******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/scrt.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2R:10085005-10085125 1.0000 120 chr3R:23664567-23664687 1.0000 120 chr2L:17594226-17594346 1.0000 120 chr2L:12053514-12053634 1.0000 120 chr3R:24264475-24264595 1.0000 120 chr2R:14747053-14747173 1.0000 120 chr2L:10837631-10837751 1.0000 120 chr3L:15541395-15541515 1.0000 120 chrX:3573990-3574110 1.0000 120 chr2R:13296570-13296690 1.0000 120 chr2L:1137147-1137267 1.0000 120 chr2R:10347213-10347333 1.0000 120 chr3L:11937409-11937529 1.0000 120 chr2R:13424156-13424276 1.0000 120 chr2L:2637117-2637237 1.0000 120 chrX:18347780-18347900 1.0000 120 chr3R:14085694-14085814 1.0000 120 chrX:11285132-11285252 1.0000 120 chr2R:11845110-11845230 1.0000 120 chr2L:16389575-16389695 1.0000 120 chrX:1587924-1588044 1.0000 120 chr2R:13526796-13526916 1.0000 120 chr3L:15036808-15036928 1.0000 120 chrX:18349501-18349621 1.0000 120 chrX:10454913-10455033 1.0000 120 chr3R:11670059-11670179 1.0000 120 chr3R:9199869-9199989 1.0000 120 chr2R:13193924-13194044 1.0000 120 chr3L:17822992-17823112 1.0000 120 chr3L:21151626-21151746 1.0000 120 chr2R:12687350-12687470 1.0000 120 chr2R:24243538-24243658 1.0000 120 chrX:3195998-3196118 1.0000 120 chr2R:22264494-22264614 1.0000 120 chr3L:5448006-5448126 1.0000 120 chr2L:15511763-15511883 1.0000 120 chr3L:9643912-9644032 1.0000 120 chr3R:27663013-27663133 1.0000 120 chr3L:2282584-2282704 1.0000 120 chr3L:10299515-10299635 1.0000 120 chr3R:26682140-26682260 1.0000 120 chr2R:15382439-15382559 1.0000 120 chr3L:9917020-9917140 1.0000 120 chr2L:14188294-14188414 1.0000 120 chr3L:21186615-21186735 1.0000 120 chr2L:16555155-16555275 1.0000 120 chr2L:14244380-14244500 1.0000 120 chr3R:5376735-5376855 1.0000 120 chr2L:7400463-7400583 1.0000 120 chrX:1508574-1508694 1.0000 120 chr2L:7587268-7587388 1.0000 120 chr3L:18863429-18863549 1.0000 120 chr3R:5172106-5172226 1.0000 120 chrX:1811298-1811418 1.0000 120 chr2R:14377923-14378043 1.0000 120 chr3L:9456528-9456648 1.0000 120 chr2R:12072796-12072916 1.0000 120 chr2R:13644323-13644443 1.0000 120 chr3R:4319138-4319258 1.0000 120 chr2R:10371611-10371731 1.0000 120 chr2L:17560258-17560378 1.0000 120 chr2L:1693969-1694089 1.0000 120 chr3L:5201513-5201633 1.0000 120 chrX:2581932-2582052 1.0000 120 chr3R:20946939-20947059 1.0000 120 chr2L:6034513-6034633 1.0000 120 chr3R:11695045-11695165 1.0000 120 chr3R:25612097-25612217 1.0000 120 chrX:10684702-10684822 1.0000 120 chr3L:8285405-8285525 1.0000 120 chr2R:16054194-16054314 1.0000 120 chr3R:27888280-27888400 1.0000 120 chrX:12085515-12085635 1.0000 120 chr2L:15011902-15012022 1.0000 120 chr3R:6584636-6584756 1.0000 120 chr3L:18968332-18968452 1.0000 120 chr3L:4016298-4016418 1.0000 120 chr3R:24635113-24635233 1.0000 120 chr2L:9321136-9321256 1.0000 120 chr4:1052799-1052919 1.0000 120 chrX:1476576-1476696 1.0000 120 chr2L:2911064-2911184 1.0000 120 chr2R:21252740-21252860 1.0000 120 chr2L:5650699-5650819 1.0000 120 chr3L:16257368-16257488 1.0000 120 chr2L:2502266-2502386 1.0000 120 chr3L:3492229-3492349 1.0000 120 chr2L:11082163-11082283 1.0000 120 chrX:7156857-7156977 1.0000 120 chr2R:13375000-13375120 1.0000 120 chr2L:6899492-6899612 1.0000 120 chrX:13763975-13764095 1.0000 120 chr2R:18551340-18551460 1.0000 120 chr2R:24407998-24408118 1.0000 120 chr2L:16135535-16135655 1.0000 120 chr2R:19581121-19581241 1.0000 120 chr3R:30559169-30559289 1.0000 120 chrX:4053531-4053651 1.0000 120 chr3R:5799545-5799665 1.0000 120 chrX:11293926-11294046 1.0000 120 chr3R:30560234-30560354 1.0000 120 chr3R:26531642-26531762 1.0000 120 chr3L:17942589-17942709 1.0000 120 chr2R:19032740-19032860 1.0000 120 chr2R:16071122-16071242 1.0000 120 chr3L:15593548-15593668 1.0000 120 chrX:3376515-3376635 1.0000 120 chr3R:19407047-19407167 1.0000 120 chrX:6205089-6205209 1.0000 120 chr3L:14189581-14189701 1.0000 120 chr2L:2920793-2920913 1.0000 120 chr3R:14876059-14876179 1.0000 120 chr2R:17873820-17873940 1.0000 120 chr3L:9905146-9905266 1.0000 120 chr2R:16109229-16109349 1.0000 120 chr2R:10266021-10266141 1.0000 120 chrX:6081461-6081581 1.0000 120 chr2L:20051338-20051458 1.0000 120 chr3R:21043716-21043836 1.0000 120 chr3R:18815154-18815274 1.0000 120 chrX:20448062-20448182 1.0000 120 chr3R:18159560-18159680 1.0000 120 chr3R:20982587-20982707 1.0000 120 chr2R:16973759-16973879 1.0000 120 chr3L:9770202-9770322 1.0000 120 chr2L:11875085-11875205 1.0000 120 chrX:1398130-1398250 1.0000 120 chr3L:16301066-16301186 1.0000 120 chr2L:14116111-14116231 1.0000 120 chr2R:22088012-22088132 1.0000 120 chr2L:13066094-13066214 1.0000 120 chr2R:17890488-17890608 1.0000 120 chr2L:2404510-2404630 1.0000 120 chr3R:17506940-17507060 1.0000 120 chr2L:13459172-13459292 1.0000 120 chr2R:9376663-9376783 1.0000 120 chr2L:1262817-1262937 1.0000 120 chrX:3931070-3931190 1.0000 120 chr3R:22389577-22389697 1.0000 120 chr3R:24406479-24406599 1.0000 120 chr2R:6799886-6800006 1.0000 120 chr3R:20945653-20945773 1.0000 120 chrX:9523175-9523295 1.0000 120 chr3L:11938857-11938977 1.0000 120 chr2L:1043338-1043458 1.0000 120 chrX:7717038-7717158 1.0000 120 chr2R:9386827-9386947 1.0000 120 chr3L:11740216-11740336 1.0000 120 chr3R:21775951-21776071 1.0000 120 chr2L:16543947-16544067 1.0000 120 chr2R:13533020-13533140 1.0000 120 chr2L:5314769-5314889 1.0000 120 chr2L:1134622-1134742 1.0000 120 chr2L:7593871-7593991 1.0000 120 chr2L:7767568-7767688 1.0000 120 chrX:18063530-18063650 1.0000 120 chr3R:13334182-13334302 1.0000 120 chr2L:918846-918966 1.0000 120 chr2L:7460771-7460891 1.0000 120 chr3L:19601851-19601971 1.0000 120 chr2L:14690318-14690438 1.0000 120 chr2R:14559945-14560065 1.0000 120 chrX:17704065-17704185 1.0000 120 chr2R:16917966-16918086 1.0000 120 chr2R:8013305-8013425 1.0000 120 chr3L:2702600-2702720 1.0000 120 chr3L:16555596-16555716 1.0000 120 chr3L:9905921-9906041 1.0000 120 chr3L:2846657-2846777 1.0000 120 chr3R:22080355-22080475 1.0000 120 chr3R:23666801-23666921 1.0000 120 chr3R:26996770-26996890 1.0000 120 chr3R:10751196-10751316 1.0000 120 chr3R:17198101-17198221 1.0000 120 chr3R:25196996-25197116 1.0000 120 chr2R:18830899-18831019 1.0000 120 chr3R:6435268-6435388 1.0000 120 chr3L:5011251-5011371 1.0000 120 chr2R:23943689-23943809 1.0000 120 chr2L:13285925-13286045 1.0000 120 chr3R:20376614-20376734 1.0000 120 chr3L:8646943-8647063 1.0000 120 chr3L:7313698-7313818 1.0000 120 chr3L:10290515-10290635 1.0000 120 chr3R:6940237-6940357 1.0000 120 chr3L:17180592-17180712 1.0000 120 chrX:2636961-2637081 1.0000 120 chrX:9656011-9656131 1.0000 120 chr3L:5907210-5907330 1.0000 120 chr2R:12701982-12702102 1.0000 120 chr3L:2849759-2849879 1.0000 120 chrX:15538148-15538268 1.0000 120 chr3L:20885333-20885453 1.0000 120 chr2L:6055283-6055403 1.0000 120 chr3R:30415029-30415149 1.0000 120 chr3R:18316335-18316455 1.0000 120 chr2R:13106149-13106269 1.0000 120 chr2R:11846706-11846826 1.0000 120 chr2L:16689789-16689909 1.0000 120 chr2L:1836259-1836379 1.0000 120 chr2L:19917147-19917267 1.0000 120 chr2L:17580567-17580687 1.0000 120 chr3L:20410463-20410583 1.0000 120 chr3L:4007288-4007408 1.0000 120 chrX:12835664-12835784 1.0000 120 chr2R:16259939-16260059 1.0000 120 chr3R:26862358-26862478 1.0000 120 chr3L:15034816-15034936 1.0000 120 chrX:9282412-9282532 1.0000 120 chr3R:17862515-17862635 1.0000 120 chr3R:27661562-27661682 1.0000 120 chr3L:20036780-20036900 1.0000 120 chr2L:21331661-21331781 1.0000 120 chr3R:26667995-26668115 1.0000 120 chr2R:6050683-6050803 1.0000 120 chr2L:14103572-14103692 1.0000 120 chr2R:19554208-19554328 1.0000 120 chr3L:7313897-7314017 1.0000 120 chr2L:22153349-22153469 1.0000 120 chr2R:7543436-7543556 1.0000 120 chr2R:9923162-9923282 1.0000 120 chr3R:16606086-16606206 1.0000 120 chr2L:4859121-4859241 1.0000 120 chrX:13012400-13012520 1.0000 120 chr3L:2256875-2256995 1.0000 120 chr3L:21193952-21194072 1.0000 120 chr3L:21330854-21330974 1.0000 120 chr3L:884205-884325 1.0000 120 chr3R:21967984-21968104 1.0000 120 chr3R:26606599-26606719 1.0000 120 chr3L:1629203-1629323 1.0000 120 chr2R:9351825-9351945 1.0000 120 chr2R:24222052-24222172 1.0000 120 chr3R:12021105-12021225 1.0000 120 chr2L:19998797-19998917 1.0000 120 chr3R:31351081-31351201 1.0000 120 chrX:17656625-17656745 1.0000 120 chr2R:10087509-10087629 1.0000 120 chr2R:13536660-13536780 1.0000 120 chr2L:13046003-13046123 1.0000 120 chr3R:25199723-25199843 1.0000 120 chr2R:10682068-10682188 1.0000 120 chr3R:14214906-14215026 1.0000 120 chr3R:22260806-22260926 1.0000 120 chrX:18221000-18221120 1.0000 120 chr3R:7028707-7028827 1.0000 120 chr3R:26122630-26122750 1.0000 120 chrX:1754310-1754430 1.0000 120 chr2L:19985777-19985897 1.0000 120 chr3L:4969439-4969559 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_scrt/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/scrt.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.248 C 0.248 G 0.249 T 0.254 Background letter frequencies (from file dataset with add-one prior applied): A 0.248 C 0.248 G 0.249 T 0.254 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ACYTGTTG MEME-1 width = 8 sites = 167 llr = 1362 E-value = 1.4e-157 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 9211:::: pos.-specific C :76::::: probability G 1:::a::a matrix T ::39:aa: bits 2.0 ** 1.8 **** 1.6 **** 1.4 * ***** Relative 1.2 * ***** Entropy 1.0 * ***** (11.8 bits) 0.8 ** ***** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACCTGTTG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:14214906-14215026 107 1.55e-05 GAGGGAAAGC ACCTGTTG TTCCAA chr3R:16606086-16606206 56 1.55e-05 TATTTAATAA ACCTGTTG GCCCGCAATC chr3L:20036780-20036900 67 1.55e-05 TAGCTAACTA ACCTGTTG CATGTTTCTT chr3R:27661562-27661682 47 1.55e-05 TTGGGGCACC ACCTGTTG TCAAGCGGGT chr2R:16259939-16260059 83 1.55e-05 AAGCTGGCCA ACCTGTTG AATATGTCCT chr2L:17580567-17580687 49 1.55e-05 CCCACTCCAC ACCTGTTG TGCGTGAGTC chr3L:2849759-2849879 54 1.55e-05 GACCAGGACA ACCTGTTG CCATCTAGCT chr3L:5907210-5907330 33 1.55e-05 CAATCCTACC ACCTGTTG CCGTTCTTCG chr3R:6940237-6940357 58 1.55e-05 ATGTTGGTTA ACCTGTTG CGTTGTTGTC chr3L:5011251-5011371 86 1.55e-05 AATGGCGGCG ACCTGTTG TGTTGTTTAA chr3R:17198101-17198221 92 1.55e-05 CCTGGCCTAC ACCTGTTG CCAATTGTTG chr3R:10751196-10751316 96 1.55e-05 CTGGAAACAT ACCTGTTG AGAGAATCTA chr2L:2404510-2404630 82 1.55e-05 CCTCTCGTTG ACCTGTTG ATTTGGCCAG chr3R:21043716-21043836 89 1.55e-05 CAAAACAGTC ACCTGTTG CCACGATAGC chr2L:20051338-20051458 75 1.55e-05 CAAAAAAACA ACCtgttg tgcatgtgtg chrX:6081461-6081581 83 1.55e-05 TAAGGGTTGA ACCTGTTG CCGGTCCCGG chr3L:14189581-14189701 75 1.55e-05 ACGACATCGT ACCTGTTG CACCTGTTCA chrX:11293926-11294046 90 1.55e-05 TTGTGGGCCT ACCTGTTG CTTAGCAACT chr2L:11082163-11082283 95 1.55e-05 CTCGTACGAA ACCTGTTG CATACTTAGC chr3L:16257368-16257488 87 1.55e-05 CGAGGCGAAT ACCTGTTG CTTGCCGTGG chr2R:21252740-21252860 73 1.55e-05 AGGGAGGCTA ACCTGTTG AGTTTATGAT chrX:1476576-1476696 41 1.55e-05 GCGCTGCCCG ACCTGTTG CCATGCGCTG chr3R:6584636-6584756 62 1.55e-05 AAACCTGGCA ACCTGTTG CTACGGAGGA chr3R:27888280-27888400 67 1.55e-05 CAGCCTGGCA ACCTGTTG CCGCTTGTTA chr3R:20946939-20947059 45 1.55e-05 AGGCAAAGAC ACCTGTTG ATTGGGCCTT chr3L:5201513-5201633 69 1.55e-05 ACTGGACACA ACCTGTTG AGCAACAAGg chr2L:1693969-1694089 83 1.55e-05 GTTCGGCGCC ACCTGTTG GCAACCTTTT chr2R:14377923-14378043 38 1.55e-05 AGGATGTTCC ACCTGTTG CCCGGCGGAA chr3R:5172106-5172226 52 1.55e-05 CATTTCCAGA ACCTGTTG ATAACCGGGA chr2L:7400463-7400583 31 1.55e-05 AGATGTGGCA ACCTGTTG ACATCGAAAC chr3R:27663013-27663133 69 1.55e-05 GCACGCAAAC ACCTGTTG CACATATGCT chr3L:9643912-9644032 73 1.55e-05 TGACCTTGTC ACCTGTTG ATTTTATGAA chr2R:13193924-13194044 50 1.55e-05 CGGGGCGGCG ACCTGTTG AGTTGACAAC chr2R:13536660-13536780 81 3.14e-05 TCGGCTCCAC ACTTGTTG CTCGCCAAGT chrX:17656625-17656745 6 3.14e-05 TTCCA ACTTGTTG CACCCGGCAA chr2L:19998797-19998917 57 3.14e-05 AACGTTTTTC ACTTGTTG TTCACATGCC chr3R:21967984-21968104 12 3.14e-05 AAACTAGCGC ACTTGTTG CATAAGTCGC chr3L:884205-884325 81 3.14e-05 TGCTTGTTCA ACTTGTTG CGTTGCTTTG chr3L:21330854-21330974 82 3.14e-05 CTTGAAAAGG ACTTGTTG ATGTCTTATC chr3R:26667995-26668115 69 3.14e-05 ACAGTTGGCA ACTTGTTG CAGGACATGG chr2L:21331661-21331781 23 3.14e-05 TGCTGGGTGG ACTTGTTG CTCGACTCGA chr3L:15034816-15034936 40 3.14e-05 CTTTTTCGCA ACTTGTTG CCTTGTGCGT chr3L:20410463-20410583 71 3.14e-05 GGACACTTTC ACTTGTTG TACACAAACA chr3R:30415029-30415149 70 3.14e-05 GCTGACTTTC ACTTGTTG ACTGCGAATT chr2L:14690318-14690438 48 3.14e-05 AGCCTCATGC ACTTGTTG CTTCATGTTG chr2L:918846-918966 44 3.14e-05 AAAACAACAC ACTTGTTG AGCCCGCATT chr2R:13533020-13533140 57 3.14e-05 CAGCGCTGCC ACTTGTTG TCTGCTGCCT chr2R:9386827-9386947 52 3.14e-05 AACAGCTTCA ACTTGTTG ACGTTGGCTC chrX:3931070-3931190 100 3.14e-05 TGGAAAAGCC ACTTGTTG ACGCCAGCCG chr2L:1262817-1262937 61 3.14e-05 CGATAAACGG ACTTGTTG CCCCAGCCAA chr2L:14116111-14116231 59 3.14e-05 AGACACAACC ACTTGTTG AGTCATCGCG chr2R:10266021-10266141 77 3.14e-05 GCGTTGATTA ACTTGTTG CATTCGCGTC chrX:6205089-6205209 30 3.14e-05 ATGGATTTTC ACTTGTTG CCCAGCCAGA chr3L:15593548-15593668 60 3.14e-05 GTTATTCGCA ACTTGTTG CCTGGCTGAA chr2R:24407998-24408118 81 3.14e-05 CAAAGCAAAC ACTTGTTG AGCAAATGAT chr2L:5650699-5650819 53 3.14e-05 ACGTTTGTCC ACTTGTTG AGCCGCCCTA chr4:1052799-1052919 61 3.14e-05 CTTGGAAATT ACTTGTTG CAAATTATAC chr2L:16555155-16555275 44 3.14e-05 TTGAAGTATA ACTTGTTG CATTTTGTGG chr3L:21186615-21186735 63 3.14e-05 AGCGCCATGC ACTTGTTG AACGTGGCTA chr2L:14188294-14188414 28 3.14e-05 GTGGGGCGCA ACTTGTTG AGTGCGCCCC chr3L:10299515-10299635 59 3.14e-05 TCCTGTGGCA ACTTGTTG CTCGGCTTGT chr2L:15511763-15511883 49 3.14e-05 CTTGCTGCTT ACTTGTTG CTCGCACTCA chr2R:13526796-13526916 84 3.14e-05 TTTTCGCCCA ACTTGTTG ATTTAAATTC chr3R:14085694-14085814 74 3.14e-05 CGATTTAAAC ACTTGTTG CATGGACAAA chr2L:1137147-1137267 56 3.14e-05 GGAGCAAACA ACTTGTTG ATACTTTTGC chr2R:13296570-13296690 94 3.14e-05 CTTTGGAAAC ACTTGTTG ATAGTCAGAC chr2L:12053514-12053634 51 3.14e-05 ACAAGTTTCC ACTTGTTG CTGCCTGCGC chr3R:7028707-7028827 100 4.69e-05 AGTTACAACC AACTGTTG AGCCGGGGAT chr3R:26606599-26606719 86 4.69e-05 GCGGGACGCA AACTGTTG CAGTTGCGAG chrX:12835664-12835784 72 4.69e-05 GACAGCCACC AACTGTTG AATGGTGGCA chr2L:1134622-1134742 51 4.69e-05 ATACGTTAAA AACTGTTG CACTGCGTCG chr2R:6799886-6800006 8 4.69e-05 CACAACA AACTGTTG AGCGTTATTT chr2R:9376663-9376783 17 4.69e-05 CAAAAATTAT AACTGTTG CTGCCACTGC chr3R:20982587-20982707 66 4.69e-05 TGTGGGCCGA AACTGTTG CTCCGGCCGG chr3R:18815154-18815274 81 4.69e-05 AGAGCTCGGC AACTGTTG CTGCTGTAGT chr3R:14876059-14876179 92 4.69e-05 TCTCGTGCGG AACTGTTG CTCCTCAGCT chr3L:17942589-17942709 73 4.69e-05 GATGGCAACC AACTGTTG CCACCGATAA chrX:7156857-7156977 30 4.69e-05 AAGTTGGCCC AACTGTTG CTGCCGCAAC chr3L:8285405-8285525 71 4.69e-05 ACACAAAACA AACTGTTG CTGGTGGCCC chrX:10684702-10684822 65 4.69e-05 AATGAGCGCC AACTGTTG CTGGCCATAT chr3R:4319138-4319258 56 4.69e-05 TCGCAGTAAC AACTGTTG CTTATTTTTT chrX:1811298-1811418 37 4.69e-05 CTAAGCTCTC AACTGTTG CTCGCTCTCT chr3R:11670059-11670179 59 4.69e-05 CAGCACCAGC AACTGTTG CTGTTGCAAC chr2L:2637117-2637237 65 4.69e-05 GCTTGTTTGC AACTGTTG CTTCTGCTGT chr2L:4859121-4859241 93 6.24e-05 GGCATGGAGT GCCTGTTG CATGGCATGG chr2L:22153349-22153469 23 6.24e-05 TCTGGTGACA GCCTGTTG CTGCCATAAG chr2L:16689789-16689909 58 6.24e-05 GTTAATAGTG GCCTGTTG AACAAGAAAA chrX:15538148-15538268 75 6.24e-05 AGTTATTGCC GCCTGTTG CTCATGATGC chr3L:8646943-8647063 58 6.24e-05 TATCCTGGCA GCCTGTTG CTTCTTGCAA chr3L:11740216-11740336 50 6.24e-05 GAGTGATGGC GCCTGTTG AGCTCGCTTG chr2R:16109229-16109349 24 6.24e-05 GTCGATGACC GCCTGTTG CTGGTAGGAG chr2R:19032740-19032860 70 6.24e-05 ACTCTTTGCT GCCTGTTG AGTTTCGACG chrX:4053531-4053651 75 6.24e-05 TGCCGACGTC GCCTGTTG CGCATTGTGC chr3R:30559169-30559289 52 6.24e-05 GCAGCTTGCA GCCTGTTG CGTGGAGCGG chr2R:18551340-18551460 89 6.24e-05 TTGTTTGCCC GCCTGTTG ATGTTTGTGG chr2R:13375000-13375120 42 6.24e-05 AACCCTTTCG GCCTGTTG CTGCCACAGC chr2R:10371611-10371731 79 6.24e-05 TGTTTGAACA GCCTGTTG CTGTTAATAC chr2R:13644323-13644443 70 6.24e-05 ccagccTGTT GCCTGTTG TATGCCATTT chrX:11285132-11285252 83 6.24e-05 GCGCTCAGCC GCCTGTTG AATGTCAAAA chrX:3573990-3574110 59 6.24e-05 TTGCATGCGC GCCTGTTG CGTTCTTTTC chr3L:4969439-4969559 34 9.34e-05 CCCTTTTTGC AATTGTTG CGCCTTTTAT chr3L:10290515-10290635 76 9.34e-05 AACAACAACC ACCAGTTG ATTCACCAAC chr3R:21775951-21776071 92 9.34e-05 GTACTCCGGC AATTGTTG TGCCCGTTGC chr3R:30560234-30560354 110 9.34e-05 GTCGGCCGGA AATTGTTG TTC chr3L:9917020-9917140 78 9.34e-05 CCCCTTTGCA AATTGTTG CGCATACGCC chr3L:2282584-2282704 81 9.34e-05 GCCCAGCTAC ACCAGTTG CTTCTGGTGG chr2R:24243538-24243658 109 9.34e-05 CCCACCGGCC AATTGTTG CGGC chr3L:11937409-11937529 89 9.34e-05 GCGGGGCGCC ACCAGTTG CTCCGGCCAC chr2L:10837631-10837751 89 9.34e-05 AGAGGAAAAC ACCAGTTG CTTTGTTTTG chr2R:24222052-24222172 37 1.09e-04 GGGGCATGCA ACATGTTG GGCGAGTAAT chr2R:9351825-9351945 40 1.09e-04 TCGGGAAGCA ACATGTTG GAGCCGCAGC chr3L:7313897-7314017 62 1.09e-04 GCGCTCTTCA ACATGTTG CTCTTGTTCG chr3R:26996770-26996890 16 1.09e-04 GGCCGGAGCA ACATGTTG CTGAGACTTC chr2R:16973759-16973879 75 1.09e-04 GTTGCCAGCA ACATGTTG CCAACGCGCT chr3R:24635113-24635233 23 1.25e-04 GGCAGCGCAT GCTTGTTG TGTCACATCA chr3L:21151626-21151746 28 1.25e-04 GCTTTTGTTG GCTTGTTG AATTTATGGC chr2L:1836259-1836379 51 1.56e-04 TCAAGTCATC AGCTGTTG CCCAGCTGTT chrX:2636961-2637081 63 1.56e-04 AGGCAGCAGC ACTAGTTG CGTCGCGTCT chr3L:17180592-17180712 54 1.56e-04 AGCTAGAGCA ACTAGTTG CTCCTTGTAA chr2L:2920793-2920913 48 1.56e-04 GGAATGGGGC AGCTGTTG CTCACttgtt chr2L:9321136-9321256 36 1.56e-04 ATCAGCAGAC AGCTGTTG CTGGCACCCA chr2L:15011902-15012022 61 1.56e-04 GAGAGCGCAC AGCTGTTG CTTTCACAGC chr2L:7587268-7587388 63 1.56e-04 AGCAAGCGCA ACTAGTTG CGGTTTTTCC chrX:10454913-10455033 70 1.56e-04 GGTTTGGGCC AGCTGTTG CCAACAGGCG chr2L:17594226-17594346 61 1.56e-04 AAAATTGGCC AGCTGTTG CTCTTTGGGA chrX:17704065-17704185 34 1.72e-04 CTGAAAACCA ATCTGTTG CGCCTTACTC chr3R:11695045-11695165 96 1.72e-04 GTCTCCTCCA ATCTGTTG CATGCATTTG chrX:1754310-1754430 94 1.87e-04 AGCAGCAGCC ACGTGTTG CTGCCGCGCC chr2R:16917966-16918086 71 1.87e-04 ACGAGCTGCC ACGTGTTG AATCCTTTAC chr2L:5314769-5314889 35 1.87e-04 CCGCTCTGTT ACGTGTTG CTTGTGGCTC chr3R:17506940-17507060 45 1.87e-04 ATTGGCAAGC ACGTGTTG CTTCCCTGCG chrX:1508574-1508694 58 1.87e-04 GACAAAAACC ACGTGTTG ATTTGTTTTG chr2R:19554208-19554328 81 2.03e-04 CAAACAGGCA GACTGTTG CTGCCTGTGC chr3L:3492229-3492349 35 2.03e-04 TTAAGTGGCA GACTGTTG CTCGTGCGCC chr3R:22260806-22260926 47 2.49e-04 ACCCAACCTC AACAGTTG GTCGCTGGCC chr3L:1629203-1629323 10 2.49e-04 GCAACTGGC AACAGTTG GCCGTTTCCC chr2R:13106149-13106269 31 2.49e-04 AAAACGAAGC AACAGTTG CAGGCTTCCC chr2R:23943689-23943809 79 2.49e-04 CCCCTTCTTC ACCTGTTA CACTACGCCG chr2L:7767568-7767688 80 2.49e-04 TAGTAGGTGC AACAGTTG ACAGTATTCC chr3R:24406479-24406599 47 2.49e-04 AATATAGCGC AACAGTTG TGTTTTTCTC chr3R:19407047-19407167 55 2.49e-04 CAGCCTTGCC ACCTGTTA TGTCTCGAGC chr2L:2502266-2502386 67 2.49e-04 TGGGCTGGCA ACCTGTTA CATGATGCCC chr2R:16054194-16054314 48 2.49e-04 AGACACATGC AACAGTTG TCCTATTTGC chr3R:25612097-25612217 67 2.49e-04 TTGGCGAGCA ACCTGTTA GCTCGGCAAT chr2L:6034513-6034633 81 2.49e-04 AGGAGCGTGC AACAGTTG GTCACCTGTT chrX:2581932-2582052 26 2.49e-04 CGGCGGAATC AACAGTTG GTGCGTATAC chr3R:26682140-26682260 47 2.49e-04 TTATCCGGCC AGTTGTTG CGCCACGGCA chr2L:19917147-19917267 68 2.66e-04 GCTAAAAGAC ATTTGTTG CTTTGGCAGC chr2R:8013305-8013425 57 2.66e-04 GTTTGTTTGT ATTTGTTG CTTCGCCTCT chr3R:20945653-20945773 73 2.66e-04 CGGAGCAACA ATTTGTTG ACGAGCCGGG chrX:1398130-1398250 74 2.66e-04 GCAACAGGCG ATTtgttg gtggtggtgg chr3L:21193952-21194072 79 2.96e-04 CGTCCCGCGA ACCTGTGG CATTTGGCCA chr2L:6055283-6055403 62 2.96e-04 ACATTAAGTC ACCTGTGG CGGACACTTT chr3R:6435268-6435388 47 2.96e-04 GAAATGGGCG ACCTGTGG GGCGATATAT chr3L:4007288-4007408 84 3.59e-04 CAAATGTCCC ACTTGTTA CCAGAAAAGC chr2R:11846706-11846826 43 3.89e-04 GGGTGGCTCA ACAAGTTG TGCGTCAAGT chr3L:16555596-16555716 82 3.89e-04 TGGCTAAGCA ACAAGTTG GTCTTCTTTT chr2R:17873820-17873940 92 3.89e-04 AGCAGCAGCC ACAAGTTG CCTTTTCGAC chr3L:15036808-15036928 61 3.89e-04 TGTTTCAGCA ACAAGTTG CTTACATTTC chrX:1587924-1588044 60 3.89e-04 GAGGTATGCA ACAAGTTG CCCAGCTCAG chr3L:7313698-7313818 24 4.21e-04 ATGAATTCCC TCCTGTTG CATATGTTTT chr3L:9456528-9456648 53 4.21e-04 GGTCCTGCAA TCCTGTTG GCCCATCGAA chrX:7717038-7717158 61 4.36e-04 ATAATGTGCC ACTTGTGG CTTTCTGTCC chr3R:25196996-25197116 67 5.14e-04 CCCGCAATTA GTCTGTTG CTGTTGCTGC chr2R:16071122-16071242 5 5.14e-04 ACCC AACTGTTA TTGCCGCCGC chr3R:5799545-5799665 48 6.70e-04 CCCGACGGCC GGTTGTTG CGCCAGTACC chr3R:18316335-18316455 88 7.33e-04 GTAATCAACA GTTTGTTG GCACGCGTTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:14214906-14215026 1.5e-05 106_[+1]_6 chr3R:16606086-16606206 1.5e-05 55_[+1]_57 chr3L:20036780-20036900 1.5e-05 66_[+1]_46 chr3R:27661562-27661682 1.5e-05 46_[+1]_66 chr2R:16259939-16260059 1.5e-05 82_[+1]_30 chr2L:17580567-17580687 1.5e-05 48_[+1]_64 chr3L:2849759-2849879 1.5e-05 53_[+1]_59 chr3L:5907210-5907330 1.5e-05 32_[+1]_80 chr3R:6940237-6940357 1.5e-05 57_[+1]_55 chr3L:5011251-5011371 1.5e-05 85_[+1]_27 chr3R:17198101-17198221 1.5e-05 91_[+1]_21 chr3R:10751196-10751316 1.5e-05 95_[+1]_17 chr2L:2404510-2404630 1.5e-05 81_[+1]_31 chr3R:21043716-21043836 1.5e-05 88_[+1]_24 chr2L:20051338-20051458 1.5e-05 74_[+1]_38 chrX:6081461-6081581 1.5e-05 82_[+1]_30 chr3L:14189581-14189701 1.5e-05 74_[+1]_38 chrX:11293926-11294046 1.5e-05 89_[+1]_23 chr2L:11082163-11082283 1.5e-05 94_[+1]_18 chr3L:16257368-16257488 1.5e-05 86_[+1]_26 chr2R:21252740-21252860 1.5e-05 72_[+1]_40 chrX:1476576-1476696 1.5e-05 40_[+1]_72 chr3R:6584636-6584756 1.5e-05 61_[+1]_51 chr3R:27888280-27888400 1.5e-05 66_[+1]_46 chr3R:20946939-20947059 1.5e-05 44_[+1]_68 chr3L:5201513-5201633 1.5e-05 68_[+1]_44 chr2L:1693969-1694089 1.5e-05 82_[+1]_30 chr2R:14377923-14378043 1.5e-05 37_[+1]_75 chr3R:5172106-5172226 1.5e-05 51_[+1]_61 chr2L:7400463-7400583 1.5e-05 30_[+1]_82 chr3R:27663013-27663133 1.5e-05 68_[+1]_44 chr3L:9643912-9644032 1.5e-05 72_[+1]_40 chr2R:13193924-13194044 1.5e-05 49_[+1]_63 chr2R:13536660-13536780 3.1e-05 80_[+1]_32 chrX:17656625-17656745 3.1e-05 5_[+1]_107 chr2L:19998797-19998917 3.1e-05 56_[+1]_56 chr3R:21967984-21968104 3.1e-05 11_[+1]_101 chr3L:884205-884325 3.1e-05 80_[+1]_32 chr3L:21330854-21330974 3.1e-05 81_[+1]_31 chr3R:26667995-26668115 3.1e-05 68_[+1]_44 chr2L:21331661-21331781 3.1e-05 22_[+1]_90 chr3L:15034816-15034936 3.1e-05 39_[+1]_73 chr3L:20410463-20410583 3.1e-05 70_[+1]_42 chr3R:30415029-30415149 3.1e-05 69_[+1]_43 chr2L:14690318-14690438 3.1e-05 47_[+1]_65 chr2L:918846-918966 3.1e-05 43_[+1]_69 chr2R:13533020-13533140 3.1e-05 56_[+1]_56 chr2R:9386827-9386947 3.1e-05 51_[+1]_61 chrX:3931070-3931190 3.1e-05 99_[+1]_13 chr2L:1262817-1262937 3.1e-05 60_[+1]_52 chr2L:14116111-14116231 3.1e-05 58_[+1]_54 chr2R:10266021-10266141 3.1e-05 76_[+1]_36 chrX:6205089-6205209 3.1e-05 29_[+1]_83 chr3L:15593548-15593668 3.1e-05 59_[+1]_53 chr2R:24407998-24408118 3.1e-05 80_[+1]_32 chr2L:5650699-5650819 3.1e-05 52_[+1]_60 chr4:1052799-1052919 3.1e-05 60_[+1]_52 chr2L:16555155-16555275 3.1e-05 43_[+1]_69 chr3L:21186615-21186735 3.1e-05 62_[+1]_50 chr2L:14188294-14188414 3.1e-05 27_[+1]_85 chr3L:10299515-10299635 3.1e-05 58_[+1]_54 chr2L:15511763-15511883 3.1e-05 48_[+1]_64 chr2R:13526796-13526916 3.1e-05 83_[+1]_29 chr3R:14085694-14085814 3.1e-05 73_[+1]_39 chr2L:1137147-1137267 3.1e-05 55_[+1]_57 chr2R:13296570-13296690 3.1e-05 93_[+1]_19 chr2L:12053514-12053634 3.1e-05 50_[+1]_62 chr3R:7028707-7028827 4.7e-05 99_[+1]_13 chr3R:26606599-26606719 4.7e-05 85_[+1]_27 chrX:12835664-12835784 4.7e-05 71_[+1]_41 chr2L:1134622-1134742 4.7e-05 50_[+1]_62 chr2R:6799886-6800006 4.7e-05 7_[+1]_105 chr2R:9376663-9376783 4.7e-05 16_[+1]_96 chr3R:20982587-20982707 4.7e-05 65_[+1]_47 chr3R:18815154-18815274 4.7e-05 80_[+1]_32 chr3R:14876059-14876179 4.7e-05 91_[+1]_21 chr3L:17942589-17942709 4.7e-05 72_[+1]_40 chrX:7156857-7156977 4.7e-05 29_[+1]_83 chr3L:8285405-8285525 4.7e-05 70_[+1]_42 chrX:10684702-10684822 4.7e-05 64_[+1]_48 chr3R:4319138-4319258 4.7e-05 55_[+1]_57 chrX:1811298-1811418 4.7e-05 36_[+1]_76 chr3R:11670059-11670179 4.7e-05 58_[+1]_54 chr2L:2637117-2637237 4.7e-05 64_[+1]_48 chr2L:4859121-4859241 6.2e-05 92_[+1]_20 chr2L:22153349-22153469 6.2e-05 22_[+1]_90 chr2L:16689789-16689909 6.2e-05 57_[+1]_55 chrX:15538148-15538268 6.2e-05 74_[+1]_38 chr3L:8646943-8647063 6.2e-05 57_[+1]_55 chr3L:11740216-11740336 6.2e-05 49_[+1]_63 chr2R:16109229-16109349 6.2e-05 23_[+1]_89 chr2R:19032740-19032860 6.2e-05 69_[+1]_43 chrX:4053531-4053651 6.2e-05 74_[+1]_38 chr3R:30559169-30559289 6.2e-05 51_[+1]_61 chr2R:18551340-18551460 6.2e-05 88_[+1]_24 chr2R:13375000-13375120 6.2e-05 41_[+1]_71 chr2R:10371611-10371731 6.2e-05 78_[+1]_34 chr2R:13644323-13644443 6.2e-05 69_[+1]_43 chrX:11285132-11285252 6.2e-05 82_[+1]_30 chrX:3573990-3574110 6.2e-05 58_[+1]_54 chr3L:4969439-4969559 9.3e-05 33_[+1]_79 chr3L:10290515-10290635 9.3e-05 75_[+1]_37 chr3R:21775951-21776071 9.3e-05 91_[+1]_21 chr3R:30560234-30560354 9.3e-05 109_[+1]_3 chr3L:9917020-9917140 9.3e-05 77_[+1]_35 chr3L:2282584-2282704 9.3e-05 80_[+1]_32 chr2R:24243538-24243658 9.3e-05 108_[+1]_4 chr3L:11937409-11937529 9.3e-05 88_[+1]_24 chr2L:10837631-10837751 9.3e-05 88_[+1]_24 chr2R:24222052-24222172 0.00011 36_[+1]_76 chr2R:9351825-9351945 0.00011 39_[+1]_73 chr3L:7313897-7314017 0.00011 61_[+1]_51 chr3R:26996770-26996890 0.00011 15_[+1]_97 chr2R:16973759-16973879 0.00011 74_[+1]_38 chr3R:24635113-24635233 0.00012 22_[+1]_90 chr3L:21151626-21151746 0.00012 27_[+1]_85 chr2L:1836259-1836379 0.00016 50_[+1]_62 chrX:2636961-2637081 0.00016 62_[+1]_50 chr3L:17180592-17180712 0.00016 53_[+1]_59 chr2L:2920793-2920913 0.00016 47_[+1]_65 chr2L:9321136-9321256 0.00016 35_[+1]_77 chr2L:15011902-15012022 0.00016 60_[+1]_52 chr2L:7587268-7587388 0.00016 62_[+1]_50 chrX:10454913-10455033 0.00016 69_[+1]_43 chr2L:17594226-17594346 0.00016 60_[+1]_52 chrX:17704065-17704185 0.00017 33_[+1]_79 chr3R:11695045-11695165 0.00017 95_[+1]_17 chrX:1754310-1754430 0.00019 93_[+1]_19 chr2R:16917966-16918086 0.00019 70_[+1]_42 chr2L:5314769-5314889 0.00019 34_[+1]_78 chr3R:17506940-17507060 0.00019 44_[+1]_68 chrX:1508574-1508694 0.00019 57_[+1]_55 chr2R:19554208-19554328 0.0002 80_[+1]_32 chr3L:3492229-3492349 0.0002 34_[+1]_78 chr3R:22260806-22260926 0.00025 46_[+1]_66 chr3L:1629203-1629323 0.00025 9_[+1]_103 chr2R:13106149-13106269 0.00025 30_[+1]_82 chr2R:23943689-23943809 0.00025 78_[+1]_34 chr2L:7767568-7767688 0.00025 79_[+1]_33 chr3R:24406479-24406599 0.00025 46_[+1]_66 chr3R:19407047-19407167 0.00025 54_[+1]_58 chr2L:2502266-2502386 0.00025 66_[+1]_46 chr2R:16054194-16054314 0.00025 47_[+1]_65 chr3R:25612097-25612217 0.00025 66_[+1]_46 chr2L:6034513-6034633 0.00025 80_[+1]_32 chrX:2581932-2582052 0.00025 25_[+1]_87 chr3R:26682140-26682260 0.00025 46_[+1]_66 chr2L:19917147-19917267 0.00027 67_[+1]_45 chr2R:8013305-8013425 0.00027 56_[+1]_56 chr3R:20945653-20945773 0.00027 72_[+1]_40 chrX:1398130-1398250 0.00027 73_[+1]_39 chr3L:21193952-21194072 0.0003 78_[+1]_34 chr2L:6055283-6055403 0.0003 61_[+1]_51 chr3R:6435268-6435388 0.0003 46_[+1]_66 chr3L:4007288-4007408 0.00036 83_[+1]_29 chr2R:11846706-11846826 0.00039 42_[+1]_70 chr3L:16555596-16555716 0.00039 81_[+1]_31 chr2R:17873820-17873940 0.00039 91_[+1]_21 chr3L:15036808-15036928 0.00039 60_[+1]_52 chrX:1587924-1588044 0.00039 59_[+1]_53 chr3L:7313698-7313818 0.00042 23_[+1]_89 chr3L:9456528-9456648 0.00042 52_[+1]_60 chrX:7717038-7717158 0.00044 60_[+1]_52 chr3R:25196996-25197116 0.00051 66_[+1]_46 chr2R:16071122-16071242 0.00051 4_[+1]_108 chr3R:5799545-5799665 0.00067 47_[+1]_65 chr3R:18316335-18316455 0.00073 87_[+1]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACYTGTTG width=8 seqs=167 chr3R:14214906-14215026 ( 107) ACCTGTTG 1 chr3R:16606086-16606206 ( 56) ACCTGTTG 1 chr3L:20036780-20036900 ( 67) ACCTGTTG 1 chr3R:27661562-27661682 ( 47) ACCTGTTG 1 chr2R:16259939-16260059 ( 83) ACCTGTTG 1 chr2L:17580567-17580687 ( 49) ACCTGTTG 1 chr3L:2849759-2849879 ( 54) ACCTGTTG 1 chr3L:5907210-5907330 ( 33) ACCTGTTG 1 chr3R:6940237-6940357 ( 58) ACCTGTTG 1 chr3L:5011251-5011371 ( 86) ACCTGTTG 1 chr3R:17198101-17198221 ( 92) ACCTGTTG 1 chr3R:10751196-10751316 ( 96) ACCTGTTG 1 chr2L:2404510-2404630 ( 82) ACCTGTTG 1 chr3R:21043716-21043836 ( 89) ACCTGTTG 1 chr2L:20051338-20051458 ( 75) ACCTGTTG 1 chrX:6081461-6081581 ( 83) ACCTGTTG 1 chr3L:14189581-14189701 ( 75) ACCTGTTG 1 chrX:11293926-11294046 ( 90) ACCTGTTG 1 chr2L:11082163-11082283 ( 95) ACCTGTTG 1 chr3L:16257368-16257488 ( 87) ACCTGTTG 1 chr2R:21252740-21252860 ( 73) ACCTGTTG 1 chrX:1476576-1476696 ( 41) ACCTGTTG 1 chr3R:6584636-6584756 ( 62) ACCTGTTG 1 chr3R:27888280-27888400 ( 67) ACCTGTTG 1 chr3R:20946939-20947059 ( 45) ACCTGTTG 1 chr3L:5201513-5201633 ( 69) ACCTGTTG 1 chr2L:1693969-1694089 ( 83) ACCTGTTG 1 chr2R:14377923-14378043 ( 38) ACCTGTTG 1 chr3R:5172106-5172226 ( 52) ACCTGTTG 1 chr2L:7400463-7400583 ( 31) ACCTGTTG 1 chr3R:27663013-27663133 ( 69) ACCTGTTG 1 chr3L:9643912-9644032 ( 73) ACCTGTTG 1 chr2R:13193924-13194044 ( 50) ACCTGTTG 1 chr2R:13536660-13536780 ( 81) ACTTGTTG 1 chrX:17656625-17656745 ( 6) ACTTGTTG 1 chr2L:19998797-19998917 ( 57) ACTTGTTG 1 chr3R:21967984-21968104 ( 12) ACTTGTTG 1 chr3L:884205-884325 ( 81) ACTTGTTG 1 chr3L:21330854-21330974 ( 82) ACTTGTTG 1 chr3R:26667995-26668115 ( 69) ACTTGTTG 1 chr2L:21331661-21331781 ( 23) ACTTGTTG 1 chr3L:15034816-15034936 ( 40) ACTTGTTG 1 chr3L:20410463-20410583 ( 71) ACTTGTTG 1 chr3R:30415029-30415149 ( 70) ACTTGTTG 1 chr2L:14690318-14690438 ( 48) ACTTGTTG 1 chr2L:918846-918966 ( 44) ACTTGTTG 1 chr2R:13533020-13533140 ( 57) ACTTGTTG 1 chr2R:9386827-9386947 ( 52) ACTTGTTG 1 chrX:3931070-3931190 ( 100) ACTTGTTG 1 chr2L:1262817-1262937 ( 61) ACTTGTTG 1 chr2L:14116111-14116231 ( 59) ACTTGTTG 1 chr2R:10266021-10266141 ( 77) ACTTGTTG 1 chrX:6205089-6205209 ( 30) ACTTGTTG 1 chr3L:15593548-15593668 ( 60) ACTTGTTG 1 chr2R:24407998-24408118 ( 81) ACTTGTTG 1 chr2L:5650699-5650819 ( 53) ACTTGTTG 1 chr4:1052799-1052919 ( 61) ACTTGTTG 1 chr2L:16555155-16555275 ( 44) ACTTGTTG 1 chr3L:21186615-21186735 ( 63) ACTTGTTG 1 chr2L:14188294-14188414 ( 28) ACTTGTTG 1 chr3L:10299515-10299635 ( 59) ACTTGTTG 1 chr2L:15511763-15511883 ( 49) ACTTGTTG 1 chr2R:13526796-13526916 ( 84) ACTTGTTG 1 chr3R:14085694-14085814 ( 74) ACTTGTTG 1 chr2L:1137147-1137267 ( 56) ACTTGTTG 1 chr2R:13296570-13296690 ( 94) ACTTGTTG 1 chr2L:12053514-12053634 ( 51) ACTTGTTG 1 chr3R:7028707-7028827 ( 100) AACTGTTG 1 chr3R:26606599-26606719 ( 86) AACTGTTG 1 chrX:12835664-12835784 ( 72) AACTGTTG 1 chr2L:1134622-1134742 ( 51) AACTGTTG 1 chr2R:6799886-6800006 ( 8) AACTGTTG 1 chr2R:9376663-9376783 ( 17) AACTGTTG 1 chr3R:20982587-20982707 ( 66) AACTGTTG 1 chr3R:18815154-18815274 ( 81) AACTGTTG 1 chr3R:14876059-14876179 ( 92) AACTGTTG 1 chr3L:17942589-17942709 ( 73) AACTGTTG 1 chrX:7156857-7156977 ( 30) AACTGTTG 1 chr3L:8285405-8285525 ( 71) AACTGTTG 1 chrX:10684702-10684822 ( 65) AACTGTTG 1 chr3R:4319138-4319258 ( 56) AACTGTTG 1 chrX:1811298-1811418 ( 37) AACTGTTG 1 chr3R:11670059-11670179 ( 59) AACTGTTG 1 chr2L:2637117-2637237 ( 65) AACTGTTG 1 chr2L:4859121-4859241 ( 93) GCCTGTTG 1 chr2L:22153349-22153469 ( 23) GCCTGTTG 1 chr2L:16689789-16689909 ( 58) GCCTGTTG 1 chrX:15538148-15538268 ( 75) GCCTGTTG 1 chr3L:8646943-8647063 ( 58) GCCTGTTG 1 chr3L:11740216-11740336 ( 50) GCCTGTTG 1 chr2R:16109229-16109349 ( 24) GCCTGTTG 1 chr2R:19032740-19032860 ( 70) GCCTGTTG 1 chrX:4053531-4053651 ( 75) GCCTGTTG 1 chr3R:30559169-30559289 ( 52) GCCTGTTG 1 chr2R:18551340-18551460 ( 89) GCCTGTTG 1 chr2R:13375000-13375120 ( 42) GCCTGTTG 1 chr2R:10371611-10371731 ( 79) GCCTGTTG 1 chr2R:13644323-13644443 ( 70) GCCTGTTG 1 chrX:11285132-11285252 ( 83) GCCTGTTG 1 chrX:3573990-3574110 ( 59) GCCTGTTG 1 chr3L:4969439-4969559 ( 34) AATTGTTG 1 chr3L:10290515-10290635 ( 76) ACCAGTTG 1 chr3R:21775951-21776071 ( 92) AATTGTTG 1 chr3R:30560234-30560354 ( 110) AATTGTTG 1 chr3L:9917020-9917140 ( 78) AATTGTTG 1 chr3L:2282584-2282704 ( 81) ACCAGTTG 1 chr2R:24243538-24243658 ( 109) AATTGTTG 1 chr3L:11937409-11937529 ( 89) ACCAGTTG 1 chr2L:10837631-10837751 ( 89) ACCAGTTG 1 chr2R:24222052-24222172 ( 37) ACATGTTG 1 chr2R:9351825-9351945 ( 40) ACATGTTG 1 chr3L:7313897-7314017 ( 62) ACATGTTG 1 chr3R:26996770-26996890 ( 16) ACATGTTG 1 chr2R:16973759-16973879 ( 75) ACATGTTG 1 chr3R:24635113-24635233 ( 23) GCTTGTTG 1 chr3L:21151626-21151746 ( 28) GCTTGTTG 1 chr2L:1836259-1836379 ( 51) AGCTGTTG 1 chrX:2636961-2637081 ( 63) ACTAGTTG 1 chr3L:17180592-17180712 ( 54) ACTAGTTG 1 chr2L:2920793-2920913 ( 48) AGCTGTTG 1 chr2L:9321136-9321256 ( 36) AGCTGTTG 1 chr2L:15011902-15012022 ( 61) AGCTGTTG 1 chr2L:7587268-7587388 ( 63) ACTAGTTG 1 chrX:10454913-10455033 ( 70) AGCTGTTG 1 chr2L:17594226-17594346 ( 61) AGCTGTTG 1 chrX:17704065-17704185 ( 34) ATCTGTTG 1 chr3R:11695045-11695165 ( 96) ATCTGTTG 1 chrX:1754310-1754430 ( 94) ACGTGTTG 1 chr2R:16917966-16918086 ( 71) ACGTGTTG 1 chr2L:5314769-5314889 ( 35) ACGTGTTG 1 chr3R:17506940-17507060 ( 45) ACGTGTTG 1 chrX:1508574-1508694 ( 58) ACGTGTTG 1 chr2R:19554208-19554328 ( 81) GACTGTTG 1 chr3L:3492229-3492349 ( 35) GACTGTTG 1 chr3R:22260806-22260926 ( 47) AACAGTTG 1 chr3L:1629203-1629323 ( 10) AACAGTTG 1 chr2R:13106149-13106269 ( 31) AACAGTTG 1 chr2R:23943689-23943809 ( 79) ACCTGTTA 1 chr2L:7767568-7767688 ( 80) AACAGTTG 1 chr3R:24406479-24406599 ( 47) AACAGTTG 1 chr3R:19407047-19407167 ( 55) ACCTGTTA 1 chr2L:2502266-2502386 ( 67) ACCTGTTA 1 chr2R:16054194-16054314 ( 48) AACAGTTG 1 chr3R:25612097-25612217 ( 67) ACCTGTTA 1 chr2L:6034513-6034633 ( 81) AACAGTTG 1 chrX:2581932-2582052 ( 26) AACAGTTG 1 chr3R:26682140-26682260 ( 47) AGTTGTTG 1 chr2L:19917147-19917267 ( 68) ATTTGTTG 1 chr2R:8013305-8013425 ( 57) ATTTGTTG 1 chr3R:20945653-20945773 ( 73) ATTTGTTG 1 chrX:1398130-1398250 ( 74) ATTTGTTG 1 chr3L:21193952-21194072 ( 79) ACCTGTGG 1 chr2L:6055283-6055403 ( 62) ACCTGTGG 1 chr3R:6435268-6435388 ( 47) ACCTGTGG 1 chr3L:4007288-4007408 ( 84) ACTTGTTA 1 chr2R:11846706-11846826 ( 43) ACAAGTTG 1 chr3L:16555596-16555716 ( 82) ACAAGTTG 1 chr2R:17873820-17873940 ( 92) ACAAGTTG 1 chr3L:15036808-15036928 ( 61) ACAAGTTG 1 chrX:1587924-1588044 ( 60) ACAAGTTG 1 chr3L:7313698-7313818 ( 24) TCCTGTTG 1 chr3L:9456528-9456648 ( 53) TCCTGTTG 1 chrX:7717038-7717158 ( 61) ACTTGTGG 1 chr3R:25196996-25197116 ( 67) GTCTGTTG 1 chr2R:16071122-16071242 ( 5) AACTGTTA 1 chr3R:5799545-5799665 ( 48) GGTTGTTG 1 chr3R:18316335-18316455 ( 88) GTTTGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.37905 E= 1.4e-157 177 -1403 -85 -441 -33 151 -238 -241 -205 126 -306 32 -105 -1403 -1403 179 -1403 -1403 201 -1403 -1403 -1403 -1403 197 -1403 -1403 -338 194 -279 -1403 195 -1403 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 167 E= 1.4e-157 0.850299 0.000000 0.137725 0.011976 0.197605 0.706587 0.047904 0.047904 0.059880 0.592814 0.029940 0.317365 0.119760 0.000000 0.000000 0.880240 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.023952 0.976048 0.035928 0.000000 0.964072 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACYTGTTG MEME-1 regular expression -------------------------------------------------------------------------------- AC[CT]TGTTG -------------------------------------------------------------------------------- Time 7.24 secs. ******************************************************************************** ******************************************************************************** MOTIF CAACARGT MEME-2 width = 8 sites = 113 llr = 954 E-value = 1.1e-087 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :aa:a4:: pos.-specific C a::a::12 probability G :::::67: matrix T ::::::27 bits 2.0 * ** 1.8 ***** 1.6 ***** 1.4 ***** Relative 1.2 ***** Entropy 1.0 ****** (12.2 bits) 0.8 ****** * 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAACAGGT consensus AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:18221000-18221120 44 1.48e-05 TGGGCTGCGG CAACAGGT GTGTTTTATT chrX:9282412-9282532 15 1.48e-05 TTCACACACT CAACAGGT CCCCATAATA chr2L:13285925-13286045 42 1.48e-05 GACGTTCCAT CAACAGGT GGTTAGCTCT chr2R:18830899-18831019 55 1.48e-05 TTTCGTCGGG CAACAGGT GCTCGCTGCT chr3R:23666801-23666921 40 1.48e-05 AATATGACAT CAACAGGT GGGCAAAGAC chr2R:14559945-14560065 59 1.48e-05 CAAATGCTGG CAACAGGT GGGACATTGG chr2L:7593871-7593991 47 1.48e-05 ATCGTTGGAC CAACAGGT GGATGGGCGA chr3R:21775951-21776071 60 1.48e-05 AAACATCCTG CAACAGGT GGTCCCATCA chrX:9523175-9523295 7 1.48e-05 GCCCAT CAACAGGT AGAAGTTGTC chr3L:16301066-16301186 87 1.48e-05 GTGGGTGCTG CAACAGGT ATCCACAAGT chr2L:11875085-11875205 54 1.48e-05 GGGGCGCCTT CAACAGGT TGCCACCCAC chr3L:9770202-9770322 69 1.48e-05 TTCGCAGCCG CAACAGGT TCACACGGCA chr3R:24635113-24635233 72 1.48e-05 ACCCGAAAGG CAACAGGT TGCAGAAAAA chrX:1811298-1811418 57 1.48e-05 CGCTCTCTAG CAACAggt actcggcact chr3L:18863429-18863549 42 1.48e-05 TCAGCTGAGG CAACAGGT GCCAAAGGCC chr2L:7400463-7400583 86 1.48e-05 CTGACAGAGG CAACAGGT TGAATTTAGC chr2R:15382439-15382559 57 1.48e-05 GCAGCAACAA CAACAGGT TGCCAAAGAC chr3R:11670059-11670179 103 1.48e-05 GCGCCGGCAG CAACAGGT GGCCAGGAAA chr2L:19985777-19985897 16 2.95e-05 CCTATTTATT CAACAAGT TCCGCTGCTG chr2L:13046003-13046123 33 2.95e-05 ACAAAGGAAG CAACAAGT GAACATCAAT chr3R:21967984-21968104 52 2.95e-05 CAAGGGCACA CAACAAGT GGCAGGAGCG chr3R:26862358-26862478 50 2.95e-05 GACCAAAAGG CAACAAGT GCGCAGTGAA chr3R:22080355-22080475 88 2.95e-05 CGATTTGTGG CAACAAGT GTCCTTCGAG chr3L:2702600-2702720 63 2.95e-05 CCGAGGGGAT CAACAAGT GCAGCTAAGG chr2L:7460771-7460891 80 2.95e-05 CGGGCAATAG CAACAAGT GTTATCGTTT chr2L:7767568-7767688 63 2.95e-05 ACGCAGTGTT CAACAAGT AGTAGGTGCA chr3R:22389577-22389697 5 2.95e-05 AAAG CAACAAGT AATTAAAAGT chr3L:14189581-14189701 91 2.95e-05 TGCACCTGTT CAACAAGT CTCATTGGCC chr2R:16071122-16071242 49 2.95e-05 CGATTTTAGC CAACAAGT GAAGCAACAA chr3R:26531642-26531762 44 2.95e-05 CTTTCAAACT CAACAAGT TTTTTTTTCT chr3R:5799545-5799665 21 2.95e-05 GGAGGGGCAA CAACAAGT GTCCAATTTC chr2L:16135535-16135655 32 2.95e-05 GCCGAAGGCG CAACAAGT CGGAAAAGCC chr2L:6899492-6899612 28 2.95e-05 CATGCACGAA CAACAAGT GTGTTTGATG chrX:7156857-7156977 44 2.95e-05 GTTGCTGCCG CAACAAGT TGCCTCATTT chrX:12085515-12085635 43 2.95e-05 CTGGCAGATT CAACAAGT TATATGGGGG chr3L:9456528-9456648 83 2.95e-05 ACAGTAAACG CAACAAGT AAGGAACCGG chr3L:9917020-9917140 55 2.95e-05 CGGTCAACCG CAACAAGT GAACGCCCCT chr3L:2282584-2282704 17 2.95e-05 TCTGCAACTT CAACAAGT CGTCCAGCTG chrX:3195998-3196118 50 2.95e-05 AACCGAAAAT CAACAAGT GAAAATGCAA chr2R:12687350-12687470 72 2.95e-05 TGCCCAAAAG CAACAAGT TTTTGAACTT chr3L:17822992-17823112 31 2.95e-05 ACTGGTGGAG CAACAAGT GTTTTGGCCA chr3R:9199869-9199989 113 2.95e-05 ATTGCATTTG CAACAAGT chrX:18349501-18349621 49 2.95e-05 GCCGAGTGCG CAACAAGT Cggaatggca chr2R:13526796-13526916 35 2.95e-05 CGTGCCATCT CAACAAGT TGCTCGAGTG chr2L:16389575-16389695 54 2.95e-05 TCCCATCGAG CAACAAGT GCACACTCGG chr2R:14747053-14747173 80 2.95e-05 GACAATGCAG CAACAAGT GGCGTCAATG chr2L:12053514-12053634 39 2.95e-05 CAAGGACACT CAACAAGT TTCCACTTGT chr3R:23664567-23664687 11 2.95e-05 TCAAACAAAG CAACAAGT GAGCTTTTCA chr3R:31351081-31351201 50 4.46e-05 TTCAATGGCT CAACAGTT TGCCAGTGTT chr3R:12021105-12021225 44 4.46e-05 GAACAGCATG CAACAGTT TGTCGTCCCC chrX:12835664-12835784 88 4.46e-05 TGAATGGTGG CAACAGTT TTTGGCCACC chr3R:20376614-20376734 41 4.46e-05 CAAAGAGGCG CAACAGTT TTAGCAATAA chr3R:26996770-26996890 44 4.46e-05 CCGCCAAAAG CAACAGTT GCTGCCTGCG chr3L:11938857-11938977 87 4.46e-05 ACAGCAGCAG CAACAGTT TCCGCAAGGA chr2R:9376663-9376783 97 4.46e-05 GCGGAAAATT CAACAGTT GTGCAGAAGC chr2R:16973759-16973879 56 4.46e-05 AAAAACAATT CAACAGTT TGTTGCCAGC chr3R:18159560-18159680 17 4.46e-05 CAGTGGGAAG CAACAGTT CGGTCTCTGC chr2R:17873820-17873940 1 4.46e-05 . CAACAGTT TGCCGTGGTG chr2R:19581121-19581241 22 4.46e-05 GCAACGAAAT CAACAGTT AGCCAATGAG chr2L:14244380-14244500 58 4.46e-05 CTTACACACT CAACAGTT ATGCAATGTT chr3R:26682140-26682260 63 4.46e-05 TGCGCCACGG CAACAGTT CCCTGCCGAA chr3L:11937409-11937529 28 4.46e-05 GCTCCGTACG CAACAGTT TCGTCCTCCT chr2R:10347213-10347333 19 4.46e-05 CAAAAATGCG CAACAGTT TAAAAAGTAG chr3L:15541395-15541515 82 4.46e-05 AACAAGGAAG CAACAGTT AGCTGCTTCT chr2R:10085005-10085125 54 4.46e-05 TGGGAGAGAG CAACAGTT CGTTCCCGGA chrX:13012400-13012520 35 5.90e-05 TTCTGCCAAG CAACAGGC AAAATGTGTG chr2R:7543436-7543556 82 5.90e-05 GGGTGGCATG CAACAGGC TGTCTTGCCA chr2L:14103572-14103692 9 5.90e-05 AAGAGGAG CAACAGGC GGTCGCTGGG chrX:9656011-9656131 48 5.90e-05 ACAGGCATAG CAACAGGC TGCCGCCACC chr2R:6799886-6800006 55 5.90e-05 ACCAGCTCTT CAACAGGC ACTTGTCCGT chr2R:17890488-17890608 38 5.90e-05 AATACTTGCT CAACAGGC TGCCACGCCC chrX:1398130-1398250 65 5.90e-05 AATTGCCCAG CAACAGGC GATTtgttgg chrX:1476576-1476696 90 5.90e-05 CGTTGGCCGC CAACAGGC AGTCCCTTTT chr3L:18968332-18968452 62 5.90e-05 AAACTATGTG CAACAGGC CGTCGTTGTT chr2R:12072796-12072916 45 5.90e-05 gtgtgtgAAT CAACAGGC CACGCGCAAC chrX:10454913-10455033 79 5.90e-05 CAGCTGTTGC CAACAGGC GAACCTGTTA chr2R:11845110-11845230 40 5.90e-05 GTGGTTCTGG CAACAGGC GGCCAAAAGA chrX:18347780-18347900 26 5.90e-05 GCAAAAGGCG CAACAGGC CGCTGTCGTC chr2L:16543947-16544067 46 7.40e-05 GTCGCAAAAG CAACAATT TTCAACCGCG chr3L:4007288-4007408 40 8.84e-05 GCAACATCCA CAACAAGC ACAATAACAA chr3L:9905146-9905266 48 8.84e-05 CATAAACAAG CAACAAGC AGGGcacaca chr2L:2911064-2911184 36 8.84e-05 aaagcaaaag caacaagc aacGCCAACA chr2L:19917147-19917267 23 1.03e-04 AACTTTGCGC CAACAGCT GTATCTGGCT chr2R:9386827-9386947 41 1.03e-04 TGGGCAGCGG CAACAGCT TCAACTTGTT chr3R:19407047-19407167 18 1.03e-04 GGTGAGCAAT CAACAGCT CCATTAAAGC chr2R:14377923-14378043 64 1.03e-04 AAAGCTTTTT CAACAGCT TGTGGAATGC chr3L:5448006-5448126 65 1.03e-04 acaaTGGAAG CAACAGCT GCGTTGATGG chr3R:24264475-24264595 17 1.03e-04 TATTCACACG CAACAGCT GCTTGACTGG chr2R:8013305-8013425 83 1.18e-04 CTAACTAATT CAACAGTC CTCGAAGGGT chr2L:17560258-17560378 51 1.18e-04 AAGCCGGCAG CAACAGTC TGCTTGTGTA chr2R:6050683-6050803 21 1.47e-04 GCAGCGCCAG CAACAGAT GGGTGCCAAA chrX:18063530-18063650 37 1.62e-04 CAGGCAGGCG CAACAATC GCCGCCACAC chr3R:14214906-14215026 5 2.05e-04 CATT CAACAGGA TATGTCGCTC chr3R:25199723-25199843 64 2.05e-04 GCAGGAACAG CAACAGGA ATCAGTTTGT chr3L:3492229-3492349 95 2.05e-04 CGAGCCTTTG CAACAAAT CGATATTTTA chr3R:27663013-27663133 33 2.05e-04 AATTGGAAAT CAACAGGA GCAGCGTGTT chr2L:15511763-15511883 65 2.05e-04 TGCTCGCACT CAACAAAT TGTTTCCCCC chrX:1587924-1588044 94 2.05e-04 GGGCCCAAAT CAACAAAT TATCACACAT chrX:13763975-13764095 47 2.20e-04 ACAAAGCGTG CCACAGGT GTGCACGAAG chr2R:24243538-24243658 56 2.20e-04 GACTCGGCAG CCACAGGT GGTGCTCCTG chr3R:21043716-21043836 106 2.49e-04 GCCACGATAG CAACAAGG TGCCTGA chr3L:5201513-5201633 79 2.49e-04 ACCTGTTGAG CAACAAGg acgagaaacg chr2L:1836259-1836379 1 2.64e-04 . CCACAAGT TATGAAAGCT chr2R:13424156-13424276 59 2.64e-04 GGATAATCAG CCACAAGT GGGCGTGGCG chr3R:5376735-5376855 61 2.93e-04 TTCGCAAATT CAACTGGT AGCCGCCGCA chr3L:10290515-10290635 68 3.07e-04 AGCGGGGCAA CAACAACC ACCAGTTGAT chr2L:14116111-14116231 45 3.37e-04 GGCAGAGAAG CAACAGAC ACAACCACTT chrX:3376515-3376635 17 3.37e-04 GTTGCACATT CAACTAGT GTTCGCACTT chr3L:4016298-4016418 54 3.37e-04 tggTGCCATG CAACTAGT GTCAAGAATC chr3L:2846657-2846777 46 3.66e-04 GATGTTCGAG CAACAGTG TTGTGTCGCC chr2L:11082163-11082283 5 4.10e-04 CCAC CCACAGGC ACCGCCTACC chr2L:6055283-6055403 95 4.40e-04 TCGGCAGCAA CAACAATG GCAAATCTCG chr2L:16689789-16689909 77 5.58e-04 ACAAGAAAAG CAACAGCA TCCTCTTACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:18221000-18221120 1.5e-05 43_[+2]_69 chrX:9282412-9282532 1.5e-05 14_[+2]_98 chr2L:13285925-13286045 1.5e-05 41_[+2]_71 chr2R:18830899-18831019 1.5e-05 54_[+2]_58 chr3R:23666801-23666921 1.5e-05 39_[+2]_73 chr2R:14559945-14560065 1.5e-05 58_[+2]_54 chr2L:7593871-7593991 1.5e-05 46_[+2]_66 chr3R:21775951-21776071 1.5e-05 59_[+2]_53 chrX:9523175-9523295 1.5e-05 6_[+2]_106 chr3L:16301066-16301186 1.5e-05 86_[+2]_26 chr2L:11875085-11875205 1.5e-05 53_[+2]_59 chr3L:9770202-9770322 1.5e-05 68_[+2]_44 chr3R:24635113-24635233 1.5e-05 71_[+2]_41 chrX:1811298-1811418 1.5e-05 56_[+2]_56 chr3L:18863429-18863549 1.5e-05 41_[+2]_71 chr2L:7400463-7400583 1.5e-05 85_[+2]_27 chr2R:15382439-15382559 1.5e-05 56_[+2]_56 chr3R:11670059-11670179 1.5e-05 102_[+2]_10 chr2L:19985777-19985897 2.9e-05 15_[+2]_97 chr2L:13046003-13046123 2.9e-05 32_[+2]_80 chr3R:21967984-21968104 2.9e-05 51_[+2]_61 chr3R:26862358-26862478 2.9e-05 49_[+2]_63 chr3R:22080355-22080475 2.9e-05 87_[+2]_25 chr3L:2702600-2702720 2.9e-05 62_[+2]_50 chr2L:7460771-7460891 2.9e-05 79_[+2]_33 chr2L:7767568-7767688 2.9e-05 62_[+2]_50 chr3R:22389577-22389697 2.9e-05 4_[+2]_108 chr3L:14189581-14189701 2.9e-05 90_[+2]_22 chr2R:16071122-16071242 2.9e-05 48_[+2]_64 chr3R:26531642-26531762 2.9e-05 43_[+2]_69 chr3R:5799545-5799665 2.9e-05 20_[+2]_92 chr2L:16135535-16135655 2.9e-05 31_[+2]_81 chr2L:6899492-6899612 2.9e-05 27_[+2]_85 chrX:7156857-7156977 2.9e-05 43_[+2]_69 chrX:12085515-12085635 2.9e-05 42_[+2]_70 chr3L:9456528-9456648 2.9e-05 82_[+2]_30 chr3L:9917020-9917140 2.9e-05 54_[+2]_58 chr3L:2282584-2282704 2.9e-05 16_[+2]_96 chrX:3195998-3196118 2.9e-05 49_[+2]_63 chr2R:12687350-12687470 2.9e-05 71_[+2]_41 chr3L:17822992-17823112 2.9e-05 30_[+2]_82 chr3R:9199869-9199989 2.9e-05 112_[+2] chrX:18349501-18349621 2.9e-05 48_[+2]_64 chr2R:13526796-13526916 2.9e-05 34_[+2]_78 chr2L:16389575-16389695 2.9e-05 53_[+2]_59 chr2R:14747053-14747173 2.9e-05 79_[+2]_33 chr2L:12053514-12053634 2.9e-05 38_[+2]_74 chr3R:23664567-23664687 2.9e-05 10_[+2]_102 chr3R:31351081-31351201 4.5e-05 49_[+2]_63 chr3R:12021105-12021225 4.5e-05 43_[+2]_69 chrX:12835664-12835784 4.5e-05 87_[+2]_25 chr3R:20376614-20376734 4.5e-05 40_[+2]_72 chr3R:26996770-26996890 4.5e-05 43_[+2]_69 chr3L:11938857-11938977 4.5e-05 86_[+2]_26 chr2R:9376663-9376783 4.5e-05 96_[+2]_16 chr2R:16973759-16973879 4.5e-05 55_[+2]_57 chr3R:18159560-18159680 4.5e-05 16_[+2]_96 chr2R:17873820-17873940 4.5e-05 [+2]_112 chr2R:19581121-19581241 4.5e-05 21_[+2]_91 chr2L:14244380-14244500 4.5e-05 57_[+2]_55 chr3R:26682140-26682260 4.5e-05 62_[+2]_50 chr3L:11937409-11937529 4.5e-05 27_[+2]_85 chr2R:10347213-10347333 4.5e-05 18_[+2]_94 chr3L:15541395-15541515 4.5e-05 81_[+2]_31 chr2R:10085005-10085125 4.5e-05 53_[+2]_59 chrX:13012400-13012520 5.9e-05 34_[+2]_78 chr2R:7543436-7543556 5.9e-05 81_[+2]_31 chr2L:14103572-14103692 5.9e-05 8_[+2]_104 chrX:9656011-9656131 5.9e-05 47_[+2]_65 chr2R:6799886-6800006 5.9e-05 54_[+2]_58 chr2R:17890488-17890608 5.9e-05 37_[+2]_75 chrX:1398130-1398250 5.9e-05 64_[+2]_48 chrX:1476576-1476696 5.9e-05 89_[+2]_23 chr3L:18968332-18968452 5.9e-05 61_[+2]_51 chr2R:12072796-12072916 5.9e-05 44_[+2]_68 chrX:10454913-10455033 5.9e-05 78_[+2]_34 chr2R:11845110-11845230 5.9e-05 39_[+2]_73 chrX:18347780-18347900 5.9e-05 25_[+2]_87 chr2L:16543947-16544067 7.4e-05 45_[+2]_67 chr3L:4007288-4007408 8.8e-05 39_[+2]_73 chr3L:9905146-9905266 8.8e-05 47_[+2]_65 chr2L:2911064-2911184 8.8e-05 35_[+2]_77 chr2L:19917147-19917267 0.0001 22_[+2]_90 chr2R:9386827-9386947 0.0001 40_[+2]_72 chr3R:19407047-19407167 0.0001 17_[+2]_95 chr2R:14377923-14378043 0.0001 63_[+2]_49 chr3L:5448006-5448126 0.0001 64_[+2]_48 chr3R:24264475-24264595 0.0001 16_[+2]_96 chr2R:8013305-8013425 0.00012 82_[+2]_30 chr2L:17560258-17560378 0.00012 50_[+2]_62 chr2R:6050683-6050803 0.00015 20_[+2]_92 chrX:18063530-18063650 0.00016 36_[+2]_76 chr3R:14214906-14215026 0.00021 4_[+2]_108 chr3R:25199723-25199843 0.00021 63_[+2]_49 chr3L:3492229-3492349 0.00021 94_[+2]_18 chr3R:27663013-27663133 0.00021 32_[+2]_80 chr2L:15511763-15511883 0.00021 64_[+2]_48 chrX:1587924-1588044 0.00021 93_[+2]_19 chrX:13763975-13764095 0.00022 46_[+2]_66 chr2R:24243538-24243658 0.00022 55_[+2]_57 chr3R:21043716-21043836 0.00025 105_[+2]_7 chr3L:5201513-5201633 0.00025 78_[+2]_34 chr2L:1836259-1836379 0.00026 [+2]_112 chr2R:13424156-13424276 0.00026 58_[+2]_54 chr3R:5376735-5376855 0.00029 60_[+2]_52 chr3L:10290515-10290635 0.00031 67_[+2]_45 chr2L:14116111-14116231 0.00034 44_[+2]_68 chrX:3376515-3376635 0.00034 16_[+2]_96 chr3L:4016298-4016418 0.00034 53_[+2]_59 chr3L:2846657-2846777 0.00037 45_[+2]_67 chr2L:11082163-11082283 0.00041 4_[+2]_108 chr2L:6055283-6055403 0.00044 94_[+2]_18 chr2L:16689789-16689909 0.00056 76_[+2]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAACARGT width=8 seqs=113 chrX:18221000-18221120 ( 44) CAACAGGT 1 chrX:9282412-9282532 ( 15) CAACAGGT 1 chr2L:13285925-13286045 ( 42) CAACAGGT 1 chr2R:18830899-18831019 ( 55) CAACAGGT 1 chr3R:23666801-23666921 ( 40) CAACAGGT 1 chr2R:14559945-14560065 ( 59) CAACAGGT 1 chr2L:7593871-7593991 ( 47) CAACAGGT 1 chr3R:21775951-21776071 ( 60) CAACAGGT 1 chrX:9523175-9523295 ( 7) CAACAGGT 1 chr3L:16301066-16301186 ( 87) CAACAGGT 1 chr2L:11875085-11875205 ( 54) CAACAGGT 1 chr3L:9770202-9770322 ( 69) CAACAGGT 1 chr3R:24635113-24635233 ( 72) CAACAGGT 1 chrX:1811298-1811418 ( 57) CAACAGGT 1 chr3L:18863429-18863549 ( 42) CAACAGGT 1 chr2L:7400463-7400583 ( 86) CAACAGGT 1 chr2R:15382439-15382559 ( 57) CAACAGGT 1 chr3R:11670059-11670179 ( 103) CAACAGGT 1 chr2L:19985777-19985897 ( 16) CAACAAGT 1 chr2L:13046003-13046123 ( 33) CAACAAGT 1 chr3R:21967984-21968104 ( 52) CAACAAGT 1 chr3R:26862358-26862478 ( 50) CAACAAGT 1 chr3R:22080355-22080475 ( 88) CAACAAGT 1 chr3L:2702600-2702720 ( 63) CAACAAGT 1 chr2L:7460771-7460891 ( 80) CAACAAGT 1 chr2L:7767568-7767688 ( 63) CAACAAGT 1 chr3R:22389577-22389697 ( 5) CAACAAGT 1 chr3L:14189581-14189701 ( 91) CAACAAGT 1 chr2R:16071122-16071242 ( 49) CAACAAGT 1 chr3R:26531642-26531762 ( 44) CAACAAGT 1 chr3R:5799545-5799665 ( 21) CAACAAGT 1 chr2L:16135535-16135655 ( 32) CAACAAGT 1 chr2L:6899492-6899612 ( 28) CAACAAGT 1 chrX:7156857-7156977 ( 44) CAACAAGT 1 chrX:12085515-12085635 ( 43) CAACAAGT 1 chr3L:9456528-9456648 ( 83) CAACAAGT 1 chr3L:9917020-9917140 ( 55) CAACAAGT 1 chr3L:2282584-2282704 ( 17) CAACAAGT 1 chrX:3195998-3196118 ( 50) CAACAAGT 1 chr2R:12687350-12687470 ( 72) CAACAAGT 1 chr3L:17822992-17823112 ( 31) CAACAAGT 1 chr3R:9199869-9199989 ( 113) CAACAAGT 1 chrX:18349501-18349621 ( 49) CAACAAGT 1 chr2R:13526796-13526916 ( 35) CAACAAGT 1 chr2L:16389575-16389695 ( 54) CAACAAGT 1 chr2R:14747053-14747173 ( 80) CAACAAGT 1 chr2L:12053514-12053634 ( 39) CAACAAGT 1 chr3R:23664567-23664687 ( 11) CAACAAGT 1 chr3R:31351081-31351201 ( 50) CAACAGTT 1 chr3R:12021105-12021225 ( 44) CAACAGTT 1 chrX:12835664-12835784 ( 88) CAACAGTT 1 chr3R:20376614-20376734 ( 41) CAACAGTT 1 chr3R:26996770-26996890 ( 44) CAACAGTT 1 chr3L:11938857-11938977 ( 87) CAACAGTT 1 chr2R:9376663-9376783 ( 97) CAACAGTT 1 chr2R:16973759-16973879 ( 56) CAACAGTT 1 chr3R:18159560-18159680 ( 17) CAACAGTT 1 chr2R:17873820-17873940 ( 1) CAACAGTT 1 chr2R:19581121-19581241 ( 22) CAACAGTT 1 chr2L:14244380-14244500 ( 58) CAACAGTT 1 chr3R:26682140-26682260 ( 63) CAACAGTT 1 chr3L:11937409-11937529 ( 28) CAACAGTT 1 chr2R:10347213-10347333 ( 19) CAACAGTT 1 chr3L:15541395-15541515 ( 82) CAACAGTT 1 chr2R:10085005-10085125 ( 54) CAACAGTT 1 chrX:13012400-13012520 ( 35) CAACAGGC 1 chr2R:7543436-7543556 ( 82) CAACAGGC 1 chr2L:14103572-14103692 ( 9) CAACAGGC 1 chrX:9656011-9656131 ( 48) CAACAGGC 1 chr2R:6799886-6800006 ( 55) CAACAGGC 1 chr2R:17890488-17890608 ( 38) CAACAGGC 1 chrX:1398130-1398250 ( 65) CAACAGGC 1 chrX:1476576-1476696 ( 90) CAACAGGC 1 chr3L:18968332-18968452 ( 62) CAACAGGC 1 chr2R:12072796-12072916 ( 45) CAACAGGC 1 chrX:10454913-10455033 ( 79) CAACAGGC 1 chr2R:11845110-11845230 ( 40) CAACAGGC 1 chrX:18347780-18347900 ( 26) CAACAGGC 1 chr2L:16543947-16544067 ( 46) CAACAATT 1 chr3L:4007288-4007408 ( 40) CAACAAGC 1 chr3L:9905146-9905266 ( 48) CAACAAGC 1 chr2L:2911064-2911184 ( 36) CAACAAGC 1 chr2L:19917147-19917267 ( 23) CAACAGCT 1 chr2R:9386827-9386947 ( 41) CAACAGCT 1 chr3R:19407047-19407167 ( 18) CAACAGCT 1 chr2R:14377923-14378043 ( 64) CAACAGCT 1 chr3L:5448006-5448126 ( 65) CAACAGCT 1 chr3R:24264475-24264595 ( 17) CAACAGCT 1 chr2R:8013305-8013425 ( 83) CAACAGTC 1 chr2L:17560258-17560378 ( 51) CAACAGTC 1 chr2R:6050683-6050803 ( 21) CAACAGAT 1 chrX:18063530-18063650 ( 37) CAACAATC 1 chr3R:14214906-14215026 ( 5) CAACAGGA 1 chr3R:25199723-25199843 ( 64) CAACAGGA 1 chr3L:3492229-3492349 ( 95) CAACAAAT 1 chr3R:27663013-27663133 ( 33) CAACAGGA 1 chr2L:15511763-15511883 ( 65) CAACAAAT 1 chrX:1587924-1588044 ( 94) CAACAAAT 1 chrX:13763975-13764095 ( 47) CCACAGGT 1 chr2R:24243538-24243658 ( 56) CCACAGGT 1 chr3R:21043716-21043836 ( 106) CAACAAGG 1 chr3L:5201513-5201633 ( 79) CAACAAGG 1 chr2L:1836259-1836379 ( 1) CCACAAGT 1 chr2R:13424156-13424276 ( 59) CCACAAGT 1 chr3R:5376735-5376855 ( 61) CAACTGGT 1 chr3L:10290515-10290635 ( 68) CAACAACC 1 chr2L:14116111-14116231 ( 45) CAACAGAC 1 chrX:3376515-3376635 ( 17) CAACTAGT 1 chr3L:4016298-4016418 ( 54) CAACTAGT 1 chr3L:2846657-2846777 ( 46) CAACAGTG 1 chr2L:11082163-11082283 ( 5) CCACAGGC 1 chr2L:6055283-6055403 ( 95) CAACAATG 1 chr2L:16689789-16689909 ( 77) CAACAGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.19254 E= 1.1e-087 -1346 201 -1346 -1346 194 -249 -1346 -1346 201 -1346 -1346 -1346 -1346 201 -1346 -1346 197 -1346 -1346 -326 71 -1346 125 -1346 -249 -181 145 -32 -281 -35 -281 153 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 113 E= 1.1e-087 0.000000 1.000000 0.000000 0.000000 0.955752 0.044248 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.973451 0.000000 0.000000 0.026549 0.407080 0.000000 0.592920 0.000000 0.044248 0.070796 0.681416 0.203540 0.035398 0.194690 0.035398 0.734513 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACARGT MEME-2 regular expression -------------------------------------------------------------------------------- CAACA[GA][GT]T -------------------------------------------------------------------------------- Time 13.10 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCAGCA MEME-3 width = 8 sites = 8 llr = 86 E-value = 2.3e+006 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a::a::a pos.-specific C a::a::a: probability G ::9::a:: matrix T ::1::::: bits 2.0 ** ***** 1.8 ** ***** 1.6 ** ***** 1.4 ******** Relative 1.2 ******** Entropy 1.0 ******** (15.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGCAGCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:1754310-1754430 83 1.44e-05 CGTGGTCGGT CAGCAGCA GCCACGTGTT chr3R:21967984-21968104 77 1.44e-05 GCGAAAGGAG CAGCAGCA TCGCCAACAA chr3L:11938857-11938977 78 1.44e-05 GCACTGCTAA CAGCAGCA GCAACAGTTT chr2R:16109229-16109349 49 1.44e-05 GAGTCCTCTG CAGCAGCA AAAAAGAAAA chr2R:16054194-16054314 31 1.44e-05 CACCCACACT CAGCAGCA GACACATGCA chr3R:11670059-11670179 46 1.44e-05 TCGACGACAC CAGCAGCA CCAGCAACTG chr2L:16389575-16389695 100 1.44e-05 AATTGCTTCC CAGCAGCA GAAATAAATG chr2L:9321136-9321256 25 2.91e-05 GAGTTCAACC CATCAGCA GACAGCTGTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:1754310-1754430 1.4e-05 82_[+3]_30 chr3R:21967984-21968104 1.4e-05 76_[+3]_36 chr3L:11938857-11938977 1.4e-05 77_[+3]_35 chr2R:16109229-16109349 1.4e-05 48_[+3]_64 chr2R:16054194-16054314 1.4e-05 30_[+3]_82 chr3R:11670059-11670179 1.4e-05 45_[+3]_67 chr2L:16389575-16389695 1.4e-05 99_[+3]_13 chr2L:9321136-9321256 2.9e-05 24_[+3]_88 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCAGCA width=8 seqs=8 chrX:1754310-1754430 ( 83) CAGCAGCA 1 chr3R:21967984-21968104 ( 77) CAGCAGCA 1 chr3L:11938857-11938977 ( 78) CAGCAGCA 1 chr2R:16109229-16109349 ( 49) CAGCAGCA 1 chr2R:16054194-16054314 ( 31) CAGCAGCA 1 chr3R:11670059-11670179 ( 46) CAGCAGCA 1 chr2L:16389575-16389695 ( 100) CAGCAGCA 1 chr2L:9321136-9321256 ( 25) CATCAGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.7856 E= 2.3e+006 -965 201 -965 -965 201 -965 -965 -965 -965 -965 181 -102 -965 201 -965 -965 201 -965 -965 -965 -965 -965 200 -965 -965 201 -965 -965 201 -965 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 2.3e+006 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.875000 0.125000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCAGCA MEME-3 regular expression -------------------------------------------------------------------------------- CAGCAGCA -------------------------------------------------------------------------------- Time 18.85 secs. ******************************************************************************** ******************************************************************************** MOTIF GGAAAAGC MEME-4 width = 8 sites = 30 llr = 264 E-value = 1.5e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1:9aaa2: pos.-specific C 11:::::8 probability G 891:::72 matrix T ::::::1: bits 2.0 *** 1.8 *** 1.6 ***** 1.4 ***** * Relative 1.2 ****** * Entropy 1.0 ****** * (12.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGAAAAGC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:26996770-26996890 87 1.45e-05 ACATGTGGAT GGAAAAGC CGGGAAAAGG chr3R:23666801-23666921 104 1.45e-05 TTTAGGATAC GGAAAAGC TATGCAGTA chrX:3931070-3931190 80 1.45e-05 GAAAAGTTGT GGAAAAGC GGTGGAAAAG chr2R:10266021-10266141 107 1.45e-05 GGAGAAAAGC GGAAAAGC GGAGAG chr2R:17873820-17873940 34 1.45e-05 AAAAGCTCTC GGAAAAGC TCGGGAAAAA chr2L:16135535-16135655 41 1.45e-05 GCAACAAGTC GGAAAAGC CAAGCCGCGA chrX:12085515-12085635 23 1.45e-05 TTTGCCTGCA GGAAAAGC TGCTGGCAGA chr3R:4319138-4319258 20 1.45e-05 CACAGGGCTC GGAAAAGC TCCGTTTCGA chr2L:13046003-13046123 12 2.89e-05 AAAATAAACT GGAAAAAC CCCACAAAGG chr2L:14103572-14103692 85 2.89e-05 TTCATGGTTG GGAAAAAC GAGCGCCACG chr3R:22080355-22080475 47 2.89e-05 ACGGCACAAC GGAAAAAC GGCTCATTTA chr3L:18968332-18968452 2 2.89e-05 G GGAAAAAC AAAGAGAGTC chr3R:27663013-27663133 14 2.89e-05 CTAGTCGCTG GGAAAAAC AAATTGGAAA chr3R:31351081-31351201 8 4.34e-05 ACGAAAG GGAAAAGG AAACGAGGGC chr3L:1629203-1629323 60 4.34e-05 GCAGCGACTG GGAAAAGG GAATCGCGAG chr2R:19581121-19581241 61 4.34e-05 CAGACAGGAC GGAAAAGG AGAAAACAAC chrX:18349501-18349621 13 4.34e-05 CTAGGCGAAA GGAAAAGG AACCAAAAGG chr3R:6435268-6435388 108 5.82e-05 CCAAAGGGGT GGAAAATC GGCGA chr2R:8013305-8013425 6 5.82e-05 GTAAC GGAAAATC GATATGGCGA chrX:3376515-3376635 98 5.82e-05 ATAGGCAACC GGAAAATC GATTGGCGGA chr3L:7313897-7314017 3 7.26e-05 CT CGAAAAGC TGCGAAAAAG chr2L:20051338-20051458 33 7.26e-05 AAATAAGGGG CGAAAAGC CTCGTCAAAG chr2L:7587268-7587388 101 7.26e-05 CTTTTCCTTT CGAAAAGC ACTGCTACTG chr3L:4007288-4007408 94 8.71e-05 ACTTGTTACC AGAAAAGC GAACGGGGGA chr3L:16555596-16555716 36 8.71e-05 AAGCTGGGCA AGAAAAGC TGGGCCTCCT chr3R:14214906-14215026 99 1.16e-04 GCTGTATTGA GGGAAAGC ACCTGTTGTT chr2L:13066094-13066214 14 1.16e-04 AGGGAGCAAG GGGAAAGC ATGGCCAACA chr2L:2911064-2911184 23 1.16e-04 caaccaacca gcaaaagc aaaagcaaca chr3R:20946939-20947059 100 1.16e-04 caaagcaaaa gcaaaagc gaaagccaaa chr2R:13536660-13536780 34 1.45e-04 GCCAGTCAGA GGAAAATG CCGAAGCGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:26996770-26996890 1.4e-05 86_[+4]_26 chr3R:23666801-23666921 1.4e-05 103_[+4]_9 chrX:3931070-3931190 1.4e-05 79_[+4]_33 chr2R:10266021-10266141 1.4e-05 106_[+4]_6 chr2R:17873820-17873940 1.4e-05 33_[+4]_79 chr2L:16135535-16135655 1.4e-05 40_[+4]_72 chrX:12085515-12085635 1.4e-05 22_[+4]_90 chr3R:4319138-4319258 1.4e-05 19_[+4]_93 chr2L:13046003-13046123 2.9e-05 11_[+4]_101 chr2L:14103572-14103692 2.9e-05 84_[+4]_28 chr3R:22080355-22080475 2.9e-05 46_[+4]_66 chr3L:18968332-18968452 2.9e-05 1_[+4]_111 chr3R:27663013-27663133 2.9e-05 13_[+4]_99 chr3R:31351081-31351201 4.3e-05 7_[+4]_105 chr3L:1629203-1629323 4.3e-05 59_[+4]_53 chr2R:19581121-19581241 4.3e-05 60_[+4]_52 chrX:18349501-18349621 4.3e-05 12_[+4]_100 chr3R:6435268-6435388 5.8e-05 107_[+4]_5 chr2R:8013305-8013425 5.8e-05 5_[+4]_107 chrX:3376515-3376635 5.8e-05 97_[+4]_15 chr3L:7313897-7314017 7.3e-05 2_[+4]_110 chr2L:20051338-20051458 7.3e-05 32_[+4]_80 chr2L:7587268-7587388 7.3e-05 100_[+4]_12 chr3L:4007288-4007408 8.7e-05 93_[+4]_19 chr3L:16555596-16555716 8.7e-05 35_[+4]_77 chr3R:14214906-14215026 0.00012 98_[+4]_14 chr2L:13066094-13066214 0.00012 13_[+4]_99 chr2L:2911064-2911184 0.00012 22_[+4]_90 chr3R:20946939-20947059 0.00012 99_[+4]_13 chr2R:13536660-13536780 0.00015 33_[+4]_79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGAAAAGC width=8 seqs=30 chr3R:26996770-26996890 ( 87) GGAAAAGC 1 chr3R:23666801-23666921 ( 104) GGAAAAGC 1 chrX:3931070-3931190 ( 80) GGAAAAGC 1 chr2R:10266021-10266141 ( 107) GGAAAAGC 1 chr2R:17873820-17873940 ( 34) GGAAAAGC 1 chr2L:16135535-16135655 ( 41) GGAAAAGC 1 chrX:12085515-12085635 ( 23) GGAAAAGC 1 chr3R:4319138-4319258 ( 20) GGAAAAGC 1 chr2L:13046003-13046123 ( 12) GGAAAAAC 1 chr2L:14103572-14103692 ( 85) GGAAAAAC 1 chr3R:22080355-22080475 ( 47) GGAAAAAC 1 chr3L:18968332-18968452 ( 2) GGAAAAAC 1 chr3R:27663013-27663133 ( 14) GGAAAAAC 1 chr3R:31351081-31351201 ( 8) GGAAAAGG 1 chr3L:1629203-1629323 ( 60) GGAAAAGG 1 chr2R:19581121-19581241 ( 61) GGAAAAGG 1 chrX:18349501-18349621 ( 13) GGAAAAGG 1 chr3R:6435268-6435388 ( 108) GGAAAATC 1 chr2R:8013305-8013425 ( 6) GGAAAATC 1 chrX:3376515-3376635 ( 98) GGAAAATC 1 chr3L:7313897-7314017 ( 3) CGAAAAGC 1 chr2L:20051338-20051458 ( 33) CGAAAAGC 1 chr2L:7587268-7587388 ( 101) CGAAAAGC 1 chr3L:4007288-4007408 ( 94) AGAAAAGC 1 chr3L:16555596-16555716 ( 36) AGAAAAGC 1 chr3R:14214906-14215026 ( 99) GGGAAAGC 1 chr2L:13066094-13066214 ( 14) GGGAAAGC 1 chr2L:2911064-2911184 ( 23) GCAAAAGC 1 chr3R:20946939-20947059 ( 100) GCAAAAGC 1 chr2R:13536660-13536780 ( 34) GGAAAATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.1531 E= 1.5e+002 -190 -131 174 -1155 -1155 -189 191 -1155 191 -1155 -190 -1155 201 -1155 -1155 -1155 201 -1155 -1155 -1155 201 -1155 -1155 -1155 -58 -1155 149 -93 -1155 175 -58 -1155 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 30 E= 1.5e+002 0.066667 0.100000 0.833333 0.000000 0.000000 0.066667 0.933333 0.000000 0.933333 0.000000 0.066667 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.166667 0.000000 0.700000 0.133333 0.000000 0.833333 0.166667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAGC MEME-4 regular expression -------------------------------------------------------------------------------- GGAAAAGC -------------------------------------------------------------------------------- Time 24.59 secs. ******************************************************************************** ******************************************************************************** MOTIF YTKTTKCT MEME-5 width = 8 sites = 48 llr = 378 E-value = 2.0e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C 4::3::7: probability G ::6::7:: matrix T 6a47a33a bits 2.0 * * * 1.8 * * * 1.6 * * * 1.4 * * * Relative 1.2 * ** ** Entropy 1.0 ******** (11.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTGTTGCT consensus C TC TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:25199723-25199843 45 1.63e-05 CTTCATTATT TTGTTGCT GGCAGGAACA chr2L:19998797-19998917 35 1.63e-05 CTCTGTCTAC TTGTTGCT GATAAACGTT chr3R:18316335-18316455 69 1.63e-05 GTCCTCGTTG TTGTTGCT GGTAATCAAC chr3R:6584636-6584756 16 1.63e-05 GTTTTGGCTG TTGTTGCT GTTTCGCCCC chrX:3573990-3574110 30 1.63e-05 TACAAATATT TTGTTGCT CCTTTGGGAA chr3R:7028707-7028827 37 3.21e-05 AAATCATCGC CTGTTGCT CATGTTGATG chr3R:26606599-26606719 20 3.21e-05 CTCCTTCAGC CTGTTGCT GTGCGTTCGG chr3L:15034816-15034936 69 3.21e-05 GCTCAATCAG CTGTTGCT CTCTTTCTGC chr3R:25196996-25197116 75 3.21e-05 TAGTCTGTTG CTGTTGCT GCTCGGTAAT chr2L:1043338-1043458 101 3.21e-05 ACGGCATCCC CTGTTGCT CCGCTGGAAG chr2L:2404510-2404630 31 3.21e-05 GGGGTGGTAG CTGTTGCT GCTAACAAGC chr3R:14876059-14876179 1 3.21e-05 . CTGTTGCT CCGCCGCGAG chr3L:15593548-15593668 107 3.21e-05 TTTCCAACGC CTGTTGCT CTTTCG chr2L:11082163-11082283 66 3.21e-05 GTAACGGCAC CTGTTGCT GATTAGCCCG chrX:10454913-10455033 29 3.21e-05 GGCCAGCGCA CTGTTGCT TCCCTGTTAA chr3L:884205-884325 67 4.87e-05 ACCTTGCTGT TTTTTGCT TGTTCAACTT chr3L:4007288-4007408 5 4.87e-05 ACAT TTTTTGCT TGTTTTTATT chrX:12085515-12085635 77 4.87e-05 ATGTGCCCCA TTTTTGCT ACCCCAACAC chr2L:2920793-2920913 76 6.53e-05 tttttttttt ttgtttct ttCGTGGGGG chr3L:4969439-4969559 95 1.14e-04 ATGTTTGTTG TTGTTGTT AGGACCGTCG chr2R:9351825-9351945 62 1.14e-04 CGCAGCATCC TTGCTGCT CCTGGCCCTC chr2L:11875085-11875205 30 1.14e-04 TTTGGTTTTT TTGTTGTT TACAGAGGGG chrX:13763975-13764095 2 1.14e-04 T TTGCTGCT TATTGTATTT chr2L:6899492-6899612 105 1.14e-04 CCACATCACA TTGTTGTT TGCTTAGC chr2L:15511763-15511883 40 1.14e-04 ACCTTCGTTC TTGCTGCT TACTTGTTGC chr3R:25612097-25612217 12 1.30e-04 ACATTCTGTt ctgtttct ctccctctct chr3R:26531642-26531762 54 1.47e-04 CAACAAGTTT TTTTTTCT CCACGCTCCA chrX:11293926-11294046 63 1.47e-04 CGTTTTTTTT TTTTTTCT TTGGCCAAAT chrX:3195998-3196118 105 1.47e-04 CATTCTTTTT TTTTTTCT CGAGTTTT chr3L:15036808-15036928 25 1.47e-04 TGCTCTTGAT TTTTTTCT GGCCGGATTT chr2L:17594226-17594346 43 1.47e-04 TTTCGCGGGC TTTTTTCT AAAATTGGCC chr3L:9643912-9644032 38 1.79e-04 gccactgctg ctgctgct gctgttcctg chr3R:31351081-31351201 112 2.12e-04 CTCTCAGCCT TTTCTGCT T chrX:13012400-13012520 2 2.12e-04 G TTTCTGCT ACTGTTCGGT chr3R:11695045-11695165 111 2.62e-04 TTGCATGCAT TTGTTTTT GT chr2L:7400463-7400583 70 2.62e-04 CGTCCACTAA TTGCTTCT GACAGAGGCA chr3L:7313897-7314017 105 3.10e-04 TTTTGTTTCC CTTCTGCT TTCCACCA chr2R:22264494-22264614 45 3.10e-04 GCGTGCCTTG CTTTTGTT TGTTATGGCT chr3L:21151626-21151746 19 3.10e-04 TTTTTATGAG CTTTTGTT GGCTTGTTGA chr2L:2637117-2637237 73 3.10e-04 GCAACTGTTG CTTCTGCT GTCTGCCCCT chr3L:20885333-20885453 73 3.43e-04 CTGTTGCGTC CTGTTTTT CACTCTCTTG chr3L:15541395-15541515 92 3.43e-04 CAACAGTTAG CTGCTTCT TGTGGGCGGA chr3L:2846657-2846777 4 3.77e-04 ATA TTTTTTTT ATTTTGGGTT chrX:18063530-18063650 84 3.77e-04 CGCCTTTCCC TTTTTTTT TGCCGGTCGC chr2R:9376663-9376783 69 3.92e-04 GCGCCAACAT CTGCTGTT GGTCGCGGCA chr2R:13536660-13536780 11 4.59e-04 ATAATACGCA TTGCTTTT TATCCGCCAG chr3R:13334182-13334302 84 4.59e-04 CAACTACCGG TTGCTTTT CGGTTCTCTG chr2L:7593871-7593991 17 4.59e-04 CCAATTGAAC CTTTTTTT GCGACCGCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:25199723-25199843 1.6e-05 44_[+5]_68 chr2L:19998797-19998917 1.6e-05 34_[+5]_78 chr3R:18316335-18316455 1.6e-05 68_[+5]_44 chr3R:6584636-6584756 1.6e-05 15_[+5]_97 chrX:3573990-3574110 1.6e-05 29_[+5]_83 chr3R:7028707-7028827 3.2e-05 36_[+5]_76 chr3R:26606599-26606719 3.2e-05 19_[+5]_93 chr3L:15034816-15034936 3.2e-05 68_[+5]_44 chr3R:25196996-25197116 3.2e-05 74_[+5]_38 chr2L:1043338-1043458 3.2e-05 100_[+5]_12 chr2L:2404510-2404630 3.2e-05 30_[+5]_82 chr3R:14876059-14876179 3.2e-05 [+5]_112 chr3L:15593548-15593668 3.2e-05 106_[+5]_6 chr2L:11082163-11082283 3.2e-05 65_[+5]_47 chrX:10454913-10455033 3.2e-05 28_[+5]_84 chr3L:884205-884325 4.9e-05 66_[+5]_46 chr3L:4007288-4007408 4.9e-05 4_[+5]_108 chrX:12085515-12085635 4.9e-05 76_[+5]_36 chr2L:2920793-2920913 6.5e-05 75_[+5]_37 chr3L:4969439-4969559 0.00011 94_[+5]_18 chr2R:9351825-9351945 0.00011 61_[+5]_51 chr2L:11875085-11875205 0.00011 29_[+5]_83 chrX:13763975-13764095 0.00011 1_[+5]_111 chr2L:6899492-6899612 0.00011 104_[+5]_8 chr2L:15511763-15511883 0.00011 39_[+5]_73 chr3R:25612097-25612217 0.00013 11_[+5]_101 chr3R:26531642-26531762 0.00015 53_[+5]_59 chrX:11293926-11294046 0.00015 62_[+5]_50 chrX:3195998-3196118 0.00015 104_[+5]_8 chr3L:15036808-15036928 0.00015 24_[+5]_88 chr2L:17594226-17594346 0.00015 42_[+5]_70 chr3L:9643912-9644032 0.00018 37_[+5]_75 chr3R:31351081-31351201 0.00021 111_[+5]_1 chrX:13012400-13012520 0.00021 1_[+5]_111 chr3R:11695045-11695165 0.00026 110_[+5]_2 chr2L:7400463-7400583 0.00026 69_[+5]_43 chr3L:7313897-7314017 0.00031 104_[+5]_8 chr2R:22264494-22264614 0.00031 44_[+5]_68 chr3L:21151626-21151746 0.00031 18_[+5]_94 chr2L:2637117-2637237 0.00031 72_[+5]_40 chr3L:20885333-20885453 0.00034 72_[+5]_40 chr3L:15541395-15541515 0.00034 91_[+5]_21 chr3L:2846657-2846777 0.00038 3_[+5]_109 chrX:18063530-18063650 0.00038 83_[+5]_29 chr2R:9376663-9376783 0.00039 68_[+5]_44 chr2R:13536660-13536780 0.00046 10_[+5]_102 chr3R:13334182-13334302 0.00046 83_[+5]_29 chr2L:7593871-7593991 0.00046 16_[+5]_96 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YTKTTKCT width=8 seqs=48 chr3R:25199723-25199843 ( 45) TTGTTGCT 1 chr2L:19998797-19998917 ( 35) TTGTTGCT 1 chr3R:18316335-18316455 ( 69) TTGTTGCT 1 chr3R:6584636-6584756 ( 16) TTGTTGCT 1 chrX:3573990-3574110 ( 30) TTGTTGCT 1 chr3R:7028707-7028827 ( 37) CTGTTGCT 1 chr3R:26606599-26606719 ( 20) CTGTTGCT 1 chr3L:15034816-15034936 ( 69) CTGTTGCT 1 chr3R:25196996-25197116 ( 75) CTGTTGCT 1 chr2L:1043338-1043458 ( 101) CTGTTGCT 1 chr2L:2404510-2404630 ( 31) CTGTTGCT 1 chr3R:14876059-14876179 ( 1) CTGTTGCT 1 chr3L:15593548-15593668 ( 107) CTGTTGCT 1 chr2L:11082163-11082283 ( 66) CTGTTGCT 1 chrX:10454913-10455033 ( 29) CTGTTGCT 1 chr3L:884205-884325 ( 67) TTTTTGCT 1 chr3L:4007288-4007408 ( 5) TTTTTGCT 1 chrX:12085515-12085635 ( 77) TTTTTGCT 1 chr2L:2920793-2920913 ( 76) TTGTTTCT 1 chr3L:4969439-4969559 ( 95) TTGTTGTT 1 chr2R:9351825-9351945 ( 62) TTGCTGCT 1 chr2L:11875085-11875205 ( 30) TTGTTGTT 1 chrX:13763975-13764095 ( 2) TTGCTGCT 1 chr2L:6899492-6899612 ( 105) TTGTTGTT 1 chr2L:15511763-15511883 ( 40) TTGCTGCT 1 chr3R:25612097-25612217 ( 12) CTGTTTCT 1 chr3R:26531642-26531762 ( 54) TTTTTTCT 1 chrX:11293926-11294046 ( 63) TTTTTTCT 1 chrX:3195998-3196118 ( 105) TTTTTTCT 1 chr3L:15036808-15036928 ( 25) TTTTTTCT 1 chr2L:17594226-17594346 ( 43) TTTTTTCT 1 chr3L:9643912-9644032 ( 38) CTGCTGCT 1 chr3R:31351081-31351201 ( 112) TTTCTGCT 1 chrX:13012400-13012520 ( 2) TTTCTGCT 1 chr3R:11695045-11695165 ( 111) TTGTTTTT 1 chr2L:7400463-7400583 ( 70) TTGCTTCT 1 chr3L:7313897-7314017 ( 105) CTTCTGCT 1 chr2R:22264494-22264614 ( 45) CTTTTGTT 1 chr3L:21151626-21151746 ( 19) CTTTTGTT 1 chr2L:2637117-2637237 ( 73) CTTCTGCT 1 chr3L:20885333-20885453 ( 73) CTGTTTTT 1 chr3L:15541395-15541515 ( 92) CTGCTTCT 1 chr3L:2846657-2846777 ( 4) TTTTTTTT 1 chrX:18063530-18063650 ( 84) TTTTTTTT 1 chr2R:9376663-9376783 ( 69) CTGCTGTT 1 chr2R:13536660-13536780 ( 11) TTGCTTTT 1 chr3R:13334182-13334302 ( 84) TTGCTTTT 1 chr2L:7593871-7593991 ( 17) CTTTTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.7851 E= 2.0e+005 -1223 75 -1223 120 -1223 -1223 -1223 197 -1223 -1223 137 48 -1223 13 -1223 152 -1223 -1223 -1223 197 -1223 -1223 142 39 -1223 155 -1223 9 -1223 -1223 -1223 197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 48 E= 2.0e+005 0.000000 0.416667 0.000000 0.583333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.645833 0.354167 0.000000 0.270833 0.000000 0.729167 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.666667 0.333333 0.000000 0.729167 0.000000 0.270833 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTKTTKCT MEME-5 regular expression -------------------------------------------------------------------------------- [TC]T[GT][TC]T[GT][CT]T -------------------------------------------------------------------------------- Time 30.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:10085005-10085125 4.93e-02 53_[+2(4.46e-05)]_59 chr3R:23664567-23664687 6.90e-03 10_[+2(2.95e-05)]_102 chr2L:17594226-17594346 2.38e-03 62_[+5(3.21e-05)]_50 chr2L:12053514-12053634 4.85e-05 38_[+2(2.95e-05)]_6_[+5(1.63e-05)]_\ 60 chr3R:24264475-24264595 4.67e-02 120 chr2R:14747053-14747173 9.12e-03 79_[+2(2.95e-05)]_33 chr2L:10837631-10837751 2.05e-03 88_[+1(9.34e-05)]_24 chr3L:15541395-15541515 1.30e-03 56_[+2(5.90e-05)]_17_[+2(4.46e-05)]_\ 31 chrX:3573990-3574110 4.87e-03 29_[+5(1.63e-05)]_21_[+1(6.24e-05)]_\ 54 chr2R:13296570-13296690 5.46e-03 93_[+1(3.14e-05)]_19 chr2L:1137147-1137267 3.40e-02 55_[+1(3.14e-05)]_57 chr2R:10347213-10347333 1.88e-01 18_[+2(4.46e-05)]_94 chr3L:11937409-11937529 2.04e-03 27_[+2(4.46e-05)]_53_[+1(9.34e-05)]_\ 24 chr2R:13424156-13424276 7.62e-02 120 chr2L:2637117-2637237 1.33e-03 66_[+5(3.21e-05)]_46 chrX:18347780-18347900 7.38e-04 25_[+2(5.90e-05)]_26_[+3(1.44e-05)]_\ 53 chr3R:14085694-14085814 1.45e-02 73_[+1(3.14e-05)]_39 chrX:11285132-11285252 3.56e-02 82_[+1(6.24e-05)]_30 chr2R:11845110-11845230 2.09e-02 39_[+2(5.90e-05)]_73 chr2L:16389575-16389695 5.63e-04 53_[+2(2.95e-05)]_38_[+3(1.44e-05)]_\ 13 chrX:1587924-1588044 5.96e-03 57_[+2(2.95e-05)]_55 chr2R:13526796-13526916 1.25e-03 34_[+2(2.95e-05)]_41_[+1(3.14e-05)]_\ 29 chr3L:15036808-15036928 2.32e-04 58_[+2(2.95e-05)]_54 chrX:18349501-18349621 5.68e-03 12_[+4(4.34e-05)]_28_[+2(2.95e-05)]_\ 64 chrX:10454913-10455033 1.27e-04 28_[+5(3.21e-05)]_42_[+2(5.90e-05)]_\ 34 chr3R:11670059-11670179 4.27e-07 45_[+3(1.44e-05)]_7_[+5(3.21e-05)]_\ 34_[+2(1.48e-05)]_10 chr3R:9199869-9199989 2.15e-02 112_[+2(2.95e-05)] chr2R:13193924-13194044 8.99e-02 49_[+1(1.55e-05)]_63 chr3L:17822992-17823112 4.29e-02 30_[+2(2.95e-05)]_82 chr3L:21151626-21151746 2.94e-02 120 chr2R:12687350-12687470 5.39e-03 71_[+2(2.95e-05)]_41 chr2R:24243538-24243658 9.60e-03 108_[+1(9.34e-05)]_4 chrX:3195998-3196118 4.78e-04 49_[+2(2.95e-05)]_63 chr2R:22264494-22264614 2.32e-01 120 chr3L:5448006-5448126 2.72e-03 7_[+3(5.79e-05)]_105 chr2L:15511763-15511883 1.01e-04 50_[+5(1.63e-05)]_62 chr3L:9643912-9644032 2.74e-03 20_[+1(3.14e-05)]_44_[+1(1.55e-05)]_\ 40 chr3R:27663013-27663133 7.43e-06 13_[+4(2.89e-05)]_47_[+1(1.55e-05)]_\ 44 chr3L:2282584-2282704 9.60e-04 16_[+2(2.95e-05)]_56_[+1(9.34e-05)]_\ 32 chr3L:10299515-10299635 2.17e-03 60_[+5(1.63e-05)]_52 chr3R:26682140-26682260 6.71e-04 62_[+2(4.46e-05)]_50 chr2R:15382439-15382559 5.27e-03 56_[+2(1.48e-05)]_56 chr3L:9917020-9917140 7.67e-04 54_[+2(2.95e-05)]_15_[+1(9.34e-05)]_\ 35 chr2L:14188294-14188414 1.22e-01 27_[+1(3.14e-05)]_85 chr3L:21186615-21186735 1.08e-01 62_[+1(3.14e-05)]_50 chr2L:16555155-16555275 3.76e-02 43_[+1(3.14e-05)]_69 chr2L:14244380-14244500 3.17e-02 57_[+2(4.46e-05)]_55 chr3R:5376735-5376855 4.78e-02 120 chr2L:7400463-7400583 4.52e-05 30_[+1(1.55e-05)]_47_[+2(1.48e-05)]_\ 27 chrX:1508574-1508694 7.04e-02 120 chr2L:7587268-7587388 1.62e-03 100_[+4(7.26e-05)]_12 chr3L:18863429-18863549 1.90e-02 41_[+2(1.48e-05)]_71 chr3R:5172106-5172226 1.97e-02 51_[+1(1.55e-05)]_61 chrX:1811298-1811418 3.73e-05 38_[+5(3.21e-05)]_10_[+2(1.48e-05)]_\ 56 chr2R:14377923-14378043 8.34e-05 37_[+1(1.55e-05)]_75 chr3L:9456528-9456648 2.75e-03 82_[+2(2.95e-05)]_30 chr2R:12072796-12072916 6.24e-02 44_[+2(5.90e-05)]_68 chr2R:13644323-13644443 1.44e-01 62_[+1(6.24e-05)]_50 chr3R:4319138-4319258 6.31e-06 19_[+4(1.45e-05)]_30_[+5(3.21e-05)]_\ 55 chr2R:10371611-10371731 6.11e-03 80_[+5(3.21e-05)]_32 chr2L:17560258-17560378 7.02e-02 120 chr2L:1693969-1694089 8.91e-02 82_[+1(1.55e-05)]_30 chr3L:5201513-5201633 3.89e-03 68_[+1(1.55e-05)]_44 chrX:2581932-2582052 1.10e-02 24_[+2(4.46e-05)]_88 chr3R:20946939-20947059 5.92e-05 18_[+3(5.79e-05)]_18_[+1(1.55e-05)]_\ 68 chr2L:6034513-6034633 3.40e-02 79_[+2(4.46e-05)]_33 chr3R:11695045-11695165 6.41e-02 120 chr3R:25612097-25612217 2.82e-02 120 chrX:10684702-10684822 6.13e-04 66_[+5(3.21e-05)]_46 chr3L:8285405-8285525 5.74e-04 72_[+5(3.21e-05)]_40 chr2R:16054194-16054314 1.23e-04 30_[+3(1.44e-05)]_8_[+2(4.46e-05)]_\ 66 chr3R:27888280-27888400 3.31e-02 66_[+1(1.55e-05)]_46 chrX:12085515-12085635 1.57e-05 22_[+4(1.45e-05)]_12_[+2(2.95e-05)]_\ 26_[+5(4.87e-05)]_36 chr2L:15011902-15012022 7.80e-03 62_[+5(3.21e-05)]_50 chr3R:6584636-6584756 2.24e-03 15_[+5(1.63e-05)]_38_[+1(1.55e-05)]_\ 51 chr3L:18968332-18968452 5.30e-03 1_[+4(2.89e-05)]_52_[+2(5.90e-05)]_\ 51 chr3L:4016298-4016418 2.87e-01 120 chr3R:24635113-24635233 2.00e-04 71_[+2(1.48e-05)]_41 chr2L:9321136-9321256 2.81e-04 24_[+3(2.91e-05)]_5_[+5(3.21e-05)]_\ 75 chr4:1052799-1052919 2.97e-02 60_[+1(3.14e-05)]_52 chrX:1476576-1476696 1.77e-03 40_[+1(1.55e-05)]_41_[+2(5.90e-05)]_\ 23 chr2L:2911064-2911184 2.94e-03 35_[+2(8.84e-05)]_77 chr2R:21252740-21252860 1.09e-02 72_[+1(1.55e-05)]_40 chr2L:5650699-5650819 1.42e-01 52_[+1(3.14e-05)]_60 chr3L:16257368-16257488 1.71e-03 86_[+1(1.55e-05)]_26 chr2L:2502266-2502386 2.43e-01 120 chr3L:3492229-3492349 2.54e-03 36_[+5(3.21e-05)]_76 chr2L:11082163-11082283 2.97e-04 63_[+1(1.55e-05)]_23_[+1(1.55e-05)]_\ 18 chrX:7156857-7156977 1.38e-05 31_[+5(3.21e-05)]_4_[+2(2.95e-05)]_\ 69 chr2R:13375000-13375120 6.83e-04 43_[+5(3.21e-05)]_69 chr2L:6899492-6899612 1.91e-03 27_[+2(2.95e-05)]_85 chrX:13763975-13764095 2.74e-02 120 chr2R:18551340-18551460 1.60e-02 88_[+1(6.24e-05)]_24 chr2R:24407998-24408118 6.15e-03 80_[+1(3.14e-05)]_32 chr2L:16135535-16135655 2.36e-04 31_[+2(2.95e-05)]_1_[+4(1.45e-05)]_\ 72 chr2R:19581121-19581241 4.25e-04 21_[+2(4.46e-05)]_31_[+4(4.34e-05)]_\ 52 chr3R:30559169-30559289 2.22e-02 51_[+1(6.24e-05)]_61 chrX:4053531-4053651 5.69e-02 74_[+1(6.24e-05)]_38 chr3R:5799545-5799665 1.03e-03 20_[+2(2.95e-05)]_92 chrX:11293926-11294046 1.94e-03 89_[+1(1.55e-05)]_23 chr3R:30560234-30560354 2.12e-03 51_[+1(9.34e-05)]_50_[+1(9.34e-05)]_\ 3 chr3R:26531642-26531762 1.22e-02 43_[+2(2.95e-05)]_69 chr3L:17942589-17942709 2.61e-02 72_[+1(4.69e-05)]_40 chr2R:19032740-19032860 2.42e-03 69_[+1(6.24e-05)]_43 chr2R:16071122-16071242 1.42e-04 48_[+2(2.95e-05)]_4_[+2(8.84e-05)]_\ 52 chr3L:15593548-15593668 2.86e-03 59_[+1(3.14e-05)]_39_[+5(3.21e-05)]_\ 6 chrX:3376515-3376635 1.26e-02 97_[+4(5.82e-05)]_15 chr3R:19407047-19407167 9.61e-03 120 chrX:6205089-6205209 1.13e-02 29_[+1(3.14e-05)]_83 chr3L:14189581-14189701 7.60e-05 74_[+1(1.55e-05)]_8_[+2(2.95e-05)]_\ 22 chr2L:2920793-2920913 2.20e-02 49_[+5(3.21e-05)]_18_[+5(6.53e-05)]_\ 37 chr3R:14876059-14876179 6.41e-03 [+5(3.21e-05)]_85_[+5(3.21e-05)]_19 chr2R:17873820-17873940 4.99e-05 [+2(4.46e-05)]_13_[+4(1.45e-05)]_4_\ [+4(1.45e-05)]_35_[+4(7.26e-05)]_36 chr3L:9905146-9905266 1.59e-02 47_[+2(8.84e-05)]_65 chr2R:16109229-16109349 6.03e-05 25_[+5(3.21e-05)]_15_[+3(1.44e-05)]_\ 64 chr2R:10266021-10266141 1.25e-03 76_[+1(3.14e-05)]_14_[+4(8.71e-05)]_\ [+4(1.45e-05)]_6 chrX:6081461-6081581 2.61e-04 82_[+1(1.55e-05)]_30 chr2L:20051338-20051458 5.96e-04 32_[+4(7.26e-05)]_34_[+1(1.55e-05)]_\ 38 chr3R:21043716-21043836 2.76e-03 88_[+1(1.55e-05)]_24 chr3R:18815154-18815274 4.03e-04 82_[+5(3.21e-05)]_30 chrX:20448062-20448182 6.96e-01 120 chr3R:18159560-18159680 7.77e-02 16_[+2(4.46e-05)]_96 chr3R:20982587-20982707 6.08e-04 67_[+5(3.21e-05)]_45 chr2R:16973759-16973879 3.68e-05 55_[+2(4.46e-05)]_57 chr3L:9770202-9770322 2.17e-02 68_[+2(1.48e-05)]_44 chr2L:11875085-11875205 4.75e-04 53_[+2(1.48e-05)]_59 chrX:1398130-1398250 7.90e-04 64_[+2(5.90e-05)]_48 chr3L:16301066-16301186 8.65e-03 86_[+2(1.48e-05)]_26 chr2L:14116111-14116231 4.74e-03 58_[+1(3.14e-05)]_54 chr2R:22088012-22088132 4.25e-01 120 chr2L:13066094-13066214 2.81e-02 120 chr2R:17890488-17890608 2.13e-01 37_[+2(5.90e-05)]_75 chr2L:2404510-2404630 1.41e-03 30_[+5(3.21e-05)]_43_[+1(1.55e-05)]_\ 31 chr3R:17506940-17507060 7.42e-03 120 chr2L:13459172-13459292 9.44e-01 120 chr2R:9376663-9376783 6.67e-06 18_[+5(3.21e-05)]_70_[+2(4.46e-05)]_\ 16 chr2L:1262817-1262937 1.22e-02 60_[+1(3.14e-05)]_52 chrX:3931070-3931190 1.91e-03 30_[+4(8.71e-05)]_41_[+4(1.45e-05)]_\ 3_[+4(1.45e-05)]_1_[+1(3.14e-05)]_13 chr3R:22389577-22389697 9.14e-03 4_[+2(2.95e-05)]_108 chr3R:24406479-24406599 7.00e-03 45_[+2(4.46e-05)]_67 chr2R:6799886-6800006 4.51e-03 7_[+1(4.69e-05)]_39_[+2(5.90e-05)]_\ 58 chr3R:20945653-20945773 1.33e-02 67_[+2(7.40e-05)]_45 chrX:9523175-9523295 8.05e-03 6_[+2(1.48e-05)]_106 chr3L:11938857-11938977 4.49e-03 77_[+3(1.44e-05)]_1_[+2(4.46e-05)]_\ 26 chr2L:1043338-1043458 5.98e-02 21_[+5(3.21e-05)]_71_[+5(3.21e-05)]_\ 12 chrX:7717038-7717158 9.59e-02 120 chr2R:9386827-9386947 8.76e-04 51_[+1(3.14e-05)]_61 chr3L:11740216-11740336 1.36e-01 49_[+1(6.24e-05)]_63 chr3R:21775951-21776071 5.26e-04 59_[+2(1.48e-05)]_24_[+1(9.34e-05)]_\ 21 chr2L:16543947-16544067 5.22e-03 45_[+2(7.40e-05)]_67 chr2R:13533020-13533140 2.60e-03 56_[+1(3.14e-05)]_6_[+1(6.24e-05)]_\ 3_[+3(5.79e-05)]_31 chr2L:5314769-5314889 3.16e-02 120 chr2L:1134622-1134742 1.35e-02 50_[+1(4.69e-05)]_62 chr2L:7593871-7593991 1.60e-02 46_[+2(1.48e-05)]_66 chr2L:7767568-7767688 2.07e-02 62_[+2(2.95e-05)]_8_[+2(4.46e-05)]_\ 34 chrX:18063530-18063650 2.36e-02 120 chr3R:13334182-13334302 2.73e-02 120 chr2L:918846-918966 4.51e-02 43_[+1(3.14e-05)]_69 chr2L:7460771-7460891 2.17e-03 59_[+2(2.95e-05)]_12_[+2(2.95e-05)]_\ 33 chr3L:19601851-19601971 1.47e-01 120 chr2L:14690318-14690438 8.45e-04 49_[+5(1.63e-05)]_63 chr2R:14559945-14560065 4.41e-02 58_[+2(1.48e-05)]_54 chrX:17704065-17704185 6.59e-02 120 chr2R:16917966-16918086 1.83e-01 120 chr2R:8013305-8013425 2.01e-05 5_[+4(5.82e-05)]_45_[+5(1.63e-05)]_\ 54 chr3L:2702600-2702720 6.88e-02 62_[+2(2.95e-05)]_50 chr3L:16555596-16555716 1.43e-04 35_[+4(8.71e-05)]_36_[+2(2.95e-05)]_\ 33 chr3L:9905921-9906041 1.28e-01 120 chr3L:2846657-2846777 2.51e-02 120 chr3R:22080355-22080475 2.01e-03 46_[+4(2.89e-05)]_33_[+2(2.95e-05)]_\ 25 chr3R:23666801-23666921 3.37e-04 39_[+2(1.48e-05)]_56_[+4(1.45e-05)]_\ 9 chr3R:26996770-26996890 8.05e-06 43_[+2(4.46e-05)]_35_[+4(1.45e-05)]_\ 2_[+4(4.34e-05)]_16 chr3R:10751196-10751316 5.28e-02 95_[+1(1.55e-05)]_17 chr3R:17198101-17198221 2.55e-02 91_[+1(1.55e-05)]_2_[+1(9.34e-05)]_\ 11 chr3R:25196996-25197116 1.69e-02 68_[+5(3.21e-05)]_44 chr2R:18830899-18831019 1.34e-02 54_[+2(1.48e-05)]_58 chr3R:6435268-6435388 2.85e-02 107_[+4(5.82e-05)]_5 chr3L:5011251-5011371 2.48e-02 85_[+1(1.55e-05)]_27 chr2R:23943689-23943809 4.14e-01 120 chr2L:13285925-13286045 9.05e-04 41_[+2(1.48e-05)]_71 chr3R:20376614-20376734 6.68e-02 40_[+2(4.46e-05)]_72 chr3L:8646943-8647063 1.20e-02 59_[+5(3.21e-05)]_53 chr3L:7313698-7313818 1.39e-01 120 chr3L:10290515-10290635 4.53e-03 75_[+1(9.34e-05)]_37 chr3R:6940237-6940357 6.15e-02 57_[+1(1.55e-05)]_55 chr3L:17180592-17180712 1.11e-03 120 chrX:2636961-2637081 4.94e-03 55_[+3(1.44e-05)]_57 chrX:9656011-9656131 7.23e-02 47_[+2(5.90e-05)]_65 chr3L:5907210-5907330 2.55e-02 32_[+1(1.55e-05)]_80 chr2R:12701982-12702102 3.85e-01 120 chr3L:2849759-2849879 6.79e-03 53_[+1(1.55e-05)]_59 chrX:15538148-15538268 2.99e-03 76_[+5(3.21e-05)]_36 chr3L:20885333-20885453 3.25e-01 120 chr2L:6055283-6055403 6.25e-03 120 chr3R:30415029-30415149 3.23e-03 69_[+1(3.14e-05)]_43 chr3R:18316335-18316455 1.03e-03 68_[+5(1.63e-05)]_6_[+2(4.46e-05)]_\ 30 chr2R:13106149-13106269 4.54e-03 29_[+2(4.46e-05)]_83 chr2R:11846706-11846826 4.48e-02 40_[+2(2.95e-05)]_72 chr2L:16689789-16689909 3.81e-05 57_[+1(6.24e-05)]_11_[+3(5.79e-05)]_\ 36 chr2L:1836259-1836379 4.39e-03 120 chr2L:19917147-19917267 1.90e-04 69_[+5(1.63e-05)]_43 chr2L:17580567-17580687 4.90e-02 48_[+1(1.55e-05)]_64 chr3L:20410463-20410583 4.90e-02 70_[+1(3.14e-05)]_42 chr3L:4007288-4007408 8.27e-06 4_[+5(4.87e-05)]_27_[+2(8.84e-05)]_\ 46_[+4(8.71e-05)]_19 chrX:12835664-12835784 6.45e-04 71_[+1(4.69e-05)]_8_[+2(4.46e-05)]_\ 25 chr2R:16259939-16260059 7.60e-03 82_[+1(1.55e-05)]_30 chr3R:26862358-26862478 2.60e-02 49_[+2(2.95e-05)]_63 chr3L:15034816-15034936 2.91e-03 39_[+1(3.14e-05)]_21_[+5(3.21e-05)]_\ 44 chrX:9282412-9282532 3.66e-02 14_[+2(1.48e-05)]_98 chr3R:17862515-17862635 4.44e-01 120 chr3R:27661562-27661682 4.01e-02 46_[+1(1.55e-05)]_66 chr3L:20036780-20036900 2.03e-02 38_[+1(9.34e-05)]_20_[+1(1.55e-05)]_\ 46 chr2L:21331661-21331781 4.74e-03 24_[+5(1.63e-05)]_88 chr3R:26667995-26668115 1.24e-02 68_[+1(3.14e-05)]_44 chr2R:6050683-6050803 1.29e-02 120 chr2L:14103572-14103692 1.73e-03 8_[+2(5.90e-05)]_68_[+4(2.89e-05)]_\ 28 chr2R:19554208-19554328 1.77e-03 82_[+5(3.21e-05)]_30 chr3L:7313897-7314017 8.92e-04 2_[+4(7.26e-05)]_110 chr2L:22153349-22153469 1.16e-02 24_[+5(3.21e-05)]_88 chr2R:7543436-7543556 9.09e-02 81_[+2(5.90e-05)]_31 chr2R:9923162-9923282 7.35e-01 120 chr3R:16606086-16606206 3.43e-02 55_[+1(1.55e-05)]_57 chr2L:4859121-4859241 1.00e-01 92_[+1(6.24e-05)]_20 chrX:13012400-13012520 3.49e-03 34_[+2(5.90e-05)]_78 chr3L:2256875-2256995 8.12e-01 120 chr3L:21193952-21194072 4.28e-01 120 chr3L:21330854-21330974 2.29e-02 81_[+1(3.14e-05)]_31 chr3L:884205-884325 6.34e-03 66_[+5(4.87e-05)]_6_[+1(3.14e-05)]_\ 32 chr3R:21967984-21968104 1.88e-06 11_[+1(3.14e-05)]_32_[+2(2.95e-05)]_\ 17_[+3(1.44e-05)]_36 chr3R:26606599-26606719 3.80e-04 19_[+5(3.21e-05)]_58_[+1(4.69e-05)]_\ 27 chr3L:1629203-1629323 6.08e-04 8_[+2(4.46e-05)]_43_[+4(4.34e-05)]_\ 53 chr2R:9351825-9351945 1.17e-04 120 chr2R:24222052-24222172 7.90e-02 120 chr3R:12021105-12021225 4.46e-03 43_[+2(4.46e-05)]_69 chr2L:19998797-19998917 1.64e-03 34_[+5(1.63e-05)]_14_[+1(3.14e-05)]_\ 56 chr3R:31351081-31351201 3.55e-04 7_[+4(4.34e-05)]_34_[+2(4.46e-05)]_\ 63 chrX:17656625-17656745 5.13e-02 5_[+1(3.14e-05)]_107 chr2R:10087509-10087629 9.52e-01 120 chr2R:13536660-13536780 2.14e-04 82_[+5(1.63e-05)]_30 chr2L:13046003-13046123 2.78e-03 11_[+4(2.89e-05)]_13_[+2(2.95e-05)]_\ 80 chr3R:25199723-25199843 1.84e-04 18_[+5(6.53e-05)]_18_[+5(1.63e-05)]_\ 68 chr2R:10682068-10682188 8.06e-01 120 chr3R:14214906-14215026 1.25e-05 106_[+1(1.55e-05)]_6 chr3R:22260806-22260926 1.35e-03 45_[+2(4.46e-05)]_67 chrX:18221000-18221120 8.47e-03 43_[+2(1.48e-05)]_69 chr3R:7028707-7028827 9.22e-04 36_[+5(3.21e-05)]_55_[+1(4.69e-05)]_\ 13 chr3R:26122630-26122750 6.62e-01 120 chrX:1754310-1754430 9.08e-04 82_[+3(1.44e-05)]_30 chr2L:19985777-19985897 5.91e-02 15_[+2(2.95e-05)]_97 chr3L:4969439-4969559 8.93e-03 33_[+1(9.34e-05)]_79 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n05.farnam.hpc.yale.internal ********************************************************************************