******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/pfk.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:17963147-17963267 1.0000 120 chr3R:18706428-18706548 1.0000 120 chrX:16874828-16874948 1.0000 120 chr3R:20728081-20728201 1.0000 120 chrX:5365148-5365268 1.0000 120 chr3L:17535875-17535995 1.0000 120 chrX:19429388-19429508 1.0000 120 chrX:3159776-3159896 1.0000 120 chr2R:10021234-10021354 1.0000 120 chrX:2651298-2651418 1.0000 120 chr3R:9185237-9185357 1.0000 120 chrX:4434634-4434754 1.0000 120 chr2L:9256455-9256575 1.0000 120 chrX:1640129-1640249 1.0000 120 chr3R:4870323-4870443 1.0000 120 chrX:17967185-17967305 1.0000 120 chrX:14338311-14338431 1.0000 120 chrX:6709372-6709492 1.0000 120 chr2R:13910326-13910446 1.0000 120 chrX:12675977-12676097 1.0000 120 chr3R:29345967-29346087 1.0000 120 chr3R:10167388-10167508 1.0000 120 chr2R:9387488-9387608 1.0000 120 chrX:3545182-3545302 1.0000 120 chr2R:24304660-24304780 1.0000 120 chrX:4273638-4273758 1.0000 120 chrX:17799594-17799714 1.0000 120 chr2L:16148591-16148711 1.0000 120 chrX:13138005-13138125 1.0000 120 chrX:7316354-7316474 1.0000 120 chr2L:4075768-4075888 1.0000 120 chr3R:20080311-20080431 1.0000 120 chr2R:13908768-13908888 1.0000 120 chr2L:3018300-3018420 1.0000 120 chr3L:3823103-3823223 1.0000 120 chr2R:15198768-15198888 1.0000 120 chrX:10387072-10387192 1.0000 120 chrX:3995306-3995426 1.0000 120 chr2L:19159969-19160089 1.0000 120 chrX:873590-873710 1.0000 120 chrX:5744613-5744733 1.0000 120 chrX:21265367-21265487 1.0000 120 chrX:10791128-10791248 1.0000 120 chrX:10257342-10257462 1.0000 120 chr3R:18850194-18850314 1.0000 120 chr3R:20574187-20574307 1.0000 120 chr2L:1529623-1529743 1.0000 120 chrX:10290766-10290886 1.0000 120 chrX:1395388-1395508 1.0000 120 chrX:18248383-18248503 1.0000 120 chrX:3139250-3139370 1.0000 120 chr3R:4840887-4841007 1.0000 120 chr2L:8633793-8633913 1.0000 120 chrX:2649806-2649926 1.0000 120 chr3L:20767392-20767512 1.0000 120 chr3R:12857693-12857813 1.0000 120 chr2L:20534993-20535113 1.0000 120 chr3R:17763737-17763857 1.0000 120 chrX:8046646-8046766 1.0000 120 chrX:11695925-11696045 1.0000 120 chrX:18812257-18812377 1.0000 120 chrX:10790576-10790696 1.0000 120 chrX:11640592-11640712 1.0000 120 chr2L:17165905-17166025 1.0000 120 chrX:7823081-7823201 1.0000 120 chr2L:13813143-13813263 1.0000 120 chrX:2650829-2650949 1.0000 120 chr3L:13884792-13884912 1.0000 120 chr3L:17183963-17184083 1.0000 120 chrX:1945352-1945472 1.0000 120 chr3R:17063721-17063841 1.0000 120 chr2L:219754-219874 1.0000 120 chr3R:28735659-28735779 1.0000 120 chrX:13248668-13248788 1.0000 120 chrX:17968248-17968368 1.0000 120 chr3L:4619592-4619712 1.0000 120 chr2R:10249122-10249242 1.0000 120 chrX:19432137-19432257 1.0000 120 chr3R:21642452-21642572 1.0000 120 chrX:1483782-1483902 1.0000 120 chrX:8108041-8108161 1.0000 120 chrX:10290120-10290240 1.0000 120 chr2L:7675211-7675331 1.0000 120 chrX:17772815-17772935 1.0000 120 chr2R:13911054-13911174 1.0000 120 chrX:6979924-6980044 1.0000 120 chrX:12213067-12213187 1.0000 120 chrX:17995642-17995762 1.0000 120 chrX:21582217-21582337 1.0000 120 chrX:8080755-8080875 1.0000 120 chrX:11981741-11981861 1.0000 120 chrX:6987190-6987310 1.0000 120 chr3L:3942796-3942916 1.0000 120 chr2R:13342928-13343048 1.0000 120 chr3L:13803390-13803510 1.0000 120 chrX:21253358-21253478 1.0000 120 chrX:18276030-18276150 1.0000 120 chr2R:18498608-18498728 1.0000 120 chrX:17733983-17734103 1.0000 120 chrX:8624095-8624215 1.0000 120 chr2L:6656313-6656433 1.0000 120 chr3R:13984592-13984712 1.0000 120 chr3L:14600689-14600809 1.0000 120 chr3R:28417970-28418090 1.0000 120 chr2R:7431904-7432024 1.0000 120 chr2L:20733164-20733284 1.0000 120 chr3L:2952858-2952978 1.0000 120 chrX:16876574-16876694 1.0000 120 chr2R:15164843-15164963 1.0000 120 chr2R:10383581-10383701 1.0000 120 chrX:8140846-8140966 1.0000 120 chrX:6725295-6725415 1.0000 120 chrX:2656153-2656273 1.0000 120 chrX:14892190-14892310 1.0000 120 chr3R:12021146-12021266 1.0000 120 chrX:4284262-4284382 1.0000 120 chrX:22802715-22802835 1.0000 120 chr2L:483437-483557 1.0000 120 chr3L:12687508-12687628 1.0000 120 chr3R:4856758-4856878 1.0000 120 chrX:2278912-2279032 1.0000 120 chr3L:71430-71550 1.0000 120 chr3R:18573017-18573137 1.0000 120 chr3L:19237915-19238035 1.0000 120 chr2L:17102581-17102701 1.0000 120 chr3R:28990237-28990357 1.0000 120 chrX:21437374-21437494 1.0000 120 chrX:10631300-10631420 1.0000 120 chr3R:15434813-15434933 1.0000 120 chr3R:8529221-8529341 1.0000 120 chr2L:16275275-16275395 1.0000 120 chrX:12670593-12670713 1.0000 120 chrX:7959686-7959806 1.0000 120 chrX:17994596-17994716 1.0000 120 chr2R:24455150-24455270 1.0000 120 chr3R:21088686-21088806 1.0000 120 chrX:4795287-4795407 1.0000 120 chr3R:20714553-20714673 1.0000 120 chr3R:29559555-29559675 1.0000 120 chr3L:17976464-17976584 1.0000 120 chr3R:23147004-23147124 1.0000 120 chrX:15191560-15191680 1.0000 120 chr3R:19891432-19891552 1.0000 120 chr3R:18699339-18699459 1.0000 120 chr3R:15435014-15435134 1.0000 120 chr2R:6602539-6602659 1.0000 120 chr3L:1478925-1479045 1.0000 120 chrX:6727282-6727402 1.0000 120 chr3L:5079180-5079300 1.0000 120 chr3R:16413899-16414019 1.0000 120 chrX:15769589-15769709 1.0000 120 chrX:1483583-1483703 1.0000 120 chr3L:11132211-11132331 1.0000 120 chrX:5175101-5175221 1.0000 120 chr3L:13840899-13841019 1.0000 120 chr3L:73491-73611 1.0000 120 chr2L:19141305-19141425 1.0000 120 chr3L:11135023-11135143 1.0000 120 chrX:3453186-3453306 1.0000 120 chr3R:22998405-22998525 1.0000 120 chrX:9310374-9310494 1.0000 120 chr2R:10844007-10844127 1.0000 120 chr3R:31605185-31605305 1.0000 120 chr3R:4865384-4865504 1.0000 120 chr2L:10209072-10209192 1.0000 120 chr3R:14329303-14329423 1.0000 120 chr2L:18314450-18314570 1.0000 120 chr3L:1097675-1097795 1.0000 120 chr2R:24975331-24975451 1.0000 120 chr2L:3648575-3648695 1.0000 120 chrX:12392170-12392290 1.0000 120 chr3L:18621744-18621864 1.0000 120 chrX:18083980-18084100 1.0000 120 chr3L:20796943-20797063 1.0000 120 chr2R:11999214-11999334 1.0000 120 chr2R:23754309-23754429 1.0000 120 chr2L:9275607-9275727 1.0000 120 chr3R:28348563-28348683 1.0000 120 chr2L:10372411-10372531 1.0000 120 chrX:15189655-15189775 1.0000 120 chr3L:17513642-17513762 1.0000 120 chrX:10865699-10865819 1.0000 120 chr3L:22199070-22199190 1.0000 120 chr3R:8914023-8914143 1.0000 120 chr3L:23206566-23206686 1.0000 120 chr2L:15332681-15332801 1.0000 120 chr3R:24065905-24066025 1.0000 120 chr2R:5360111-5360231 1.0000 120 chrX:11822032-11822152 1.0000 120 chr3R:27280798-27280918 1.0000 120 chr2L:10333239-10333359 1.0000 120 chr3L:641507-641627 1.0000 120 chr2L:20991188-20991308 1.0000 120 chrX:1234806-1234926 1.0000 120 chr3L:10525677-10525797 1.0000 120 chrX:15464716-15464836 1.0000 120 chr3R:26552293-26552413 1.0000 120 chr3R:16585160-16585280 1.0000 120 chr2R:23819364-23819484 1.0000 120 chr2L:17130868-17130988 1.0000 120 chrX:12297493-12297613 1.0000 120 chr2L:19137792-19137912 1.0000 120 chr2R:19415146-19415266 1.0000 120 chr2R:5709734-5709854 1.0000 120 chr2R:5715413-5715533 1.0000 120 chr3R:19997515-19997635 1.0000 120 chrX:1281261-1281381 1.0000 120 chrX:18137896-18138016 1.0000 120 chr3L:1940212-1940332 1.0000 120 chr2L:16972807-16972927 1.0000 120 chrX:1566858-1566978 1.0000 120 chrX:19021146-19021266 1.0000 120 chrX:3465715-3465835 1.0000 120 chr4:1234882-1235002 1.0000 120 chr2R:24802602-24802722 1.0000 120 chr3R:8118246-8118366 1.0000 120 chr2L:3646215-3646335 1.0000 120 chr3L:19235425-19235545 1.0000 120 chr3L:1538724-1538844 1.0000 120 chr2R:12263394-12263514 1.0000 120 chrX:11386818-11386938 1.0000 120 chrX:4707329-4707449 1.0000 120 chr3R:29069330-29069450 1.0000 120 chrX:15355538-15355658 1.0000 120 chr2R:12755779-12755899 1.0000 120 chr2L:13227019-13227139 1.0000 120 chrX:15298061-15298181 1.0000 120 chr3L:20310461-20310581 1.0000 120 chr3R:24893935-24894055 1.0000 120 chr3R:15588999-15589119 1.0000 120 chrX:18137693-18137813 1.0000 120 chr3L:10288286-10288406 1.0000 120 chr2R:4225051-4225171 1.0000 120 chr2L:19163296-19163416 1.0000 120 chrX:3453725-3453845 1.0000 120 chr3L:20203740-20203860 1.0000 120 chr2L:12174663-12174783 1.0000 120 chrX:6979331-6979451 1.0000 120 chr2R:4547361-4547481 1.0000 120 chrX:19151964-19152084 1.0000 120 chr3R:17646804-17646924 1.0000 120 chr2R:24255322-24255442 1.0000 120 chrX:656606-656726 1.0000 120 chr3L:18866044-18866164 1.0000 120 chr3R:23057432-23057552 1.0000 120 chr2R:10125571-10125691 1.0000 120 chr2L:19136443-19136563 1.0000 120 chr2R:24277171-24277291 1.0000 120 chr2L:10231630-10231750 1.0000 120 chr2L:16279006-16279126 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_pfk/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/pfk.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.258 C 0.239 G 0.233 T 0.269 Background letter frequencies (from file dataset with add-one prior applied): A 0.258 C 0.239 G 0.233 T 0.269 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GRAACGRA MEME-1 width = 8 sites = 124 llr = 973 E-value = 2.2e-072 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 Description -------------------------------------------------------------------------------- Simplified A :4aa:148 pos.-specific C ::::8:1: probability G a6:::961 matrix T ::::2::1 bits 2.1 1.9 * ** 1.7 * ** 1.5 * ** * Relative 1.3 * **** Entropy 1.1 ****** * (11.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGAACGGA consensus A T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:15355538-15355658 46 1.21e-05 GAAGCGAAAT ggaacgga tacggatatg chr3R:8118246-8118366 85 1.21e-05 ggaacagaac ggaacgga acggGGACGG chr2R:24802602-24802722 49 1.21e-05 CAGGGCCGTC GGAACGGA AAGGGGCAAC chr3L:23206566-23206686 70 1.21e-05 CCATGGGGCT GGAACGGA ATGGGGAGGA chrX:18083980-18084100 81 1.21e-05 AGACATCGCC GGAACGGA ACACATcgac chr2L:10209072-10209192 57 1.21e-05 CTCTATATGT GGAACGGA ATGGTTCTCG chr3R:22998405-22998525 8 1.21e-05 TATGCAG GGAACGGA ACACGCGCGA chr3L:5079180-5079300 102 1.21e-05 TTGCCACACT GGAACGGA AAAGCTAAAA chr3R:23147004-23147124 81 1.21e-05 ggatcggatc ggaacgga AAGACTCGAG chrX:4795287-4795407 74 1.21e-05 CAaacggaat ggaacgga acagaacaga chr2R:24455150-24455270 96 1.21e-05 ATGCTGGGAA GGAACGGA CCAACAGTCT chrX:7959686-7959806 56 1.21e-05 GACCAAAAAC GGAACGGA GCGAAGCAAA chrX:2278912-2279032 72 1.21e-05 TGCAGTCAAC GGAACGGA ACAGTTTCGA chr2L:483437-483557 41 1.21e-05 GGAACAGAAT GGAACGGA ACGCGGAGAA chr2R:7431904-7432024 81 1.21e-05 ggtttggaac ggaacgga gcggatcgga chrX:18276030-18276150 61 1.21e-05 ggaacaaaac ggaacgga atggatcgtt chrX:21582217-21582337 58 1.21e-05 tgggacgcgg ggaacgga aacggaaacg chr3L:4619592-4619712 46 1.21e-05 CCGAGGGAAC GGAACGGA AGGCCGGAAC chr3R:17063721-17063841 69 1.21e-05 GGAACGAAAC GGAACGGA GTAGGATGTA chr3L:13884792-13884912 20 1.21e-05 GTTGGCgaac ggaacgga atggtacgga chrX:7823081-7823201 60 1.21e-05 ggaacagaat ggaacgga tactccggcg chrX:10290766-10290886 53 1.21e-05 ggcaacaggc ggaacgga acgaaatggt chr2L:1529623-1529743 81 1.21e-05 TTGACAGGGC GGAACGGA AGGGAAACCG chrX:10257342-10257462 84 1.21e-05 aacaaccaac ggaacgga acagcggaat chrX:21265367-21265487 65 1.21e-05 CAGGGACAGA ggaacgga acgaaacgga chrX:10387072-10387192 63 1.21e-05 ACGAAGGAAT GGAACGGA ATCACATGAG chrX:4273638-4273758 63 1.21e-05 aaaatggaac ggaacgga gtggaatgaa chr2R:9387488-9387608 44 1.21e-05 TGGAATGGAG GGAACGGA ACGAGCGGAG chrX:14338311-14338431 49 1.21e-05 GGGGGCGGAA ggaacgga acgaaacgaa chrX:11822032-11822152 73 2.55e-05 GAGACAAAGG GAAACGGA ACGAAATGGA chr2R:23754309-23754429 59 2.55e-05 atgcggtaac gaaacgga agcgAGGAAG chrX:6987190-6987310 50 2.55e-05 AAACCGGATG GAAACGGA TCGACAACTC chrX:17968248-17968368 1 2.55e-05 . GAAACGGA ACACGGTCAA chr2L:17165905-17166025 58 2.55e-05 TGGACGGAAT GAAACGGA GCATGAAGTG chrX:11695925-11696045 53 2.55e-05 gaactaaact gaaacgga acgaagcgaa chrX:2651298-2651418 81 2.55e-05 ACAACAATGT GAAACGGA ACACGAAACG chr3L:17535875-17535995 66 2.55e-05 TGATGGCAAG GAAACGGA GAAAGGGCAG chr3R:18706428-18706548 90 2.55e-05 ATGGGAAaac gaaacgga acgtaacgga chrX:17963147-17963267 92 2.55e-05 GGCACGCACC GAAACGGA CAGCGAGGCG chrX:3453725-3453845 58 3.89e-05 GAAATGGCAT GGAACGAA ACGAAATCAC chrX:15189655-15189775 36 3.89e-05 CAAGCCaaat ggaacgaa acgaaacaga chr3R:20714553-20714673 64 3.89e-05 TGTTCGTTCC ggaacgaa tggaaagatg chr3L:13803390-13803510 63 3.89e-05 AGGCGGCTGC GGAACGAA TGGAAATGGA chr3R:21642452-21642572 70 3.89e-05 GTAGGAAAGT GGAACGAA CCAGGGGTGG chrX:873590-873710 92 3.89e-05 GGCAAGGAGA GGAACGAA GAGCCCGCAC chr3R:19997515-19997635 22 5.37e-05 TAAGcgaaac gaaacgaa acgaaacgaa chr2R:10844007-10844127 61 5.37e-05 aaatgaaaat gaaacgaa aatgggaatg chr3L:11132211-11132331 63 5.37e-05 CCAGGCAGTC GAAACGAA AGCCGCGATG chrX:12670593-12670713 33 5.37e-05 GCTTGGCAAT GAAACGAA ACGAAACTGG chrX:21437374-21437494 15 5.37e-05 TTGTGCGGAC GAAACGAA ACGGGTTTCG chr3R:12021146-12021266 111 5.37e-05 AGCGAAATTT GAAACGAA CT chrX:16876574-16876694 94 5.37e-05 CAAGTTGGTG GAAACGAA ACGCGGCCCA chr3R:23057432-23057552 65 6.73e-05 GGCTACAAGT GGAATGGA ATGCTATGAT chr3R:24893935-24894055 87 6.73e-05 TATACCCAAA GGAATGGA ACGTGGACCG chrX:4707329-4707449 4 6.73e-05 CAC GGAATGGA ACACCATCGT chr3R:8914023-8914143 70 6.73e-05 GAAATGGAAT GGAATGGA ATGGTGAGGA chr3L:73491-73611 37 6.73e-05 CTGGGAACGT GGAATGGA GCACAGGCGC chrX:3995306-3995426 63 6.73e-05 TGTGGAACAT GGAATGGA ATGAAATGAT chrX:12675977-12676097 78 6.73e-05 TTTCTGGAAT GGAATGGA ATTACTTATG chrX:4434634-4434754 62 6.73e-05 TGGGCACAGT GGAATGGA ACATCGGAAC chrX:16874828-16874948 51 6.73e-05 GGCACGATGT GGAATGGA ATGGCGGAAC chr2L:10231630-10231750 109 8.24e-05 TTGAAACGCG GAAATGGA ACAA chr4:1234882-1235002 76 8.24e-05 GAAACAGTCG GAAATGGA AATAAGGAAC chr3L:17976464-17976584 32 8.24e-05 ggtatggaat gaaatgga aGACACCTGT chr3R:28735659-28735779 65 8.24e-05 AAGGATGGCC GAAATGGA AACGGGACTG chr2L:19136443-19136563 39 1.08e-04 acgagaacaa ggaacaga cgggaacacg chr3L:19235425-19235545 98 1.08e-04 TTTGGTAAAC GGAACAGA GCTACGTGAA chr3R:21088686-21088806 17 1.19e-04 AAGCGAGAAC GGAACGGG AATAAGTTAC chrX:8140846-8140966 3 1.19e-04 ct ggaacggg actgggaagt chrX:8108041-8108161 83 1.19e-04 AACACGGGAC GGAACGGG ACGCGCACTC chr2R:5715413-5715533 44 1.34e-04 CGAAGCCGCC GGAATGAA GCGAAATGAA chr3L:14600689-14600809 44 1.34e-04 AGATCTCATA GGAATGAA ATGGGATGTG chr2L:10333239-10333359 48 1.63e-04 AAAAAGCACG GAAACGGT AAAAATTGTT chr2L:15332681-15332801 55 1.63e-04 TTTCGAGAGC GAAACAGA AACAAAGTGG chrX:11981741-11981861 61 1.63e-04 GGTGAGTTGT GAAACGGT GAGATTCTGA chrX:5744613-5744733 105 1.63e-04 GGTaacgaac gaaacaga acagaaca chrX:17799594-17799714 9 1.63e-04 TTTATATT GAAACAGa ttgccctgcc chr2R:13910326-13910446 96 1.75e-04 aaacgagatg gaaacGGG AAAgggggta chr2L:16275275-16275395 71 2.04e-04 AACAACTCTG GAAATGAA ATGGCAATGA chrX:2656153-2656273 101 2.04e-04 CTGTGGAATC GGAACGCA TTCGATGTAT chr3L:2952858-2952978 102 2.04e-04 AATTGGATTG GAAATGAA AATTTTATGT chr2R:10249122-10249242 41 2.04e-04 TCGAATGAGT GGAACGCA TGCGTGGACT chrX:18812257-18812377 83 2.04e-04 TGAAACGTCG GAAATGAA ACAACGAGTG chr3R:12857693-12857813 66 2.04e-04 GGAACGAGTG GAAATGAA ATATGAGCTT chr3R:10167388-10167508 76 2.04e-04 CTCTTCACCT GAAATGAA ATGAGATAGA chr3R:28348563-28348683 60 2.33e-04 ATGCTGCGGA GGAACGAT GGCATTGGAA chr3L:20796943-20797063 105 2.33e-04 AACGGTCAAC GGAACAAA ATTGAAAT chr3L:13840899-13841019 41 2.33e-04 GAGCTACTTT GGAACGAT ATGGAAAAGA chr2L:13813143-13813263 26 2.33e-04 ATAGTGAGCT GGAACGAT TGGAGGTATG chr2R:13908768-13908888 66 2.33e-04 AATGGGGAGA GGAACGAT ATGGTAGTGG chr2R:6602539-6602659 101 2.45e-04 TCCAATTCGA GGAACGAG AATTGTGGAA chr3R:28990237-28990357 64 2.45e-04 AAGAGAGAGC GGAACGAG TGACAGTGAA chrX:13248668-13248788 106 2.45e-04 GACAGCCAAC GGAACGAG AAGTGAA chr3L:3823103-3823223 93 2.59e-04 CGCATTCGGG GAAACGCA TTTTGCACAG chr2R:10125571-10125691 61 2.91e-04 TAAATCGTGT GAAACAAA CTAAAGTCGC chr3R:17646804-17646924 14 2.91e-04 ATCACTACCT GAAACGAT TTGGGATGGA chr2L:16972807-16972927 6 2.91e-04 GAATT GAAACAAA CCAATCTCTC chr3L:1940212-1940332 23 2.91e-04 GTTTAGGCCC GAAACGat cccatcccat chr2L:18314450-18314570 82 2.91e-04 TCTGTTATCT GAAACAAA TGGTAGTGAA chr3R:18573017-18573137 72 2.91e-04 AGGGAACACC GAAACGAT GAGAACGGAT chrX:21253358-21253478 10 2.91e-04 AGACACAGT GAAACAAA CAGTGAAACA chr2R:13911054-13911174 26 2.91e-04 AAGCGAAGCT GAAACAAA GTGGAATTGG chr3R:17763737-17763857 100 2.91e-04 CAGCTGAAGT GAAACAAA GAAGCGCCAT chr3R:20728081-20728201 80 2.91e-04 TGGTGGCAGG GAAACGAT GGGAACTGAA chr2L:19159969-19160089 106 3.18e-04 GGATACGAGC AGAACGGA AAGACGA chr3R:15588999-15589119 112 3.74e-04 gtatggtGGG GGAATGGG T chrX:6979924-6980044 97 3.74e-04 AGGGATACCG GGAATGGG AAAGAGCGAA chrX:17772815-17772935 45 3.74e-04 TTCCGCCTTC AAAACGGA AGTTGGCCCA chrX:13138005-13138125 102 3.74e-04 AGCTGGAATT GGAATGGG ACTGGAAGCA chr2L:17130868-17130988 23 4.07e-04 GAAACAATTG GAAATGGT ACAAACAAGC chr3R:15435014-15435134 83 4.07e-04 CACCAAAGCC GAAATGGT TAATTATTTA chr3R:13984592-13984712 15 4.49e-04 TTTTCCCACA GGAACAGT TGACATTGGA chrX:10290120-10290240 25 4.49e-04 AGGCGAAAAC AGAACGAA CCGAATGCGG chrX:18137896-18138016 49 5.53e-04 TTAATTTACA GAAACAGT TTTTGAGAAA chr2R:19415146-19415266 29 5.53e-04 ATAATCGCAT AAAACGAA AGAAAATGTT chr3R:27280798-27280918 11 5.53e-04 GCTAACGTAA AAAACGAA CTCTCCCGCA chr2R:24304660-24304780 73 5.53e-04 TAGGAGCTCC AAAACGAA GGAAAAACAC chr2R:5360111-5360231 31 5.82e-04 CGCCAACGCA GAAACAGG AAACTTAGTT chr3R:4870323-4870443 82 5.82e-04 CGCTTTGAGT GAAATGCA AATGAAGTTC chr2L:13227019-13227139 17 6.44e-04 AAGCCCACCT GAAATAAA TCCGCTTAGG chrX:1281261-1281381 70 6.44e-04 ACGGCGGGAA GGAACACA GCGCCGTCGA chr3R:28417970-28418090 15 6.44e-04 CTTATCAGGC GGAACGCT TTGGACTTGG chrX:6727282-6727402 4 6.86e-04 AGT GGAACGCG GCTTATCACC chr3L:20767392-20767512 32 6.86e-04 ACACCAAATT GGAACAAT GATCAAAAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:15355538-15355658 1.2e-05 45_[+1]_67 chr3R:8118246-8118366 1.2e-05 84_[+1]_28 chr2R:24802602-24802722 1.2e-05 48_[+1]_64 chr3L:23206566-23206686 1.2e-05 69_[+1]_43 chrX:18083980-18084100 1.2e-05 80_[+1]_32 chr2L:10209072-10209192 1.2e-05 56_[+1]_56 chr3R:22998405-22998525 1.2e-05 7_[+1]_105 chr3L:5079180-5079300 1.2e-05 101_[+1]_11 chr3R:23147004-23147124 1.2e-05 80_[+1]_32 chrX:4795287-4795407 1.2e-05 73_[+1]_39 chr2R:24455150-24455270 1.2e-05 95_[+1]_17 chrX:7959686-7959806 1.2e-05 55_[+1]_57 chrX:2278912-2279032 1.2e-05 71_[+1]_41 chr2L:483437-483557 1.2e-05 40_[+1]_72 chr2R:7431904-7432024 1.2e-05 80_[+1]_32 chrX:18276030-18276150 1.2e-05 60_[+1]_52 chrX:21582217-21582337 1.2e-05 57_[+1]_55 chr3L:4619592-4619712 1.2e-05 45_[+1]_67 chr3R:17063721-17063841 1.2e-05 68_[+1]_44 chr3L:13884792-13884912 1.2e-05 19_[+1]_93 chrX:7823081-7823201 1.2e-05 59_[+1]_53 chrX:10290766-10290886 1.2e-05 52_[+1]_60 chr2L:1529623-1529743 1.2e-05 80_[+1]_32 chrX:10257342-10257462 1.2e-05 83_[+1]_29 chrX:21265367-21265487 1.2e-05 64_[+1]_48 chrX:10387072-10387192 1.2e-05 62_[+1]_50 chrX:4273638-4273758 1.2e-05 62_[+1]_50 chr2R:9387488-9387608 1.2e-05 43_[+1]_69 chrX:14338311-14338431 1.2e-05 48_[+1]_64 chrX:11822032-11822152 2.5e-05 72_[+1]_40 chr2R:23754309-23754429 2.5e-05 58_[+1]_54 chrX:6987190-6987310 2.5e-05 49_[+1]_63 chrX:17968248-17968368 2.5e-05 [+1]_112 chr2L:17165905-17166025 2.5e-05 57_[+1]_55 chrX:11695925-11696045 2.5e-05 52_[+1]_60 chrX:2651298-2651418 2.5e-05 80_[+1]_32 chr3L:17535875-17535995 2.5e-05 65_[+1]_47 chr3R:18706428-18706548 2.5e-05 89_[+1]_23 chrX:17963147-17963267 2.5e-05 91_[+1]_21 chrX:3453725-3453845 3.9e-05 57_[+1]_55 chrX:15189655-15189775 3.9e-05 35_[+1]_77 chr3R:20714553-20714673 3.9e-05 63_[+1]_49 chr3L:13803390-13803510 3.9e-05 62_[+1]_50 chr3R:21642452-21642572 3.9e-05 69_[+1]_43 chrX:873590-873710 3.9e-05 91_[+1]_21 chr3R:19997515-19997635 5.4e-05 21_[+1]_91 chr2R:10844007-10844127 5.4e-05 60_[+1]_52 chr3L:11132211-11132331 5.4e-05 62_[+1]_50 chrX:12670593-12670713 5.4e-05 32_[+1]_80 chrX:21437374-21437494 5.4e-05 14_[+1]_98 chr3R:12021146-12021266 5.4e-05 110_[+1]_2 chrX:16876574-16876694 5.4e-05 93_[+1]_19 chr3R:23057432-23057552 6.7e-05 64_[+1]_48 chr3R:24893935-24894055 6.7e-05 86_[+1]_26 chrX:4707329-4707449 6.7e-05 3_[+1]_109 chr3R:8914023-8914143 6.7e-05 69_[+1]_43 chr3L:73491-73611 6.7e-05 36_[+1]_76 chrX:3995306-3995426 6.7e-05 62_[+1]_50 chrX:12675977-12676097 6.7e-05 77_[+1]_35 chrX:4434634-4434754 6.7e-05 61_[+1]_51 chrX:16874828-16874948 6.7e-05 50_[+1]_62 chr2L:10231630-10231750 8.2e-05 108_[+1]_4 chr4:1234882-1235002 8.2e-05 75_[+1]_37 chr3L:17976464-17976584 8.2e-05 31_[+1]_81 chr3R:28735659-28735779 8.2e-05 64_[+1]_48 chr2L:19136443-19136563 0.00011 38_[+1]_74 chr3L:19235425-19235545 0.00011 97_[+1]_15 chr3R:21088686-21088806 0.00012 16_[+1]_96 chrX:8140846-8140966 0.00012 2_[+1]_110 chrX:8108041-8108161 0.00012 82_[+1]_30 chr2R:5715413-5715533 0.00013 43_[+1]_69 chr3L:14600689-14600809 0.00013 43_[+1]_69 chr2L:10333239-10333359 0.00016 47_[+1]_65 chr2L:15332681-15332801 0.00016 54_[+1]_58 chrX:11981741-11981861 0.00016 60_[+1]_52 chrX:5744613-5744733 0.00016 104_[+1]_8 chrX:17799594-17799714 0.00016 8_[+1]_104 chr2R:13910326-13910446 0.00018 95_[+1]_17 chr2L:16275275-16275395 0.0002 70_[+1]_42 chrX:2656153-2656273 0.0002 100_[+1]_12 chr3L:2952858-2952978 0.0002 101_[+1]_11 chr2R:10249122-10249242 0.0002 40_[+1]_72 chrX:18812257-18812377 0.0002 82_[+1]_30 chr3R:12857693-12857813 0.0002 65_[+1]_47 chr3R:10167388-10167508 0.0002 75_[+1]_37 chr3R:28348563-28348683 0.00023 59_[+1]_53 chr3L:20796943-20797063 0.00023 104_[+1]_8 chr3L:13840899-13841019 0.00023 40_[+1]_72 chr2L:13813143-13813263 0.00023 25_[+1]_87 chr2R:13908768-13908888 0.00023 65_[+1]_47 chr2R:6602539-6602659 0.00025 100_[+1]_12 chr3R:28990237-28990357 0.00025 63_[+1]_49 chrX:13248668-13248788 0.00025 105_[+1]_7 chr3L:3823103-3823223 0.00026 92_[+1]_20 chr2R:10125571-10125691 0.00029 60_[+1]_52 chr3R:17646804-17646924 0.00029 13_[+1]_99 chr2L:16972807-16972927 0.00029 5_[+1]_107 chr3L:1940212-1940332 0.00029 22_[+1]_90 chr2L:18314450-18314570 0.00029 81_[+1]_31 chr3R:18573017-18573137 0.00029 71_[+1]_41 chrX:21253358-21253478 0.00029 9_[+1]_103 chr2R:13911054-13911174 0.00029 25_[+1]_87 chr3R:17763737-17763857 0.00029 99_[+1]_13 chr3R:20728081-20728201 0.00029 79_[+1]_33 chr2L:19159969-19160089 0.00032 105_[+1]_7 chr3R:15588999-15589119 0.00037 111_[+1]_1 chrX:6979924-6980044 0.00037 96_[+1]_16 chrX:17772815-17772935 0.00037 44_[+1]_68 chrX:13138005-13138125 0.00037 101_[+1]_11 chr2L:17130868-17130988 0.00041 22_[+1]_90 chr3R:15435014-15435134 0.00041 82_[+1]_30 chr3R:13984592-13984712 0.00045 14_[+1]_98 chrX:10290120-10290240 0.00045 24_[+1]_88 chrX:18137896-18138016 0.00055 48_[+1]_64 chr2R:19415146-19415266 0.00055 28_[+1]_84 chr3R:27280798-27280918 0.00055 10_[+1]_102 chr2R:24304660-24304780 0.00055 72_[+1]_40 chr2R:5360111-5360231 0.00058 30_[+1]_82 chr3R:4870323-4870443 0.00058 81_[+1]_31 chr2L:13227019-13227139 0.00064 16_[+1]_96 chrX:1281261-1281381 0.00064 69_[+1]_43 chr3R:28417970-28418090 0.00064 14_[+1]_98 chrX:6727282-6727402 0.00069 3_[+1]_109 chr3L:20767392-20767512 0.00069 31_[+1]_81 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRAACGRA width=8 seqs=124 chrX:15355538-15355658 ( 46) GGAACGGA 1 chr3R:8118246-8118366 ( 85) GGAACGGA 1 chr2R:24802602-24802722 ( 49) GGAACGGA 1 chr3L:23206566-23206686 ( 70) GGAACGGA 1 chrX:18083980-18084100 ( 81) GGAACGGA 1 chr2L:10209072-10209192 ( 57) GGAACGGA 1 chr3R:22998405-22998525 ( 8) GGAACGGA 1 chr3L:5079180-5079300 ( 102) GGAACGGA 1 chr3R:23147004-23147124 ( 81) GGAACGGA 1 chrX:4795287-4795407 ( 74) GGAACGGA 1 chr2R:24455150-24455270 ( 96) GGAACGGA 1 chrX:7959686-7959806 ( 56) GGAACGGA 1 chrX:2278912-2279032 ( 72) GGAACGGA 1 chr2L:483437-483557 ( 41) GGAACGGA 1 chr2R:7431904-7432024 ( 81) GGAACGGA 1 chrX:18276030-18276150 ( 61) GGAACGGA 1 chrX:21582217-21582337 ( 58) GGAACGGA 1 chr3L:4619592-4619712 ( 46) GGAACGGA 1 chr3R:17063721-17063841 ( 69) GGAACGGA 1 chr3L:13884792-13884912 ( 20) GGAACGGA 1 chrX:7823081-7823201 ( 60) GGAACGGA 1 chrX:10290766-10290886 ( 53) GGAACGGA 1 chr2L:1529623-1529743 ( 81) GGAACGGA 1 chrX:10257342-10257462 ( 84) GGAACGGA 1 chrX:21265367-21265487 ( 65) GGAACGGA 1 chrX:10387072-10387192 ( 63) GGAACGGA 1 chrX:4273638-4273758 ( 63) GGAACGGA 1 chr2R:9387488-9387608 ( 44) GGAACGGA 1 chrX:14338311-14338431 ( 49) GGAACGGA 1 chrX:11822032-11822152 ( 73) GAAACGGA 1 chr2R:23754309-23754429 ( 59) GAAACGGA 1 chrX:6987190-6987310 ( 50) GAAACGGA 1 chrX:17968248-17968368 ( 1) GAAACGGA 1 chr2L:17165905-17166025 ( 58) GAAACGGA 1 chrX:11695925-11696045 ( 53) GAAACGGA 1 chrX:2651298-2651418 ( 81) GAAACGGA 1 chr3L:17535875-17535995 ( 66) GAAACGGA 1 chr3R:18706428-18706548 ( 90) GAAACGGA 1 chrX:17963147-17963267 ( 92) GAAACGGA 1 chrX:3453725-3453845 ( 58) GGAACGAA 1 chrX:15189655-15189775 ( 36) GGAACGAA 1 chr3R:20714553-20714673 ( 64) GGAACGAA 1 chr3L:13803390-13803510 ( 63) GGAACGAA 1 chr3R:21642452-21642572 ( 70) GGAACGAA 1 chrX:873590-873710 ( 92) GGAACGAA 1 chr3R:19997515-19997635 ( 22) GAAACGAA 1 chr2R:10844007-10844127 ( 61) GAAACGAA 1 chr3L:11132211-11132331 ( 63) GAAACGAA 1 chrX:12670593-12670713 ( 33) GAAACGAA 1 chrX:21437374-21437494 ( 15) GAAACGAA 1 chr3R:12021146-12021266 ( 111) GAAACGAA 1 chrX:16876574-16876694 ( 94) GAAACGAA 1 chr3R:23057432-23057552 ( 65) GGAATGGA 1 chr3R:24893935-24894055 ( 87) GGAATGGA 1 chrX:4707329-4707449 ( 4) GGAATGGA 1 chr3R:8914023-8914143 ( 70) GGAATGGA 1 chr3L:73491-73611 ( 37) GGAATGGA 1 chrX:3995306-3995426 ( 63) GGAATGGA 1 chrX:12675977-12676097 ( 78) GGAATGGA 1 chrX:4434634-4434754 ( 62) GGAATGGA 1 chrX:16874828-16874948 ( 51) GGAATGGA 1 chr2L:10231630-10231750 ( 109) GAAATGGA 1 chr4:1234882-1235002 ( 76) GAAATGGA 1 chr3L:17976464-17976584 ( 32) GAAATGGA 1 chr3R:28735659-28735779 ( 65) GAAATGGA 1 chr2L:19136443-19136563 ( 39) GGAACAGA 1 chr3L:19235425-19235545 ( 98) GGAACAGA 1 chr3R:21088686-21088806 ( 17) GGAACGGG 1 chrX:8140846-8140966 ( 3) GGAACGGG 1 chrX:8108041-8108161 ( 83) GGAACGGG 1 chr2R:5715413-5715533 ( 44) GGAATGAA 1 chr3L:14600689-14600809 ( 44) GGAATGAA 1 chr2L:10333239-10333359 ( 48) GAAACGGT 1 chr2L:15332681-15332801 ( 55) GAAACAGA 1 chrX:11981741-11981861 ( 61) GAAACGGT 1 chrX:5744613-5744733 ( 105) GAAACAGA 1 chrX:17799594-17799714 ( 9) GAAACAGA 1 chr2R:13910326-13910446 ( 96) GAAACGGG 1 chr2L:16275275-16275395 ( 71) GAAATGAA 1 chrX:2656153-2656273 ( 101) GGAACGCA 1 chr3L:2952858-2952978 ( 102) GAAATGAA 1 chr2R:10249122-10249242 ( 41) GGAACGCA 1 chrX:18812257-18812377 ( 83) GAAATGAA 1 chr3R:12857693-12857813 ( 66) GAAATGAA 1 chr3R:10167388-10167508 ( 76) GAAATGAA 1 chr3R:28348563-28348683 ( 60) GGAACGAT 1 chr3L:20796943-20797063 ( 105) GGAACAAA 1 chr3L:13840899-13841019 ( 41) GGAACGAT 1 chr2L:13813143-13813263 ( 26) GGAACGAT 1 chr2R:13908768-13908888 ( 66) GGAACGAT 1 chr2R:6602539-6602659 ( 101) GGAACGAG 1 chr3R:28990237-28990357 ( 64) GGAACGAG 1 chrX:13248668-13248788 ( 106) GGAACGAG 1 chr3L:3823103-3823223 ( 93) GAAACGCA 1 chr2R:10125571-10125691 ( 61) GAAACAAA 1 chr3R:17646804-17646924 ( 14) GAAACGAT 1 chr2L:16972807-16972927 ( 6) GAAACAAA 1 chr3L:1940212-1940332 ( 23) GAAACGAT 1 chr2L:18314450-18314570 ( 82) GAAACAAA 1 chr3R:18573017-18573137 ( 72) GAAACGAT 1 chrX:21253358-21253478 ( 10) GAAACAAA 1 chr2R:13911054-13911174 ( 26) GAAACAAA 1 chr3R:17763737-17763857 ( 100) GAAACAAA 1 chr3R:20728081-20728201 ( 80) GAAACGAT 1 chr2L:19159969-19160089 ( 106) AGAACGGA 1 chr3R:15588999-15589119 ( 112) GGAATGGG 1 chrX:6979924-6980044 ( 97) GGAATGGG 1 chrX:17772815-17772935 ( 45) AAAACGGA 1 chrX:13138005-13138125 ( 102) GGAATGGG 1 chr2L:17130868-17130988 ( 23) GAAATGGT 1 chr3R:15435014-15435134 ( 83) GAAATGGT 1 chr3R:13984592-13984712 ( 15) GGAACAGT 1 chrX:10290120-10290240 ( 25) AGAACGAA 1 chrX:18137896-18138016 ( 49) GAAACAGT 1 chr2R:19415146-19415266 ( 29) AAAACGAA 1 chr3R:27280798-27280918 ( 11) AAAACGAA 1 chr2R:24304660-24304780 ( 73) AAAACGAA 1 chr2R:5360111-5360231 ( 31) GAAACAGG 1 chr3R:4870323-4870443 ( 82) GAAATGCA 1 chr2L:13227019-13227139 ( 17) GAAATAAA 1 chrX:1281261-1281381 ( 70) GGAACACA 1 chr3R:28417970-28418090 ( 15) GGAACGCT 1 chrX:6727282-6727402 ( 4) GGAACGCG 1 chr3L:20767392-20767512 ( 32) GGAACAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.12804 E= 2.2e-072 -242 -1360 203 -1360 73 -1360 130 -1360 195 -1360 -1360 -1360 195 -1360 -1360 -1360 -1360 171 -1360 -31 -83 -1360 187 -1360 46 -208 134 -1360 158 -1360 -127 -106 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 124 E= 2.2e-072 0.048387 0.000000 0.951613 0.000000 0.427419 0.000000 0.572581 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.782258 0.000000 0.217742 0.145161 0.000000 0.854839 0.000000 0.354839 0.056452 0.588710 0.000000 0.774194 0.000000 0.096774 0.129032 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRAACGRA MEME-1 regular expression -------------------------------------------------------------------------------- G[GA]AA[CT]G[GA]A -------------------------------------------------------------------------------- Time 7.38 secs. ******************************************************************************** ******************************************************************************** MOTIF TYCGTTCC MEME-2 width = 8 sites = 125 llr = 1005 E-value = 1.6e-084 ******************************************************************************** -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1::3:::: pos.-specific C 169:::7a probability G :::7:::: matrix T 741:aa3: bits 2.1 * 1.9 ** * 1.7 * ** * 1.5 * ** * Relative 1.3 ****** Entropy 1.1 ******* (11.6 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCCGTTCC consensus T A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:24255322-24255442 51 1.48e-05 GGGCTTCCGT TCCGTTCC GTTCGCCAAT chr2L:3646215-3646335 64 1.48e-05 TGCTTGTCGT TCCGTTCC ATTCGTTTGT chrX:1566858-1566978 75 1.48e-05 ttcgctccgt tccgttcc gtttctcttc chrX:12297493-12297613 16 1.48e-05 CGTttccgtt tccgttcc gatgattccc chr2L:9275607-9275727 38 1.48e-05 CGAACtctgt tccgttcc gttctgtttc chr3L:18621744-18621864 70 1.48e-05 CGCCCACCGT TCCGTTCC Cctgccgaag chrX:12392170-12392290 3 1.48e-05 TT TCCGTTCC ACTTCCTACT chrX:5175101-5175221 1 1.48e-05 . tccgttcc gtttcgttac chr3L:5079180-5079300 44 1.48e-05 CTTAAGAGAA TCCGTTCC ACTTGCCACT chrX:10631300-10631420 48 1.48e-05 TTACATAATA tccgttcc attccgtttc chr3L:12687508-12687628 59 1.48e-05 TTTTCCGTTT TCCGTTCC CCGTTTTCCC chrX:22802715-22802835 47 1.48e-05 CGCACCCACT TCCGTTCC ACTTCCGGTC chrX:6725295-6725415 68 1.48e-05 GCCACTGCGT TCCGTTCC GCACTCTCAA chrX:17772815-17772935 31 1.48e-05 GTAGAGCACT TCCGTTCC GCCTTCAAAA chrX:1945352-1945472 34 1.48e-05 TCCGTGTCCA TCCGTTCC GCTGGATCGT chr3L:17183963-17184083 58 1.48e-05 tctgttccgt tccgttcc gttcctgtcc chr2L:20534993-20535113 53 1.48e-05 ttccttccgt tccgttcc cgttcccgtt chr2L:8633793-8633913 30 1.48e-05 tcccatacca tccgttcc catttccatt chr3R:4840887-4841007 10 1.48e-05 ACCTCCCTC TCCGTTCC ACCACTTCTC chrX:3139250-3139370 56 1.48e-05 GCAGAGCAGT TCCGTTCC GTTTCGTTCC chrX:18248383-18248503 18 1.48e-05 CGTGCTCTGT tccgttcc aaaccgatcc chrX:1395388-1395508 67 1.48e-05 tccattccgt tccgttcc gttTGCACTG chr2L:4075768-4075888 64 1.48e-05 CAACTCtcca tccgttcc attccgtgtc chr2L:16148591-16148711 66 1.48e-05 tccgttccgt tccgttcc cttccttccC chrX:19429388-19429508 59 1.48e-05 tccggtacgg tccgttcc gttcttgccc chrX:18137693-18137813 36 3.15e-05 CCCATTTACT TTCGTTCC GATTGCCGCC chr3L:20310461-20310581 69 3.15e-05 CATCCCGGTT TTCGTTCC GTTTTCCTTG chr2L:13227019-13227139 77 3.15e-05 CACATATACA TTCGTTCC CTGACGGCAT chr3R:16585160-16585280 71 3.15e-05 TTACCAATGT TTCGTTCC GGCCACCTTG chr2L:3648575-3648695 34 3.15e-05 CTACTTCCAT TTCGTTCC TTCAAAACAG chr2L:19141305-19141425 3 3.15e-05 GT TTCGTTCC GTTCGTCCAA chr3R:20714553-20714673 56 3.15e-05 TTCGAAATTG TTCGTTCC ggaacgaatg chrX:10790576-10790696 71 3.15e-05 ttcgtttcgt ttcgttCC AATGCATAGT chrX:8046646-8046766 22 3.15e-05 TCCATTCCGA TTCGTTCC GCTTCTCTCA chrX:6709372-6709492 76 3.15e-05 CTCCATTCCG TTCGTTCC GCCCGCCGCT chr2R:10021234-10021354 67 3.15e-05 tccgtaccgt ttcgttcc gttcgtttct chr3L:1940212-1940332 52 4.78e-05 ccattccaat tccattcc attccaaatc chr2L:20991188-20991308 33 4.78e-05 tccattccat tccattcc attccctgcc chr3R:24065905-24066025 105 4.78e-05 AACGCTCTAT TCCATTCC ATTCGTTC chrX:3453186-3453306 49 4.78e-05 tccattccat tccattcc actccattcc chrX:1483583-1483703 10 4.78e-05 CCATTCCCA TCCATTCC CAATGACGCA chrX:6727282-6727402 70 4.78e-05 GCCTGGCCGC TCCATTCC CAGCGTTCCG chrX:4284262-4284382 75 4.78e-05 GCGTCCTCGT TCCATTCC GTTTGTTCCG chrX:2649806-2649926 66 4.78e-05 CACGCGCTGT TCCATTCC GTTTTATTCC chr3L:3823103-3823223 37 4.78e-05 CGCTTCCCGT TCCATTCC TCGTATTCCC chrX:7316354-7316474 55 4.78e-05 GACACACCGT TCCATTCC ATTTCGATCC chrX:13138005-13138125 61 4.78e-05 TTCGAATTCC TCCATTCC CATTCCTGCT chrX:17799594-17799714 34 4.78e-05 gccattccat tccattcc cgttcattcc chrX:3545182-3545302 95 4.78e-05 tccaatccta tccattcc gatctattcc chr3R:4870323-4870443 56 4.78e-05 CGCTGGCCAT TCCATTCC GATCGTTCCG chr3R:9185237-9185357 93 4.78e-05 tccgccccat tccattcc acttcgtttc chrX:3159776-3159896 69 4.78e-05 tgcatttcat tccattcc aACGTTCCGG chr2R:10125571-10125691 22 6.45e-05 TAAAAAACGT TCCGTTTC ACTTCGTCGT chr3R:29069330-29069450 42 6.45e-05 CCTCTCCGCG TCCGTTTC ATCTGTCATT chr2R:24802602-24802722 101 6.45e-05 CATCTACGTT TCCGTTTC AGTGTTTTTA chr2R:23819364-23819484 33 6.45e-05 cactcccact tccgtttc cgttCGCTAA chr2L:10372411-10372531 32 6.45e-05 TAGCCGCCAT TCCGTTTC CACTCATTCC chrX:17733983-17734103 75 6.45e-05 ttgtttcaat tccgtttc gtttcaattc chr2R:18498608-18498728 52 6.45e-05 CCACTTCCAC TCCGTTTC ACGATGTGCC chrX:12213067-12213187 61 6.45e-05 agtttctgtt tccgtttc tgttcctctg chr2R:24304660-24304780 26 6.45e-05 catctccacc tccgtttc gttttcattt chrX:5365148-5365268 28 6.45e-05 CTTTGAAGAT TCCGTTTC GTTTCAGCGC chr3L:1478925-1479045 38 8.29e-05 TCTATTTCCA TTCATTCC GCTTAGTAGT chrX:17994596-17994716 44 8.29e-05 CGCTGCGTGT TTCATTCC GTTTTGTTTT chrX:8624095-8624215 80 8.29e-05 CTTCCCGCGT TTCATTCC ATCGAGGTGG chrX:11640592-11640712 23 8.29e-05 CGCTTTTTGT TTCATTCC GTCTGTCCCA chrX:10791128-10791248 55 8.29e-05 GTTCCGCTGT TTCATTCC ATGCGTTCTG chr2R:15198768-15198888 73 8.29e-05 TCCTTCAGTT TTCATTCC TCGAGGAACT chr3R:20080311-20080431 67 8.29e-05 CCATATATGT TTCATTCC CAAAAATGTT chr3R:15588999-15589119 9 1.02e-04 TTAACAAt ttcgtttc atttcgtttt chrX:19021146-19021266 69 1.02e-04 ttcatttcat ttcgtttc gtctcgtttg chr2L:19137792-19137912 47 1.02e-04 TCGTTTCATT TTCGTTTC ACTTTTTCCC chrX:9310374-9310494 34 1.02e-04 CCGgttccgg ttcgtttc gtttcgtttc chr3L:11135023-11135143 13 1.02e-04 CATCGCGGCT TTCGTTTC GACTGCCTGG chr3R:29559555-29559675 61 1.02e-04 ttcatttcgt ttcgtttc gtatcatttG chr3R:15434813-15434933 17 1.02e-04 GCCATTCCAT TTCGTTTC TCAGCGGCAG chrX:14892190-14892310 18 1.02e-04 ttcatttcgg ttcgtttc attGTGCCTC chr3L:2952858-2952978 37 1.02e-04 ttcttttcct ttcgtttc gtttcgtttc chrX:12675977-12676097 30 1.02e-04 ATTgttttgt ttcgtttc gttttgtttc chrX:1640129-1640249 30 1.02e-04 ttcgtctcgt ttcgtttc gtctcgtttc chr3R:18706428-18706548 47 1.02e-04 GTTCGTAGGT TTCGTTTC ACTCAATGGG chr3R:31605185-31605305 57 1.15e-04 TAAAATTCCA CCCGTTCC ACTGGTGGTT chr3R:19891432-19891552 65 1.15e-04 ccaacccatt cccgttcc tatcccattG chrX:1483782-1483902 48 1.15e-04 gccgttccgt cccgttcc TATCCCTCCT chrX:17967185-17967305 85 1.15e-04 CGCTCATTCC CCCGTTCC GTTGGCCGGT chr3L:18866044-18866164 25 1.29e-04 TTTGATTTCC ACCGTTCC GTCATCGCCG chr3L:641507-641627 58 1.29e-04 GAGCAGCGCC ACCGTTCC CTTCGCACGC chrX:15191560-15191680 34 1.29e-04 ctcacccgca accgttcc catttccgAT chr3R:4856758-4856878 41 1.29e-04 TTTCTTTCCC ACCGTTCC GTCCGGTCAC chr3R:20574187-20574307 64 1.29e-04 TACCTGAGAT ACCGTTCC AGAGAGCCGA chr2R:5709734-5709854 44 1.62e-04 TTGTACTCGA CTCGTTCC AGTTACCGTT chr2R:6602539-6602659 85 1.62e-04 TTCGACTGGT TCCATTTC CAATTCGAGG chrX:19432137-19432257 96 1.62e-04 GTTCCTgttt ctcgttcc cgttcgcgta chr3R:4865384-4865504 89 1.78e-04 GCCGATTCCA ATCGTTCC GACCGCGAGG chrX:8080755-8080875 96 1.78e-04 TCGGACCAAA ATCGTTCC GAACAGCCCA chrX:19151964-19152084 110 1.99e-04 TCGTTTTGAT TTCATTTC GTT chr3L:20767392-20767512 58 1.99e-04 ACAGCGAAGC TTCATTTC CGGTTATTCC chr2R:12263394-12263514 60 2.43e-04 GGGTTTCTGT TCTGTTCC ATTTTCCTTG chr3L:22199070-22199190 2 2.43e-04 A CCCATTCC GTTTGGTTCG chr3R:14329303-14329423 69 2.43e-04 TCCAGAGCCA TCTGTTCC CAGCCCACCC chr2L:10209072-10209192 12 2.43e-04 GAGAAAAAGG TCTGTTCC AGTACAAGAG chrX:15769589-15769709 33 2.43e-04 TTCACATTCC GCCGTTCC ACATTTGCTT chr2L:13813143-13813263 49 2.43e-04 GTATGGGGTC CCCATTCC GCGTTCCCGA chr3L:1538724-1538844 48 2.58e-04 TGCATCGAAC CCCGTTTC CACTCGTTTG chr2L:10333239-10333359 78 2.58e-04 TGGAAGTAAT CCCGTTTC CCGTTGTTTC chr2R:4225051-4225171 64 3.39e-04 caccgtgttc ctcattcc aagtgttttt chrX:11386818-11386938 56 3.39e-04 TTCAATTCCA GTCGTTCC AGCTTTTCCG chr2R:19415146-19415266 60 3.39e-04 TTAGTTTCCG GTCGTTCC ACATGGGGCC chr3R:26552293-26552413 51 3.39e-04 CCATGTTTTT TTTGTTCC AACtgttgtg chr3L:17513642-17513762 6 3.39e-04 ATGCC GTCGTTCC CGATGTTGTT chr3L:71430-71550 85 3.39e-04 CCGAATCCCT CTCATTCC AATGCTCTCG chr2L:6656313-6656433 65 3.39e-04 TGTCATCTGT CTCATTCC AAACATTCCA chr2L:19159969-19160089 29 3.39e-04 GTGTTTCAAA TTTGTTCC TATCTGTGTT chr2R:13342928-13343048 77 3.56e-04 GTGCTCAATT CTCGTTTC TGTGTGTTTT chr2R:5360111-5360231 59 3.91e-04 TTTTAGTTCC ATCGTTTC AAAATTACAG chr3R:15435014-15435134 110 3.91e-04 ACAGCTTACC ATCGTTTC GAT chrX:18276030-18276150 73 3.91e-04 aacggaatgg atcgtttc gcttcggatc chrX:17995642-17995762 23 3.91e-04 CAATTGCCAA ATCGTTTC TACCCAGCAG chr2R:7431904-7432024 22 4.24e-04 TCTGGGATGG GCCATTCC TCATGTTTGC chrX:2650829-2650949 51 4.24e-04 TTGGCTGCGT TCTATTCC GCTGTGCCAA chrX:656606-656726 72 5.28e-04 TCCCTTCATC ACCATTTC ATCGTTGAAT chr3L:20203740-20203860 76 5.28e-04 CCATTTTTTA TTTATTCC ACCAGATAGA chrX:3465715-3465835 112 5.84e-04 gtgtgtgtgt gtcgtttc c chr2L:7675211-7675331 23 5.99e-04 GGTTGATTTG CCTGTTCC ACTGTCACTT chr3R:17063721-17063841 19 5.99e-04 CCAAAAACGA CCTGTTCC GTTTGCTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:24255322-24255442 1.5e-05 50_[+2]_62 chr2L:3646215-3646335 1.5e-05 63_[+2]_49 chrX:1566858-1566978 1.5e-05 74_[+2]_38 chrX:12297493-12297613 1.5e-05 15_[+2]_97 chr2L:9275607-9275727 1.5e-05 37_[+2]_75 chr3L:18621744-18621864 1.5e-05 69_[+2]_43 chrX:12392170-12392290 1.5e-05 2_[+2]_110 chrX:5175101-5175221 1.5e-05 [+2]_112 chr3L:5079180-5079300 1.5e-05 43_[+2]_69 chrX:10631300-10631420 1.5e-05 47_[+2]_65 chr3L:12687508-12687628 1.5e-05 58_[+2]_54 chrX:22802715-22802835 1.5e-05 46_[+2]_66 chrX:6725295-6725415 1.5e-05 67_[+2]_45 chrX:17772815-17772935 1.5e-05 30_[+2]_82 chrX:1945352-1945472 1.5e-05 33_[+2]_79 chr3L:17183963-17184083 1.5e-05 57_[+2]_55 chr2L:20534993-20535113 1.5e-05 52_[+2]_60 chr2L:8633793-8633913 1.5e-05 29_[+2]_83 chr3R:4840887-4841007 1.5e-05 9_[+2]_103 chrX:3139250-3139370 1.5e-05 55_[+2]_57 chrX:18248383-18248503 1.5e-05 17_[+2]_95 chrX:1395388-1395508 1.5e-05 66_[+2]_46 chr2L:4075768-4075888 1.5e-05 63_[+2]_49 chr2L:16148591-16148711 1.5e-05 65_[+2]_47 chrX:19429388-19429508 1.5e-05 58_[+2]_54 chrX:18137693-18137813 3.1e-05 35_[+2]_77 chr3L:20310461-20310581 3.1e-05 68_[+2]_44 chr2L:13227019-13227139 3.1e-05 76_[+2]_36 chr3R:16585160-16585280 3.1e-05 70_[+2]_42 chr2L:3648575-3648695 3.1e-05 33_[+2]_79 chr2L:19141305-19141425 3.1e-05 2_[+2]_110 chr3R:20714553-20714673 3.1e-05 55_[+2]_57 chrX:10790576-10790696 3.1e-05 70_[+2]_42 chrX:8046646-8046766 3.1e-05 21_[+2]_91 chrX:6709372-6709492 3.1e-05 75_[+2]_37 chr2R:10021234-10021354 3.1e-05 66_[+2]_46 chr3L:1940212-1940332 4.8e-05 51_[+2]_61 chr2L:20991188-20991308 4.8e-05 32_[+2]_80 chr3R:24065905-24066025 4.8e-05 104_[+2]_8 chrX:3453186-3453306 4.8e-05 48_[+2]_64 chrX:1483583-1483703 4.8e-05 9_[+2]_103 chrX:6727282-6727402 4.8e-05 69_[+2]_43 chrX:4284262-4284382 4.8e-05 74_[+2]_38 chrX:2649806-2649926 4.8e-05 65_[+2]_47 chr3L:3823103-3823223 4.8e-05 36_[+2]_76 chrX:7316354-7316474 4.8e-05 54_[+2]_58 chrX:13138005-13138125 4.8e-05 60_[+2]_52 chrX:17799594-17799714 4.8e-05 33_[+2]_79 chrX:3545182-3545302 4.8e-05 94_[+2]_18 chr3R:4870323-4870443 4.8e-05 55_[+2]_57 chr3R:9185237-9185357 4.8e-05 92_[+2]_20 chrX:3159776-3159896 4.8e-05 68_[+2]_44 chr2R:10125571-10125691 6.4e-05 21_[+2]_91 chr3R:29069330-29069450 6.4e-05 41_[+2]_71 chr2R:24802602-24802722 6.4e-05 100_[+2]_12 chr2R:23819364-23819484 6.4e-05 32_[+2]_80 chr2L:10372411-10372531 6.4e-05 31_[+2]_81 chrX:17733983-17734103 6.4e-05 74_[+2]_38 chr2R:18498608-18498728 6.4e-05 51_[+2]_61 chrX:12213067-12213187 6.4e-05 60_[+2]_52 chr2R:24304660-24304780 6.4e-05 25_[+2]_87 chrX:5365148-5365268 6.4e-05 27_[+2]_85 chr3L:1478925-1479045 8.3e-05 37_[+2]_75 chrX:17994596-17994716 8.3e-05 43_[+2]_69 chrX:8624095-8624215 8.3e-05 79_[+2]_33 chrX:11640592-11640712 8.3e-05 22_[+2]_90 chrX:10791128-10791248 8.3e-05 54_[+2]_58 chr2R:15198768-15198888 8.3e-05 72_[+2]_40 chr3R:20080311-20080431 8.3e-05 66_[+2]_46 chr3R:15588999-15589119 0.0001 8_[+2]_104 chrX:19021146-19021266 0.0001 68_[+2]_44 chr2L:19137792-19137912 0.0001 46_[+2]_66 chrX:9310374-9310494 0.0001 33_[+2]_79 chr3L:11135023-11135143 0.0001 12_[+2]_100 chr3R:29559555-29559675 0.0001 60_[+2]_52 chr3R:15434813-15434933 0.0001 16_[+2]_96 chrX:14892190-14892310 0.0001 17_[+2]_95 chr3L:2952858-2952978 0.0001 36_[+2]_76 chrX:12675977-12676097 0.0001 29_[+2]_83 chrX:1640129-1640249 0.0001 29_[+2]_83 chr3R:18706428-18706548 0.0001 46_[+2]_66 chr3R:31605185-31605305 0.00011 56_[+2]_56 chr3R:19891432-19891552 0.00011 64_[+2]_48 chrX:1483782-1483902 0.00011 47_[+2]_65 chrX:17967185-17967305 0.00011 84_[+2]_28 chr3L:18866044-18866164 0.00013 24_[+2]_88 chr3L:641507-641627 0.00013 57_[+2]_55 chrX:15191560-15191680 0.00013 33_[+2]_79 chr3R:4856758-4856878 0.00013 40_[+2]_72 chr3R:20574187-20574307 0.00013 63_[+2]_49 chr2R:5709734-5709854 0.00016 43_[+2]_69 chr2R:6602539-6602659 0.00016 84_[+2]_28 chrX:19432137-19432257 0.00016 95_[+2]_17 chr3R:4865384-4865504 0.00018 88_[+2]_24 chrX:8080755-8080875 0.00018 95_[+2]_17 chrX:19151964-19152084 0.0002 109_[+2]_3 chr3L:20767392-20767512 0.0002 57_[+2]_55 chr2R:12263394-12263514 0.00024 59_[+2]_53 chr3L:22199070-22199190 0.00024 1_[+2]_111 chr3R:14329303-14329423 0.00024 68_[+2]_44 chr2L:10209072-10209192 0.00024 11_[+2]_101 chrX:15769589-15769709 0.00024 32_[+2]_80 chr2L:13813143-13813263 0.00024 48_[+2]_64 chr3L:1538724-1538844 0.00026 47_[+2]_65 chr2L:10333239-10333359 0.00026 77_[+2]_35 chr2R:4225051-4225171 0.00034 63_[+2]_49 chrX:11386818-11386938 0.00034 55_[+2]_57 chr2R:19415146-19415266 0.00034 59_[+2]_53 chr3R:26552293-26552413 0.00034 50_[+2]_62 chr3L:17513642-17513762 0.00034 5_[+2]_107 chr3L:71430-71550 0.00034 84_[+2]_28 chr2L:6656313-6656433 0.00034 64_[+2]_48 chr2L:19159969-19160089 0.00034 28_[+2]_84 chr2R:13342928-13343048 0.00036 76_[+2]_36 chr2R:5360111-5360231 0.00039 58_[+2]_54 chr3R:15435014-15435134 0.00039 109_[+2]_3 chrX:18276030-18276150 0.00039 72_[+2]_40 chrX:17995642-17995762 0.00039 22_[+2]_90 chr2R:7431904-7432024 0.00042 21_[+2]_91 chrX:2650829-2650949 0.00042 50_[+2]_62 chrX:656606-656726 0.00053 71_[+2]_41 chr3L:20203740-20203860 0.00053 75_[+2]_37 chrX:3465715-3465835 0.00058 111_[+2]_1 chr2L:7675211-7675331 0.0006 22_[+2]_90 chr3R:17063721-17063841 0.0006 18_[+2]_94 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TYCGTTCC width=8 seqs=125 chr2R:24255322-24255442 ( 51) TCCGTTCC 1 chr2L:3646215-3646335 ( 64) TCCGTTCC 1 chrX:1566858-1566978 ( 75) TCCGTTCC 1 chrX:12297493-12297613 ( 16) TCCGTTCC 1 chr2L:9275607-9275727 ( 38) TCCGTTCC 1 chr3L:18621744-18621864 ( 70) TCCGTTCC 1 chrX:12392170-12392290 ( 3) TCCGTTCC 1 chrX:5175101-5175221 ( 1) TCCGTTCC 1 chr3L:5079180-5079300 ( 44) TCCGTTCC 1 chrX:10631300-10631420 ( 48) TCCGTTCC 1 chr3L:12687508-12687628 ( 59) TCCGTTCC 1 chrX:22802715-22802835 ( 47) TCCGTTCC 1 chrX:6725295-6725415 ( 68) TCCGTTCC 1 chrX:17772815-17772935 ( 31) TCCGTTCC 1 chrX:1945352-1945472 ( 34) TCCGTTCC 1 chr3L:17183963-17184083 ( 58) TCCGTTCC 1 chr2L:20534993-20535113 ( 53) TCCGTTCC 1 chr2L:8633793-8633913 ( 30) TCCGTTCC 1 chr3R:4840887-4841007 ( 10) TCCGTTCC 1 chrX:3139250-3139370 ( 56) TCCGTTCC 1 chrX:18248383-18248503 ( 18) TCCGTTCC 1 chrX:1395388-1395508 ( 67) TCCGTTCC 1 chr2L:4075768-4075888 ( 64) TCCGTTCC 1 chr2L:16148591-16148711 ( 66) TCCGTTCC 1 chrX:19429388-19429508 ( 59) TCCGTTCC 1 chrX:18137693-18137813 ( 36) TTCGTTCC 1 chr3L:20310461-20310581 ( 69) TTCGTTCC 1 chr2L:13227019-13227139 ( 77) TTCGTTCC 1 chr3R:16585160-16585280 ( 71) TTCGTTCC 1 chr2L:3648575-3648695 ( 34) TTCGTTCC 1 chr2L:19141305-19141425 ( 3) TTCGTTCC 1 chr3R:20714553-20714673 ( 56) TTCGTTCC 1 chrX:10790576-10790696 ( 71) TTCGTTCC 1 chrX:8046646-8046766 ( 22) TTCGTTCC 1 chrX:6709372-6709492 ( 76) TTCGTTCC 1 chr2R:10021234-10021354 ( 67) TTCGTTCC 1 chr3L:1940212-1940332 ( 52) TCCATTCC 1 chr2L:20991188-20991308 ( 33) TCCATTCC 1 chr3R:24065905-24066025 ( 105) TCCATTCC 1 chrX:3453186-3453306 ( 49) TCCATTCC 1 chrX:1483583-1483703 ( 10) TCCATTCC 1 chrX:6727282-6727402 ( 70) TCCATTCC 1 chrX:4284262-4284382 ( 75) TCCATTCC 1 chrX:2649806-2649926 ( 66) TCCATTCC 1 chr3L:3823103-3823223 ( 37) TCCATTCC 1 chrX:7316354-7316474 ( 55) TCCATTCC 1 chrX:13138005-13138125 ( 61) TCCATTCC 1 chrX:17799594-17799714 ( 34) TCCATTCC 1 chrX:3545182-3545302 ( 95) TCCATTCC 1 chr3R:4870323-4870443 ( 56) TCCATTCC 1 chr3R:9185237-9185357 ( 93) TCCATTCC 1 chrX:3159776-3159896 ( 69) TCCATTCC 1 chr2R:10125571-10125691 ( 22) TCCGTTTC 1 chr3R:29069330-29069450 ( 42) TCCGTTTC 1 chr2R:24802602-24802722 ( 101) TCCGTTTC 1 chr2R:23819364-23819484 ( 33) TCCGTTTC 1 chr2L:10372411-10372531 ( 32) TCCGTTTC 1 chrX:17733983-17734103 ( 75) TCCGTTTC 1 chr2R:18498608-18498728 ( 52) TCCGTTTC 1 chrX:12213067-12213187 ( 61) TCCGTTTC 1 chr2R:24304660-24304780 ( 26) TCCGTTTC 1 chrX:5365148-5365268 ( 28) TCCGTTTC 1 chr3L:1478925-1479045 ( 38) TTCATTCC 1 chrX:17994596-17994716 ( 44) TTCATTCC 1 chrX:8624095-8624215 ( 80) TTCATTCC 1 chrX:11640592-11640712 ( 23) TTCATTCC 1 chrX:10791128-10791248 ( 55) TTCATTCC 1 chr2R:15198768-15198888 ( 73) TTCATTCC 1 chr3R:20080311-20080431 ( 67) TTCATTCC 1 chr3R:15588999-15589119 ( 9) TTCGTTTC 1 chrX:19021146-19021266 ( 69) TTCGTTTC 1 chr2L:19137792-19137912 ( 47) TTCGTTTC 1 chrX:9310374-9310494 ( 34) TTCGTTTC 1 chr3L:11135023-11135143 ( 13) TTCGTTTC 1 chr3R:29559555-29559675 ( 61) TTCGTTTC 1 chr3R:15434813-15434933 ( 17) TTCGTTTC 1 chrX:14892190-14892310 ( 18) TTCGTTTC 1 chr3L:2952858-2952978 ( 37) TTCGTTTC 1 chrX:12675977-12676097 ( 30) TTCGTTTC 1 chrX:1640129-1640249 ( 30) TTCGTTTC 1 chr3R:18706428-18706548 ( 47) TTCGTTTC 1 chr3R:31605185-31605305 ( 57) CCCGTTCC 1 chr3R:19891432-19891552 ( 65) CCCGTTCC 1 chrX:1483782-1483902 ( 48) CCCGTTCC 1 chrX:17967185-17967305 ( 85) CCCGTTCC 1 chr3L:18866044-18866164 ( 25) ACCGTTCC 1 chr3L:641507-641627 ( 58) ACCGTTCC 1 chrX:15191560-15191680 ( 34) ACCGTTCC 1 chr3R:4856758-4856878 ( 41) ACCGTTCC 1 chr3R:20574187-20574307 ( 64) ACCGTTCC 1 chr2R:5709734-5709854 ( 44) CTCGTTCC 1 chr2R:6602539-6602659 ( 85) TCCATTTC 1 chrX:19432137-19432257 ( 96) CTCGTTCC 1 chr3R:4865384-4865504 ( 89) ATCGTTCC 1 chrX:8080755-8080875 ( 96) ATCGTTCC 1 chrX:19151964-19152084 ( 110) TTCATTTC 1 chr3L:20767392-20767512 ( 58) TTCATTTC 1 chr2R:12263394-12263514 ( 60) TCTGTTCC 1 chr3L:22199070-22199190 ( 2) CCCATTCC 1 chr3R:14329303-14329423 ( 69) TCTGTTCC 1 chr2L:10209072-10209192 ( 12) TCTGTTCC 1 chrX:15769589-15769709 ( 33) GCCGTTCC 1 chr2L:13813143-13813263 ( 49) CCCATTCC 1 chr3L:1538724-1538844 ( 48) CCCGTTTC 1 chr2L:10333239-10333359 ( 78) CCCGTTTC 1 chr2R:4225051-4225171 ( 64) CTCATTCC 1 chrX:11386818-11386938 ( 56) GTCGTTCC 1 chr2R:19415146-19415266 ( 60) GTCGTTCC 1 chr3R:26552293-26552413 ( 51) TTTGTTCC 1 chr3L:17513642-17513762 ( 6) GTCGTTCC 1 chr3L:71430-71550 ( 85) CTCATTCC 1 chr2L:6656313-6656433 ( 65) CTCATTCC 1 chr2L:19159969-19160089 ( 29) TTTGTTCC 1 chr2R:13342928-13343048 ( 77) CTCGTTTC 1 chr2R:5360111-5360231 ( 59) ATCGTTTC 1 chr3R:15435014-15435134 ( 110) ATCGTTTC 1 chrX:18276030-18276150 ( 73) ATCGTTTC 1 chrX:17995642-17995762 ( 23) ATCGTTTC 1 chr2R:7431904-7432024 ( 22) GCCATTCC 1 chrX:2650829-2650949 ( 51) TCTATTCC 1 chrX:656606-656726 ( 72) ACCATTTC 1 chr3L:20203740-20203860 ( 76) TTTATTCC 1 chrX:3465715-3465835 ( 112) GTCGTTTC 1 chr2L:7675211-7675331 ( 23) CCTGTTCC 1 chr3R:17063721-17063841 ( 19) CCTGTTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.12231 E= 1.6e-084 -143 -90 -228 143 -1361 131 -1361 60 -1361 196 -1361 -190 12 -1361 163 -1361 -1361 -1361 -1361 189 -1361 -1361 -1361 189 -1361 161 -1361 1 -1361 206 -1361 -1361 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 125 E= 1.6e-084 0.096000 0.128000 0.048000 0.728000 0.000000 0.592000 0.000000 0.408000 0.000000 0.928000 0.000000 0.072000 0.280000 0.000000 0.720000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.728000 0.000000 0.272000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCGTTCC MEME-2 regular expression -------------------------------------------------------------------------------- T[CT]C[GA]TT[CT]C -------------------------------------------------------------------------------- Time 13.35 secs. ******************************************************************************** ******************************************************************************** MOTIF GTTYCRTT MEME-3 width = 8 sites = 99 llr = 740 E-value = 9.4e-026 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1::::51: pos.-specific C :::58:2: probability G 8:::15:: matrix T 2aa5117a bits 2.1 1.9 ** * 1.7 ** * 1.5 ** * Relative 1.3 ** * * Entropy 1.1 ***** * (10.8 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTTTCGTT consensus C AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:18137693-18137813 65 3.45e-05 GTTTCATACC GTTCCGTT AAATCGTATG chr3R:15588999-15589119 34 3.45e-05 tttgttttcg gtttcgtt gcgtttggat chrX:1566858-1566978 58 3.45e-05 gttttgtttc gtttcgtt tcgctccgtt chr2L:19137792-19137912 34 3.45e-05 CCTGTGCCTA GTTTCGTT TCATTTTCGT chrX:12297493-12297613 48 3.45e-05 tcccccaatc gtttcgtt atcatttcgt chr2L:9275607-9275727 51 3.45e-05 gttccgttct gtttcgtt TTCATCCTGT chr3L:18621744-18621864 19 3.45e-05 tactgctAGT GTTTCGTT CTCGGCCGTT chrX:12392170-12392290 24 3.45e-05 TCCTACTTCT GTTTCGTT TTCGCCGTTC chrX:9310374-9310494 47 3.45e-05 gtttcgtttc gtttcgtt tcgattcgGG chrX:5175101-5175221 19 3.45e-05 gtttcgttac gtttcgtt TGGCTACGAT chrX:10631300-10631420 61 3.45e-05 gttccattcc gtttcgtt tcgtttctcg chr3L:2952858-2952978 45 3.45e-05 ctttcgtttc gtttcgtt tcttttcttt chr2L:7675211-7675331 41 3.45e-05 ACTGTCACTT GTTCCGTT CTCGCTCTCT chrX:10790576-10790696 14 3.45e-05 attctttttc gtttcgtt tgctctcctt chr2L:20534993-20535113 26 3.45e-05 CACCAAGCTc gttccgtt cccttccgtt chrX:3139250-3139370 64 3.45e-05 GTTCCGTTCC GTTTCGTT CCAGACGATA chr2L:16148591-16148711 54 3.45e-05 CCTCCTttcc gttccgtt ccgttccgtt chrX:12675977-12676097 43 3.45e-05 gtttcgtttt gtttcgtt GGCCCGTGTC chrX:17967185-17967305 110 3.45e-05 GGTGTTCCTC GTTTCGTT CTC chrX:1640129-1640249 13 3.45e-05 gtctcgtttc gtttcgtt tcgtctcgtt chr3R:9185237-9185357 34 3.45e-05 GATAGCTTCC GTTTCGTT CTGCttgcac chrX:19429388-19429508 102 3.45e-05 tggccgcctc gtttcgtt ccgttcactt chr2R:4547361-4547481 21 7.27e-05 TTTTTCGAGT GTTTCATT GTCAGATGTT chr3L:20203740-20203860 63 7.27e-05 GTGAAACATT GTTCCATT TTTTATTTAT chrX:19021146-19021266 57 7.27e-05 Ttttcatttc gtttcatt tcatttcgtt chr2R:19415146-19415266 44 7.27e-05 GAAAGAAAAT GTTTCATT AGTTTCCGGT chrX:15464716-15464836 35 7.27e-05 AGTCATTGCT GTTCCATT GCCAGATTCC chr2L:3648575-3648695 84 7.27e-05 AAATAAACAA GTTTCATT GATGAAAAAT chr3R:16413899-16414019 73 7.27e-05 ACGCCATGTT GTTtcatt cgctcactca chrX:22802715-22802835 75 7.27e-05 CACTGGTTCT GTTTCATT CTTCTGGGGG chrX:6725295-6725415 50 7.27e-05 GCTTTGCTGT GTTTCATT GCCACTGCGT chrX:17772815-17772935 93 7.27e-05 TGGCATGAAG GTTCCATT CCGCCGGAGT chrX:1945352-1945472 53 7.27e-05 CTGGATCGTC GTTCCATT CCCCGTTCCC chrX:2650829-2650949 1 7.27e-05 . GTTTCATT TTGCTGTTTC chrX:8046646-8046766 10 7.27e-05 TTACGCTTG GTTCCATT CCGATTCGTT chr2L:8633793-8633913 69 7.27e-05 gcgcgcttcc gttccatt ccatgccgtt chrX:1395388-1395508 55 7.27e-05 ttccgtttcc gttccatt ccgttccgtt chr3L:3823103-3823223 14 7.27e-05 ttctatttct gtttcATT GCCATCGCTT chr2L:4075768-4075888 93 7.27e-05 ttgcgtttcc gtttcatt ccattccgtt chrX:5365148-5365268 47 7.27e-05 TTTCAGCGCC GTTTCATT TTCAGTTCTC chr3R:17646804-17646924 102 1.03e-04 TGTTTTTCTT GTTTCGCT TTATTATTTA chrX:6727282-6727402 82 1.03e-04 CATTCCCAGC GTTCCGCT GTGAACGCGC chrX:21437374-21437494 27 1.03e-04 AACGAAACGG GTTTCGCT AATCCggaaa chrX:10791128-10791248 45 1.03e-04 TTTTCCACGC GTTCCGCT GTTTCATTCC chrX:5744613-5744733 8 1.03e-04 TTTCTGC GTTTCGCT GTTCCGCTTC chr3R:4870323-4870443 68 1.03e-04 CATTCCGATC GTTCCGCT TTGAGTGAAA chr2L:19163296-19163416 76 1.37e-04 CGATAGGAGC GTTCCACT GTTGTTTCAC chr3R:16585160-16585280 7 1.37e-04 CTGCTT GTTCCACT TTCACGCTGT chr3R:31605185-31605305 72 1.37e-04 TCCACTGGTG GTTCCACT GTACAGTAGA chr2L:6656313-6656433 90 1.37e-04 CCACAGTTGG GTTCCACT AAAGTATCAC chr2R:18498608-18498728 39 1.37e-04 TGCGGCTCTG GTTCCACT TCCACTCCGT chr3R:10167388-10167508 60 1.37e-04 GAAAATGAAA GTTCCACT CTTCACCTGA chr2L:9256455-9256575 52 1.37e-04 AGTCTGGCGC GTTCCACT TTCACACGTT chr3L:12687508-12687628 50 1.77e-04 TTTTTCCGTT TTTCCGTT TTCCGTTCCC chrX:13138005-13138125 45 1.77e-04 GCTTGCAACA TTTTCGTT CGAATTCCTC chrX:6979331-6979451 15 2.21e-04 AGTTGAATCA TTTTCATT AGGGTTTGGT chr2R:5709734-5709854 73 2.21e-04 CGCATTTGTG TTTTCATT TTGTTGAAAA chr2L:20991188-20991308 21 2.21e-04 TCCCTCAGCA Tttccatt ccattccatt chrX:17733983-17734103 46 2.21e-04 AAAcatttca tttccatt tcattccgct chr2R:24304660-24304780 35 2.21e-04 ctccgtttcg ttttcatt tccattttca chrX:3545182-3545302 16 2.21e-04 GTCCACTCGA TTTTCATT ACCTCTTCCC chr3L:23206566-23206686 96 2.61e-04 GATTCCAAGT GTTCCTTT ATCTAGTTTC chrX:15191560-15191680 55 2.61e-04 ttccgATTTT GTTCCTTT GCCACACCGT chr3R:4856758-4856878 30 2.61e-04 GTCTCTTTTT GTTTCTTT CCCACCGTTC chrX:6709372-6709492 37 2.61e-04 CAATCGCAAC GTTTCTTT TCTGCGTTCC chr2R:10021234-10021354 79 2.61e-04 cgttccgttc gtttcttt tTTCCTTTTG chr3R:19997515-19997635 101 3.34e-04 TGCGGTCCAT GTTCGGTT TTGGGTCGGT chr3L:22199070-22199190 10 3.34e-04 ACCCATTCC GTTTGGTT CGCTTCGTCT chr3R:23147004-23147124 62 3.34e-04 gatcggttcg gttcggtt cggatcggat chrX:17994596-17994716 77 3.34e-04 CGGCAAGGTC GTTTTGTT GTTTGGCGGA chr2R:15164843-15164963 100 3.34e-04 CAAGCGAAGC GTTCGGTT CGATAGGTTG chrX:12213067-12213187 92 3.34e-04 gtttgttttt gttttgtt tTCGTATATT chrX:1483782-1483902 110 3.34e-04 ACCGACTTTT GTTTTGTT TTT chr3L:17183963-17184083 46 3.34e-04 GACAACGCAc gttctgtt ccgttccgtt chr3R:18850194-18850314 35 3.34e-04 TGTGTTGCGC GTTCTGTT GTGCTTTGTT chrX:3995306-3995426 31 3.34e-04 CTTGGGCTAG GTTCGGTT TTGGATTTGA chrX:656606-656726 46 4.05e-04 CGTTCTCTAT GTTTCGAT TCTACTTATC chrX:15298061-15298181 1 4.05e-04 . GTTTCGAT AGCGAGTGTA chr3L:17513642-17513762 64 4.05e-04 TGCCGCTTGC GTTCCGAT TCCTCGAGCG chrX:3465715-3465835 48 4.85e-04 TTTTTTATTT GTTCGATT CACATACGTG chr3R:8914023-8914143 9 4.85e-04 GGGTTGAC GTTTTATT TGATTTTACG chr3L:1478925-1479045 26 4.85e-04 TATCCTCCTA GTTCTATT TCCATTCATT chrX:2649806-2649926 74 4.85e-04 GTTCCATTCC GTTTTATT CCGTTCGAAA chr3R:20080311-20080431 39 4.85e-04 TTCGGTCTGT GTTCGATT CAGCATTCCC chrX:3453186-3453306 62 5.64e-04 attccactcc attccatt caattcAATT chr3R:29559555-29559675 44 5.64e-04 GAACAACttc atttcatt tcatttcgtt chr3L:71430-71550 47 5.64e-04 TTGCTGTGCC ATTCCATT TATTCCATTC chrX:14892190-14892310 1 5.64e-04 . atttcatt tcatttcggt chrX:8624095-8624215 50 5.64e-04 TATCATGCGT ATTCCATT GCCATCGTAC chrX:17995642-17995762 9 5.64e-04 GCTGCCGT GTTCCAAT TGCCAAATCG chrX:18248383-18248503 108 5.64e-04 ACGCGTTCCA GTTCCAAT GTGTC chrX:17799594-17799714 57 5.64e-04 attcccgttc attccatt ctattccCCG chr2R:24277171-24277291 113 6.00e-04 CTCCATCTCC TTTTCGCT chrX:11386818-11386938 68 6.00e-04 CGTTCCAGCT TTTCCGCT TTTCCGGCTG chr2R:7431904-7432024 5 6.00e-04 CCAC TTTTCGCT CTGGGATGGG chrX:17968248-17968368 88 6.00e-04 GTCTGCGGCC TTTCCGCT TTCCAGTCGA chrX:11640592-11640712 9 6.00e-04 GCAGTTAA TTTTCGCT TTTTGTTTCA chr2R:23819364-23819484 19 6.39e-04 ttcacttcca tttccact cccacttccg chr3L:17976464-17976584 94 6.39e-04 CCCAGCCCAC TTTTCACT TTTCCCGTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:18137693-18137813 3.5e-05 64_[+3]_48 chr3R:15588999-15589119 3.5e-05 33_[+3]_79 chrX:1566858-1566978 3.5e-05 57_[+3]_55 chr2L:19137792-19137912 3.5e-05 33_[+3]_79 chrX:12297493-12297613 3.5e-05 47_[+3]_65 chr2L:9275607-9275727 3.5e-05 50_[+3]_62 chr3L:18621744-18621864 3.5e-05 18_[+3]_94 chrX:12392170-12392290 3.5e-05 23_[+3]_89 chrX:9310374-9310494 3.5e-05 46_[+3]_66 chrX:5175101-5175221 3.5e-05 18_[+3]_94 chrX:10631300-10631420 3.5e-05 60_[+3]_52 chr3L:2952858-2952978 3.5e-05 44_[+3]_68 chr2L:7675211-7675331 3.5e-05 40_[+3]_72 chrX:10790576-10790696 3.5e-05 13_[+3]_99 chr2L:20534993-20535113 3.5e-05 25_[+3]_87 chrX:3139250-3139370 3.5e-05 63_[+3]_49 chr2L:16148591-16148711 3.5e-05 53_[+3]_59 chrX:12675977-12676097 3.5e-05 42_[+3]_70 chrX:17967185-17967305 3.5e-05 109_[+3]_3 chrX:1640129-1640249 3.5e-05 12_[+3]_100 chr3R:9185237-9185357 3.5e-05 33_[+3]_79 chrX:19429388-19429508 3.5e-05 101_[+3]_11 chr2R:4547361-4547481 7.3e-05 20_[+3]_92 chr3L:20203740-20203860 7.3e-05 62_[+3]_50 chrX:19021146-19021266 7.3e-05 56_[+3]_56 chr2R:19415146-19415266 7.3e-05 43_[+3]_69 chrX:15464716-15464836 7.3e-05 34_[+3]_78 chr2L:3648575-3648695 7.3e-05 83_[+3]_29 chr3R:16413899-16414019 7.3e-05 72_[+3]_40 chrX:22802715-22802835 7.3e-05 74_[+3]_38 chrX:6725295-6725415 7.3e-05 49_[+3]_63 chrX:17772815-17772935 7.3e-05 92_[+3]_20 chrX:1945352-1945472 7.3e-05 52_[+3]_60 chrX:2650829-2650949 7.3e-05 [+3]_112 chrX:8046646-8046766 7.3e-05 9_[+3]_103 chr2L:8633793-8633913 7.3e-05 68_[+3]_44 chrX:1395388-1395508 7.3e-05 54_[+3]_58 chr3L:3823103-3823223 7.3e-05 13_[+3]_99 chr2L:4075768-4075888 7.3e-05 92_[+3]_20 chrX:5365148-5365268 7.3e-05 46_[+3]_66 chr3R:17646804-17646924 0.0001 101_[+3]_11 chrX:6727282-6727402 0.0001 81_[+3]_31 chrX:21437374-21437494 0.0001 26_[+3]_86 chrX:10791128-10791248 0.0001 44_[+3]_68 chrX:5744613-5744733 0.0001 7_[+3]_105 chr3R:4870323-4870443 0.0001 67_[+3]_45 chr2L:19163296-19163416 0.00014 75_[+3]_37 chr3R:16585160-16585280 0.00014 6_[+3]_106 chr3R:31605185-31605305 0.00014 71_[+3]_41 chr2L:6656313-6656433 0.00014 89_[+3]_23 chr2R:18498608-18498728 0.00014 38_[+3]_74 chr3R:10167388-10167508 0.00014 59_[+3]_53 chr2L:9256455-9256575 0.00014 51_[+3]_61 chr3L:12687508-12687628 0.00018 49_[+3]_63 chrX:13138005-13138125 0.00018 44_[+3]_68 chrX:6979331-6979451 0.00022 14_[+3]_98 chr2R:5709734-5709854 0.00022 72_[+3]_40 chr2L:20991188-20991308 0.00022 20_[+3]_92 chrX:17733983-17734103 0.00022 45_[+3]_67 chr2R:24304660-24304780 0.00022 34_[+3]_78 chrX:3545182-3545302 0.00022 15_[+3]_97 chr3L:23206566-23206686 0.00026 95_[+3]_17 chrX:15191560-15191680 0.00026 54_[+3]_58 chr3R:4856758-4856878 0.00026 29_[+3]_83 chrX:6709372-6709492 0.00026 36_[+3]_76 chr2R:10021234-10021354 0.00026 78_[+3]_34 chr3R:19997515-19997635 0.00033 100_[+3]_12 chr3L:22199070-22199190 0.00033 9_[+3]_103 chr3R:23147004-23147124 0.00033 61_[+3]_51 chrX:17994596-17994716 0.00033 76_[+3]_36 chr2R:15164843-15164963 0.00033 99_[+3]_13 chrX:12213067-12213187 0.00033 91_[+3]_21 chrX:1483782-1483902 0.00033 109_[+3]_3 chr3L:17183963-17184083 0.00033 45_[+3]_67 chr3R:18850194-18850314 0.00033 34_[+3]_78 chrX:3995306-3995426 0.00033 30_[+3]_82 chrX:656606-656726 0.0004 45_[+3]_67 chrX:15298061-15298181 0.0004 [+3]_112 chr3L:17513642-17513762 0.0004 63_[+3]_49 chrX:3465715-3465835 0.00049 47_[+3]_65 chr3R:8914023-8914143 0.00049 8_[+3]_104 chr3L:1478925-1479045 0.00049 25_[+3]_87 chrX:2649806-2649926 0.00049 73_[+3]_39 chr3R:20080311-20080431 0.00049 38_[+3]_74 chrX:3453186-3453306 0.00056 61_[+3]_51 chr3R:29559555-29559675 0.00056 43_[+3]_69 chr3L:71430-71550 0.00056 46_[+3]_66 chrX:14892190-14892310 0.00056 [+3]_112 chrX:8624095-8624215 0.00056 49_[+3]_63 chrX:17995642-17995762 0.00056 8_[+3]_104 chrX:18248383-18248503 0.00056 107_[+3]_5 chrX:17799594-17799714 0.00056 56_[+3]_56 chr2R:24277171-24277291 0.0006 112_[+3] chrX:11386818-11386938 0.0006 67_[+3]_45 chr2R:7431904-7432024 0.0006 4_[+3]_108 chrX:17968248-17968368 0.0006 87_[+3]_25 chrX:11640592-11640712 0.0006 8_[+3]_104 chr2R:23819364-23819484 0.00064 18_[+3]_94 chr3L:17976464-17976584 0.00064 93_[+3]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTTYCRTT width=8 seqs=99 chrX:18137693-18137813 ( 65) GTTCCGTT 1 chr3R:15588999-15589119 ( 34) GTTTCGTT 1 chrX:1566858-1566978 ( 58) GTTTCGTT 1 chr2L:19137792-19137912 ( 34) GTTTCGTT 1 chrX:12297493-12297613 ( 48) GTTTCGTT 1 chr2L:9275607-9275727 ( 51) GTTTCGTT 1 chr3L:18621744-18621864 ( 19) GTTTCGTT 1 chrX:12392170-12392290 ( 24) GTTTCGTT 1 chrX:9310374-9310494 ( 47) GTTTCGTT 1 chrX:5175101-5175221 ( 19) GTTTCGTT 1 chrX:10631300-10631420 ( 61) GTTTCGTT 1 chr3L:2952858-2952978 ( 45) GTTTCGTT 1 chr2L:7675211-7675331 ( 41) GTTCCGTT 1 chrX:10790576-10790696 ( 14) GTTTCGTT 1 chr2L:20534993-20535113 ( 26) GTTCCGTT 1 chrX:3139250-3139370 ( 64) GTTTCGTT 1 chr2L:16148591-16148711 ( 54) GTTCCGTT 1 chrX:12675977-12676097 ( 43) GTTTCGTT 1 chrX:17967185-17967305 ( 110) GTTTCGTT 1 chrX:1640129-1640249 ( 13) GTTTCGTT 1 chr3R:9185237-9185357 ( 34) GTTTCGTT 1 chrX:19429388-19429508 ( 102) GTTTCGTT 1 chr2R:4547361-4547481 ( 21) GTTTCATT 1 chr3L:20203740-20203860 ( 63) GTTCCATT 1 chrX:19021146-19021266 ( 57) GTTTCATT 1 chr2R:19415146-19415266 ( 44) GTTTCATT 1 chrX:15464716-15464836 ( 35) GTTCCATT 1 chr2L:3648575-3648695 ( 84) GTTTCATT 1 chr3R:16413899-16414019 ( 73) GTTTCATT 1 chrX:22802715-22802835 ( 75) GTTTCATT 1 chrX:6725295-6725415 ( 50) GTTTCATT 1 chrX:17772815-17772935 ( 93) GTTCCATT 1 chrX:1945352-1945472 ( 53) GTTCCATT 1 chrX:2650829-2650949 ( 1) GTTTCATT 1 chrX:8046646-8046766 ( 10) GTTCCATT 1 chr2L:8633793-8633913 ( 69) GTTCCATT 1 chrX:1395388-1395508 ( 55) GTTCCATT 1 chr3L:3823103-3823223 ( 14) GTTTCATT 1 chr2L:4075768-4075888 ( 93) GTTTCATT 1 chrX:5365148-5365268 ( 47) GTTTCATT 1 chr3R:17646804-17646924 ( 102) GTTTCGCT 1 chrX:6727282-6727402 ( 82) GTTCCGCT 1 chrX:21437374-21437494 ( 27) GTTTCGCT 1 chrX:10791128-10791248 ( 45) GTTCCGCT 1 chrX:5744613-5744733 ( 8) GTTTCGCT 1 chr3R:4870323-4870443 ( 68) GTTCCGCT 1 chr2L:19163296-19163416 ( 76) GTTCCACT 1 chr3R:16585160-16585280 ( 7) GTTCCACT 1 chr3R:31605185-31605305 ( 72) GTTCCACT 1 chr2L:6656313-6656433 ( 90) GTTCCACT 1 chr2R:18498608-18498728 ( 39) GTTCCACT 1 chr3R:10167388-10167508 ( 60) GTTCCACT 1 chr2L:9256455-9256575 ( 52) GTTCCACT 1 chr3L:12687508-12687628 ( 50) TTTCCGTT 1 chrX:13138005-13138125 ( 45) TTTTCGTT 1 chrX:6979331-6979451 ( 15) TTTTCATT 1 chr2R:5709734-5709854 ( 73) TTTTCATT 1 chr2L:20991188-20991308 ( 21) TTTCCATT 1 chrX:17733983-17734103 ( 46) TTTCCATT 1 chr2R:24304660-24304780 ( 35) TTTTCATT 1 chrX:3545182-3545302 ( 16) TTTTCATT 1 chr3L:23206566-23206686 ( 96) GTTCCTTT 1 chrX:15191560-15191680 ( 55) GTTCCTTT 1 chr3R:4856758-4856878 ( 30) GTTTCTTT 1 chrX:6709372-6709492 ( 37) GTTTCTTT 1 chr2R:10021234-10021354 ( 79) GTTTCTTT 1 chr3R:19997515-19997635 ( 101) GTTCGGTT 1 chr3L:22199070-22199190 ( 10) GTTTGGTT 1 chr3R:23147004-23147124 ( 62) GTTCGGTT 1 chrX:17994596-17994716 ( 77) GTTTTGTT 1 chr2R:15164843-15164963 ( 100) GTTCGGTT 1 chrX:12213067-12213187 ( 92) GTTTTGTT 1 chrX:1483782-1483902 ( 110) GTTTTGTT 1 chr3L:17183963-17184083 ( 46) GTTCTGTT 1 chr3R:18850194-18850314 ( 35) GTTCTGTT 1 chrX:3995306-3995426 ( 31) GTTCGGTT 1 chrX:656606-656726 ( 46) GTTTCGAT 1 chrX:15298061-15298181 ( 1) GTTTCGAT 1 chr3L:17513642-17513762 ( 64) GTTCCGAT 1 chrX:3465715-3465835 ( 48) GTTCGATT 1 chr3R:8914023-8914143 ( 9) GTTTTATT 1 chr3L:1478925-1479045 ( 26) GTTCTATT 1 chrX:2649806-2649926 ( 74) GTTTTATT 1 chr3R:20080311-20080431 ( 39) GTTCGATT 1 chrX:3453186-3453306 ( 62) ATTCCATT 1 chr3R:29559555-29559675 ( 44) ATTTCATT 1 chr3L:71430-71550 ( 47) ATTCCATT 1 chrX:14892190-14892310 ( 1) ATTTCATT 1 chrX:8624095-8624215 ( 50) ATTCCATT 1 chrX:17995642-17995762 ( 9) GTTCCAAT 1 chrX:18248383-18248503 ( 108) GTTCCAAT 1 chrX:17799594-17799714 ( 57) ATTCCATT 1 chr2R:24277171-24277291 ( 113) TTTTCGCT 1 chrX:11386818-11386938 ( 68) TTTCCGCT 1 chr2R:7431904-7432024 ( 5) TTTTCGCT 1 chrX:17968248-17968368 ( 88) TTTCCGCT 1 chrX:11640592-11640712 ( 9) TTTTCGCT 1 chr2R:23819364-23819484 ( 19) TTTCCACT 1 chr3L:17976464-17976584 ( 94) TTTTCACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.7575 E= 9.4e-026 -209 -1327 176 -83 -1327 -1327 -1327 189 -1327 -1327 -1327 189 -1327 93 -1327 102 -1327 183 -172 -174 85 -1327 106 -241 -235 -24 -1327 147 -1327 -1327 -1327 189 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 99 E= 9.4e-026 0.060606 0.000000 0.787879 0.151515 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.454545 0.000000 0.545455 0.000000 0.848485 0.070707 0.080808 0.464646 0.000000 0.484848 0.050505 0.050505 0.202020 0.000000 0.747475 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTYCRTT MEME-3 regular expression -------------------------------------------------------------------------------- GTT[TC]C[GA][TC]T -------------------------------------------------------------------------------- Time 19.14 secs. ******************************************************************************** ******************************************************************************** MOTIF ARTGRAAC MEME-4 width = 8 sites = 84 llr = 658 E-value = 6.7e-026 ******************************************************************************** -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 94::4aa: pos.-specific C :13::::8 probability G 13:a6::: matrix T :28::::2 bits 2.1 * 1.9 * ** 1.7 * ** 1.5 * * ** Relative 1.3 * * *** Entropy 1.1 * ****** (11.3 bits) 0.8 * ****** 0.6 * ****** 0.4 * ****** 0.2 ******** 0.0 -------- Multilevel AATGGAAC consensus GC A sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:8118246-8118366 52 1.55e-05 GCGCCGTGTg aatggaac tcagctgaaa chrX:15189655-15189775 73 1.55e-05 aacgaatggc aatggaac gCTCAAAAGC chr3R:18699339-18699459 68 1.55e-05 CGGAATGGCA AATGGAAC ATGGTTCACA chrX:7959686-7959806 77 1.55e-05 AAGCAAACGG AATGGAAC GTGAGGAACG chr3L:13884792-13884912 37 1.55e-05 aatggtacgg aatggaac gaatcgaacg chrX:873590-873710 61 1.55e-05 ACCGAAATGG AATGGAAC GCCGACCGGA chrX:3995306-3995426 101 1.55e-05 TACGCGTGGT AATGGAAC GGCGGCGAAA chr2R:15198768-15198888 111 1.55e-05 GTTCTAAGAC AATGGAAC GT chrX:4273638-4273758 55 1.55e-05 aacgaaataa aatggaac ggaacggagt chr3R:18706428-18706548 107 1.55e-05 aacgtaacgg aatggaac AGTTAC chrX:17963147-17963267 23 1.55e-05 ACAAGTTGGG AATGGAAC GGTGGAGCGA chrX:3453725-3453845 87 2.94e-05 GGGGAATCAA AGTGGAAC GCAGAAACGG chr3R:27280798-27280918 55 2.94e-05 CAAAGTGGCA AGTGGAAC ACGCTCAATA chrX:21437374-21437494 44 2.94e-05 TAATCCggaa agtggaac ggggaagggg chrX:8140846-8140966 18 2.94e-05 gggactggga agtggaac tggaacAGTC chrX:16876574-16876694 66 2.94e-05 CTGAAAAGCC AGTGGAAC GACTGAAAGC chrX:6987190-6987310 85 2.94e-05 AACGGTTGGC AGTGGAAC AGCAGGTAAA chrX:11640592-11640712 80 2.94e-05 GGAGGTGCTA AGTGGAAC ACCAATTGGC chr2R:13908768-13908888 79 2.94e-05 ACGATATGGT AGTGGAAC AGGGAATATG chr2R:5715413-5715533 56 4.66e-05 AATGAAGCGA AATGAAAC ATTACGGCGA chr2L:16275275-16275395 84 4.66e-05 ATGAAATGGC AATGAAAC ACTCTTGGGA chr2L:17102581-17102701 76 4.66e-05 GACAAGCGGC AATGAAAC GCGACTCTGC chrX:7823081-7823201 42 4.66e-05 ACCGCCGGCA AATGAaac ggaacagaat chr2L:17165905-17166025 90 4.66e-05 GGACAAGGGA AATGAAAC GGATGTGCAG chrX:18812257-18812377 71 4.66e-05 AGTGATACGT AATGAAAC GTCGGAAATG chr2R:4547361-4547481 69 6.27e-05 TTGCACAAAA ATTGGAAC TAAATCTGAA chr2R:12755779-12755899 31 6.27e-05 CATTGGTGGG ATTGGAAC TGGTGGTCAG chr3R:28348563-28348683 71 6.27e-05 GAACGATGGC ATTGGAAC AGGACATGCC chr3R:19891432-19891552 79 6.27e-05 ttcctatccc attGGAAC CCCACGTAAA chr3R:20714553-20714673 94 6.27e-05 aacgttggag attggaac attaaaactt chr3R:13984592-13984712 27 6.27e-05 AACAGTTGAC ATTGGAAC GTCCTATCGA chr3L:20203740-20203860 52 9.19e-05 AATTATAGAC AGTGAAAC ATTGTTCCAT chr3L:20796943-20797063 85 9.19e-05 AACAAGTGGA AGTGAAAC AAAACGGTCA chr2L:18314450-18314570 94 9.19e-05 AACAAATGGT AGTGAAAC ACATTGGTAA chr2L:19141305-19141425 99 9.19e-05 GAAAGAAATA AGTGAAAC AGCATACGAG chr3R:21088686-21088806 55 9.19e-05 CGGGAGCGAG AACGGAAC GCGGTACGCG chr3R:28990237-28990357 76 9.19e-05 AACGAGTGAC AGTGAAAC ACTACACCAA chrX:18276030-18276150 48 9.19e-05 GTTACTTcgg aacggaac aaaacggaac chrX:21253358-21253478 45 9.19e-05 ACACTCGAAC AGTGAAAC ACTGAGGcac chrX:10257342-10257462 69 9.19e-05 cacgtaacgt aacggaac aaccaacgga chrX:21265367-21265487 77 9.19e-05 aacggaacga aacggaac ggaccgACCA chrX:14338311-14338431 2 9.19e-05 A AGTGAAAC AAAAACCCAA chr2L:10231630-10231750 98 1.40e-04 CAGTCTTCAA ATTGAAAC GCGGAAATGG chrX:11822032-11822152 85 1.40e-04 AACGGAACGA AATGGAAT GACCAAAAGA chr3R:8914023-8914143 62 1.40e-04 CTCAACTCGA AATGGAAT GGAATGGAAT chrX:21582217-21582337 41 1.40e-04 CGGGGGAACa aatggaat gggacgcggg chr2L:13813143-13813263 90 1.40e-04 ATAAGCGGAC ATTGAAAC CTGAAGTATT chrX:4795287-4795407 91 1.55e-04 aacagaacag aacgaaac ggatgggaag chr3R:17063721-17063841 61 1.55e-04 AAAGAATGGG AACGAAAC GGAACGGAGT chrX:10290766-10290886 75 1.55e-04 aatggtatgg aacgaaac acacacacac chr2R:9387488-9387608 88 1.55e-04 AGAATGGCGG AACGAAAC AGGCCTGGTC chr3R:15588999-15589119 83 1.85e-04 cctgggctgg agtggaat ggtacggtat chr2L:15332681-15332801 68 1.85e-04 ACAGAAACAA AGTGGAAT CGAAACAGTG chr2R:7431904-7432024 93 1.85e-04 aacggagcgg atcggaac gAGCGTCACT chr2R:13911054-13911174 107 1.85e-04 cggcgtCACG AGTGGAAT ATGGAA chr2R:10249122-10249242 59 1.85e-04 TGCGTGGACT ATCGGAAC AGCTGGGACA chr2L:219754-219874 80 1.85e-04 ACGACGTGGA ATCGGAAC ACGGAACAAC chr3R:17763737-17763857 82 1.85e-04 TCAGGGGACA AGTGGAAT CAGCTGAAGT chrX:4434634-4434754 72 1.85e-04 GGAATGGAAC ATCGGAAC GTTGGAATGA chrX:15355538-15355658 28 2.13e-04 AGCGAGTGGC AGCGAAAC GAAGCGAAAT chr3R:19997515-19997635 14 2.13e-04 ACAGAGAATA AGcgaaac gaaacgaaac chr3R:16413899-16414019 54 2.13e-04 AAAAGTGGGA ACTGGAAC AACGCCATGT chr3R:20574187-20574307 98 2.13e-04 TTCAAAATCC AGCGAAAC TGGAGTGAGA chr2R:13910326-13910446 44 2.13e-04 AAAGCTACGA ACTGGAAC AGCGGCGAAA chrX:2656153-2656273 84 2.27e-04 AACAGGCGTT GATGGAAC TGTGGAATCG chrX:17772815-17772935 65 2.27e-04 TTGGCCCATT GATGGAAC GACGGAATGA chr3R:20728081-20728201 61 2.27e-04 TCTAAGGACC GATGGAAC GTGGTGGCAG chr2R:19415146-19415266 82 2.59e-04 GGGGCCTATG AATGAAAT GTAGTATTCT chr3R:22998405-22998525 46 2.59e-04 GGAAAGGCGG AATGAAAT AGTGTAGTAG chr3L:17976464-17976584 9 2.59e-04 TGTTGtgg aatgaaat gggatggtat chr3R:21642452-21642572 83 2.59e-04 ACGAACCAGG GGTGGAAC TTGGGCGAGG chr3L:2952858-2952978 87 2.77e-04 ttcCTGTGAG ATTGGAAT TGGATTGGAA chr2R:10844007-10844127 47 3.26e-04 GCATCTCGAG AGTgaaat gaaaatgaaa chr3R:12021146-12021266 65 3.41e-04 AAATGTATGA ACTGAAAC GTAATACCAC chrX:13138005-13138125 9 3.41e-04 AGGTCACC ACTGAAAC AACAACAATT chrX:2278912-2279032 55 3.55e-04 CAGCCCGCGG AGCGGAAT GCAGTCAACG chr3L:11132211-11132331 15 3.84e-04 AATAGTGACC GATGAAAC AGTGACCGTG chr3L:73491-73611 7 3.98e-04 AAGGTT GTTGGAAC GAGACGGGGA chr3L:3942796-3942916 56 4.25e-04 TTTCTGGGAG GACGGAAC ACTTTGGAAG chrX:6727282-6727402 112 4.45e-04 GCGCTCGCTA ATTGAAAT T chr3L:17535875-17535995 25 4.73e-04 GTTTGAGCAG GGCGGAAC AATGCCGATT chrX:8080755-8080875 39 4.89e-04 GACTGCTCTT ATCGGAAT GCTACTTCTG chrX:8108041-8108161 5 4.89e-04 GACG ATCGGAAT CGAATCGGTG chr3R:18850194-18850314 84 5.35e-04 AACCAAAAAA ACCGAAAC TTATTTTTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:8118246-8118366 1.5e-05 51_[+4]_61 chrX:15189655-15189775 1.5e-05 72_[+4]_40 chr3R:18699339-18699459 1.5e-05 67_[+4]_45 chrX:7959686-7959806 1.5e-05 76_[+4]_36 chr3L:13884792-13884912 1.5e-05 36_[+4]_76 chrX:873590-873710 1.5e-05 60_[+4]_52 chrX:3995306-3995426 1.5e-05 100_[+4]_12 chr2R:15198768-15198888 1.5e-05 110_[+4]_2 chrX:4273638-4273758 1.5e-05 54_[+4]_58 chr3R:18706428-18706548 1.5e-05 106_[+4]_6 chrX:17963147-17963267 1.5e-05 22_[+4]_90 chrX:3453725-3453845 2.9e-05 86_[+4]_26 chr3R:27280798-27280918 2.9e-05 54_[+4]_58 chrX:21437374-21437494 2.9e-05 43_[+4]_69 chrX:8140846-8140966 2.9e-05 17_[+4]_95 chrX:16876574-16876694 2.9e-05 65_[+4]_47 chrX:6987190-6987310 2.9e-05 84_[+4]_28 chrX:11640592-11640712 2.9e-05 79_[+4]_33 chr2R:13908768-13908888 2.9e-05 78_[+4]_34 chr2R:5715413-5715533 4.7e-05 55_[+4]_57 chr2L:16275275-16275395 4.7e-05 83_[+4]_29 chr2L:17102581-17102701 4.7e-05 75_[+4]_37 chrX:7823081-7823201 4.7e-05 41_[+4]_71 chr2L:17165905-17166025 4.7e-05 89_[+4]_23 chrX:18812257-18812377 4.7e-05 70_[+4]_42 chr2R:4547361-4547481 6.3e-05 68_[+4]_44 chr2R:12755779-12755899 6.3e-05 30_[+4]_82 chr3R:28348563-28348683 6.3e-05 70_[+4]_42 chr3R:19891432-19891552 6.3e-05 78_[+4]_34 chr3R:20714553-20714673 6.3e-05 93_[+4]_19 chr3R:13984592-13984712 6.3e-05 26_[+4]_86 chr3L:20203740-20203860 9.2e-05 51_[+4]_61 chr3L:20796943-20797063 9.2e-05 84_[+4]_28 chr2L:18314450-18314570 9.2e-05 93_[+4]_19 chr2L:19141305-19141425 9.2e-05 98_[+4]_14 chr3R:21088686-21088806 9.2e-05 54_[+4]_58 chr3R:28990237-28990357 9.2e-05 75_[+4]_37 chrX:18276030-18276150 9.2e-05 47_[+4]_65 chrX:21253358-21253478 9.2e-05 44_[+4]_68 chrX:10257342-10257462 9.2e-05 68_[+4]_44 chrX:21265367-21265487 9.2e-05 76_[+4]_36 chrX:14338311-14338431 9.2e-05 1_[+4]_111 chr2L:10231630-10231750 0.00014 97_[+4]_15 chrX:11822032-11822152 0.00014 84_[+4]_28 chr3R:8914023-8914143 0.00014 61_[+4]_51 chrX:21582217-21582337 0.00014 40_[+4]_72 chr2L:13813143-13813263 0.00014 89_[+4]_23 chrX:4795287-4795407 0.00015 90_[+4]_22 chr3R:17063721-17063841 0.00015 60_[+4]_52 chrX:10290766-10290886 0.00015 74_[+4]_38 chr2R:9387488-9387608 0.00015 87_[+4]_25 chr3R:15588999-15589119 0.00018 82_[+4]_30 chr2L:15332681-15332801 0.00018 67_[+4]_45 chr2R:7431904-7432024 0.00018 92_[+4]_20 chr2R:13911054-13911174 0.00018 106_[+4]_6 chr2R:10249122-10249242 0.00018 58_[+4]_54 chr2L:219754-219874 0.00018 79_[+4]_33 chr3R:17763737-17763857 0.00018 81_[+4]_31 chrX:4434634-4434754 0.00018 71_[+4]_41 chrX:15355538-15355658 0.00021 27_[+4]_85 chr3R:19997515-19997635 0.00021 13_[+4]_99 chr3R:16413899-16414019 0.00021 53_[+4]_59 chr3R:20574187-20574307 0.00021 97_[+4]_15 chr2R:13910326-13910446 0.00021 43_[+4]_69 chrX:2656153-2656273 0.00023 83_[+4]_29 chrX:17772815-17772935 0.00023 64_[+4]_48 chr3R:20728081-20728201 0.00023 60_[+4]_52 chr2R:19415146-19415266 0.00026 81_[+4]_31 chr3R:22998405-22998525 0.00026 45_[+4]_67 chr3L:17976464-17976584 0.00026 8_[+4]_104 chr3R:21642452-21642572 0.00026 82_[+4]_30 chr3L:2952858-2952978 0.00028 86_[+4]_26 chr2R:10844007-10844127 0.00033 46_[+4]_66 chr3R:12021146-12021266 0.00034 64_[+4]_48 chrX:13138005-13138125 0.00034 8_[+4]_104 chrX:2278912-2279032 0.00036 54_[+4]_58 chr3L:11132211-11132331 0.00038 14_[+4]_98 chr3L:73491-73611 0.0004 6_[+4]_106 chr3L:3942796-3942916 0.00042 55_[+4]_57 chrX:6727282-6727402 0.00044 111_[+4]_1 chr3L:17535875-17535995 0.00047 24_[+4]_88 chrX:8080755-8080875 0.00049 38_[+4]_74 chrX:8108041-8108161 0.00049 4_[+4]_108 chr3R:18850194-18850314 0.00053 83_[+4]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ARTGRAAC width=8 seqs=84 chr3R:8118246-8118366 ( 52) AATGGAAC 1 chrX:15189655-15189775 ( 73) AATGGAAC 1 chr3R:18699339-18699459 ( 68) AATGGAAC 1 chrX:7959686-7959806 ( 77) AATGGAAC 1 chr3L:13884792-13884912 ( 37) AATGGAAC 1 chrX:873590-873710 ( 61) AATGGAAC 1 chrX:3995306-3995426 ( 101) AATGGAAC 1 chr2R:15198768-15198888 ( 111) AATGGAAC 1 chrX:4273638-4273758 ( 55) AATGGAAC 1 chr3R:18706428-18706548 ( 107) AATGGAAC 1 chrX:17963147-17963267 ( 23) AATGGAAC 1 chrX:3453725-3453845 ( 87) AGTGGAAC 1 chr3R:27280798-27280918 ( 55) AGTGGAAC 1 chrX:21437374-21437494 ( 44) AGTGGAAC 1 chrX:8140846-8140966 ( 18) AGTGGAAC 1 chrX:16876574-16876694 ( 66) AGTGGAAC 1 chrX:6987190-6987310 ( 85) AGTGGAAC 1 chrX:11640592-11640712 ( 80) AGTGGAAC 1 chr2R:13908768-13908888 ( 79) AGTGGAAC 1 chr2R:5715413-5715533 ( 56) AATGAAAC 1 chr2L:16275275-16275395 ( 84) AATGAAAC 1 chr2L:17102581-17102701 ( 76) AATGAAAC 1 chrX:7823081-7823201 ( 42) AATGAAAC 1 chr2L:17165905-17166025 ( 90) AATGAAAC 1 chrX:18812257-18812377 ( 71) AATGAAAC 1 chr2R:4547361-4547481 ( 69) ATTGGAAC 1 chr2R:12755779-12755899 ( 31) ATTGGAAC 1 chr3R:28348563-28348683 ( 71) ATTGGAAC 1 chr3R:19891432-19891552 ( 79) ATTGGAAC 1 chr3R:20714553-20714673 ( 94) ATTGGAAC 1 chr3R:13984592-13984712 ( 27) ATTGGAAC 1 chr3L:20203740-20203860 ( 52) AGTGAAAC 1 chr3L:20796943-20797063 ( 85) AGTGAAAC 1 chr2L:18314450-18314570 ( 94) AGTGAAAC 1 chr2L:19141305-19141425 ( 99) AGTGAAAC 1 chr3R:21088686-21088806 ( 55) AACGGAAC 1 chr3R:28990237-28990357 ( 76) AGTGAAAC 1 chrX:18276030-18276150 ( 48) AACGGAAC 1 chrX:21253358-21253478 ( 45) AGTGAAAC 1 chrX:10257342-10257462 ( 69) AACGGAAC 1 chrX:21265367-21265487 ( 77) AACGGAAC 1 chrX:14338311-14338431 ( 2) AGTGAAAC 1 chr2L:10231630-10231750 ( 98) ATTGAAAC 1 chrX:11822032-11822152 ( 85) AATGGAAT 1 chr3R:8914023-8914143 ( 62) AATGGAAT 1 chrX:21582217-21582337 ( 41) AATGGAAT 1 chr2L:13813143-13813263 ( 90) ATTGAAAC 1 chrX:4795287-4795407 ( 91) AACGAAAC 1 chr3R:17063721-17063841 ( 61) AACGAAAC 1 chrX:10290766-10290886 ( 75) AACGAAAC 1 chr2R:9387488-9387608 ( 88) AACGAAAC 1 chr3R:15588999-15589119 ( 83) AGTGGAAT 1 chr2L:15332681-15332801 ( 68) AGTGGAAT 1 chr2R:7431904-7432024 ( 93) ATCGGAAC 1 chr2R:13911054-13911174 ( 107) AGTGGAAT 1 chr2R:10249122-10249242 ( 59) ATCGGAAC 1 chr2L:219754-219874 ( 80) ATCGGAAC 1 chr3R:17763737-17763857 ( 82) AGTGGAAT 1 chrX:4434634-4434754 ( 72) ATCGGAAC 1 chrX:15355538-15355658 ( 28) AGCGAAAC 1 chr3R:19997515-19997635 ( 14) AGCGAAAC 1 chr3R:16413899-16414019 ( 54) ACTGGAAC 1 chr3R:20574187-20574307 ( 98) AGCGAAAC 1 chr2R:13910326-13910446 ( 44) ACTGGAAC 1 chrX:2656153-2656273 ( 84) GATGGAAC 1 chrX:17772815-17772935 ( 65) GATGGAAC 1 chr3R:20728081-20728201 ( 61) GATGGAAC 1 chr2R:19415146-19415266 ( 82) AATGAAAT 1 chr3R:22998405-22998525 ( 46) AATGAAAT 1 chr3L:17976464-17976584 ( 9) AATGAAAT 1 chr3R:21642452-21642572 ( 83) GGTGGAAC 1 chr3L:2952858-2952978 ( 87) ATTGGAAT 1 chr2R:10844007-10844127 ( 47) AGTGAAAT 1 chr3R:12021146-12021266 ( 65) ACTGAAAC 1 chrX:13138005-13138125 ( 9) ACTGAAAC 1 chrX:2278912-2279032 ( 55) AGCGGAAT 1 chr3L:11132211-11132331 ( 15) GATGAAAC 1 chr3L:73491-73611 ( 7) GTTGGAAC 1 chr3L:3942796-3942916 ( 56) GACGGAAC 1 chrX:6727282-6727402 ( 112) ATTGAAAT 1 chr3L:17535875-17535995 ( 25) GGCGGAAC 1 chrX:8080755-8080875 ( 39) ATCGGAAT 1 chrX:8108041-8108161 ( 5) ATCGGAAT 1 chr3R:18850194-18850314 ( 84) ACCGAAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.89693 E= 6.7e-026 181 -1304 -129 -1304 73 -201 41 -41 -1304 6 -1304 148 -1304 -1304 210 -1304 51 -1304 144 -1304 195 -1304 -1304 -1304 195 -1304 -1304 -1304 -1304 176 -1304 -50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 84 E= 6.7e-026 0.904762 0.000000 0.095238 0.000000 0.428571 0.059524 0.309524 0.202381 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.369048 0.000000 0.630952 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.809524 0.000000 0.190476 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARTGRAAC MEME-4 regular expression -------------------------------------------------------------------------------- A[AGT][TC]G[GA]AAC -------------------------------------------------------------------------------- Time 24.76 secs. ******************************************************************************** ******************************************************************************** MOTIF AACAGCTG MEME-5 width = 8 sites = 13 llr = 132 E-value = 4.4e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A a8:a:::: pos.-specific C ::a::a:: probability G :2::8::a matrix T ::::2:a: bits 2.1 * * * 1.9 * ** *** 1.7 * ** *** 1.5 * ** *** Relative 1.3 ******** Entropy 1.1 ******** (14.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AACAGCTG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:18083980-18084100 38 1.43e-05 GTTTTCAAAC AACAGCTG ACACACAAAA chr2L:3648575-3648695 47 1.43e-05 GTTCCTTCAA AACAGCTG TGCGCCGAAA chr2L:16275275-16275395 29 1.43e-05 TCGGCTGTGA AACAGCTG CCTACCAGGC chr2L:6656313-6656433 11 1.43e-05 TTATGACGAA AACAGCTG TCAGAAAAAG chrX:5744613-5744733 45 1.43e-05 TGTTGCGTGC AACAGCTG ACATTTGGAC chrX:3995306-3995426 9 1.43e-05 ATCATCAA AACAGCTG TTCGCTTGGG chr3R:29345967-29346087 27 1.43e-05 TGTTAAGCTT AACAGCTG TGAGAGTGCG chrX:17963147-17963267 46 1.43e-05 AGCGATGCGG AACAGCTG GCAGTGGAAC chrX:18137693-18137813 89 3.09e-05 TATGTTTAAC AACATCTG CTTATCGATG chr3L:3942796-3942916 80 3.09e-05 GAAGCGGCAC AACATCTG TTATTCAAAG chrX:21582217-21582337 2 3.09e-05 A AACATCTG GCGCTTTTAC chrX:6979331-6979451 61 4.38e-05 GGTTTTGGTT AGCAGCTG GTCTCCAGAG chr3R:16585160-16585280 31 4.38e-05 CTGTTCCAGC AGCAGCTG ATGCTTATTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:18083980-18084100 1.4e-05 37_[+5]_75 chr2L:3648575-3648695 1.4e-05 46_[+5]_66 chr2L:16275275-16275395 1.4e-05 28_[+5]_84 chr2L:6656313-6656433 1.4e-05 10_[+5]_102 chrX:5744613-5744733 1.4e-05 44_[+5]_68 chrX:3995306-3995426 1.4e-05 8_[+5]_104 chr3R:29345967-29346087 1.4e-05 26_[+5]_86 chrX:17963147-17963267 1.4e-05 45_[+5]_67 chrX:18137693-18137813 3.1e-05 88_[+5]_24 chr3L:3942796-3942916 3.1e-05 79_[+5]_33 chrX:21582217-21582337 3.1e-05 1_[+5]_111 chrX:6979331-6979451 4.4e-05 60_[+5]_52 chr3R:16585160-16585280 4.4e-05 30_[+5]_82 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AACAGCTG width=8 seqs=13 chrX:18083980-18084100 ( 38) AACAGCTG 1 chr2L:3648575-3648695 ( 47) AACAGCTG 1 chr2L:16275275-16275395 ( 29) AACAGCTG 1 chr2L:6656313-6656433 ( 11) AACAGCTG 1 chrX:5744613-5744733 ( 45) AACAGCTG 1 chrX:3995306-3995426 ( 9) AACAGCTG 1 chr3R:29345967-29346087 ( 27) AACAGCTG 1 chrX:17963147-17963267 ( 46) AACAGCTG 1 chrX:18137693-18137813 ( 89) AACATCTG 1 chr3L:3942796-3942916 ( 80) AACATCTG 1 chrX:21582217-21582337 ( 2) AACATCTG 1 chrX:6979331-6979451 ( 61) AGCAGCTG 1 chr3R:16585160-16585280 ( 31) AGCAGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.6156 E= 4.4e+003 195 -1035 -1035 -1035 171 -1035 -60 -1035 -1035 206 -1035 -1035 195 -1035 -1035 -1035 -1035 -1035 172 -22 -1035 206 -1035 -1035 -1035 -1035 -1035 189 -1035 -1035 210 -1035 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 13 E= 4.4e+003 1.000000 0.000000 0.000000 0.000000 0.846154 0.000000 0.153846 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.769231 0.230769 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCTG MEME-5 regular expression -------------------------------------------------------------------------------- AACA[GT]CTG -------------------------------------------------------------------------------- Time 30.22 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:17963147-17963267 5.11e-05 22_[+4(1.55e-05)]_15_[+5(1.43e-05)]_\ 2_[+4(2.94e-05)]_28_[+1(2.55e-05)]_21 chr3R:18706428-18706548 1.16e-06 44_[+3(3.45e-05)]_37_[+1(2.55e-05)]_\ 9_[+4(1.55e-05)]_6 chrX:16874828-16874948 2.15e-02 50_[+1(6.73e-05)]_62 chr3R:20728081-20728201 1.14e-01 120 chrX:5365148-5365268 2.05e-02 30_[+3(3.45e-05)]_8_[+3(7.27e-05)]_\ 66 chr3L:17535875-17535995 4.19e-02 65_[+1(2.55e-05)]_47 chrX:19429388-19429508 3.03e-03 58_[+2(1.48e-05)]_37_[+2(3.15e-05)]_\ 9 chrX:3159776-3159896 3.87e-02 68_[+2(4.78e-05)]_44 chr2R:10021234-10021354 4.11e-03 66_[+2(3.15e-05)]_46 chrX:2651298-2651418 4.17e-03 80_[+1(2.55e-05)]_32 chr3R:9185237-9185357 1.33e-02 33_[+3(3.45e-05)]_20_[+2(6.45e-05)]_\ 8_[+2(8.29e-05)]_7_[+2(4.78e-05)]_20 chrX:4434634-4434754 6.61e-04 63_[+4(1.55e-05)]_49 chr2L:9256455-9256575 1.50e-01 120 chrX:1640129-1640249 2.71e-03 7_[+3(3.45e-05)]_12_[+3(3.45e-05)]_\ 7_[+3(7.27e-05)]_70 chr3R:4870323-4870443 4.82e-04 55_[+2(4.78e-05)]_57 chrX:17967185-17967305 2.20e-02 87_[+3(3.45e-05)]_14_[+3(3.45e-05)]_\ 3 chrX:14338311-14338431 6.94e-03 1_[+4(9.19e-05)]_39_[+1(1.21e-05)]_\ 7_[+1(2.55e-05)]_49 chrX:6709372-6709492 1.73e-02 66_[+2(4.78e-05)]_1_[+2(3.15e-05)]_\ 37 chr2R:13910326-13910446 8.31e-03 120 chrX:12675977-12676097 2.37e-05 27_[+3(3.45e-05)]_7_[+3(3.45e-05)]_\ 22_[+1(6.73e-05)]_40 chr3R:29345967-29346087 2.46e-02 26_[+5(1.43e-05)]_86 chr3R:10167388-10167508 2.26e-03 120 chr2R:9387488-9387608 6.94e-03 34_[+1(6.73e-05)]_1_[+1(1.21e-05)]_\ 34_[+1(3.89e-05)]_27 chrX:3545182-3545302 8.87e-03 94_[+2(4.78e-05)]_18 chr2R:24304660-24304780 1.35e-04 28_[+3(3.45e-05)]_84 chrX:4273638-4273758 3.52e-03 42_[+1(5.37e-05)]_7_[+1(1.21e-05)]_\ 12_[+1(8.24e-05)]_35 chrX:17799594-17799714 1.69e-04 28_[+2(4.78e-05)]_7_[+2(8.29e-05)]_\ 2_[+2(8.29e-05)]_59 chr2L:16148591-16148711 3.63e-04 27_[+2(4.78e-05)]_15_[+2(1.48e-05)]_\ 2_[+2(1.48e-05)]_52 chrX:13138005-13138125 2.09e-04 60_[+2(4.78e-05)]_52 chrX:7316354-7316474 2.23e-02 54_[+2(4.78e-05)]_58 chr2L:4075768-4075888 4.52e-04 63_[+2(1.48e-05)]_18_[+2(6.45e-05)]_\ 2_[+2(4.78e-05)]_13 chr3R:20080311-20080431 2.43e-02 64_[+3(7.27e-05)]_48 chr2R:13908768-13908888 3.97e-03 78_[+4(2.94e-05)]_34 chr2L:3018300-3018420 3.72e-01 120 chr3L:3823103-3823223 1.44e-03 13_[+3(7.27e-05)]_15_[+2(4.78e-05)]_\ 76 chr2R:15198768-15198888 2.11e-04 72_[+2(8.29e-05)]_30_[+4(1.55e-05)]_\ 2 chrX:10387072-10387192 2.82e-03 62_[+1(1.21e-05)]_50 chrX:3995306-3995426 6.04e-06 8_[+5(1.43e-05)]_46_[+1(6.73e-05)]_\ 30_[+4(1.55e-05)]_12 chr2L:19159969-19160089 6.85e-03 120 chrX:873590-873710 6.12e-03 60_[+4(1.55e-05)]_23_[+1(3.89e-05)]_\ 21 chrX:5744613-5744733 5.34e-06 44_[+5(1.43e-05)]_68 chrX:21265367-21265487 1.97e-04 64_[+1(1.21e-05)]_7_[+1(1.21e-05)]_\ 33 chrX:10791128-10791248 2.93e-02 52_[+3(7.27e-05)]_60 chrX:10257342-10257462 7.29e-04 42_[+1(3.89e-05)]_18_[+4(9.19e-05)]_\ 7_[+1(1.21e-05)]_10_[+4(9.19e-05)]_11 chr3R:18850194-18850314 1.01e-01 120 chr3R:20574187-20574307 8.65e-03 120 chr2L:1529623-1529743 4.45e-03 80_[+1(1.21e-05)]_32 chrX:10290766-10290886 5.77e-03 52_[+1(1.21e-05)]_12_[+1(3.89e-05)]_\ 40 chrX:1395388-1395508 6.23e-03 51_[+2(1.48e-05)]_2_[+2(1.48e-05)]_\ [+3(3.45e-05)]_43 chrX:18248383-18248503 3.26e-03 17_[+2(1.48e-05)]_95 chrX:3139250-3139370 3.34e-03 55_[+2(1.48e-05)]_2_[+2(3.15e-05)]_\ 47 chr3R:4840887-4841007 2.69e-02 9_[+2(1.48e-05)]_103 chr2L:8633793-8633913 1.08e-03 29_[+2(1.48e-05)]_9_[+2(1.48e-05)]_\ 11_[+2(1.48e-05)]_47 chrX:2649806-2649926 1.31e-02 65_[+2(4.78e-05)]_47 chr3L:20767392-20767512 1.94e-03 28_[+4(6.27e-05)]_84 chr3R:12857693-12857813 1.33e-01 120 chr2L:20534993-20535113 2.51e-03 27_[+2(1.48e-05)]_2_[+2(6.45e-05)]_\ 2_[+2(1.48e-05)]_65 chr3R:17763737-17763857 4.06e-03 96_[+4(9.19e-05)]_16 chrX:8046646-8046766 9.80e-03 11_[+2(4.78e-05)]_2_[+2(3.15e-05)]_\ 91 chrX:11695925-11696045 1.60e-02 52_[+1(2.55e-05)]_32_[+1(5.37e-05)]_\ 20 chrX:18812257-18812377 3.91e-03 70_[+4(4.66e-05)]_6_[+4(4.66e-05)]_\ 28 chrX:10790576-10790696 8.90e-03 13_[+3(3.45e-05)]_37_[+3(3.45e-05)]_\ 4_[+2(3.15e-05)]_42 chrX:11640592-11640712 4.51e-04 20_[+3(7.27e-05)]_51_[+4(2.94e-05)]_\ 33 chr2L:17165905-17166025 6.91e-03 43_[+1(6.73e-05)]_6_[+1(2.55e-05)]_\ 27_[+1(2.55e-05)]_20 chrX:7823081-7823201 1.43e-03 44_[+1(2.55e-05)]_7_[+1(1.21e-05)]_\ 53 chr2L:13813143-13813263 8.29e-03 120 chrX:2650829-2650949 1.30e-02 [+3(7.27e-05)]_112 chr3L:13884792-13884912 5.74e-05 19_[+1(1.21e-05)]_9_[+4(1.55e-05)]_\ 76 chr3L:17183963-17184083 6.20e-03 52_[+2(1.48e-05)]_2_[+2(1.48e-05)]_\ 50 chrX:1945352-1945472 3.51e-03 33_[+2(1.48e-05)]_13_[+2(4.78e-05)]_\ 58 chr3R:17063721-17063841 2.18e-05 21_[+3(3.45e-05)]_39_[+1(1.21e-05)]_\ 44 chr2L:219754-219874 9.56e-02 120 chr3R:28735659-28735779 1.33e-01 64_[+1(8.24e-05)]_48 chrX:13248668-13248788 7.33e-02 102_[+4(9.19e-05)]_10 chrX:17968248-17968368 4.46e-04 [+1(2.55e-05)]_112 chr3L:4619592-4619712 6.76e-03 40_[+1(1.21e-05)]_72 chr2R:10249122-10249242 6.28e-05 37_[+4(2.94e-05)]_18_[+5(1.43e-05)]_\ 49 chrX:19432137-19432257 1.91e-01 120 chr3R:21642452-21642572 1.59e-03 66_[+4(2.94e-05)]_46 chrX:1483782-1483902 2.34e-02 120 chrX:8108041-8108161 3.83e-02 120 chrX:10290120-10290240 3.38e-01 120 chr2L:7675211-7675331 1.71e-02 40_[+3(3.45e-05)]_72 chrX:17772815-17772935 5.28e-05 30_[+2(1.48e-05)]_56_[+2(4.78e-05)]_\ 18 chr2R:13911054-13911174 5.78e-02 120 chrX:6979924-6980044 2.43e-01 120 chrX:12213067-12213187 6.11e-03 60_[+2(6.45e-05)]_52 chrX:17995642-17995762 2.46e-02 120 chrX:21582217-21582337 5.91e-05 1_[+5(3.09e-05)]_48_[+1(1.21e-05)]_\ 55 chrX:8080755-8080875 5.05e-03 120 chrX:11981741-11981861 1.76e-01 120 chrX:6987190-6987310 7.53e-05 49_[+1(2.55e-05)]_27_[+4(2.94e-05)]_\ 28 chr3L:3942796-3942916 1.46e-02 79_[+5(3.09e-05)]_33 chr2R:13342928-13343048 6.24e-01 120 chr3L:13803390-13803510 1.16e-02 62_[+1(3.89e-05)]_2_[+1(8.24e-05)]_\ 40 chrX:21253358-21253478 2.64e-02 6_[+4(9.19e-05)]_4_[+4(9.19e-05)]_\ 18_[+4(9.19e-05)]_68 chrX:18276030-18276150 4.32e-05 45_[+1(1.21e-05)]_7_[+1(1.21e-05)]_\ 52 chr2R:18498608-18498728 3.44e-02 51_[+2(6.45e-05)]_61 chrX:17733983-17734103 9.38e-04 52_[+2(8.29e-05)]_17_[+3(3.45e-05)]_\ 35 chrX:8624095-8624215 6.41e-03 77_[+3(7.27e-05)]_35 chr2L:6656313-6656433 8.25e-04 10_[+5(1.43e-05)]_102 chr3R:13984592-13984712 2.30e-03 26_[+4(6.27e-05)]_86 chr3L:14600689-14600809 5.29e-02 120 chr3R:28417970-28418090 3.87e-02 120 chr2R:7431904-7432024 1.85e-04 75_[+1(1.21e-05)]_37 chr2L:20733164-20733284 1.98e-01 120 chr3L:2952858-2952978 1.47e-04 39_[+3(3.45e-05)]_73 chrX:16876574-16876694 2.21e-03 65_[+4(2.94e-05)]_20_[+1(5.37e-05)]_\ 19 chr2R:15164843-15164963 2.12e-01 120 chr2R:10383581-10383701 6.68e-01 120 chrX:8140846-8140966 7.36e-03 17_[+4(2.94e-05)]_95 chrX:6725295-6725415 5.25e-03 49_[+3(7.27e-05)]_10_[+2(1.48e-05)]_\ 45 chrX:2656153-2656273 8.54e-03 120 chrX:14892190-14892310 3.97e-02 20_[+3(7.27e-05)]_92 chr3R:12021146-12021266 7.17e-03 47_[+1(6.73e-05)]_55_[+1(5.37e-05)]_\ 2 chrX:4284262-4284382 1.25e-02 74_[+2(4.78e-05)]_38 chrX:22802715-22802835 2.32e-03 24_[+2(3.15e-05)]_14_[+2(1.48e-05)]_\ 20_[+3(7.27e-05)]_38 chr2L:483437-483557 2.51e-03 40_[+1(1.21e-05)]_72 chr3L:12687508-12687628 1.06e-02 58_[+2(1.48e-05)]_54 chr3R:4856758-4856878 5.30e-02 120 chrX:2278912-2279032 2.96e-03 71_[+1(1.21e-05)]_41 chr3L:71430-71550 1.81e-01 120 chr3R:18573017-18573137 5.14e-03 120 chr3L:19237915-19238035 4.06e-01 120 chr2L:17102581-17102701 1.74e-02 45_[+4(6.27e-05)]_22_[+4(4.66e-05)]_\ 37 chr3R:28990237-28990357 2.82e-02 75_[+4(9.19e-05)]_37 chrX:21437374-21437494 2.62e-04 14_[+1(5.37e-05)]_21_[+4(2.94e-05)]_\ 69 chrX:10631300-10631420 4.26e-03 47_[+2(1.48e-05)]_5_[+3(3.45e-05)]_\ 41_[+2(3.15e-05)]_3 chr3R:15434813-15434933 2.53e-02 120 chr3R:8529221-8529341 6.08e-01 120 chr2L:16275275-16275395 1.77e-04 28_[+5(1.43e-05)]_47_[+4(4.66e-05)]_\ 29 chrX:12670593-12670713 5.00e-03 29_[+4(4.66e-05)]_83 chrX:7959686-7959806 1.60e-03 55_[+1(1.21e-05)]_13_[+4(1.55e-05)]_\ 36 chrX:17994596-17994716 8.33e-03 41_[+3(7.27e-05)]_71 chr2R:24455150-24455270 2.54e-02 95_[+1(1.21e-05)]_17 chr3R:21088686-21088806 1.50e-02 13_[+4(9.19e-05)]_33_[+4(9.19e-05)]_\ 58 chrX:4795287-4795407 1.80e-03 73_[+1(1.21e-05)]_12_[+1(2.55e-05)]_\ 19 chr3R:20714553-20714673 1.80e-04 55_[+2(3.15e-05)]_[+1(3.89e-05)]_22_\ [+4(6.27e-05)]_19 chr3R:29559555-29559675 1.70e-04 58_[+3(3.45e-05)]_54 chr3L:17976464-17976584 3.71e-03 31_[+1(8.24e-05)]_81 chr3R:23147004-23147124 7.71e-04 80_[+1(1.21e-05)]_32 chrX:15191560-15191680 3.38e-02 120 chr3R:19891432-19891552 1.87e-03 78_[+4(6.27e-05)]_34 chr3R:18699339-18699459 5.52e-02 67_[+4(1.55e-05)]_45 chr3R:15435014-15435134 4.78e-03 120 chr2R:6602539-6602659 9.48e-05 82_[+3(7.27e-05)]_30 chr3L:1478925-1479045 5.07e-03 37_[+2(8.29e-05)]_75 chrX:6727282-6727402 6.68e-05 [+4(2.94e-05)]_61_[+2(4.78e-05)]_43 chr3L:5079180-5079300 3.72e-06 43_[+2(1.48e-05)]_50_[+1(1.21e-05)]_\ 11 chr3R:16413899-16414019 7.49e-03 72_[+3(7.27e-05)]_40 chrX:15769589-15769709 1.99e-01 120 chrX:1483583-1483703 2.89e-02 9_[+2(4.78e-05)]_103 chr3L:11132211-11132331 6.15e-02 62_[+1(5.37e-05)]_50 chrX:5175101-5175221 3.01e-03 [+2(1.48e-05)]_[+3(3.45e-05)]_2_\ [+3(3.45e-05)]_41_[+2(1.48e-05)]_2_[+2(1.48e-05)]_2_[+2(3.15e-05)]_25 chr3L:13840899-13841019 3.70e-02 120 chr3L:73491-73611 7.22e-02 36_[+1(6.73e-05)]_76 chr2L:19141305-19141425 3.87e-05 2_[+2(3.15e-05)]_88_[+4(9.19e-05)]_\ 14 chr3L:11135023-11135143 2.62e-01 120 chrX:3453186-3453306 3.31e-02 38_[+2(4.78e-05)]_2_[+2(4.78e-05)]_\ 2_[+2(4.78e-05)]_54 chr3R:22998405-22998525 9.67e-04 7_[+1(1.21e-05)]_105 chrX:9310374-9310494 8.11e-03 36_[+3(3.45e-05)]_2_[+3(3.45e-05)]_\ 66 chr2R:10844007-10844127 3.87e-03 57_[+4(4.66e-05)]_25_[+1(8.24e-05)]_\ 22 chr3R:31605185-31605305 2.17e-03 120 chr3R:4865384-4865504 3.37e-02 120 chr2L:10209072-10209192 4.40e-04 56_[+1(1.21e-05)]_56 chr3R:14329303-14329423 1.10e-01 120 chr2L:18314450-18314570 2.88e-02 93_[+4(9.19e-05)]_19 chr3L:1097675-1097795 1.68e-01 120 chr2R:24975331-24975451 2.80e-01 120 chr2L:3648575-3648695 2.45e-05 33_[+2(3.15e-05)]_5_[+5(1.43e-05)]_\ 29_[+3(7.27e-05)]_29 chrX:12392170-12392290 4.71e-03 2_[+2(1.48e-05)]_13_[+3(3.45e-05)]_\ 89 chr3L:18621744-18621864 2.74e-03 18_[+3(3.45e-05)]_43_[+2(1.48e-05)]_\ 43 chrX:18083980-18084100 3.29e-05 37_[+5(1.43e-05)]_35_[+1(1.21e-05)]_\ 32 chr3L:20796943-20797063 3.27e-02 84_[+4(9.19e-05)]_9_[+4(9.19e-05)]_\ 11 chr2R:11999214-11999334 4.51e-01 120 chr2R:23754309-23754429 3.42e-03 58_[+1(2.55e-05)]_54 chr2L:9275607-9275727 5.66e-03 13_[+2(6.45e-05)]_16_[+2(1.48e-05)]_\ 5_[+3(3.45e-05)]_62 chr3R:28348563-28348683 7.21e-03 70_[+4(6.27e-05)]_42 chr2L:10372411-10372531 6.68e-02 31_[+2(6.45e-05)]_81 chrX:15189655-15189775 3.25e-03 32_[+4(1.55e-05)]_15_[+1(5.37e-05)]_\ 9_[+4(1.55e-05)]_40 chr3L:17513642-17513762 1.66e-01 120 chrX:10865699-10865819 6.93e-01 120 chr3L:22199070-22199190 4.38e-02 120 chr3R:8914023-8914143 3.38e-03 64_[+1(6.73e-05)]_48 chr3L:23206566-23206686 1.11e-03 69_[+1(1.21e-05)]_43 chr2L:15332681-15332801 7.09e-02 120 chr3R:24065905-24066025 1.68e-02 104_[+2(4.78e-05)]_8 chr2R:5360111-5360231 8.01e-02 120 chrX:11822032-11822152 4.73e-03 72_[+1(2.55e-05)]_2_[+1(8.24e-05)]_\ 30 chr3R:27280798-27280918 3.96e-02 54_[+4(2.94e-05)]_58 chr2L:10333239-10333359 1.49e-02 120 chr3L:641507-641627 2.15e-02 120 chr2L:20991188-20991308 2.65e-02 22_[+2(4.78e-05)]_2_[+2(4.78e-05)]_\ 80 chrX:1234806-1234926 3.40e-01 120 chr3L:10525677-10525797 8.24e-02 74_[+5(5.87e-05)]_38 chrX:15464716-15464836 3.00e-02 34_[+3(7.27e-05)]_78 chr3R:26552293-26552413 1.63e-01 120 chr3R:16585160-16585280 2.72e-04 30_[+5(4.38e-05)]_32_[+2(3.15e-05)]_\ 42 chr2R:23819364-23819484 1.57e-02 32_[+2(6.45e-05)]_80 chr2L:17130868-17130988 5.80e-02 120 chrX:12297493-12297613 6.41e-03 15_[+2(1.48e-05)]_24_[+3(3.45e-05)]_\ 5_[+2(3.15e-05)]_7_[+2(3.15e-05)]_37 chr2L:19137792-19137912 1.94e-03 33_[+3(3.45e-05)]_79 chr2R:19415146-19415266 1.27e-03 43_[+3(7.27e-05)]_69 chr2R:5709734-5709854 5.67e-02 120 chr2R:5715413-5715533 2.44e-02 55_[+4(4.66e-05)]_57 chr3R:19997515-19997635 3.31e-04 16_[+1(5.37e-05)]_2_[+1(5.37e-05)]_\ 86 chrX:1281261-1281381 4.15e-01 120 chrX:18137896-18138016 1.01e-01 120 chr3L:1940212-1940332 7.37e-03 51_[+2(4.78e-05)]_61 chr2L:16972807-16972927 1.92e-02 120 chrX:1566858-1566978 5.65e-03 5_[+2(4.78e-05)]_29_[+3(3.45e-05)]_\ 2_[+3(3.45e-05)]_9_[+2(1.48e-05)]_[+3(3.45e-05)]_35 chrX:19021146-19021266 4.24e-03 56_[+3(7.27e-05)]_56 chrX:3465715-3465835 1.80e-01 120 chr4:1234882-1235002 6.95e-02 75_[+1(8.24e-05)]_37 chr2R:24802602-24802722 4.90e-05 48_[+1(1.21e-05)]_44_[+2(6.45e-05)]_\ 12 chr3R:8118246-8118366 1.06e-03 51_[+4(1.55e-05)]_25_[+1(1.21e-05)]_\ 28 chr2L:3646215-3646335 1.20e-03 63_[+2(1.48e-05)]_49 chr3L:19235425-19235545 1.59e-02 94_[+4(9.19e-05)]_18 chr3L:1538724-1538844 8.77e-02 120 chr2R:12263394-12263514 5.70e-03 62_[+3(7.27e-05)]_50 chrX:11386818-11386938 3.32e-02 120 chrX:4707329-4707449 2.93e-03 5_[+4(1.55e-05)]_107 chr3R:29069330-29069450 1.09e-01 41_[+2(6.45e-05)]_71 chrX:15355538-15355658 1.09e-03 30_[+1(5.37e-05)]_7_[+1(1.21e-05)]_\ 67 chr2R:12755779-12755899 3.90e-02 30_[+4(6.27e-05)]_82 chr2L:13227019-13227139 7.58e-03 76_[+2(3.15e-05)]_36 chrX:15298061-15298181 3.25e-01 120 chr3L:20310461-20310581 1.22e-02 68_[+2(3.15e-05)]_44 chr3R:24893935-24894055 4.54e-03 88_[+4(1.55e-05)]_24 chr3R:15588999-15589119 1.49e-04 11_[+3(7.27e-05)]_14_[+3(3.45e-05)]_\ 79 chrX:18137693-18137813 2.03e-04 35_[+2(3.15e-05)]_21_[+3(3.45e-05)]_\ 16_[+5(3.09e-05)]_24 chr3L:10288286-10288406 5.54e-02 120 chr2R:4225051-4225171 1.53e-01 120 chr2L:19163296-19163416 2.05e-01 120 chrX:3453725-3453845 1.54e-03 42_[+1(3.89e-05)]_7_[+1(3.89e-05)]_\ 21_[+4(2.94e-05)]_26 chr3L:20203740-20203860 7.10e-04 51_[+4(9.19e-05)]_3_[+3(7.27e-05)]_\ 50 chr2L:12174663-12174783 1.53e-01 120 chrX:6979331-6979451 4.15e-03 60_[+5(4.38e-05)]_52 chr2R:4547361-4547481 7.62e-03 20_[+3(7.27e-05)]_40_[+4(6.27e-05)]_\ 44 chrX:19151964-19152084 2.93e-02 120 chr3R:17646804-17646924 4.76e-03 120 chr2R:24255322-24255442 6.15e-04 45_[+2(1.48e-05)]_[+3(3.45e-05)]_59 chrX:656606-656726 4.67e-02 120 chr3L:18866044-18866164 9.85e-02 120 chr3R:23057432-23057552 2.90e-02 64_[+1(6.73e-05)]_48 chr2R:10125571-10125691 2.03e-04 19_[+3(3.45e-05)]_93 chr2L:19136443-19136563 9.92e-02 120 chr2R:24277171-24277291 2.81e-01 120 chr2L:10231630-10231750 4.63e-03 110_[+4(1.55e-05)]_2 chr2L:16279006-16279126 5.78e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n09.farnam.hpc.yale.internal ********************************************************************************