCCA AAAGTGGCTG chr2R:8183888-8184008 79 2.05e-04 ATTGTGCAGG CACCCGCA GCTTTTTTGG chrX:10536366-10536486 2 2.73e-04 g cacacaaa aaTATGAAAG chr3L:6342593-6342713 54 2.73e-04 GAAAAAACAC CACACAAA GAGGGAACAA chr3R:25464100-25464220 105 2.73e-04 ACCAGAAAGT CACTCCCA TATGTCAA chr3R:24172449-24172569 80 2.73e-04 GCCCGCCAAA CACACAAA ACAAAAGCCA chr2L:19217118-19217238 19 2.87e-04 ATATCCTAAG CACTCACG GCTGAGCAAA chr3L:15777185-15777305 84 3.09e-04 TTTTTATACC CGCTGACA GCACAAAAAA chr2R:9558034-9558154 98 3.09e-04 TTTGGCGACT CGCTGACA CGCTGGCCTC chr2L:5418123-5418243 18 3.18e-04 AGACCGATCT CGCAGGCG GCACAACCTT chrX:9122900-9123020 68 3.52e-04 TCCAAAAAAA CACACGAA AGGCTAACAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:17346208-17346328 2.4e-05 41_[+5]_71 chrX:9666584-9666704 2.4e-05 71_[+5]_41 chr3L:8833509-8833629 2.4e-05 53_[+5]_59 chr3R:6934062-6934182 2.4e-05 78_[+5]_34 chr3R:25591038-25591158 2.4e-05 29_[+5]_83 chr3L:10247243-10247363 2.4e-05 37_[+5]_75 chrX:19827903-19828023 2.4e-05 49_[+5]_63 chr2L:4221458-4221578 2.4e-05 65_[+5]_47 chr3L:698654-698774 2.4e-05 10_[+5]_102 chr3L:15540834-15540954 2.4e-05 64_[+5]_48 chrX:5056117-5056237 2.4e-05 16_[+5]_96 chrX:17578958-17579078 2.4e-05 7_[+5]_105 chr3R:30414614-30414734 2.4e-05 103_[+5]_9 chr2R:25128138-25128258 2.4e-05 42_[+5]_70 chr3R:7282630-7282750 2.4e-05 91_[+5]_21 chr3L:21194556-21194676 3.9e-05 100_[+5]_12 chrX:8644171-8644291 3.9e-05 20_[+5]_92 chrX:6868891-6869011 3.9e-05 11_[+5]_101 chrX:17503180-17503300 3.9e-05 42_[+5]_70 chr3L:8569614-8569734 5.5e-05 89_[+5]_23 chr2R:19372177-19372297 5.5e-05 45_[+5]_67 chrX:8522655-8522775 5.5e-05 58_[+5]_54 chr3L:10846847-10846967 5.5e-05 59_[+5]_53 chr3L:16166749-16166869 7e-05 41_[+5]_71 chrX:6702663-6702783 7e-05 57_[+5]_55 chr3R:15671259-15671379 7e-05 71_[+5]_41 chr3L:10309655-10309775 9.4e-05 62_[+5]_50 chr3R:17712485-17712605 9.4e-05 11_[+5]_101 chr2R:21885902-21886022 9.4e-05 72_[+5]_40 chrX:7168142-7168262 9.4e-05 42_[+5]_70 chr3L:14655653-14655773 0.00012 82_[+5]_30 chr2R:14011766-14011886 0.00012 112_[+5] chr3L:11421000-11421120 0.00013 73_[+5]_39 chr2L:7546015-7546135 0.00013 101_[+5]_11 chr3L:732694-732814 0.00014 112_[+5] chr3R:6921653-6921773 0.00014 57_[+5]_55 chrX:6991427-6991547 0.00017 8_[+5]_104 chr3L:8078138-8078258 0.00017 52_[+5]_60 chr3L:10517719-10517839 0.00017 109_[+5]_3 chr2R:25239622-25239742 0.00021 7_[+5]_105 chr2R:8183888-8184008 0.00021 78_[+5]_34 chrX:10536366-10536486 0.00027 1_[+5]_111 chr3L:6342593-6342713 0.00027 53_[+5]_59 chr3R:25464100-25464220 0.00027 104_[+5]_8 chr3R:24172449-24172569 0.00027 79_[+5]_33 chr2L:19217118-19217238 0.00029 18_[+5]_94 chr3L:15777185-15777305 0.00031 83_[+5]_29 chr2R:9558034-9558154 0.00031 97_[+5]_15 chr2L:5418123-5418243 0.00032 17_[+5]_95 chrX:9122900-9123020 0.00035 67_[+5]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CRCACACA width=8 seqs=50 chrX:17346208-17346328 ( 42) CACACACA 1 chrX:9666584-9666704 ( 72) CACACACA 1 chr3L:8833509-8833629 ( 54) CACACACA 1 chr3R:6934062-6934182 ( 79) CGCACACA 1 chr3R:25591038-25591158 ( 30) CACACACA 1 chr3L:10247243-10247363 ( 38) CACACACA 1 chrX:19827903-19828023 ( 50) CACACACA 1 chr2L:4221458-4221578 ( 66) CACACACA 1 chr3L:698654-698774 ( 11) CGCACACA 1 chr3L:15540834-15540954 ( 65) CACACACA 1 chrX:5056117-5056237 ( 17) CACACACA 1 chrX:17578958-17579078 ( 8) CGCACACA 1 chr3R:30414614-30414734 ( 104) CACACACA 1 chr2R:25128138-25128258 ( 43) CGCACACA 1 chr3R:7282630-7282750 ( 92) CGCACACA 1 chr3L:21194556-21194676 ( 101) CGCACGCA 1 chrX:8644171-8644291 ( 21) CACACGCA 1 chrX:6868891-6869011 ( 12) CACACGCA 1 chrX:17503180-17503300 ( 43) CACACGCA 1 chr3L:8569614-8569734 ( 90) CGCACCCA 1 chr2R:19372177-19372297 ( 46) CACACCCA 1 chrX:8522655-8522775 ( 59) CACACCCA 1 chr3L:10846847-10846967 ( 60) CACACCCA 1 chr3L:16166749-16166869 ( 42) CACACACG 1 chrX:6702663-6702783 ( 58) CACACACG 1 chr3R:15671259-15671379 ( 72) CACACACG 1 chr3L:10309655-10309775 ( 63) CACAGACA 1 chr3R:17712485-17712605 ( 12) CACAGACA 1 chr2R:21885902-21886022 ( 73) CGCAGACA 1 chrX:7168142-7168262 ( 43) CGCAGACA 1 chr3L:14655653-14655773 ( 83) CACTCACA 1 chr2R:14011766-14011886 ( 113) CACTCACA 1 chr3L:11421000-11421120 ( 74) CGCACGCG 1 chr2L:7546015-7546135 ( 102) CGCACGCG 1 chr3L:732694-732814 ( 113) CGCAGGCA 1 chr3R:6921653-6921773 ( 58) CGCAGGCA 1 chrX:6991427-6991547 ( 9) CGCCCACA 1 chr3L:8078138-8078258 ( 53) CGCCCACA 1 chr3L:10517719-10517839 ( 110) CGCTCGCA 1 chr2R:25239622-25239742 ( 8) CACAGCCA 1 chr2R:8183888-8184008 ( 79) CACCCGCA 1 chrX:10536366-10536486 ( 2) CACACAAA 1 chr3L:6342593-6342713 ( 54) CACACAAA 1 chr3R:25464100-25464220 ( 105) CACTCCCA 1 chr3R:24172449-24172569 ( 80) CACACAAA 1 chr2L:19217118-19217238 ( 19) CACTCACG 1 chr3L:15777185-15777305 ( 84) CGCTGACA 1 chr2R:9558034-9558154 ( 98) CGCTGACA 1 chr2L:5418123-5418243 ( 18) CGCAGGCG 1 chrX:9122900-9123020 ( 68) CACACGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.2738 E= 5.3e-004 -1229 233 -1229 -1229 99 -1229 97 -1229 -1229 233 -1229 -1229 135 -173 -1229 -107 -1229 201 5 -1229 103 -73 31 -1229 -197 221 -1229 -1229 146 -1229 -47 -1229 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 50 E= 5.3e-004 0.000000 1.000000 0.000000 0.000000 0.620000 0.000000 0.380000 0.000000 0.000000 1.000000 0.000000 0.000000 0.800000 0.060000 0.000000 0.140000 0.000000 0.800000 0.200000 0.000000 0.640000 0.120000 0.240000 0.000000 0.080000 0.920000 0.000000 0.000000 0.860000 0.000000 0.140000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CRCACACA MEME-5 regular expression -------------------------------------------------------------------------------- C[AG]CA[CG][AG]CA -------------------------------------------------------------------------------- Time 30.37 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:7319853-7319973 1.23e-02 79_[+3(3.77e-05)]_33 chrX:20725481-20725601 1.76e-05 18_[+5(2.44e-05)]_39_[+3(3.77e-05)]_\ 5_[+3(7.64e-05)]_34 chr3R:19174651-19174771 1.24e-03 88_[+4(2.84e-05)]_24 chr3R:7282630-7282750 1.87e-03 91_[+5(2.44e-05)]_21 chrX:12941139-12941259 1.98e-02 22_[+1(9.21e-05)]_3_[+1(9.21e-05)]_\ 79 chr3L:10846847-10846967 1.44e-03 59_[+5(5.50e-05)]_9_[+1(9.21e-05)]_\ 36 chr3R:15671259-15671379 2.77e-03 21_[+1(9.21e-05)]_42_[+5(7.01e-05)]_\ 41 chrX:17808658-17808778 4.16e-02 50_[+2(5.74e-05)]_62 chr3L:10281374-10281494 2.28e-03 7_[+1(9.21e-05)]_47_[+2(5.74e-05)]_\ 42_[+2(5.74e-05)] chrX:11392983-11393103 1.77e-03 74_[+2(5.74e-05)]_7_[+3(3.77e-05)]_\ 3_[+2(5.74e-05)]_12 chr3R:10656723-10656843 3.15e-01 47_[+1(9.21e-05)]_44_[+1(9.21e-05)]_\ 3_[+1(9.21e-05)]_2 chr2R:18374223-18374343 1.76e-02 1_[+2(5.74e-05)]_111 chr2R:25128138-25128258 1.99e-03 42_[+5(2.44e-05)]_39_[+1(9.21e-05)]_\ 23 chrX:8522655-8522775 2.95e-05 7_[+2(5.74e-05)]_8_[+2(5.74e-05)]_\ [+3(3.77e-05)]_19_[+5(5.50e-05)]_31_[+3(7.64e-05)]_15 chr2R:23800468-23800588 3.65e-01 120 chrX:909042-909162 7.04e-03 79_[+1(9.21e-05)]_33 chr3R:16503451-16503571 1.25e-01 37_[+1(9.21e-05)]_75 chr3L:10338192-10338312 2.69e-01 120 chr2R:17807383-17807503 1.53e-02 [+2(5.74e-05)]_18_[+3(3.77e-05)]_86 chr3L:8374244-8374364 1.14e-01 [+1(9.21e-05)]_91_[+1(9.21e-05)]_13 chr2R:19277509-19277629 8.98e-03 78_[+1(9.21e-05)]_34 chrX:18933612-18933732 9.34e-02 [+1(9.21e-05)]_112 chr3L:10279627-10279747 6.13e-03 3_[+2(5.74e-05)]_11_[+2(5.74e-05)]_\ 90 chr2L:7546015-7546135 9.65e-02 120 chr3R:30414614-30414734 1.02e-04 41_[+2(5.74e-05)]_54_[+5(2.44e-05)]_\ 9 chr3L:14681603-14681723 1.67e-03 91_[+4(4.25e-05)]_21 chr3L:10276645-10276765 5.79e-04 45_[+2(5.74e-05)]_67 chrX:17578958-17579078 1.58e-02 7_[+5(2.44e-05)]_13_[+1(9.21e-05)]_\ 5_[+1(9.21e-05)]_3_[+5(3.95e-05)]_60 chr2R:23572597-23572717 9.98e-05 81_[+4(3.29e-06)]_[+2(5.74e-05)]_23 chr3R:24172449-24172569 2.08e-03 41_[+1(9.21e-05)]_[+1(9.21e-05)]_54_\ [+4(2.84e-05)]_1 chrX:1607951-1608071 8.58e-04 76_[+4(5.12e-05)]_36 chr3L:10308565-10308685 2.77e-02 69_[+2(5.74e-05)]_43 chrX:7168142-7168262 6.02e-04 29_[+1(9.21e-05)]_5_[+5(9.39e-05)]_\ 70 chr3L:17499839-17499959 3.85e-03 59_[+2(5.74e-05)]_53 chr3L:6342392-6342512 1.99e-02 61_[+2(5.74e-05)]_51 chr2L:8550736-8550856 1.91e-01 120 chr2R:10548187-10548307 1.88e-02 9_[+1(9.21e-05)]_13_[+4(7.69e-05)]_\ 82 chr2L:4906202-4906322 4.35e-04 95_[+2(9.51e-05)]_17 chr2R:10574014-10574134 7.30e-03 52_[+2(5.74e-05)]_60 chr2R:25236890-25237010 8.47e-01 120 chr3L:10234259-10234379 1.08e-02 5_[+2(5.74e-05)]_3_[+3(3.77e-05)]_\ 34_[+3(3.77e-05)]_54 chr3R:19172923-19173043 2.13e-01 120 chr3R:13947520-13947640 2.69e-01 37_[+1(9.21e-05)]_[+1(9.21e-05)]_67 chr3L:14164091-14164211 8.73e-02 5_[+1(9.21e-05)]_107 chr3L:4156598-4156718 1.38e-02 48_[+1(9.21e-05)]_64 chr2L:5418123-5418243 7.54e-04 66_[+2(5.74e-05)]_10_[+3(3.77e-05)]_\ 28 chr2R:15915211-15915331 6.98e-02 31_[+1(9.21e-05)]_37_[+1(9.21e-05)]_\ 36 chrX:14867094-14867214 2.53e-02 45_[+2(5.74e-05)]_67 chr3L:14592286-14592406 3.49e-04 31_[+2(5.74e-05)]_81 chr2L:12566970-12567090 3.15e-03 27_[+3(7.64e-05)]_2_[+2(5.74e-05)]_\ 75 chr2L:21795642-21795762 9.49e-02 80_[+2(9.51e-05)]_32 chr3R:19174852-19174972 5.03e-03 46_[+3(3.77e-05)]_66 chr3L:12107515-12107635 1.44e-02 54_[+3(3.77e-05)]_58 chrX:7486424-7486544 1.43e-03 110_[+2(5.74e-05)]_2 chr2R:10013714-10013834 2.71e-01 45_[+1(9.21e-05)]_17_[+1(9.21e-05)]_\ 42 chrX:5056117-5056237 1.54e-02 12_[+5(2.44e-05)]_[+5(2.44e-05)]_28_\ [+1(9.21e-05)]_5_[+1(9.21e-05)]_43 chrX:18939602-18939722 3.79e-04 24_[+4(4.25e-05)]_44_[+3(3.77e-05)]_\ 36 chr3L:10517719-10517839 4.19e-01 120 chr2R:14011766-14011886 4.47e-05 37_[+3(3.77e-05)]_32_[+3(3.77e-05)]_\ 35 chr3R:19151038-19151158 3.93e-02 30_[+2(5.74e-05)]_82 chr3L:15201492-15201612 2.50e-01 89_[+1(9.21e-05)]_23 chrX:6702663-6702783 3.68e-03 1_[+1(9.21e-05)]_32_[+1(9.21e-05)]_\ 8_[+5(7.01e-05)]_55 chr3L:18850121-18850241 4.06e-04 12_[+2(5.74e-05)]_[+2(5.74e-05)]_21_\ [+2(5.74e-05)]_4_[+4(1.21e-05)]_51 chr3L:10809123-10809243 2.14e-03 99_[+3(3.77e-05)]_13 chr2R:19419545-19419665 1.77e-03 36_[+3(3.77e-05)]_8_[+2(5.74e-05)]_\ 60 chr3R:8686567-8686687 1.15e-02 52_[+3(3.77e-05)]_24_[+3(3.77e-05)]_\ 28 chr2R:25236220-25236340 1.84e-04 48_[+1(9.21e-05)]_19_[+2(5.74e-05)]_\ 37 chrX:17503180-17503300 2.99e-05 2_[+3(7.64e-05)]_32_[+5(3.95e-05)]_\ 47_[+1(9.21e-05)]_15 chrX:8535956-8536076 2.00e-03 13_[+1(9.21e-05)]_63_[+2(5.74e-05)]_\ 28 chr3R:25464100-25464220 6.70e-02 3_[+1(9.21e-05)]_109 chr3L:15227807-15227927 3.76e-01 58_[+1(9.21e-05)]_8_[+1(9.21e-05)]_\ 38 chr3R:6436062-6436182 3.69e-01 60_[+1(9.21e-05)]_52 chr3L:15537115-15537235 1.59e-01 56_[+1(9.21e-05)]_56 chr2R:7008714-7008834 2.81e-02 53_[+2(5.74e-05)]_[+2(5.74e-05)]_51 chr2L:12608944-12609064 3.21e-03 23_[+2(5.74e-05)]_71_[+3(3.77e-05)]_\ 10 chr2R:25238878-25238998 2.68e-04 39_[+3(3.77e-05)]_22_[+1(9.21e-05)]_\ 43 chr2R:17816977-17817097 4.04e-05 52_[+2(5.74e-05)]_24_[+3(3.77e-05)]_\ 28 chrX:13628078-13628198 5.18e-02 66_[+1(9.21e-05)]_[+1(9.21e-05)]_38 chrX:1105651-1105771 2.65e-03 35_[+2(5.74e-05)]_20_[+2(9.51e-05)]_\ 20_[+2(5.74e-05)]_21 chr3L:15540834-15540954 2.18e-03 12_[+1(9.21e-05)]_11_[+1(9.21e-05)]_\ 25_[+5(2.44e-05)]_48 chr2R:17621660-17621780 2.85e-05 35_[+1(9.21e-05)]_45_[+2(9.51e-05)]_\ 24 chr3L:9038331-9038451 2.02e-01 65_[+1(9.21e-05)]_9_[+1(9.21e-05)]_\ 30 chrX:4106386-4106506 1.71e-02 120 chr2R:21885902-21886022 5.72e-05 [+1(9.21e-05)]_64_[+5(9.39e-05)]_40 chr3R:13996194-13996314 2.96e-01 120 chrX:7496732-7496852 9.50e-06 45_[+4(2.84e-05)]_18_[+1(9.21e-05)]_\ 29_[+2(5.74e-05)]_4 chr3R:21586236-21586356 3.09e-01 48_[+1(9.21e-05)]_34_[+1(9.21e-05)]_\ 22 chr2L:9972753-9972873 2.57e-01 96_[+1(9.21e-05)]_16 chr3L:698654-698774 6.72e-05 10_[+5(2.44e-05)]_32_[+2(5.74e-05)]_\ 62 chr2L:15401997-15402117 1.58e-02 82_[+2(9.51e-05)]_13_[+3(3.77e-05)]_\ 9 chr3R:17712485-17712605 4.63e-02 11_[+5(9.39e-05)]_16_[+1(9.21e-05)]_\ 77 chr2R:18573675-18573795 4.03e-04 69_[+2(5.74e-05)]_9_[+3(3.77e-05)]_\ 26 chr3R:11285440-11285560 5.09e-03 26_[+2(9.51e-05)]_86 chr2L:521137-521257 4.60e-02 55_[+1(9.21e-05)]_57 chrX:4940772-4940892 9.29e-03 84_[+1(9.21e-05)]_28 chrX:6868891-6869011 1.98e-03 11_[+5(3.95e-05)]_101 chr3R:16347812-16347932 5.60e-03 62_[+3(7.64e-05)]_50 chr3L:6788094-6788214 2.02e-03 5_[+3(3.77e-05)]_107 chr3L:5980627-5980747 3.22e-03 46_[+2(5.74e-05)]_66 chr2R:14975802-14975922 1.45e-03 78_[+2(5.74e-05)]_20_[+4(5.12e-05)]_\ 6 chr2L:12579279-12579399 9.85e-03 8_[+1(9.21e-05)]_104 chr3R:24614778-24614898 4.04e-03 25_[+3(3.77e-05)]_45_[+3(3.77e-05)]_\ 34 chr3L:6943207-6943327 9.55e-03 120 chr2L:1560261-1560381 1.51e-02 45_[+2(5.74e-05)]_[+3(3.77e-05)]_59 chr2L:4221458-4221578 2.50e-04 12_[+4(2.84e-05)]_43_[+5(2.44e-05)]_\ 49 chr2R:10676279-10676399 6.38e-03 33_[+4(4.25e-05)]_21_[+1(9.21e-05)]_\ 50 chr3L:11400662-11400782 5.68e-02 2_[+1(9.21e-05)]_110 chrX:2964841-2964961 1.76e-02 82_[+1(9.21e-05)]_30 chrX:19827903-19828023 3.41e-04 3_[+4(2.84e-05)]_36_[+5(2.44e-05)]_\ 33_[+1(9.21e-05)]_24 chr2L:5298065-5298185 4.56e-02 98_[+2(5.74e-05)]_14 chr2L:12613158-12613278 1.78e-02 69_[+2(5.74e-05)]_43 chr3R:10534792-10534912 4.89e-02 7_[+1(9.21e-05)]_105 chr3R:24577711-24577831 1.08e-03 35_[+2(5.74e-05)]_1_[+2(5.74e-05)]_\ 68 chr3R:15205521-15205641 5.37e-03 59_[+2(5.74e-05)]_44_[+3(3.77e-05)]_\ 1 chr2R:21507137-21507257 9.71e-03 17_[+4(4.25e-05)]_[+4(4.25e-05)]_5_\ [+1(9.21e-05)]_74 chr2R:11599752-11599872 4.56e-02 120 chr3R:26917756-26917876 9.62e-04 [+1(9.21e-05)]_104_[+4(3.29e-06)] chr3R:8684483-8684603 5.24e-01 120 chr2L:14207165-14207285 4.15e-02 25_[+1(9.21e-05)]_87 chrX:13243892-13244012 4.00e-03 66_[+2(5.74e-05)]_[+2(5.74e-05)]_38 chr3L:10247243-10247363 1.27e-02 37_[+5(2.44e-05)]_75 chr3L:4168549-4168669 4.88e-02 20_[+1(9.21e-05)]_11_[+1(9.21e-05)]_\ 16_[+1(9.21e-05)]_8_[+1(9.21e-05)]_33 chr2L:6076346-6076466 2.71e-02 55_[+2(5.74e-05)]_57 chr3R:6921653-6921773 4.22e-05 [+1(9.21e-05)]_89_[+3(3.77e-05)]_15 chr2R:17341457-17341577 9.81e-04 37_[+2(5.74e-05)]_75 chr3L:10297927-10298047 8.12e-02 41_[+1(9.21e-05)]_71 chr2L:14133681-14133801 4.79e-03 56_[+2(5.74e-05)]_56 chr2R:14117405-14117525 2.25e-01 98_[+1(9.21e-05)]_14 chrX:1984681-1984801 1.69e-01 120 chr2L:11296606-11296726 5.84e-03 16_[+1(9.21e-05)]_96 chr3L:17494083-17494203 3.72e-03 37_[+2(5.74e-05)]_75 chr3R:21853070-21853190 4.48e-03 96_[+1(9.21e-05)]_16 chrX:14209225-14209345 1.59e-02 78_[+1(9.21e-05)]_34 chrX:2467090-2467210 1.02e-02 [+4(2.84e-05)]_8_[+1(9.21e-05)]_\ [+1(9.21e-05)]_88 chrX:17733971-17734091 1.65e-05 7_[+1(9.21e-05)]_12_[+4(7.69e-05)]_\ 85 chr3R:24205600-24205720 3.72e-01 81_[+1(9.21e-05)]_31 chr2L:14356896-14357016 6.03e-03 57_[+2(5.74e-05)]_55 chr3R:26001458-26001578 8.67e-03 4_[+3(3.77e-05)]_44_[+2(5.74e-05)]_\ 56 chrX:19148394-19148514 3.73e-03 5_[+1(9.21e-05)]_107 chrX:12260896-12261016 1.03e-01 82_[+1(9.21e-05)]_30 chr2R:17829947-17830067 7.21e-01 120 chr3R:16545865-16545985 3.11e-03 62_[+3(3.77e-05)]_50 chr3R:27558484-27558604 2.47e-04 25_[+1(9.21e-05)]_13_[+4(2.84e-05)]_\ 66 chr2L:1271489-1271609 1.40e-02 31_[+2(5.74e-05)]_81 chr3R:9603100-9603220 9.94e-02 74_[+1(9.21e-05)]_38 chrX:8857180-8857300 5.58e-04 63_[+1(9.21e-05)]_39_[+4(6.79e-06)]_\ 2 chr2L:7809353-7809473 3.82e-02 17_[+1(9.21e-05)]_95 chr2R:12460135-12460255 4.02e-03 [+1(9.21e-05)]_112 chr3L:10697686-10697806 2.56e-03 69_[+2(5.74e-05)]_43 chr3L:8078138-8078258 1.94e-02 75_[+1(9.21e-05)]_37 chr2R:9558034-9558154 2.08e-03 56_[+2(5.74e-05)]_18_[+2(5.74e-05)]_\ 30 chr3L:14655653-14655773 2.48e-03 39_[+2(5.74e-05)]_[+2(5.74e-05)]_65 chr3L:10765239-10765359 5.99e-01 120 chr2L:16605323-16605443 8.32e-02 102_[+1(9.21e-05)]_10 chr3R:25591038-25591158 8.21e-03 25_[+5(2.44e-05)]_25_[+1(9.21e-05)]_\ 54 chr2R:8183888-8184008 2.66e-04 56_[+2(5.74e-05)]_56 chr3R:24846351-24846471 1.29e-02 1_[+1(9.21e-05)]_[+1(9.21e-05)]_16_\ [+4(4.25e-05)]_79 chr3R:24773583-24773703 1.21e-03 1_[+1(9.21e-05)]_111 chr2R:19372177-19372297 2.11e-04 37_[+4(6.79e-06)]_[+5(5.50e-05)]_10_\ [+1(9.21e-05)]_49 chr2R:11452914-11453034 5.61e-04 83_[+2(5.74e-05)]_29 chr3L:6342593-6342713 2.46e-03 16_[+4(7.69e-05)]_52_[+1(9.21e-05)]_\ 36 chr2L:10749780-10749900 4.36e-04 6_[+4(4.25e-05)]_59_[+1(9.21e-05)]_\ 39 chr3R:12362099-12362219 3.06e-03 69_[+4(3.29e-06)]_[+4(7.69e-05)]_35 chrX:5192689-5192809 4.38e-03 44_[+1(9.21e-05)]_68 chr2L:12686948-12687068 9.27e-02 120 chr3R:8879002-8879122 5.88e-03 26_[+3(3.77e-05)]_14_[+2(5.74e-05)]_\ 64 chr2R:19257653-19257773 7.55e-02 39_[+1(9.21e-05)]_73 chrX:2283628-2283748 3.69e-01 38_[+1(9.21e-05)]_74 chrX:3349768-3349888 4.63e-01 120 chr2R:16211962-16212082 1.06e-03 72_[+1(9.21e-05)]_40 chr3L:8569614-8569734 4.84e-04 49_[+2(5.74e-05)]_32_[+5(5.50e-05)]_\ 23 chr2R:18664284-18664404 1.33e-04 47_[+2(5.74e-05)]_41_[+4(7.69e-05)]_\ 16 chr2L:1658376-1658496 1.21e-02 61_[+2(5.74e-05)]_9_[+3(3.77e-05)]_\ 34 chr3L:19199784-19199904 2.31e-03 40_[+1(9.21e-05)]_72 chr3L:6807133-6807253 3.48e-03 15_[+3(3.77e-05)]_1_[+2(5.74e-05)]_\ 88 chr2R:25239622-25239742 4.80e-02 120 chr2L:3426770-3426890 3.19e-02 71_[+2(5.74e-05)]_24_[+3(7.64e-05)]_\ 9 chr2R:21548083-21548203 7.80e-03 45_[+2(5.74e-05)]_67 chr3L:6449309-6449429 4.16e-03 69_[+4(2.84e-05)]_43 chr3L:10309655-10309775 2.70e-02 62_[+5(9.39e-05)]_41_[+1(9.21e-05)]_\ 1 chrX:10264002-10264122 1.79e-02 25_[+2(5.74e-05)]_87 chrX:10536366-10536486 1.87e-03 33_[+1(9.21e-05)]_39_[+1(9.21e-05)]_\ 32 chrX:3349970-3350090 4.37e-02 120 chrX:17076565-17076685 5.87e-01 120 chr2R:21714049-21714169 3.87e-03 6_[+2(5.74e-05)]_77_[+2(5.74e-05)]_\ 21 chr2L:14121119-14121239 5.66e-01 120 chrX:6004782-6004902 4.55e-05 10_[+2(9.51e-05)]_73_[+1(9.21e-05)]_\ 21 chrX:13207327-13207447 2.02e-01 58_[+1(9.21e-05)]_54 chrX:6991427-6991547 4.14e-04 70_[+2(5.74e-05)]_42 chr3L:6498097-6498217 4.71e-01 120 chr2L:21806509-21806629 8.63e-03 6_[+3(7.64e-05)]_86_[+2(5.74e-05)]_\ 12 chrX:3161988-3162108 6.22e-02 18_[+1(9.21e-05)]_78_[+1(9.21e-05)]_\ 8 chrX:8418557-8418677 2.41e-02 58_[+1(9.21e-05)]_3_[+1(9.21e-05)]_\ 43 chr3R:6934062-6934182 2.13e-02 78_[+5(2.44e-05)]_34 chr2R:12960449-12960569 6.39e-04 73_[+2(5.74e-05)]_39 chr2R:14918702-14918822 4.77e-01 120 chr3L:2584980-2585100 1.81e-02 47_[+1(9.21e-05)]_65 chr3R:5717045-5717165 1.77e-02 75_[+1(9.21e-05)]_37 chr2L:19217118-19217238 1.32e-02 120 chr3R:5322379-5322499 2.92e-02 120 chr2R:19153799-19153919 1.70e-02 59_[+1(9.21e-05)]_22_[+1(9.21e-05)]_\ 23 chr3L:7818596-7818716 2.87e-02 46_[+1(9.21e-05)]_66 chr3L:3079236-3079356 5.43e-02 75_[+1(9.21e-05)]_37 chr2R:9711049-9711169 1.22e-01 120 chrX:14922999-14923119 4.04e-01 16_[+1(9.21e-05)]_16_[+1(9.21e-05)]_\ 72 chr3L:15777185-15777305 1.43e-04 120 chrX:6983126-6983246 1.72e-02 6_[+2(9.51e-05)]_106 chrX:8644171-8644291 1.53e-03 20_[+5(3.95e-05)]_53_[+1(9.21e-05)]_\ 31 chr2L:2872328-2872448 2.24e-04 29_[+3(3.77e-05)]_1_[+2(5.74e-05)]_\ [+3(3.77e-05)]_66 chr3R:13075899-13076019 7.51e-04 108_[+3(3.77e-05)]_4 chrX:3140071-3140191 3.58e-03 6_[+2(5.74e-05)]_106 chr3L:4719946-4720066 2.39e-03 95_[+2(5.74e-05)]_17 chr2R:11398764-11398884 9.71e-02 32_[+1(9.21e-05)]_80 chr3L:16166749-16166869 5.83e-05 17_[+1(9.21e-05)]_16_[+5(7.01e-05)]_\ 61_[+3(7.64e-05)]_2 chr3L:8860860-8860980 1.94e-01 50_[+1(9.21e-05)]_62 chr3L:14153069-14153189 3.40e-01 55_[+1(9.21e-05)]_57 chr3L:8833509-8833629 2.02e-04 51_[+5(2.44e-05)]_46_[+2(5.74e-05)]_\ 7 chr3L:11421000-11421120 4.60e-04 27_[+3(3.77e-05)]_5_[+2(5.74e-05)]_\ [+2(5.74e-05)]_64 chr3L:5655198-5655318 2.53e-02 55_[+2(5.74e-05)]_57 chr3L:14158277-14158397 1.22e-04 1_[+3(3.77e-05)]_87_[+3(3.77e-05)]_\ 16 chr3L:4360445-4360565 4.98e-04 35_[+2(5.74e-05)]_52_[+4(7.69e-05)]_\ 17 chr2L:7293217-7293337 7.94e-04 5_[+4(3.29e-06)]_93_[+1(9.21e-05)]_\ 6 chrX:13397741-13397861 1.18e-02 89_[+1(9.21e-05)]_23 chr2R:19670586-19670706 2.76e-04 19_[+4(7.69e-05)]_30_[+2(5.74e-05)]_\ 55 chrX:13244094-13244214 1.34e-03 20_[+1(9.21e-05)]_6_[+1(9.21e-05)]_\ 5_[+4(2.84e-05)]_65 chr3R:16277652-16277772 2.71e-02 41_[+2(5.74e-05)]_71 chr2L:20858801-20858921 2.80e-02 76_[+2(5.74e-05)]_36 chr3R:8929823-8929943 1.90e-03 [+2(5.74e-05)]_[+2(5.74e-05)]_43_\ [+1(9.21e-05)]_53 chr3L:10771391-10771511 8.69e-06 9_[+1(9.21e-05)]_61_[+3(3.77e-05)]_\ 34 chr3R:17062836-17062956 1.71e-02 72_[+3(3.77e-05)]_10_[+3(3.77e-05)]_\ 22 chr2R:13552352-13552472 4.36e-02 61_[+1(9.21e-05)]_51 chr3R:31321676-31321796 3.99e-02 69_[+1(9.21e-05)]_1_[+1(9.21e-05)]_\ 34 chrX:9666584-9666704 4.11e-02 71_[+5(2.44e-05)]_41 chr2R:8601938-8602058 1.36e-03 27_[+3(3.77e-05)]_25_[+1(9.21e-05)]_\ 52 chr3L:3965358-3965478 8.47e-03 [+4(4.25e-05)]_36_[+1(9.21e-05)]_68 chr2L:12006061-12006181 6.79e-01 120 chr3R:23131058-23131178 9.87e-03 81_[+1(9.21e-05)]_6_[+1(9.21e-05)]_\ 17 chrX:2918669-2918789 1.31e-04 8_[+1(9.21e-05)]_21_[+3(3.77e-05)]_\ 51_[+2(5.74e-05)]_16 chrX:8295961-8296081 1.04e-02 120 chr2R:8635541-8635661 1.04e-02 61_[+2(5.74e-05)]_21_[+3(7.64e-05)]_\ 22 chr3R:22150581-22150701 1.06e-01 120 chrX:17346208-17346328 3.48e-03 41_[+5(2.44e-05)]_71 chr2L:7136718-7136838 2.32e-01 53_[+1(9.21e-05)]_59 chr2R:14128665-14128785 5.68e-01 120 chrX:9122900-9123020 1.71e-03 85_[+1(9.21e-05)]_18_[+1(9.21e-05)]_\ 1 chr3L:10346425-10346545 5.30e-01 120 chr3L:7788172-7788292 6.64e-03 47_[+2(5.74e-05)]_14_[+2(5.74e-05)]_\ 43 chr3L:732694-732814 6.04e-03 24_[+1(9.21e-05)]_[+1(9.21e-05)]_\ [+1(9.21e-05)]_28_[+1(9.21e-05)]_36 chr2L:12674533-12674653 3.79e-03 48_[+2(9.51e-05)]_1_[+2(5.74e-05)]_\ 55 chr3L:21194556-21194676 3.27e-04 72_[+1(9.21e-05)]_20_[+5(3.95e-05)]_\ 12 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n05.farnam.hpc.yale.internal ********************************************************************************