******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/ovo.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:17694672-17694792 1.0000 120 chr2L:16041866-16041986 1.0000 120 chrX:14193152-14193272 1.0000 120 chrX:3374408-3374528 1.0000 120 chrX:3775272-3775392 1.0000 120 chr3L:2378248-2378368 1.0000 120 chr3L:7979878-7979998 1.0000 120 chrX:1454941-1455061 1.0000 120 chr3R:14663411-14663531 1.0000 120 chrX:14221297-14221417 1.0000 120 chrX:5734971-5735091 1.0000 120 chr3L:7935548-7935668 1.0000 120 chr2L:9734884-9735004 1.0000 120 chr2L:7969487-7969607 1.0000 120 chrX:13373999-13374119 1.0000 120 chr2R:20998815-20998935 1.0000 120 chr3L:7650393-7650513 1.0000 120 chrX:3867915-3868035 1.0000 120 chrX:5064081-5064201 1.0000 120 chrX:18835440-18835560 1.0000 120 chr3R:8261413-8261533 1.0000 120 chrX:19573818-19573938 1.0000 120 chrX:15045706-15045826 1.0000 120 chr3L:18071374-18071494 1.0000 120 chrX:13735447-13735567 1.0000 120 chr3R:16287966-16288086 1.0000 120 chrX:10889839-10889959 1.0000 120 chrX:1047067-1047187 1.0000 120 chrX:7137710-7137830 1.0000 120 chr2L:15271454-15271574 1.0000 120 chrX:14832044-14832164 1.0000 120 chrX:19260559-19260679 1.0000 120 chrX:11894364-11894484 1.0000 120 chr2R:10569412-10569532 1.0000 120 chr2R:7782073-7782193 1.0000 120 chr2L:10987160-10987280 1.0000 120 chr3R:15993924-15994044 1.0000 120 chr2R:12981492-12981612 1.0000 120 chrX:3382252-3382372 1.0000 120 chr3L:18044427-18044547 1.0000 120 chrX:154295-154415 1.0000 120 chr3R:15289983-15290103 1.0000 120 chrX:4119751-4119871 1.0000 120 chr3R:9704343-9704463 1.0000 120 chr2R:14871551-14871671 1.0000 120 chrX:8490410-8490530 1.0000 120 chr3R:8934970-8935090 1.0000 120 chr3R:7913854-7913974 1.0000 120 chrX:14225798-14225918 1.0000 120 chr2L:4982212-4982332 1.0000 120 chrX:3688437-3688557 1.0000 120 chrX:10890902-10891022 1.0000 120 chrX:8046671-8046791 1.0000 120 chrX:14833013-14833133 1.0000 120 chrX:1341669-1341789 1.0000 120 chrX:1041503-1041623 1.0000 120 chrX:9601436-9601556 1.0000 120 chr2R:5702457-5702577 1.0000 120 chr3L:19790096-19790216 1.0000 120 chr2R:17850209-17850329 1.0000 120 chr2L:20761139-20761259 1.0000 120 chr3L:9504679-9504799 1.0000 120 chrX:2685684-2685804 1.0000 120 chr2R:24790162-24790282 1.0000 120 chr2L:6611525-6611645 1.0000 120 chr2R:23632821-23632941 1.0000 120 chr3R:31711759-31711879 1.0000 120 chr2R:7786338-7786458 1.0000 120 chr2R:10416902-10417022 1.0000 120 chr2L:13204281-13204401 1.0000 120 chrX:3369593-3369713 1.0000 120 chr3L:3338593-3338713 1.0000 120 chr3R:20960115-20960235 1.0000 120 chr3R:30782686-30782806 1.0000 120 chrX:15063120-15063240 1.0000 120 chr3L:1537501-1537621 1.0000 120 chr3R:29139109-29139229 1.0000 120 chrX:2076286-2076406 1.0000 120 chr2R:21161120-21161240 1.0000 120 chrX:5893770-5893890 1.0000 120 chr3R:27926082-27926202 1.0000 120 chr3R:26979134-26979254 1.0000 120 chr3R:13305103-13305223 1.0000 120 chrX:15306100-15306220 1.0000 120 chr2L:16276310-16276430 1.0000 120 chr2R:12034809-12034929 1.0000 120 chr3R:22727605-22727725 1.0000 120 chr3L:9396140-9396260 1.0000 120 chr2L:13779697-13779817 1.0000 120 chr3R:11947662-11947782 1.0000 120 chr3L:11938853-11938973 1.0000 120 chr3R:9929297-9929417 1.0000 120 chrX:22515208-22515328 1.0000 120 chrX:16569518-16569638 1.0000 120 chr2L:2888183-2888303 1.0000 120 chrX:15075608-15075728 1.0000 120 chrX:470727-470847 1.0000 120 chr3L:18950470-18950590 1.0000 120 chrX:5964320-5964440 1.0000 120 chr2R:14295707-14295827 1.0000 120 chr2R:11105692-11105812 1.0000 120 chr3R:13971532-13971652 1.0000 120 chrX:9395011-9395131 1.0000 120 chr2L:7809023-7809143 1.0000 120 chrX:8489395-8489515 1.0000 120 chr2L:3348626-3348746 1.0000 120 chr3R:29158287-29158407 1.0000 120 chr3L:18819011-18819131 1.0000 120 chr3R:16095037-16095157 1.0000 120 chrX:12905805-12905925 1.0000 120 chrX:19608632-19608752 1.0000 120 chr2R:22373015-22373135 1.0000 120 chr2L:14221348-14221468 1.0000 120 chrX:3373811-3373931 1.0000 120 chr2R:22806351-22806471 1.0000 120 chrX:1904092-1904212 1.0000 120 chr3R:16625781-16625901 1.0000 120 chr2L:20061739-20061859 1.0000 120 chrX:5063270-5063390 1.0000 120 chr2L:21238198-21238318 1.0000 120 chrX:22480703-22480823 1.0000 120 chrX:1321824-1321944 1.0000 120 chr2R:6631824-6631944 1.0000 120 chr2R:1081383-1081503 1.0000 120 chr3R:14060033-14060153 1.0000 120 chr2R:21183922-21184042 1.0000 120 chr2R:7767675-7767795 1.0000 120 chrX:17102239-17102359 1.0000 120 chr3R:5658973-5659093 1.0000 120 chr3L:7806917-7807037 1.0000 120 chrX:19148962-19149082 1.0000 120 chrX:13752762-13752882 1.0000 120 chrX:4677858-4677978 1.0000 120 chr2L:21220572-21220692 1.0000 120 chr3L:18627520-18627640 1.0000 120 chr3R:29766248-29766368 1.0000 120 chr2R:11660721-11660841 1.0000 120 chr2R:17843298-17843418 1.0000 120 chr2R:6647975-6648095 1.0000 120 chr2R:10777052-10777172 1.0000 120 chr3L:8684838-8684958 1.0000 120 chrX:21120330-21120450 1.0000 120 chr3R:9532572-9532692 1.0000 120 chrX:11679327-11679447 1.0000 120 chr2R:22941029-22941149 1.0000 120 chrX:16694673-16694793 1.0000 120 chr2L:16530821-16530941 1.0000 120 chr3L:15108610-15108730 1.0000 120 chrX:2298110-2298230 1.0000 120 chr3R:24925376-24925496 1.0000 120 chrX:19475023-19475143 1.0000 120 chrX:10070678-10070798 1.0000 120 chrX:12463993-12464113 1.0000 120 chr3R:21853026-21853146 1.0000 120 chrX:927631-927751 1.0000 120 chrX:18374785-18374905 1.0000 120 chrX:10325373-10325493 1.0000 120 chrX:19259931-19260051 1.0000 120 chr3L:12179052-12179172 1.0000 120 chrX:9465920-9466040 1.0000 120 chr2R:5413443-5413563 1.0000 120 chrX:2738847-2738967 1.0000 120 chr3L:6976066-6976186 1.0000 120 chr3R:29868464-29868584 1.0000 120 chr2R:16730620-16730740 1.0000 120 chr2L:11001297-11001417 1.0000 120 chr3L:8412890-8413010 1.0000 120 chr2R:22645805-22645925 1.0000 120 chr2R:15930913-15931033 1.0000 120 chr2R:20670485-20670605 1.0000 120 chrX:21311769-21311889 1.0000 120 chr2L:19571070-19571190 1.0000 120 chr2R:22925844-22925964 1.0000 120 chr2L:1118662-1118782 1.0000 120 chr3L:9974605-9974725 1.0000 120 chr2L:7000709-7000829 1.0000 120 chrX:5056137-5056257 1.0000 120 chrX:9464101-9464221 1.0000 120 chrX:1276220-1276340 1.0000 120 chr3R:14739960-14740080 1.0000 120 chr3R:24860543-24860663 1.0000 120 chr3R:21141443-21141563 1.0000 120 chr3R:30296945-30297065 1.0000 120 chrX:17627308-17627428 1.0000 120 chrX:11682247-11682367 1.0000 120 chr2R:21549404-21549524 1.0000 120 chr2R:10104095-10104215 1.0000 120 chr2R:5421033-5421153 1.0000 120 chrX:5061899-5062019 1.0000 120 chr2R:19300129-19300249 1.0000 120 chr3R:13729041-13729161 1.0000 120 chrX:12012619-12012739 1.0000 120 chr3L:3461671-3461791 1.0000 120 chr2L:7050872-7050992 1.0000 120 chr3R:27111773-27111893 1.0000 120 chr2R:16582795-16582915 1.0000 120 chrX:278933-279053 1.0000 120 chrX:12718686-12718806 1.0000 120 chrX:6727211-6727331 1.0000 120 chr2R:21664921-21665041 1.0000 120 chr2L:1157285-1157405 1.0000 120 chr3R:14736800-14736920 1.0000 120 chr2R:6971040-6971160 1.0000 120 chr3R:25056905-25057025 1.0000 120 chrX:7959514-7959634 1.0000 120 chrX:8093385-8093505 1.0000 120 chr3L:7834146-7834266 1.0000 120 chr2L:8433759-8433879 1.0000 120 chr3L:12203908-12204028 1.0000 120 chr2R:19450687-19450807 1.0000 120 chr3R:15901099-15901219 1.0000 120 chrX:11325772-11325892 1.0000 120 chr3L:8997298-8997418 1.0000 120 chr3L:16680614-16680734 1.0000 120 chrX:11805150-11805270 1.0000 120 chr3R:20714445-20714565 1.0000 120 chrX:4937386-4937506 1.0000 120 chr3R:27928207-27928327 1.0000 120 chr2R:18811485-18811605 1.0000 120 chrX:3448425-3448545 1.0000 120 chrX:9599196-9599316 1.0000 120 chr2R:10535538-10535658 1.0000 120 chrX:21520657-21520777 1.0000 120 chr3R:20958927-20959047 1.0000 120 chr3R:8892631-8892751 1.0000 120 chrX:16893163-16893283 1.0000 120 chrX:20251720-20251840 1.0000 120 chr3L:20827982-20828102 1.0000 120 chr2L:481496-481616 1.0000 120 chr3L:18046102-18046222 1.0000 120 chrX:1620042-1620162 1.0000 120 chr3L:11276114-11276234 1.0000 120 chr2L:7038963-7039083 1.0000 120 chr2L:5006491-5006611 1.0000 120 chr2R:7257934-7258054 1.0000 120 chr2L:13094076-13094196 1.0000 120 chr3L:9374493-9374613 1.0000 120 chr3L:2418520-2418640 1.0000 120 chrX:15333744-15333864 1.0000 120 chrX:619700-619820 1.0000 120 chr2L:17496966-17497086 1.0000 120 chrX:1275007-1275127 1.0000 120 chrX:12721400-12721520 1.0000 120 chrX:11426132-11426252 1.0000 120 chrX:4679012-4679132 1.0000 120 chrX:21375234-21375354 1.0000 120 chr2L:4185370-4185490 1.0000 120 chr2L:19530299-19530419 1.0000 120 chrX:10772443-10772563 1.0000 120 chrX:11453853-11453973 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_ovo/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/ovo.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.276 C 0.226 G 0.222 T 0.277 Background letter frequencies (from file dataset with add-one prior applied): A 0.276 C 0.226 G 0.222 T 0.277 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TACCGTTA MEME-1 width = 8 sites = 194 llr = 1331 E-value = 1.4e-097 ******************************************************************************** -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2831::18 pos.-specific C 1179:::: probability G :1::a3:1 matrix T 71:::791 bits 2.2 * 2.0 * 1.7 ** 1.5 ** * Relative 1.3 *** * Entropy 1.1 *** * (9.9 bits) 0.9 ******* 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TACCGTTA consensus A G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:17496966-17497086 38 1.84e-05 TCGCACAGTT TACCGTTA GTGGGAAAAA chr2L:7038963-7039083 52 1.84e-05 GCCAAACTAT TACCGTTA GCCGGCGGTT chr2L:481496-481616 47 1.84e-05 TGGGCCGATA TACCGTTA CCGCACCCCT chr3R:20714445-20714565 32 1.84e-05 cacTGTTAGC TACCGTTA TGTGCCGTCG chrX:11805150-11805270 75 1.84e-05 TGTTAACATG TACCGTTA GCTGTGCCAC chrX:7959514-7959634 68 1.84e-05 GAATGCTCTT TACCGTTA GAAATGCAGG chr3R:21141443-21141563 41 1.84e-05 TGGTCATATG TACCGTTA GCCGGCTGTT chr3R:29868464-29868584 66 1.84e-05 CAGTTATTTT TACCGTTA TTCAGCTGTA chrX:10325373-10325493 64 1.84e-05 TATTACGGAA TACCGTTA GCTGGCCAAA chr3R:21853026-21853146 80 1.84e-05 GTAGTGCGTT TACCGTTA TCATTATAAG chr3R:29766248-29766368 69 1.84e-05 ACGCCTCGTT TACCGTTA CCCGGCCACT chr2L:21220572-21220692 69 1.84e-05 ATGCCATATA TACCGTTA AATCATTTGT chrX:22480703-22480823 63 1.84e-05 ACAATTACTT TACCGTTA TGCCAGGTTC chr2L:21238198-21238318 64 1.84e-05 ATGAGTAATT TACCGTTA TTAATTCACA chr2R:22373015-22373135 48 1.84e-05 AGCTGGCGTT TACCGTTA TTTGCTCCGC chr3R:9929297-9929417 66 1.84e-05 TTCCCCCGAA TACCGTTA TATAGCCGGC chr3L:11938853-11938973 54 1.84e-05 AGTGCTGCGG TACCGTTA CTTTATAACG chr3R:22727605-22727725 53 1.84e-05 TGCCTGCCGT TACCGTTA CGTTCTATAT chrX:15306100-15306220 30 1.84e-05 CCATAGAGAA TACCGTTA GGTGGCGGTA chr2R:21161120-21161240 37 1.84e-05 GGATATTAGG TACCGTTA GTCACCAAAT chrX:15063120-15063240 64 1.84e-05 tgttgccgtc taccgtta cAACGTTATG chr2R:10416902-10417022 39 1.84e-05 GAGGACCGTT TACCGTTA TGTTTCGACC chr2R:7786338-7786458 43 1.84e-05 TGGGAGCTTA TACCGTTA TAAAGCCAAC chr2R:24790162-24790282 26 1.84e-05 CATTACCAAT TACCGTTA CCCACTCAGT chrX:8046671-8046791 27 1.84e-05 CCGTTAGTTA TACCGTTA CTTCTACaga chr2L:4982212-4982332 50 1.84e-05 CACCCCACAG TACCGTTA TTCCACCTGT chrX:14225798-14225918 57 1.84e-05 AGAAAACCAG TACCGTTA CTTGCGGACT chr2R:7782073-7782193 57 1.84e-05 ATTGCTCGGT TACCGTTA CTTTTCGTCT chrX:19260559-19260679 41 1.84e-05 GCTACATCGT TACCGTTA TGGGCAATGC chrX:13735447-13735567 81 1.84e-05 AAAACTCAAG TACCGTTA GCCGATCCTG chrX:15045706-15045826 37 1.84e-05 TCATTAAGTT TACCGTTA ATGCCATTCG chrX:18835440-18835560 87 1.84e-05 TCCCGAGGAG TACCGTTA CAAGGCGAGC chrX:3867915-3868035 80 1.84e-05 TGTCCGTTTT TACCGTTA GTTATTTCAC chrX:14221297-14221417 49 1.84e-05 CTATCGTAAT TACCGTTA ACGCCCACCT chr3L:2378248-2378368 39 1.84e-05 CATCAAAACT TACCGTTA TAAGTTAAGC chrX:10772443-10772563 60 7.38e-05 GCGTGCGGTT AACCGTTA GCCTGCAGCG chrX:1620042-1620162 38 7.38e-05 TCCCTCCTCC AACCGTTA AGTGCTTACA chr2L:1157285-1157405 43 7.38e-05 GCAGCTGAGG AACCGTTA TTCCCGCTGC chrX:278933-279053 106 7.38e-05 AGCCAGCAAG AACCGTTA GCTCAGA chr2R:10104095-10104215 56 7.38e-05 CACAGCCGAG AACCGTTA GGCGAGAACG chrX:2738847-2738967 80 7.38e-05 CCTTTGAACT AACCGTTA TCTTATTTAC chrX:18374785-18374905 71 7.38e-05 ACAGTACTTT AACCGTTA ATCAAAAGCT chr2R:6647975-6648095 65 7.38e-05 GTTATTTCGA AACCGTTA CCGCGAACCG chrX:1904092-1904212 29 7.38e-05 CATATCAGAA AACCGTTA GAGGTGATGG chrX:2685684-2685804 48 7.38e-05 ACCAGAAACA AACCGTTA TTCTTTGGTG chrX:8490410-8490530 83 7.38e-05 CAAATCGATA AACCGTTA ATCAAGTTTG chrX:3382252-3382372 59 7.38e-05 CGAGCGGAAT AACCGTTA GTAAAACTAT chr2R:12981492-12981612 56 7.38e-05 TTGGCGAATT AACCGTTA GACTGCTCTA chrX:13373999-13374119 86 7.38e-05 GATTTCATTC AACCGTTA GACGTCCGCC chr3L:7935548-7935668 64 7.38e-05 GTCACGCGTT AACCGTTA TGCAGGCAAT chrX:1454941-1455061 73 7.38e-05 GATCAAGGTA AACCGTTA GTTTGGAATA chrX:3775272-3775392 40 7.38e-05 TTGGCAAGGC AACCGTTA GCTTGCATTT chr2R:7767675-7767795 73 8.85e-05 AAATACAATG TACCGTTG CTTTATTGAG chr3R:13305103-13305223 31 8.85e-05 ATCAATCAGA TACCGTTG AGTCCGCTCC chrX:14832044-14832164 46 8.85e-05 AGCTGCTTTT TACCGTTG CAAAGCGCGT chr2L:4185370-4185490 60 1.04e-04 CTAACAGCAT CACCGTTA CTTGTGTAAC chrX:12718686-12718806 50 1.04e-04 TGCACACATG CACCGTTA TCCGTTATAT chrX:1276220-1276340 10 1.04e-04 TAAGGAAGC CACCGTTA TCCGTTATCG chr3L:6976066-6976186 55 1.04e-04 TTTATCAATG CACCGTTA GCTGTGCCAT chrX:12463993-12464113 59 1.04e-04 CCTCGAAATG CACCGTTA GCCGCGAAAT chrX:2298110-2298230 23 1.04e-04 CCATGAAAAG CACCGTTA ATTGAGTGGG chr3L:15108610-15108730 68 1.04e-04 AATTGCAATT CACCGTTA GCTGAGCGGA chrX:8489395-8489515 78 1.04e-04 CCGCACCTAG CACCGTTA CACGAAGAAT chr2L:16276310-16276430 24 1.04e-04 CTCTGACGTG CACCGTTA TGTGCGTGTG chr3L:3338593-3338713 68 1.04e-04 CATGCTGCAG CACCGTTA AGCGTGAAAG chr3R:8934970-8935090 40 1.04e-04 GCAAACTGCT CACCGTTA CTTCTGTTGC chr2R:14871551-14871671 75 1.04e-04 TAACTTGAAT CACCGTTA AAAGCTCGTC chrX:17694672-17694792 58 1.04e-04 TCGGTAACTG CACCGTTA GTTTGTTACA chr3L:20827982-20828102 62 1.21e-04 CTACACGGCA TAACGGTA TCGCCCACCC chrX:9599196-9599316 19 1.21e-04 TTGCCAGAGA TAACGGTA GACGCCAGCT chrX:4937386-4937506 47 1.21e-04 TTCGCTCTCA TAACGGTA TCTGcataca chrX:12012619-12012739 89 1.21e-04 TTTTTGAATG TAACGGTA GTTCGGCAAC chrX:11682247-11682367 68 1.21e-04 CCCACAAAGG TAACGGTA AAACCGACAA chrX:927631-927751 54 1.21e-04 CGAACCATTA TAACGGTA GAAACTGTTA chr2L:16530821-16530941 74 1.21e-04 GGATGAATCA TAACGGTA AACTCGCGCA chr2R:22941029-22941149 80 1.21e-04 AGTGTAACGG TAACGGTA AATTGACTAA chrX:1321824-1321944 44 1.21e-04 TCACAAACAG TAACGGTA AACAGGAGCT chr3R:29158287-29158407 56 1.21e-04 CTCGCGCAAA TAACGGTA AATGTGGATA chr2L:3348626-3348746 72 1.21e-04 ACTGCTCGCC TAACGGTA GATAAAACCC chr2L:2888183-2888303 52 1.21e-04 CGTCGAATAA TAACGGTA AAGATGTAGT chrX:22515208-22515328 76 1.21e-04 TGTCTTCGAG TAACGGTA CCGTGTGTGA chr2L:13779697-13779817 48 1.21e-04 TGAATTTTCC TAACGGTA AAGGTATATC chr2R:12034809-12034929 43 1.21e-04 ACGCTTAGCT TAACGGTA TTTAGCACTG chr3R:29139109-29139229 30 1.21e-04 CGCGCCAGCG TAACGGTA AAGGTGCGAA chr3L:1537501-1537621 75 1.21e-04 CGCGAGCGCA TAACGGTA CATGTATaca chr2L:13204281-13204401 91 1.21e-04 TACTCACCGC TAACGGTA AAGTGAGTCA chrX:9601436-9601556 62 1.21e-04 CACAACCACT TAACGGTA AAGGGGTATG chrX:3688437-3688557 54 1.21e-04 TTAATAATTC TAACGGTA AATAGTGAGC chr3R:9704343-9704463 54 1.21e-04 CGGGACGCCC TAACGGTA TCGTGTGTAA chr3R:15289983-15290103 17 1.21e-04 CTGGAATATC TAACGGTA CTCGCCGGCC chrX:7137710-7137830 86 1.21e-04 CCGAAATGTG TAACGGTA AACTGTTACG chr3R:16287966-16288086 32 1.21e-04 CAGCCCCGAG TAACGGTA CAACTATCAT chr3R:20958927-20959047 63 1.36e-04 CATTGCCATG TGCCGTTA TTCGGCATCC chr2L:7000709-7000829 60 1.36e-04 GGCGCAAGGT TGCCGTTA TTGCCTAGTA chr2R:1081383-1081503 44 1.36e-04 CTTGGTTAGC TGCCGTTA GATGTTTGTC chrX:15075608-15075728 41 1.36e-04 TCTCTATATG TGCCGTTA GGCGCGCCAA chr3R:11947662-11947782 40 1.36e-04 CCTCGCAAAG TGCCGTTA TTCATTGACG chrX:3369593-3369713 36 1.36e-04 CAATCTAGTG TGCCGTTA TAAAATCGCC chr2R:5702457-5702577 46 1.36e-04 ACTTTCAAAG TGCCGTTA AAGCTGTTCC chrX:10889839-10889959 43 1.36e-04 CATAACTGGT TGCCGTTA TTTGCGCTGA chr2L:19530299-19530419 16 1.66e-04 GTTGCATGAT AACCGGTA CTCTTAGTTT chrX:619700-619820 57 1.66e-04 TGTTGTTGAG TCCCGTTA TTTCGCAGAC chr2R:6971040-6971160 61 1.66e-04 GGGTGTATTC TCCCGTTA TTCCCCTCTA chr3R:27111773-27111893 66 1.66e-04 TTGGCCGTTG TCCCGTTA ATTGATTAAA chr2R:6631824-6631944 57 1.66e-04 TGCCGCTATT TCCCGTTA CTACCACCTA chrX:1041503-1041623 3 1.66e-04 TG TCCCGTTA GGACCACACT chr2R:10569412-10569532 74 1.66e-04 TCCCACCTGA TCCCGTTA GTTGTGTAGA chr2L:16041866-16041986 36 1.66e-04 AAGCTCCGTT TCCCGTTA TAAAGCTATT chr3R:15901099-15901219 29 2.37e-04 GTATTTACAG TTCCGTTA GTCGTGCGCT chr2L:19571070-19571190 78 2.37e-04 TTATTAAAAT TTCCGTTA TAAAAATTAA chrX:9465920-9466040 39 2.37e-04 TTTCACTTTT TACCGTTT TGCACTCACT chr2R:11660721-11660841 20 2.37e-04 CATTTCAGAG TTCCGTTA TTTTGCATTT chrX:19148962-19149082 41 2.37e-04 AACACTCAAG TTCCGTTA TGATTTTTAC chrX:17102239-17102359 84 2.37e-04 AGAACGCAAG TACCGTTT AAGCTTTTCT chr2R:14295707-14295827 73 2.37e-04 TTCGTTTGGT TTCCGTTA ATTTCTCGTG chrX:5964320-5964440 64 2.37e-04 GTTGTTGTTA TTCCGTTA CAGTGGAATA chr3R:20960115-20960235 105 2.37e-04 AATGTGTGCA TACCGTTT TGTTCTAT chrX:1341669-1341789 35 2.37e-04 TGATCCTCTT TTCCGTTA TGTACAGCAC chr3L:18071374-18071494 55 2.37e-04 AAAAGAAATT TACCGTTT GATATCGGCC chr3R:14663411-14663531 94 2.37e-04 AGTTTTCGAT TACCGTTT TGTTAACCTT chr3L:16680614-16680734 41 2.64e-04 ACCACCAACT GACCGTTA TTAAGAGAAC chrX:154295-154415 75 2.64e-04 GGTAATTGCG GACCGTTA TAATACAACC chr2L:7969487-7969607 45 2.64e-04 ggggTTTGAA GACCGTTA AGCAAATAGG chrX:21375234-21375354 68 3.34e-04 cggttacatt tacagtta caTAAACGGG chrX:5064081-5064201 66 3.34e-04 CACCCACGAC TACAGTTA GAATTAGAAT chr3L:7650393-7650513 93 3.34e-04 GGCAATTGAT TACAGTTA GTTCTTGCTC chr3L:18950470-18950590 21 3.80e-04 TGGCTATTGC TACCGCTA TTCTCTGTTT chr2L:10987160-10987280 44 3.80e-04 GAATTTGCTT TACCGCTA TGATTTTTTT chr2L:1118662-1118782 83 3.94e-04 CATTAACATT AACCGTTG GCAATTGTTT chr3L:7806917-7807037 87 3.94e-04 AGATACAAAC AACCGTTG TCCGTCGTCA chr3L:2418520-2418640 9 4.78e-04 ATCCGTAT AAACGGTA AAATTGAAAG chrX:5056137-5056257 78 4.78e-04 gaaaaaaaTC TACCGGTT TTCAAGGTTA chr3R:25056905-25057025 107 5.05e-04 GGTGCAAATA AGCCGTTA GTATGT chr2R:21664921-21665041 76 5.46e-04 GTTTGCCATT CACCGTTG TTCCCATTGT chrX:3374408-3374528 27 5.46e-04 CGTACTTGTT TACCGGAA TGCAACGGAT chr3L:8412890-8413010 62 6.24e-04 TCGTTTCGGT TAACGGTG TCTGTTCGAA chr2R:16730620-16730740 41 6.24e-04 CGGCCCAAGC TAACGGTG CACGAGCACC chr2R:22806351-22806471 23 6.24e-04 GAGTACTAAT TAACGGTG CAAGCACCGC chrX:3373811-3373931 35 6.24e-04 GCTTAACTTT TAACGGTG CTCTCACACA chr2L:7809023-7809143 39 6.24e-04 GATAATATTC TAACGGTG AAGAGTGAAT chr3R:26979134-26979254 62 6.24e-04 CTTGTTTATC TAACGGTG GCGAAGACCT chrX:14193152-14193272 39 6.24e-04 CACTCCGAAA TAACGGTG CTTTTCCAAA chrX:11453853-11453973 58 6.83e-04 AGCAACAAAT TGCCGTTG TTTATCGTTT chr3L:11276114-11276234 70 6.83e-04 GGAGACCAGA TGCCGTTG GGACGGGTTA chr2R:22925844-22925964 49 6.83e-04 TGTCGCAAAG TACCGTTC ACTTGTGCGC chr3R:14736800-14736920 51 7.78e-04 CTACGTGCTA TAACGTAA CCGAATCCGA chr2R:16582795-16582915 31 7.78e-04 CGCATTTATT TCCCGTTG TAAGCATTTT chr2R:5413443-5413563 56 7.78e-04 TACAATAAAG ATCCGTTA TATTTCGTTT chrX:19475023-19475143 58 7.78e-04 CTGAGGTAAG ATCCGTTA GCCCCATTCG chr3R:27926082-27926202 67 7.78e-04 GAGTAAGAAG CGCCGTTA TTTTTAGAGG chr2L:5006491-5006611 28 8.32e-04 CACAAATGTG TAAAGTTA AAATGTGACG chrX:21311769-21311889 7 8.32e-04 ACAAAT CCCCGTTA GCATTAAGCA chrX:470727-470847 21 8.32e-04 GTAGTCAAAA TAAAGTTA CATTTCAGGC chr2R:19300129-19300249 50 8.84e-04 CGTTCAGTCA TAACGCTA CAGCCAGAGC chrX:5061899-5062019 21 8.84e-04 CAGGCGGCAA AACCGTAA AAAAAAAAAA chrX:2076286-2076406 75 8.84e-04 TGTGGAAGGC AACCGTAA ATTAACTTTG chr2L:8433759-8433879 30 9.51e-04 ACCGCCCTTT AACAGTTA TTCAATTTGT chr2R:15930913-15931033 14 9.51e-04 ATTGCTAAAC AAACGTTG TGTACGGATA chr3L:18627520-18627640 40 9.51e-04 GAGTGTAAAC AACAGTTA AATGTTGTTT chrX:4679012-4679132 15 1.03e-03 TCGTTCGACT CTCCGTTA TGCTGCATCC chrX:10890902-10891022 109 1.03e-03 GCTGCCCGCT AACCGCTA tttc chr3R:27928207-27928327 27 1.08e-03 GTCTGTAATC TAACGGTT TTTATCCTTT chr3L:12203908-12204028 69 1.08e-03 ccgattcgGC TAACGGTT TCACTGCGCA chr2R:20670485-20670605 50 1.08e-03 AAGCTACAAC TAACGGTT TTCTTCCAGT chr2R:20998815-20998935 65 1.08e-03 CTGCCCCCTA TAACGGTT CACCCATCCG chr2R:7257934-7258054 43 1.18e-03 GTGATTCTTC GAACGGTA ATTTCATCAA chr2L:11001297-11001417 81 1.18e-03 TTACACAAAT TACAGTTG CACTTTCTTA chr3R:30782686-30782806 10 1.18e-03 TCAACGGCT GAACGGTA AACAACACAC chr3R:7913854-7913974 77 1.18e-03 TTAAAAAATG TGCCGTTT ATTCATATAA chr3L:7834146-7834266 41 1.34e-03 ACCAACTAAT TACCGCTG CGTCATTCCC chr3R:13729041-13729161 97 1.34e-03 TAAAAAAAAG TAACGGAA TTGCGGGCAT chr3R:14739960-14740080 57 1.34e-03 CTCGCAAAAG TAACGGAA GCGATGACTG chr3L:12179052-12179172 79 1.34e-03 TGAACTAAAC TAACGGAA ACTTCAAAAG chrX:11679327-11679447 24 1.34e-03 CCAACTAAAC TAACGGAA CAGTGCGTCG chr3R:16625781-16625901 17 1.34e-03 CTATGTGACA TAACGGAA CTCTGGGCAA chrX:5893770-5893890 112 1.34e-03 AGCTATTTAT ACACGTTA C chr2L:6611525-6611645 65 1.34e-03 GCCCCTGTTC TAACGGAA CTTCTTGCAC chr3L:9504679-9504799 92 1.34e-03 TGCACGCGTG TCCCGTTT TTTTTTTTTT chr2L:20761139-20761259 43 1.34e-03 GATAAGCAGG TAACGGAA CTCGTGTCCG chr2L:9734884-9735004 11 1.34e-03 TTTGCTCTAT AACCGGTT TCAGACAGAC chr3R:24860543-24860663 58 1.41e-03 TCACACCGCA GCCCGTTA TTTCATCCGA chr3L:8684838-8684958 26 1.49e-03 AACGGAGCAT TGACGTTG ACGCAACTGT chrX:19608632-19608752 113 1.49e-03 GTCAATCAAA TCCCGTAA chrX:12905805-12905925 42 1.49e-03 GAATCGCACA TGCAGTTA TTCCAGGAGC chrX:3448425-3448545 14 1.66e-03 ACTGAAGGAA AAACGGTG TGGGGGGGGG chr3R:31711759-31711879 20 1.66e-03 TCTCAAATAA TGCCGCTA AGCCAGCAAC chr2L:15271454-15271574 75 1.66e-03 CGCGTAAAAG AAACGGTG AAAAAAACTC chrX:1047067-1047187 40 1.66e-03 GAGCTTTTGA TCCAGTTA TTATTGTAAT chr2R:19450687-19450807 11 1.77e-03 ACGTTCTGCG AACCGTTC AACGACGACC chr3R:13971532-13971652 59 1.77e-03 GGTTCTCAAG GTCCGTTA TTCCGCACAG chr2R:21183922-21184042 3 2.01e-03 AG TTCAGTTA GTATTCTGGG chrX:5063270-5063390 87 2.19e-03 TGCGCAATAA GACAGTTA GAATTTATGC chrX:17627308-17627428 68 2.31e-03 GCGGGTTAAT CACCGTTC CTTCGCTCAG chr3L:18044427-18044547 51 2.44e-03 CACTCATACG CCCCGTTG CAACTGTAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:17496966-17497086 1.8e-05 37_[+1]_75 chr2L:7038963-7039083 1.8e-05 51_[+1]_61 chr2L:481496-481616 1.8e-05 46_[+1]_66 chr3R:20714445-20714565 1.8e-05 31_[+1]_81 chrX:11805150-11805270 1.8e-05 74_[+1]_38 chrX:7959514-7959634 1.8e-05 67_[+1]_45 chr3R:21141443-21141563 1.8e-05 40_[+1]_72 chr3R:29868464-29868584 1.8e-05 65_[+1]_47 chrX:10325373-10325493 1.8e-05 63_[+1]_49 chr3R:21853026-21853146 1.8e-05 79_[+1]_33 chr3R:29766248-29766368 1.8e-05 68_[+1]_44 chr2L:21220572-21220692 1.8e-05 68_[+1]_44 chrX:22480703-22480823 1.8e-05 62_[+1]_50 chr2L:21238198-21238318 1.8e-05 63_[+1]_49 chr2R:22373015-22373135 1.8e-05 47_[+1]_65 chr3R:9929297-9929417 1.8e-05 65_[+1]_47 chr3L:11938853-11938973 1.8e-05 53_[+1]_59 chr3R:22727605-22727725 1.8e-05 52_[+1]_60 chrX:15306100-15306220 1.8e-05 29_[+1]_83 chr2R:21161120-21161240 1.8e-05 36_[+1]_76 chrX:15063120-15063240 1.8e-05 63_[+1]_49 chr2R:10416902-10417022 1.8e-05 38_[+1]_74 chr2R:7786338-7786458 1.8e-05 42_[+1]_70 chr2R:24790162-24790282 1.8e-05 25_[+1]_87 chrX:8046671-8046791 1.8e-05 26_[+1]_86 chr2L:4982212-4982332 1.8e-05 49_[+1]_63 chrX:14225798-14225918 1.8e-05 56_[+1]_56 chr2R:7782073-7782193 1.8e-05 56_[+1]_56 chrX:19260559-19260679 1.8e-05 40_[+1]_72 chrX:13735447-13735567 1.8e-05 80_[+1]_32 chrX:15045706-15045826 1.8e-05 36_[+1]_76 chrX:18835440-18835560 1.8e-05 86_[+1]_26 chrX:3867915-3868035 1.8e-05 79_[+1]_33 chrX:14221297-14221417 1.8e-05 48_[+1]_64 chr3L:2378248-2378368 1.8e-05 38_[+1]_74 chrX:10772443-10772563 7.4e-05 59_[+1]_53 chrX:1620042-1620162 7.4e-05 37_[+1]_75 chr2L:1157285-1157405 7.4e-05 42_[+1]_70 chrX:278933-279053 7.4e-05 105_[+1]_7 chr2R:10104095-10104215 7.4e-05 55_[+1]_57 chrX:2738847-2738967 7.4e-05 79_[+1]_33 chrX:18374785-18374905 7.4e-05 70_[+1]_42 chr2R:6647975-6648095 7.4e-05 64_[+1]_48 chrX:1904092-1904212 7.4e-05 28_[+1]_84 chrX:2685684-2685804 7.4e-05 47_[+1]_65 chrX:8490410-8490530 7.4e-05 82_[+1]_30 chrX:3382252-3382372 7.4e-05 58_[+1]_54 chr2R:12981492-12981612 7.4e-05 55_[+1]_57 chrX:13373999-13374119 7.4e-05 85_[+1]_27 chr3L:7935548-7935668 7.4e-05 63_[+1]_49 chrX:1454941-1455061 7.4e-05 72_[+1]_40 chrX:3775272-3775392 7.4e-05 39_[+1]_73 chr2R:7767675-7767795 8.9e-05 72_[+1]_40 chr3R:13305103-13305223 8.9e-05 30_[+1]_82 chrX:14832044-14832164 8.9e-05 45_[+1]_67 chr2L:4185370-4185490 0.0001 59_[+1]_53 chrX:12718686-12718806 0.0001 49_[+1]_63 chrX:1276220-1276340 0.0001 9_[+1]_103 chr3L:6976066-6976186 0.0001 54_[+1]_58 chrX:12463993-12464113 0.0001 58_[+1]_54 chrX:2298110-2298230 0.0001 22_[+1]_90 chr3L:15108610-15108730 0.0001 67_[+1]_45 chrX:8489395-8489515 0.0001 77_[+1]_35 chr2L:16276310-16276430 0.0001 23_[+1]_89 chr3L:3338593-3338713 0.0001 67_[+1]_45 chr3R:8934970-8935090 0.0001 39_[+1]_73 chr2R:14871551-14871671 0.0001 74_[+1]_38 chrX:17694672-17694792 0.0001 57_[+1]_55 chr3L:20827982-20828102 0.00012 61_[+1]_51 chrX:9599196-9599316 0.00012 18_[+1]_94 chrX:4937386-4937506 0.00012 46_[+1]_66 chrX:12012619-12012739 0.00012 88_[+1]_24 chrX:11682247-11682367 0.00012 67_[+1]_45 chrX:927631-927751 0.00012 53_[+1]_59 chr2L:16530821-16530941 0.00012 73_[+1]_39 chr2R:22941029-22941149 0.00012 79_[+1]_33 chrX:1321824-1321944 0.00012 43_[+1]_69 chr3R:29158287-29158407 0.00012 55_[+1]_57 chr2L:3348626-3348746 0.00012 71_[+1]_41 chr2L:2888183-2888303 0.00012 51_[+1]_61 chrX:22515208-22515328 0.00012 75_[+1]_37 chr2L:13779697-13779817 0.00012 47_[+1]_65 chr2R:12034809-12034929 0.00012 42_[+1]_70 chr3R:29139109-29139229 0.00012 29_[+1]_83 chr3L:1537501-1537621 0.00012 74_[+1]_38 chr2L:13204281-13204401 0.00012 90_[+1]_22 chrX:9601436-9601556 0.00012 61_[+1]_51 chrX:3688437-3688557 0.00012 53_[+1]_59 chr3R:9704343-9704463 0.00012 53_[+1]_59 chr3R:15289983-15290103 0.00012 16_[+1]_96 chrX:7137710-7137830 0.00012 85_[+1]_27 chr3R:16287966-16288086 0.00012 31_[+1]_81 chr3R:20958927-20959047 0.00014 62_[+1]_50 chr2L:7000709-7000829 0.00014 59_[+1]_53 chr2R:1081383-1081503 0.00014 43_[+1]_69 chrX:15075608-15075728 0.00014 40_[+1]_72 chr3R:11947662-11947782 0.00014 39_[+1]_73 chrX:3369593-3369713 0.00014 35_[+1]_77 chr2R:5702457-5702577 0.00014 45_[+1]_67 chrX:10889839-10889959 0.00014 42_[+1]_70 chr2L:19530299-19530419 0.00017 15_[+1]_97 chrX:619700-619820 0.00017 56_[+1]_56 chr2R:6971040-6971160 0.00017 60_[+1]_52 chr3R:27111773-27111893 0.00017 65_[+1]_47 chr2R:6631824-6631944 0.00017 56_[+1]_56 chrX:1041503-1041623 0.00017 2_[+1]_110 chr2R:10569412-10569532 0.00017 73_[+1]_39 chr2L:16041866-16041986 0.00017 35_[+1]_77 chr3R:15901099-15901219 0.00024 28_[+1]_84 chr2L:19571070-19571190 0.00024 77_[+1]_35 chrX:9465920-9466040 0.00024 38_[+1]_74 chr2R:11660721-11660841 0.00024 19_[+1]_93 chrX:19148962-19149082 0.00024 40_[+1]_72 chrX:17102239-17102359 0.00024 83_[+1]_29 chr2R:14295707-14295827 0.00024 72_[+1]_40 chrX:5964320-5964440 0.00024 63_[+1]_49 chr3R:20960115-20960235 0.00024 104_[+1]_8 chrX:1341669-1341789 0.00024 34_[+1]_78 chr3L:18071374-18071494 0.00024 54_[+1]_58 chr3R:14663411-14663531 0.00024 93_[+1]_19 chr3L:16680614-16680734 0.00026 40_[+1]_72 chrX:154295-154415 0.00026 74_[+1]_38 chr2L:7969487-7969607 0.00026 44_[+1]_68 chrX:21375234-21375354 0.00033 67_[+1]_45 chrX:5064081-5064201 0.00033 65_[+1]_47 chr3L:7650393-7650513 0.00033 92_[+1]_20 chr3L:18950470-18950590 0.00038 20_[+1]_92 chr2L:10987160-10987280 0.00038 43_[+1]_69 chr2L:1118662-1118782 0.00039 82_[+1]_30 chr3L:7806917-7807037 0.00039 86_[+1]_26 chr3L:2418520-2418640 0.00048 8_[+1]_104 chrX:5056137-5056257 0.00048 77_[+1]_35 chr3R:25056905-25057025 0.0005 106_[+1]_6 chr2R:21664921-21665041 0.00055 75_[+1]_37 chrX:3374408-3374528 0.00055 26_[+1]_86 chr3L:8412890-8413010 0.00062 61_[+1]_51 chr2R:16730620-16730740 0.00062 40_[+1]_72 chr2R:22806351-22806471 0.00062 22_[+1]_90 chrX:3373811-3373931 0.00062 34_[+1]_78 chr2L:7809023-7809143 0.00062 38_[+1]_74 chr3R:26979134-26979254 0.00062 61_[+1]_51 chrX:14193152-14193272 0.00062 38_[+1]_74 chrX:11453853-11453973 0.00068 57_[+1]_55 chr3L:11276114-11276234 0.00068 69_[+1]_43 chr2R:22925844-22925964 0.00068 48_[+1]_64 chr3R:14736800-14736920 0.00078 50_[+1]_62 chr2R:16582795-16582915 0.00078 30_[+1]_82 chr2R:5413443-5413563 0.00078 55_[+1]_57 chrX:19475023-19475143 0.00078 57_[+1]_55 chr3R:27926082-27926202 0.00078 66_[+1]_46 chr2L:5006491-5006611 0.00083 27_[+1]_85 chrX:21311769-21311889 0.00083 6_[+1]_106 chrX:470727-470847 0.00083 20_[+1]_92 chr2R:19300129-19300249 0.00088 49_[+1]_63 chrX:5061899-5062019 0.00088 20_[+1]_92 chrX:2076286-2076406 0.00088 74_[+1]_38 chr2L:8433759-8433879 0.00095 29_[+1]_83 chr2R:15930913-15931033 0.00095 13_[+1]_99 chr3L:18627520-18627640 0.00095 39_[+1]_73 chrX:4679012-4679132 0.001 14_[+1]_98 chrX:10890902-10891022 0.001 108_[+1]_4 chr3R:27928207-27928327 0.0011 26_[+1]_86 chr3L:12203908-12204028 0.0011 68_[+1]_44 chr2R:20670485-20670605 0.0011 49_[+1]_63 chr2R:20998815-20998935 0.0011 64_[+1]_48 chr2R:7257934-7258054 0.0012 42_[+1]_70 chr2L:11001297-11001417 0.0012 80_[+1]_32 chr3R:30782686-30782806 0.0012 9_[+1]_103 chr3R:7913854-7913974 0.0012 76_[+1]_36 chr3L:7834146-7834266 0.0013 40_[+1]_72 chr3R:13729041-13729161 0.0013 96_[+1]_16 chr3R:14739960-14740080 0.0013 56_[+1]_56 chr3L:12179052-12179172 0.0013 78_[+1]_34 chrX:11679327-11679447 0.0013 23_[+1]_89 chr3R:16625781-16625901 0.0013 16_[+1]_96 chrX:5893770-5893890 0.0013 111_[+1]_1 chr2L:6611525-6611645 0.0013 64_[+1]_48 chr3L:9504679-9504799 0.0013 91_[+1]_21 chr2L:20761139-20761259 0.0013 42_[+1]_70 chr2L:9734884-9735004 0.0013 10_[+1]_102 chr3R:24860543-24860663 0.0014 57_[+1]_55 chr3L:8684838-8684958 0.0015 25_[+1]_87 chrX:19608632-19608752 0.0015 112_[+1] chrX:12905805-12905925 0.0015 41_[+1]_71 chrX:3448425-3448545 0.0017 13_[+1]_99 chr3R:31711759-31711879 0.0017 19_[+1]_93 chr2L:15271454-15271574 0.0017 74_[+1]_38 chrX:1047067-1047187 0.0017 39_[+1]_73 chr2R:19450687-19450807 0.0018 10_[+1]_102 chr3R:13971532-13971652 0.0018 58_[+1]_54 chr2R:21183922-21184042 0.002 2_[+1]_110 chrX:5063270-5063390 0.0022 86_[+1]_26 chrX:17627308-17627428 0.0023 67_[+1]_45 chr3L:18044427-18044547 0.0024 50_[+1]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TACCGTTA width=8 seqs=194 chr2L:17496966-17497086 ( 38) TACCGTTA 1 chr2L:7038963-7039083 ( 52) TACCGTTA 1 chr2L:481496-481616 ( 47) TACCGTTA 1 chr3R:20714445-20714565 ( 32) TACCGTTA 1 chrX:11805150-11805270 ( 75) TACCGTTA 1 chrX:7959514-7959634 ( 68) TACCGTTA 1 chr3R:21141443-21141563 ( 41) TACCGTTA 1 chr3R:29868464-29868584 ( 66) TACCGTTA 1 chrX:10325373-10325493 ( 64) TACCGTTA 1 chr3R:21853026-21853146 ( 80) TACCGTTA 1 chr3R:29766248-29766368 ( 69) TACCGTTA 1 chr2L:21220572-21220692 ( 69) TACCGTTA 1 chrX:22480703-22480823 ( 63) TACCGTTA 1 chr2L:21238198-21238318 ( 64) TACCGTTA 1 chr2R:22373015-22373135 ( 48) TACCGTTA 1 chr3R:9929297-9929417 ( 66) TACCGTTA 1 chr3L:11938853-11938973 ( 54) TACCGTTA 1 chr3R:22727605-22727725 ( 53) TACCGTTA 1 chrX:15306100-15306220 ( 30) TACCGTTA 1 chr2R:21161120-21161240 ( 37) TACCGTTA 1 chrX:15063120-15063240 ( 64) TACCGTTA 1 chr2R:10416902-10417022 ( 39) TACCGTTA 1 chr2R:7786338-7786458 ( 43) TACCGTTA 1 chr2R:24790162-24790282 ( 26) TACCGTTA 1 chrX:8046671-8046791 ( 27) TACCGTTA 1 chr2L:4982212-4982332 ( 50) TACCGTTA 1 chrX:14225798-14225918 ( 57) TACCGTTA 1 chr2R:7782073-7782193 ( 57) TACCGTTA 1 chrX:19260559-19260679 ( 41) TACCGTTA 1 chrX:13735447-13735567 ( 81) TACCGTTA 1 chrX:15045706-15045826 ( 37) TACCGTTA 1 chrX:18835440-18835560 ( 87) TACCGTTA 1 chrX:3867915-3868035 ( 80) TACCGTTA 1 chrX:14221297-14221417 ( 49) TACCGTTA 1 chr3L:2378248-2378368 ( 39) TACCGTTA 1 chrX:10772443-10772563 ( 60) AACCGTTA 1 chrX:1620042-1620162 ( 38) AACCGTTA 1 chr2L:1157285-1157405 ( 43) AACCGTTA 1 chrX:278933-279053 ( 106) AACCGTTA 1 chr2R:10104095-10104215 ( 56) AACCGTTA 1 chrX:2738847-2738967 ( 80) AACCGTTA 1 chrX:18374785-18374905 ( 71) AACCGTTA 1 chr2R:6647975-6648095 ( 65) AACCGTTA 1 chrX:1904092-1904212 ( 29) AACCGTTA 1 chrX:2685684-2685804 ( 48) AACCGTTA 1 chrX:8490410-8490530 ( 83) AACCGTTA 1 chrX:3382252-3382372 ( 59) AACCGTTA 1 chr2R:12981492-12981612 ( 56) AACCGTTA 1 chrX:13373999-13374119 ( 86) AACCGTTA 1 chr3L:7935548-7935668 ( 64) AACCGTTA 1 chrX:1454941-1455061 ( 73) AACCGTTA 1 chrX:3775272-3775392 ( 40) AACCGTTA 1 chr2R:7767675-7767795 ( 73) TACCGTTG 1 chr3R:13305103-13305223 ( 31) TACCGTTG 1 chrX:14832044-14832164 ( 46) TACCGTTG 1 chr2L:4185370-4185490 ( 60) CACCGTTA 1 chrX:12718686-12718806 ( 50) CACCGTTA 1 chrX:1276220-1276340 ( 10) CACCGTTA 1 chr3L:6976066-6976186 ( 55) CACCGTTA 1 chrX:12463993-12464113 ( 59) CACCGTTA 1 chrX:2298110-2298230 ( 23) CACCGTTA 1 chr3L:15108610-15108730 ( 68) CACCGTTA 1 chrX:8489395-8489515 ( 78) CACCGTTA 1 chr2L:16276310-16276430 ( 24) CACCGTTA 1 chr3L:3338593-3338713 ( 68) CACCGTTA 1 chr3R:8934970-8935090 ( 40) CACCGTTA 1 chr2R:14871551-14871671 ( 75) CACCGTTA 1 chrX:17694672-17694792 ( 58) CACCGTTA 1 chr3L:20827982-20828102 ( 62) TAACGGTA 1 chrX:9599196-9599316 ( 19) TAACGGTA 1 chrX:4937386-4937506 ( 47) TAACGGTA 1 chrX:12012619-12012739 ( 89) TAACGGTA 1 chrX:11682247-11682367 ( 68) TAACGGTA 1 chrX:927631-927751 ( 54) TAACGGTA 1 chr2L:16530821-16530941 ( 74) TAACGGTA 1 chr2R:22941029-22941149 ( 80) TAACGGTA 1 chrX:1321824-1321944 ( 44) TAACGGTA 1 chr3R:29158287-29158407 ( 56) TAACGGTA 1 chr2L:3348626-3348746 ( 72) TAACGGTA 1 chr2L:2888183-2888303 ( 52) TAACGGTA 1 chrX:22515208-22515328 ( 76) TAACGGTA 1 chr2L:13779697-13779817 ( 48) TAACGGTA 1 chr2R:12034809-12034929 ( 43) TAACGGTA 1 chr3R:29139109-29139229 ( 30) TAACGGTA 1 chr3L:1537501-1537621 ( 75) TAACGGTA 1 chr2L:13204281-13204401 ( 91) TAACGGTA 1 chrX:9601436-9601556 ( 62) TAACGGTA 1 chrX:3688437-3688557 ( 54) TAACGGTA 1 chr3R:9704343-9704463 ( 54) TAACGGTA 1 chr3R:15289983-15290103 ( 17) TAACGGTA 1 chrX:7137710-7137830 ( 86) TAACGGTA 1 chr3R:16287966-16288086 ( 32) TAACGGTA 1 chr3R:20958927-20959047 ( 63) TGCCGTTA 1 chr2L:7000709-7000829 ( 60) TGCCGTTA 1 chr2R:1081383-1081503 ( 44) TGCCGTTA 1 chrX:15075608-15075728 ( 41) TGCCGTTA 1 chr3R:11947662-11947782 ( 40) TGCCGTTA 1 chrX:3369593-3369713 ( 36) TGCCGTTA 1 chr2R:5702457-5702577 ( 46) TGCCGTTA 1 chrX:10889839-10889959 ( 43) TGCCGTTA 1 chr2L:19530299-19530419 ( 16) AACCGGTA 1 chrX:619700-619820 ( 57) TCCCGTTA 1 chr2R:6971040-6971160 ( 61) TCCCGTTA 1 chr3R:27111773-27111893 ( 66) TCCCGTTA 1 chr2R:6631824-6631944 ( 57) TCCCGTTA 1 chrX:1041503-1041623 ( 3) TCCCGTTA 1 chr2R:10569412-10569532 ( 74) TCCCGTTA 1 chr2L:16041866-16041986 ( 36) TCCCGTTA 1 chr3R:15901099-15901219 ( 29) TTCCGTTA 1 chr2L:19571070-19571190 ( 78) TTCCGTTA 1 chrX:9465920-9466040 ( 39) TACCGTTT 1 chr2R:11660721-11660841 ( 20) TTCCGTTA 1 chrX:19148962-19149082 ( 41) TTCCGTTA 1 chrX:17102239-17102359 ( 84) TACCGTTT 1 chr2R:14295707-14295827 ( 73) TTCCGTTA 1 chrX:5964320-5964440 ( 64) TTCCGTTA 1 chr3R:20960115-20960235 ( 105) TACCGTTT 1 chrX:1341669-1341789 ( 35) TTCCGTTA 1 chr3L:18071374-18071494 ( 55) TACCGTTT 1 chr3R:14663411-14663531 ( 94) TACCGTTT 1 chr3L:16680614-16680734 ( 41) GACCGTTA 1 chrX:154295-154415 ( 75) GACCGTTA 1 chr2L:7969487-7969607 ( 45) GACCGTTA 1 chrX:21375234-21375354 ( 68) TACAGTTA 1 chrX:5064081-5064201 ( 66) TACAGTTA 1 chr3L:7650393-7650513 ( 93) TACAGTTA 1 chr3L:18950470-18950590 ( 21) TACCGCTA 1 chr2L:10987160-10987280 ( 44) TACCGCTA 1 chr2L:1118662-1118782 ( 83) AACCGTTG 1 chr3L:7806917-7807037 ( 87) AACCGTTG 1 chr3L:2418520-2418640 ( 9) AAACGGTA 1 chrX:5056137-5056257 ( 78) TACCGGTT 1 chr3R:25056905-25057025 ( 107) AGCCGTTA 1 chr2R:21664921-21665041 ( 76) CACCGTTG 1 chrX:3374408-3374528 ( 27) TACCGGAA 1 chr3L:8412890-8413010 ( 62) TAACGGTG 1 chr2R:16730620-16730740 ( 41) TAACGGTG 1 chr2R:22806351-22806471 ( 23) TAACGGTG 1 chrX:3373811-3373931 ( 35) TAACGGTG 1 chr2L:7809023-7809143 ( 39) TAACGGTG 1 chr3R:26979134-26979254 ( 62) TAACGGTG 1 chrX:14193152-14193272 ( 39) TAACGGTG 1 chrX:11453853-11453973 ( 58) TGCCGTTG 1 chr3L:11276114-11276234 ( 70) TGCCGTTG 1 chr2R:22925844-22925964 ( 49) TACCGTTC 1 chr3R:14736800-14736920 ( 51) TAACGTAA 1 chr2R:16582795-16582915 ( 31) TCCCGTTG 1 chr2R:5413443-5413563 ( 56) ATCCGTTA 1 chrX:19475023-19475143 ( 58) ATCCGTTA 1 chr3R:27926082-27926202 ( 67) CGCCGTTA 1 chr2L:5006491-5006611 ( 28) TAAAGTTA 1 chrX:21311769-21311889 ( 7) CCCCGTTA 1 chrX:470727-470847 ( 21) TAAAGTTA 1 chr2R:19300129-19300249 ( 50) TAACGCTA 1 chrX:5061899-5062019 ( 21) AACCGTAA 1 chrX:2076286-2076406 ( 75) AACCGTAA 1 chr2L:8433759-8433879 ( 30) AACAGTTA 1 chr2R:15930913-15931033 ( 14) AAACGTTG 1 chr3L:18627520-18627640 ( 40) AACAGTTA 1 chrX:4679012-4679132 ( 15) CTCCGTTA 1 chrX:10890902-10891022 ( 109) AACCGCTA 1 chr3R:27928207-27928327 ( 27) TAACGGTT 1 chr3L:12203908-12204028 ( 69) TAACGGTT 1 chr2R:20670485-20670605 ( 50) TAACGGTT 1 chr2R:20998815-20998935 ( 65) TAACGGTT 1 chr2R:7257934-7258054 ( 43) GAACGGTA 1 chr2L:11001297-11001417 ( 81) TACAGTTG 1 chr3R:30782686-30782806 ( 10) GAACGGTA 1 chr3R:7913854-7913974 ( 77) TGCCGTTT 1 chr3L:7834146-7834266 ( 41) TACCGCTG 1 chr3R:13729041-13729161 ( 97) TAACGGAA 1 chr3R:14739960-14740080 ( 57) TAACGGAA 1 chr3L:12179052-12179172 ( 79) TAACGGAA 1 chrX:11679327-11679447 ( 24) TAACGGAA 1 chr3R:16625781-16625901 ( 17) TAACGGAA 1 chrX:5893770-5893890 ( 112) ACACGTTA 1 chr2L:6611525-6611645 ( 65) TAACGGAA 1 chr3L:9504679-9504799 ( 92) TCCCGTTT 1 chr2L:20761139-20761259 ( 43) TAACGGAA 1 chr2L:9734884-9735004 ( 11) AACCGGTT 1 chr3R:24860543-24860663 ( 58) GCCCGTTA 1 chr3L:8684838-8684958 ( 26) TGACGTTG 1 chrX:19608632-19608752 ( 113) TCCCGTAA 1 chrX:12905805-12905925 ( 42) TGCAGTTA 1 chrX:3448425-3448545 ( 14) AAACGGTG 1 chr3R:31711759-31711879 ( 20) TGCCGCTA 1 chr2L:15271454-15271574 ( 75) AAACGGTG 1 chrX:1047067-1047187 ( 40) TCCAGTTA 1 chr2R:19450687-19450807 ( 11) AACCGTTC 1 chr3R:13971532-13971652 ( 59) GTCCGTTA 1 chr2R:21183922-21184042 ( 3) TTCAGTTA 1 chrX:5063270-5063390 ( 87) GACAGTTA 1 chrX:17627308-17627428 ( 68) CACCGTTC 1 chr3L:18044427-18044547 ( 51) CCCCGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.63714 E= 1.4e-097 -61 -121 -243 130 150 -155 -143 -216 1 167 -1424 -1424 -216 205 -1424 -1424 -1424 -1424 217 -1424 -1424 -287 25 135 -216 -1424 -1424 176 154 -387 -90 -205 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 194 E= 1.4e-097 0.180412 0.097938 0.041237 0.680412 0.778351 0.077320 0.082474 0.061856 0.278351 0.721649 0.000000 0.000000 0.061856 0.938144 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.030928 0.262887 0.706186 0.061856 0.000000 0.000000 0.938144 0.798969 0.015464 0.118557 0.067010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TACCGTTA MEME-1 regular expression -------------------------------------------------------------------------------- TA[CA]CG[TG]TA -------------------------------------------------------------------------------- Time 7.36 secs. ******************************************************************************** ******************************************************************************** MOTIF CACACACA MEME-2 width = 8 sites = 43 llr = 369 E-value = 1.8e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACACACA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :8:9:91a pos.-specific C 8:a1a:9: probability G :2:::1:: matrix T 2::::::: bits 2.2 * 2.0 * * * 1.7 * * ** 1.5 * * ** Relative 1.3 ***** ** Entropy 1.1 ******** (12.4 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CACACACA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:20251720-20251840 91 1.51e-05 gcaccgcaca cacacaca cacgcgcaca chrX:4937386-4937506 73 1.51e-05 cacatacaca cacacaca cacaGATGAG chrX:278933-279053 88 1.51e-05 ACCTAATACA CACACACA AGCCAGCAAG chr3R:14739960-14740080 26 1.51e-05 ACACGCATCG CACACACA CTTATCCCAC chrX:5056137-5056257 1 1.51e-05 . cacacaca caacaGTGGG chrX:927631-927751 6 1.51e-05 TAGTT CACACACA TACACTCTCG chr2L:16530821-16530941 101 1.51e-05 ACGGTACTCA CACACACA CACAAGCAGA chrX:16694673-16694793 72 1.51e-05 AGGGTTTCTG CACACACA TATGCATAAT chrX:3373811-3373931 47 1.51e-05 ACGGTGCTCT CACACACA ATGACAAATC chrX:19608632-19608752 44 1.51e-05 CGCATGcaca cacacaca gatacacaca chr2L:7809023-7809143 88 1.51e-05 TTCTCCAACT CACACACA CTACTCCACT chr3L:18950470-18950590 52 1.51e-05 CCCAAACGCA CACACACA GCGGCTTATA chr3R:22727605-22727725 113 1.51e-05 cactcattca cacacaca chr3L:1537501-1537621 110 1.51e-05 gcagcacacg cacacaca TGG chr3R:30782686-30782806 23 1.51e-05 CGGTAAACAA CACACACA TGCACAGGCG chr2L:6611525-6611645 105 1.51e-05 ACTacacaca cacacaca cacacGTG chrX:1041503-1041623 23 1.51e-05 ACCACACTCC CACACACA GCAGCGGTCA chrX:4679012-4679132 37 2.73e-05 GCATCCCACT CGCACACA ATGTACAGCT chr2R:6971040-6971160 14 2.73e-05 GCGGCAAAAG CGCACACA AAGGATAGAA chr3R:20958927-20959047 109 4.59e-05 TGCATTTCCA TACACACA CTCG chr3R:16095037-16095157 6 4.59e-05 ATAGA TACACACA TAGGTGAATA chrX:7137710-7137830 61 4.59e-05 TAAACAGGTA TACACACA AATTTCGCCG chrX:18835440-18835560 60 4.59e-05 TGCAGAAACA TACACACA AATTGAAACT chr2R:10777052-10777172 70 5.83e-05 TAAATTAAAA CACCCACA CGGGTTAACC chrX:12905805-12905925 1 7.04e-05 . CACACGCA CGCACGCCGC chrX:9601436-9601556 91 7.04e-05 GTGGGCTATA CACACGCA GCTGCACAGT chrX:13735447-13735567 47 7.04e-05 TTTTGCAAAT CACACGCA ATTTTCTCTC chr2R:24790162-24790282 49 8.89e-05 TCAGTGGGGC CACACAAA CGTGTGCAAA chrX:5064081-5064201 88 1.01e-04 TAGAATGACA CACACCCA TGGAATTGAA chr2L:9734884-9735004 72 1.01e-04 CCCACCGCAC CACACCCA CTCGACCCAC chrX:12718686-12718806 40 1.16e-04 AAGGCATGCA TGCACACA TGCACCGTTA chr2R:7782073-7782193 91 1.16e-04 ACCGTTGCAC TGCACACA CTGAGGGACA chrX:1321824-1321944 35 1.35e-04 TTTTCACACT CACAAACA GTAACGGTAA chrX:16569518-16569638 111 1.35e-04 GCAGCGGTTG CACAAACA GA chrX:11325772-11325892 60 1.45e-04 GTGCAATCAG CGCCCACA TAACGGACCT chrX:11682247-11682367 56 1.45e-04 cagcaacTGT CGCCCACA AAGGTAACGG chr2R:6631824-6631944 87 1.45e-04 GAAGCCAGTA CGCCCACA CGCTTATCCC chrX:17627308-17627428 112 1.70e-04 ACTAAAACAG CACACTCA C chr3L:7979878-7979998 104 1.85e-04 CTCAGAATCG CACTCACA TGCGCACAC chr3L:12203908-12204028 104 2.33e-04 GCGAGCTTTT CGCACAAA GCTTTCCGA chr3R:11947662-11947782 71 2.33e-04 GGCAAAAGCA AACACACA AGCACACATT chr2L:5006491-5006611 16 2.81e-04 GTAGTTATAA TACACAAA TGTGTAAAGT chr2L:11001297-11001417 72 2.81e-04 AATTCATAAT TACACAAA TTACAGTTGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:20251720-20251840 1.5e-05 90_[+2]_22 chrX:4937386-4937506 1.5e-05 72_[+2]_40 chrX:278933-279053 1.5e-05 87_[+2]_25 chr3R:14739960-14740080 1.5e-05 25_[+2]_87 chrX:5056137-5056257 1.5e-05 [+2]_112 chrX:927631-927751 1.5e-05 5_[+2]_107 chr2L:16530821-16530941 1.5e-05 100_[+2]_12 chrX:16694673-16694793 1.5e-05 71_[+2]_41 chrX:3373811-3373931 1.5e-05 46_[+2]_66 chrX:19608632-19608752 1.5e-05 43_[+2]_69 chr2L:7809023-7809143 1.5e-05 87_[+2]_25 chr3L:18950470-18950590 1.5e-05 51_[+2]_61 chr3R:22727605-22727725 1.5e-05 112_[+2] chr3L:1537501-1537621 1.5e-05 109_[+2]_3 chr3R:30782686-30782806 1.5e-05 22_[+2]_90 chr2L:6611525-6611645 1.5e-05 104_[+2]_8 chrX:1041503-1041623 1.5e-05 22_[+2]_90 chrX:4679012-4679132 2.7e-05 36_[+2]_76 chr2R:6971040-6971160 2.7e-05 13_[+2]_99 chr3R:20958927-20959047 4.6e-05 108_[+2]_4 chr3R:16095037-16095157 4.6e-05 5_[+2]_107 chrX:7137710-7137830 4.6e-05 60_[+2]_52 chrX:18835440-18835560 4.6e-05 59_[+2]_53 chr2R:10777052-10777172 5.8e-05 69_[+2]_43 chrX:12905805-12905925 7e-05 [+2]_112 chrX:9601436-9601556 7e-05 90_[+2]_22 chrX:13735447-13735567 7e-05 46_[+2]_66 chr2R:24790162-24790282 8.9e-05 48_[+2]_64 chrX:5064081-5064201 0.0001 87_[+2]_25 chr2L:9734884-9735004 0.0001 71_[+2]_41 chrX:12718686-12718806 0.00012 39_[+2]_73 chr2R:7782073-7782193 0.00012 90_[+2]_22 chrX:1321824-1321944 0.00013 34_[+2]_78 chrX:16569518-16569638 0.00013 110_[+2]_2 chrX:11325772-11325892 0.00014 59_[+2]_53 chrX:11682247-11682367 0.00014 55_[+2]_57 chr2R:6631824-6631944 0.00014 86_[+2]_26 chrX:17627308-17627428 0.00017 111_[+2]_1 chr3L:7979878-7979998 0.00018 103_[+2]_9 chr3L:12203908-12204028 0.00023 103_[+2]_9 chr3R:11947662-11947782 0.00023 70_[+2]_42 chr2L:5006491-5006611 0.00028 15_[+2]_97 chr2L:11001297-11001417 0.00028 71_[+2]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACACACA width=8 seqs=43 chrX:20251720-20251840 ( 91) CACACACA 1 chrX:4937386-4937506 ( 73) CACACACA 1 chrX:278933-279053 ( 88) CACACACA 1 chr3R:14739960-14740080 ( 26) CACACACA 1 chrX:5056137-5056257 ( 1) CACACACA 1 chrX:927631-927751 ( 6) CACACACA 1 chr2L:16530821-16530941 ( 101) CACACACA 1 chrX:16694673-16694793 ( 72) CACACACA 1 chrX:3373811-3373931 ( 47) CACACACA 1 chrX:19608632-19608752 ( 44) CACACACA 1 chr2L:7809023-7809143 ( 88) CACACACA 1 chr3L:18950470-18950590 ( 52) CACACACA 1 chr3R:22727605-22727725 ( 113) CACACACA 1 chr3L:1537501-1537621 ( 110) CACACACA 1 chr3R:30782686-30782806 ( 23) CACACACA 1 chr2L:6611525-6611645 ( 105) CACACACA 1 chrX:1041503-1041623 ( 23) CACACACA 1 chrX:4679012-4679132 ( 37) CGCACACA 1 chr2R:6971040-6971160 ( 14) CGCACACA 1 chr3R:20958927-20959047 ( 109) TACACACA 1 chr3R:16095037-16095157 ( 6) TACACACA 1 chrX:7137710-7137830 ( 61) TACACACA 1 chrX:18835440-18835560 ( 60) TACACACA 1 chr2R:10777052-10777172 ( 70) CACCCACA 1 chrX:12905805-12905925 ( 1) CACACGCA 1 chrX:9601436-9601556 ( 91) CACACGCA 1 chrX:13735447-13735567 ( 47) CACACGCA 1 chr2R:24790162-24790282 ( 49) CACACAAA 1 chrX:5064081-5064201 ( 88) CACACCCA 1 chr2L:9734884-9735004 ( 72) CACACCCA 1 chrX:12718686-12718806 ( 40) TGCACACA 1 chr2R:7782073-7782193 ( 91) TGCACACA 1 chrX:1321824-1321944 ( 35) CACAAACA 1 chrX:16569518-16569638 ( 111) CACAAACA 1 chrX:11325772-11325892 ( 60) CGCCCACA 1 chrX:11682247-11682367 ( 56) CGCCCACA 1 chr2R:6631824-6631944 ( 87) CGCCCACA 1 chrX:17627308-17627428 ( 112) CACACTCA 1 chr3L:7979878-7979998 ( 104) CACTCACA 1 chr3L:12203908-12204028 ( 104) CGCACAAA 1 chr3R:11947662-11947782 ( 71) AACACACA 1 chr2L:5006491-5006611 ( 16) TACACAAA 1 chr2L:11001297-11001417 ( 72) TACACAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.3653 E= 1.8e-006 -356 181 -1207 -57 156 -1207 -25 -1207 -1207 215 -1207 -1207 168 -128 -1207 -357 -257 208 -1207 -1207 164 -228 -167 -357 -157 200 -1207 -1207 186 -1207 -1207 -1207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 43 E= 1.8e-006 0.023256 0.790698 0.000000 0.186047 0.813953 0.000000 0.186047 0.000000 0.000000 1.000000 0.000000 0.000000 0.883721 0.093023 0.000000 0.023256 0.046512 0.953488 0.000000 0.000000 0.860465 0.046512 0.069767 0.023256 0.093023 0.906977 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACACACA MEME-2 regular expression -------------------------------------------------------------------------------- CACACACA -------------------------------------------------------------------------------- Time 13.31 secs. ******************************************************************************** ******************************************************************************** MOTIF CAACAACA MEME-3 width = 8 sites = 18 llr = 175 E-value = 1.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 2aa2a9:a pos.-specific C 8::8::a: probability G :::::1:: matrix T :::::::: bits 2.2 * 2.0 ** * ** 1.7 ** * ** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (14.0 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAACAACA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:7050872-7050992 34 1.85e-05 GGAAACATTG CAACAACA ACGACAGCAG chr2R:19300129-19300249 13 1.85e-05 CGCATCAACG CAACAACA ACCCTCGCCG chr2R:5413443-5413563 37 1.85e-05 ATGATTTAGG CAACAACA ATACAATAAA chrX:19259931-19260051 58 1.85e-05 CGTGAAATGA CAACAACA CAGCGTCATA chrX:10325373-10325493 22 1.85e-05 CAATATTTTG CAACAACA CAACGGGCTG chr2R:17843298-17843418 38 1.85e-05 TCACCTGGGC CAACAACA AAATGTGCAA chr3R:30782686-30782806 70 1.85e-05 GGGCGGGGGA CAACAACA CGTGTTGCCA chr3R:31711759-31711879 34 1.85e-05 GCTAAGCCAG CAACAACA ATTAAGCAAT chr2R:12981492-12981612 12 1.85e-05 CAGTGGCAGC CAACAACA ATAAAAGCAG chrX:19260559-19260679 86 1.85e-05 CCGCCCCCCT CAACAACA TATTATTGTT chrX:5734971-5735091 107 1.85e-05 CTGCAAATAG CAACAACA AGCCGC chr2L:19530299-19530419 63 6.36e-05 CGACCGTTAG AAACAACA CCCGTTACTT chrX:4937386-4937506 105 6.36e-05 AATAGCCAGG CAAAAACA AGAAAAAG chr3L:16680614-16680734 10 6.36e-05 AAATTAATT CAAAAACA GTAAGCCCGG chrX:9464101-9464221 94 6.36e-05 ATTAATTATT CAAAAACA ATTAACTTTG chr2R:10777052-10777172 113 6.36e-05 GGGGGACATC AAACAACA chr3R:5658973-5659093 8 6.36e-05 ACATACA AAACAACA GCTGTTCTTT chrX:13373999-13374119 23 7.85e-05 AAATcaacgg caacagca acggtgacgg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:7050872-7050992 1.8e-05 33_[+3]_79 chr2R:19300129-19300249 1.8e-05 12_[+3]_100 chr2R:5413443-5413563 1.8e-05 36_[+3]_76 chrX:19259931-19260051 1.8e-05 57_[+3]_55 chrX:10325373-10325493 1.8e-05 21_[+3]_91 chr2R:17843298-17843418 1.8e-05 37_[+3]_75 chr3R:30782686-30782806 1.8e-05 69_[+3]_43 chr3R:31711759-31711879 1.8e-05 33_[+3]_79 chr2R:12981492-12981612 1.8e-05 11_[+3]_101 chrX:19260559-19260679 1.8e-05 85_[+3]_27 chrX:5734971-5735091 1.8e-05 106_[+3]_6 chr2L:19530299-19530419 6.4e-05 62_[+3]_50 chrX:4937386-4937506 6.4e-05 104_[+3]_8 chr3L:16680614-16680734 6.4e-05 9_[+3]_103 chrX:9464101-9464221 6.4e-05 93_[+3]_19 chr2R:10777052-10777172 6.4e-05 112_[+3] chr3R:5658973-5659093 6.4e-05 7_[+3]_105 chrX:13373999-13374119 7.9e-05 22_[+3]_90 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAACAACA width=8 seqs=18 chr2L:7050872-7050992 ( 34) CAACAACA 1 chr2R:19300129-19300249 ( 13) CAACAACA 1 chr2R:5413443-5413563 ( 37) CAACAACA 1 chrX:19259931-19260051 ( 58) CAACAACA 1 chrX:10325373-10325493 ( 22) CAACAACA 1 chr2R:17843298-17843418 ( 38) CAACAACA 1 chr3R:30782686-30782806 ( 70) CAACAACA 1 chr3R:31711759-31711879 ( 34) CAACAACA 1 chr2R:12981492-12981612 ( 12) CAACAACA 1 chrX:19260559-19260679 ( 86) CAACAACA 1 chrX:5734971-5735091 ( 107) CAACAACA 1 chr2L:19530299-19530419 ( 63) AAACAACA 1 chrX:4937386-4937506 ( 105) CAAAAACA 1 chr3L:16680614-16680734 ( 10) CAAAAACA 1 chrX:9464101-9464221 ( 94) CAAAAACA 1 chr2R:10777052-10777172 ( 113) AAACAACA 1 chr3R:5658973-5659093 ( 8) AAACAACA 1 chrX:13373999-13374119 ( 23) CAACAGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.91657 E= 1.2e+002 -73 188 -1081 -1081 186 -1081 -1081 -1081 186 -1081 -1081 -1081 -73 188 -1081 -1081 186 -1081 -1081 -1081 178 -1081 -199 -1081 -1081 214 -1081 -1081 186 -1081 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 18 E= 1.2e+002 0.166667 0.833333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.166667 0.833333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.944444 0.000000 0.055556 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAACAACA MEME-3 regular expression -------------------------------------------------------------------------------- CAACAACA -------------------------------------------------------------------------------- Time 19.18 secs. ******************************************************************************** ******************************************************************************** MOTIF TAACGGYA MEME-4 width = 8 sites = 55 llr = 428 E-value = 2.3e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :a9:::16 pos.-specific C :::a::21 probability G ::1:7a21 matrix T a:::3:52 bits 2.2 * * 2.0 ** * * 1.7 ** * * 1.5 ** * * Relative 1.3 ****** Entropy 1.1 ****** (11.2 bits) 0.9 ****** 0.7 ****** 0.4 ****** * 0.2 ******** 0.0 -------- Multilevel TAACGGTA consensus T CT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:278933-279053 35 1.80e-05 GGCGCCGATG TAACGGTA ACACAAGCTA chrX:1321824-1321944 71 1.80e-05 TGGGCCTAGA TAACGGTA ATAGTGGCCG chrX:10889839-10889959 68 1.80e-05 TGACTACTGC TAACGGTA CATTCGTAGC chr2L:8433759-8433879 48 3.26e-05 TTCAATTTGT TAACGGCA CTTTTCACTG chr3R:24925376-24925496 67 3.26e-05 CCAGTTCGGA TAACGGCA CTATTCGCGT chr2R:17843298-17843418 17 3.26e-05 CCACGGAATC TAACGGCA AAATCACCTG chr3L:11938853-11938973 67 3.26e-05 CGTTACTTTA TAACGGCA CTGCTAACAG chr3L:9396140-9396260 70 3.26e-05 TTTGTTTGTT TAACGGCA CTTTTTGTTG chr3R:15993924-15994044 18 3.26e-05 GGCGCTCGTG TAACGGCA TGTAGAGCAA chrX:3775272-3775392 69 3.26e-05 GTCGGCGAAG TAACGGCA CAAGTATTGC chrX:15333744-15333864 60 4.70e-05 AATCGATAAA TAACGGGA GTCGAGGAGC chrX:20251720-20251840 43 4.70e-05 CATAGGTGAG TAACGGGA CCGTACGCAC chr2L:7050872-7050992 73 4.70e-05 GAGGGTCTTA TAACGGGA GAACATCAGA chrX:470727-470847 54 4.70e-05 TAGAACAAAG TAACGGGA TTAAAAGCTC chrX:15075608-15075728 61 4.70e-05 CGCGCCAAAG TAACGGGA CTTGAGCGAG chr3L:9504679-9504799 37 4.70e-05 GTAATGCAAA TAACGGGA CAGGTGCAAC chr3R:14736800-14736920 14 6.51e-05 TGCTTTTCAG TAACGGTT GTCTGTATGC chr3R:21141443-21141563 93 6.51e-05 tctctcGGAA TAACGGTT AAACGGAAGC chr2L:13204281-13204401 45 6.51e-05 CCACAATGTC TAACGGTT CTTAGGGCAG chrX:11426132-11426252 35 8.75e-05 GTTGTAATTG TAACTGTA ATGCAAAACC chrX:5056137-5056257 104 8.75e-05 TAGGCCGCTT TAACTGTA TTAACACCG chrX:19259931-19260051 113 8.75e-05 TCGTTACAGC TAACTGTA chrX:17102239-17102359 30 8.75e-05 AAGAGAGACC TAACTGTA CTTCATCGCT chr3L:18819011-18819131 102 8.75e-05 ATCAAGAAAG TAACTGTA AATAAGCCAC chr3R:7913854-7913974 106 8.75e-05 TTACCAGCAA TAACTGTA AAACCAG chr2R:10104095-10104215 77 1.17e-04 GAGAACGAGA TAACGGGT TAAAGTGGCC chr2L:13094076-13094196 28 1.49e-04 agacaatagc taactgca aaCAGCATTG chrX:1276220-1276340 44 1.49e-04 GGTTATCAGC TAACGGTG CATGAAAAGG chrX:16694673-16694793 41 1.49e-04 AGAGAGCTAC TAACTGCA ATATTGACTT chr3R:14060033-14060153 60 1.49e-04 TGCCGCCAGA TAACTGCA CTTTCAATAA chr3R:29158287-29158407 72 1.49e-04 TAAATGTGGA TAACGGTG GATAAATCAC chr2L:21220572-21220692 88 1.85e-04 ATCATTTGTG TAACGGAA AATGTAAAAT chr2L:10987160-10987280 19 1.85e-04 GTTTGCGACA TAACGGAA TTATAAGGAA chrX:1275007-1275127 20 2.26e-04 AGTGCGATTC TAACGGCG CGAGAACGAA chr2R:7257934-7258054 74 2.26e-04 CAACGGCGAT TAACGGTC GGCTGGTTTT chr2R:5421033-5421153 43 2.26e-04 CACAGCAAAG TAACGGTC AAAGTTTGGC chrX:19608632-19608752 98 2.26e-04 CACAGCGGCT TAACGGTC AATCAAATCC chr2R:11105692-11105812 92 2.26e-04 GTCTACAGGA TAGCGGTA AATCAAAGCC chr2R:10535538-10535658 27 2.60e-04 TACTGAAAAC TAACTGTT CTCCGCGGCA chr3R:27111773-27111893 45 2.60e-04 AAGCGAACTG TAACTGTT TCTTTGGCCG chr3L:3461671-3461791 67 2.60e-04 AGTGCAGGAG TAACTGTT GCTGTCGCTT chr2R:21183922-21184042 46 2.60e-04 CGGTCCAAAC TAACGGGG CTTCTACAGC chrX:22480703-22480823 107 2.60e-04 ATGGGCAGAG TAACTGTT TTCGGT chrX:15306100-15306220 51 2.60e-04 GGCGGTAGTG TAACTGTT ACACTGTAAA chrX:2076286-2076406 18 2.60e-04 AACATGAAAA TAACTGTT TTGTTTTCCA chrX:19573818-19573938 47 2.60e-04 CTTTCGGGAA TAACGGGG CTCTTGTGGA chr2R:19450687-19450807 82 2.84e-04 AGAAGACGCA TAGCGGCA AAAAAAAAAA chrX:14221297-14221417 84 2.84e-04 TCGGAAGCGA TAGCGGCA CCGTTACCTT chr2R:15930913-15931033 78 3.26e-04 GCAGTCCAGA TAGCGGGA ATTCGTTATT chr3R:31711759-31711879 82 3.26e-04 GCACTTTGAA TAGCGGGA AAAAATCCAA chr2L:9734884-9735004 54 3.26e-04 TGCATGCAGT TAACGGGC CCCACCGCAC chr2L:16276310-16276430 44 3.62e-04 TGCGTGTGCC TAACTGTG AATGGTTTCA chrX:3373811-3373931 96 3.80e-04 CGATACGAAA TAACGGAT TCTAGGAACT chr2R:12981492-12981612 95 3.80e-04 AATGCAGATC TAACGGAT AAATTGCGAA chr3L:16680614-16680734 59 3.94e-04 TTAAGAGAAC TAGCGGTT GCAAGCAATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:278933-279053 1.8e-05 34_[+4]_78 chrX:1321824-1321944 1.8e-05 70_[+4]_42 chrX:10889839-10889959 1.8e-05 67_[+4]_45 chr2L:8433759-8433879 3.3e-05 47_[+4]_65 chr3R:24925376-24925496 3.3e-05 66_[+4]_46 chr2R:17843298-17843418 3.3e-05 16_[+4]_96 chr3L:11938853-11938973 3.3e-05 66_[+4]_46 chr3L:9396140-9396260 3.3e-05 69_[+4]_43 chr3R:15993924-15994044 3.3e-05 17_[+4]_95 chrX:3775272-3775392 3.3e-05 68_[+4]_44 chrX:15333744-15333864 4.7e-05 59_[+4]_53 chrX:20251720-20251840 4.7e-05 42_[+4]_70 chr2L:7050872-7050992 4.7e-05 72_[+4]_40 chrX:470727-470847 4.7e-05 53_[+4]_59 chrX:15075608-15075728 4.7e-05 60_[+4]_52 chr3L:9504679-9504799 4.7e-05 36_[+4]_76 chr3R:14736800-14736920 6.5e-05 13_[+4]_99 chr3R:21141443-21141563 6.5e-05 92_[+4]_20 chr2L:13204281-13204401 6.5e-05 44_[+4]_68 chrX:11426132-11426252 8.7e-05 34_[+4]_78 chrX:5056137-5056257 8.7e-05 103_[+4]_9 chrX:19259931-19260051 8.7e-05 112_[+4] chrX:17102239-17102359 8.7e-05 29_[+4]_83 chr3L:18819011-18819131 8.7e-05 101_[+4]_11 chr3R:7913854-7913974 8.7e-05 105_[+4]_7 chr2R:10104095-10104215 0.00012 76_[+4]_36 chr2L:13094076-13094196 0.00015 27_[+4]_85 chrX:1276220-1276340 0.00015 43_[+4]_69 chrX:16694673-16694793 0.00015 40_[+4]_72 chr3R:14060033-14060153 0.00015 59_[+4]_53 chr3R:29158287-29158407 0.00015 71_[+4]_41 chr2L:21220572-21220692 0.00019 87_[+4]_25 chr2L:10987160-10987280 0.00019 18_[+4]_94 chrX:1275007-1275127 0.00023 19_[+4]_93 chr2R:7257934-7258054 0.00023 73_[+4]_39 chr2R:5421033-5421153 0.00023 42_[+4]_70 chrX:19608632-19608752 0.00023 97_[+4]_15 chr2R:11105692-11105812 0.00023 91_[+4]_21 chr2R:10535538-10535658 0.00026 26_[+4]_86 chr3R:27111773-27111893 0.00026 44_[+4]_68 chr3L:3461671-3461791 0.00026 66_[+4]_46 chr2R:21183922-21184042 0.00026 45_[+4]_67 chrX:22480703-22480823 0.00026 106_[+4]_6 chrX:15306100-15306220 0.00026 50_[+4]_62 chrX:2076286-2076406 0.00026 17_[+4]_95 chrX:19573818-19573938 0.00026 46_[+4]_66 chr2R:19450687-19450807 0.00028 81_[+4]_31 chrX:14221297-14221417 0.00028 83_[+4]_29 chr2R:15930913-15931033 0.00033 77_[+4]_35 chr3R:31711759-31711879 0.00033 81_[+4]_31 chr2L:9734884-9735004 0.00033 53_[+4]_59 chr2L:16276310-16276430 0.00036 43_[+4]_69 chrX:3373811-3373931 0.00038 95_[+4]_17 chr2R:12981492-12981612 0.00038 94_[+4]_18 chr3L:16680614-16680734 0.00039 58_[+4]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAACGGYA width=8 seqs=55 chrX:278933-279053 ( 35) TAACGGTA 1 chrX:1321824-1321944 ( 71) TAACGGTA 1 chrX:10889839-10889959 ( 68) TAACGGTA 1 chr2L:8433759-8433879 ( 48) TAACGGCA 1 chr3R:24925376-24925496 ( 67) TAACGGCA 1 chr2R:17843298-17843418 ( 17) TAACGGCA 1 chr3L:11938853-11938973 ( 67) TAACGGCA 1 chr3L:9396140-9396260 ( 70) TAACGGCA 1 chr3R:15993924-15994044 ( 18) TAACGGCA 1 chrX:3775272-3775392 ( 69) TAACGGCA 1 chrX:15333744-15333864 ( 60) TAACGGGA 1 chrX:20251720-20251840 ( 43) TAACGGGA 1 chr2L:7050872-7050992 ( 73) TAACGGGA 1 chrX:470727-470847 ( 54) TAACGGGA 1 chrX:15075608-15075728 ( 61) TAACGGGA 1 chr3L:9504679-9504799 ( 37) TAACGGGA 1 chr3R:14736800-14736920 ( 14) TAACGGTT 1 chr3R:21141443-21141563 ( 93) TAACGGTT 1 chr2L:13204281-13204401 ( 45) TAACGGTT 1 chrX:11426132-11426252 ( 35) TAACTGTA 1 chrX:5056137-5056257 ( 104) TAACTGTA 1 chrX:19259931-19260051 ( 113) TAACTGTA 1 chrX:17102239-17102359 ( 30) TAACTGTA 1 chr3L:18819011-18819131 ( 102) TAACTGTA 1 chr3R:7913854-7913974 ( 106) TAACTGTA 1 chr2R:10104095-10104215 ( 77) TAACGGGT 1 chr2L:13094076-13094196 ( 28) TAACTGCA 1 chrX:1276220-1276340 ( 44) TAACGGTG 1 chrX:16694673-16694793 ( 41) TAACTGCA 1 chr3R:14060033-14060153 ( 60) TAACTGCA 1 chr3R:29158287-29158407 ( 72) TAACGGTG 1 chr2L:21220572-21220692 ( 88) TAACGGAA 1 chr2L:10987160-10987280 ( 19) TAACGGAA 1 chrX:1275007-1275127 ( 20) TAACGGCG 1 chr2R:7257934-7258054 ( 74) TAACGGTC 1 chr2R:5421033-5421153 ( 43) TAACGGTC 1 chrX:19608632-19608752 ( 98) TAACGGTC 1 chr2R:11105692-11105812 ( 92) TAGCGGTA 1 chr2R:10535538-10535658 ( 27) TAACTGTT 1 chr3R:27111773-27111893 ( 45) TAACTGTT 1 chr3L:3461671-3461791 ( 67) TAACTGTT 1 chr2R:21183922-21184042 ( 46) TAACGGGG 1 chrX:22480703-22480823 ( 107) TAACTGTT 1 chrX:15306100-15306220 ( 51) TAACTGTT 1 chrX:2076286-2076406 ( 18) TAACTGTT 1 chrX:19573818-19573938 ( 47) TAACGGGG 1 chr2R:19450687-19450807 ( 82) TAGCGGCA 1 chrX:14221297-14221417 ( 84) TAGCGGCA 1 chr2R:15930913-15931033 ( 78) TAGCGGGA 1 chr3R:31711759-31711879 ( 82) TAGCGGGA 1 chr2L:9734884-9735004 ( 54) TAACGGGC 1 chr2L:16276310-16276430 ( 44) TAACTGTG 1 chrX:3373811-3373931 ( 96) TAACGGAT 1 chr2R:12981492-12981612 ( 95) TAACGGAT 1 chr3L:16680614-16680734 ( 59) TAGCGGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.82394 E= 2.3e+001 -1243 -1243 -1243 185 186 -1243 -1243 -1243 169 -1243 -102 -1243 -1243 215 -1243 -1243 -1243 -1243 168 7 -1243 -1243 217 -1243 -192 6 -2 77 108 -164 -102 -23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 55 E= 2.3e+001 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.890909 0.000000 0.109091 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.709091 0.290909 0.000000 0.000000 1.000000 0.000000 0.072727 0.236364 0.218182 0.472727 0.581818 0.072727 0.109091 0.236364 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAACGGYA MEME-4 regular expression -------------------------------------------------------------------------------- TAAC[GT]G[TCG][AT] -------------------------------------------------------------------------------- Time 25.01 secs. ******************************************************************************** ******************************************************************************** MOTIF TTKTTGTT MEME-5 width = 8 sites = 32 llr = 278 E-value = 2.8e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G :151:9:1 matrix T a949a1a9 bits 2.2 2.0 * * * 1.7 * *** 1.5 ** **** Relative 1.3 ** ***** Entropy 1.1 ** ***** (12.5 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTGTTGTT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:11453853-11453973 29 2.23e-05 gctgctgctg ttgttgtt gctgttgcGG chrX:1275007-1275127 108 2.23e-05 GTGCTTGTGC TTGTTGTT TGTGT chrX:619700-619820 46 2.23e-05 CAAATGCAAT TTGTTGTT GAGTCCCGTT chr2L:7038963-7039083 90 2.23e-05 ATTTTCCGTT TTGTTGTT ATTTCTGTCT chrX:11325772-11325892 111 2.23e-05 TTTGTGCTAC TTGTTGTT GA chr3L:3461671-3461791 11 2.23e-05 TATGAGTTTG TTGTTGTT GCCATCCTTG chr3R:30296945-30297065 4 2.23e-05 TTA TTGTTGTT GCTGCGTTTA chrX:9464101-9464221 52 2.23e-05 TAAATTCGCA TTGTTGTT GCTGTTCTTG chrX:19259931-19260051 85 2.23e-05 AACAGTTTCG TTGTTGTT GCAGTTGTCG chrX:10070678-10070798 109 2.23e-05 GTTTGGAGAG TTGTTGTT GATA chrX:5964320-5964440 55 2.23e-05 CATCGAACAG TTGTTGTT ATTCCGTTAC chr3R:11947662-11947782 2 2.23e-05 G TTGTTGTT TGCTCTTCTT chr3R:22727605-22727725 6 2.23e-05 TGCCA TTGTTGTT GTTTTGCATT chrX:19260559-19260679 99 2.23e-05 CAACATATTA TTGTTGTT GCTAGTTGCC chrX:5734971-5735091 61 2.23e-05 GACGTCGTTG TTGTTGTT ATTTTCACTG chr3L:11276114-11276234 44 5.00e-05 TTTTCATTTT TTTTTGTT TCAGATAGGG chr3R:8892631-8892751 39 5.00e-05 ttttttaatt tttttgtt ttttttACTA chr3L:9396140-9396260 79 5.00e-05 TTAACGGCAC TTTTTGTT GCTGCCACTG chr3L:19790096-19790216 43 5.00e-05 ATTCTCCTGT TTTTTGTT GGATTTTTGT chrX:17694672-17694792 99 5.00e-05 ACTTTATTAT TTTTTGTT CGTTGTATTT chrX:3369593-3369713 94 6.79e-05 CTTGGCGAAT Ttgttgtg tgagcatgtg chr3R:21141443-21141563 15 9.01e-05 TTCATCTTTC TTTTTGTG GGGGTGGCTG chr3R:9929297-9929417 88 9.01e-05 GCCGGCCGGC TTTTTGTG CCCAATTAAC chr3L:7979878-7979998 42 9.01e-05 TTTTAAGTGA TTTTTGTG TCTTTTGAGC chr2L:1118662-1118782 95 1.54e-04 CCGTTGGCAA TTGTTTTT GTGTTGTTTG chr2R:10535538-10535658 109 2.33e-04 ttcatttccc tttgtgtt ttcc chr2R:21664921-21665041 15 2.33e-04 TTTACTCATA TTTGTGTT ATCTAAATGA chr2R:10104095-10104215 31 2.33e-04 GTCAGTCAGG TGTTTGTT AAGAGCTCAC chr2R:22925844-22925964 20 2.33e-04 ATTGCCGGAT TGTTTGTT TATTAATCAG chr2L:10987160-10987280 55 2.33e-04 ACCGCTATGA TTTTTTTT CCTAGCTTGA chr3R:16287966-16288086 13 2.33e-04 GTTTTTGTGA TTTTTTTT ACAGCCCCGA chrX:3382252-3382372 112 2.60e-04 GTTTTTATTT TTATTGTT G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:11453853-11453973 2.2e-05 28_[+5]_84 chrX:1275007-1275127 2.2e-05 107_[+5]_5 chrX:619700-619820 2.2e-05 45_[+5]_67 chr2L:7038963-7039083 2.2e-05 89_[+5]_23 chrX:11325772-11325892 2.2e-05 110_[+5]_2 chr3L:3461671-3461791 2.2e-05 10_[+5]_102 chr3R:30296945-30297065 2.2e-05 3_[+5]_109 chrX:9464101-9464221 2.2e-05 51_[+5]_61 chrX:19259931-19260051 2.2e-05 84_[+5]_28 chrX:10070678-10070798 2.2e-05 108_[+5]_4 chrX:5964320-5964440 2.2e-05 54_[+5]_58 chr3R:11947662-11947782 2.2e-05 1_[+5]_111 chr3R:22727605-22727725 2.2e-05 5_[+5]_107 chrX:19260559-19260679 2.2e-05 98_[+5]_14 chrX:5734971-5735091 2.2e-05 60_[+5]_52 chr3L:11276114-11276234 5e-05 43_[+5]_69 chr3R:8892631-8892751 5e-05 38_[+5]_74 chr3L:9396140-9396260 5e-05 78_[+5]_34 chr3L:19790096-19790216 5e-05 42_[+5]_70 chrX:17694672-17694792 5e-05 98_[+5]_14 chrX:3369593-3369713 6.8e-05 93_[+5]_19 chr3R:21141443-21141563 9e-05 14_[+5]_98 chr3R:9929297-9929417 9e-05 87_[+5]_25 chr3L:7979878-7979998 9e-05 41_[+5]_71 chr2L:1118662-1118782 0.00015 94_[+5]_18 chr2R:10535538-10535658 0.00023 108_[+5]_4 chr2R:21664921-21665041 0.00023 14_[+5]_98 chr2R:10104095-10104215 0.00023 30_[+5]_82 chr2R:22925844-22925964 0.00023 19_[+5]_93 chr2L:10987160-10987280 0.00023 54_[+5]_58 chr3R:16287966-16288086 0.00023 12_[+5]_100 chrX:3382252-3382372 0.00026 111_[+5]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTKTTGTT width=8 seqs=32 chrX:11453853-11453973 ( 29) TTGTTGTT 1 chrX:1275007-1275127 ( 108) TTGTTGTT 1 chrX:619700-619820 ( 46) TTGTTGTT 1 chr2L:7038963-7039083 ( 90) TTGTTGTT 1 chrX:11325772-11325892 ( 111) TTGTTGTT 1 chr3L:3461671-3461791 ( 11) TTGTTGTT 1 chr3R:30296945-30297065 ( 4) TTGTTGTT 1 chrX:9464101-9464221 ( 52) TTGTTGTT 1 chrX:19259931-19260051 ( 85) TTGTTGTT 1 chrX:10070678-10070798 ( 109) TTGTTGTT 1 chrX:5964320-5964440 ( 55) TTGTTGTT 1 chr3R:11947662-11947782 ( 2) TTGTTGTT 1 chr3R:22727605-22727725 ( 6) TTGTTGTT 1 chrX:19260559-19260679 ( 99) TTGTTGTT 1 chrX:5734971-5735091 ( 61) TTGTTGTT 1 chr3L:11276114-11276234 ( 44) TTTTTGTT 1 chr3R:8892631-8892751 ( 39) TTTTTGTT 1 chr3L:9396140-9396260 ( 79) TTTTTGTT 1 chr3L:19790096-19790216 ( 43) TTTTTGTT 1 chrX:17694672-17694792 ( 99) TTTTTGTT 1 chrX:3369593-3369713 ( 94) TTGTTGTG 1 chr3R:21141443-21141563 ( 15) TTTTTGTG 1 chr3R:9929297-9929417 ( 88) TTTTTGTG 1 chr3L:7979878-7979998 ( 42) TTTTTGTG 1 chr2L:1118662-1118782 ( 95) TTGTTTTT 1 chr2R:10535538-10535658 ( 109) TTTGTGTT 1 chr2R:21664921-21665041 ( 15) TTTGTGTT 1 chr2R:10104095-10104215 ( 31) TGTTTGTT 1 chr2R:22925844-22925964 ( 20) TGTTTGTT 1 chr2L:10987160-10987280 ( 55) TTTTTTTT 1 chr3R:16287966-16288086 ( 13) TTTTTTTT 1 chrX:3382252-3382372 ( 112) TTATTGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5219 E= 2.8e+001 -1164 -1164 -1164 185 -1164 -1164 -182 176 -314 -1164 126 66 -1164 -1164 -182 176 -1164 -1164 -1164 185 -1164 -1164 203 -156 -1164 -1164 -1164 185 -1164 -1164 -83 166 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 32 E= 2.8e+001 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.062500 0.937500 0.031250 0.000000 0.531250 0.437500 0.000000 0.000000 0.062500 0.937500 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.906250 0.093750 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.125000 0.875000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTGTT MEME-5 regular expression -------------------------------------------------------------------------------- TT[GT]TTGTT -------------------------------------------------------------------------------- Time 30.71 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:17694672-17694792 1.67e-03 98_[+5(5.00e-05)]_14 chr2L:16041866-16041986 3.15e-01 120 chrX:14193152-14193272 4.94e-02 120 chrX:3374408-3374528 4.38e-02 120 chrX:3775272-3775392 1.34e-02 39_[+1(7.38e-05)]_21_[+4(3.26e-05)]_\ 44 chr3L:2378248-2378368 3.49e-02 38_[+1(1.84e-05)]_74 chr3L:7979878-7979998 3.89e-02 41_[+5(9.01e-05)]_71 chrX:1454941-1455061 5.35e-02 72_[+1(7.38e-05)]_40 chr3R:14663411-14663531 1.09e-01 120 chrX:14221297-14221417 1.55e-02 48_[+1(1.84e-05)]_64 chrX:5734971-5735091 3.12e-04 57_[+5(2.23e-05)]_41_[+3(1.85e-05)]_\ 6 chr3L:7935548-7935668 1.19e-02 63_[+1(7.38e-05)]_49 chr2L:9734884-9735004 1.08e-02 120 chr2L:7969487-7969607 2.26e-01 120 chrX:13373999-13374119 8.10e-03 22_[+3(7.85e-05)]_55_[+1(7.38e-05)]_\ 27 chr2R:20998815-20998935 3.15e-02 64_[+4(6.51e-05)]_48 chr3L:7650393-7650513 3.16e-01 120 chrX:3867915-3868035 8.02e-02 79_[+1(1.84e-05)]_33 chrX:5064081-5064201 1.91e-02 120 chrX:18835440-18835560 1.63e-03 59_[+2(4.59e-05)]_19_[+1(1.84e-05)]_\ 26 chr3R:8261413-8261533 7.28e-01 120 chrX:19573818-19573938 4.08e-01 120 chrX:15045706-15045826 3.71e-02 36_[+1(1.84e-05)]_76 chr3L:18071374-18071494 4.19e-02 120 chrX:13735447-13735567 1.34e-03 46_[+2(7.04e-05)]_26_[+1(1.84e-05)]_\ 32 chr3R:16287966-16288086 1.59e-04 3_[+5(9.01e-05)]_20_[+4(1.80e-05)]_\ 81 chrX:10889839-10889959 9.00e-03 67_[+4(1.80e-05)]_45 chrX:1047067-1047187 3.41e-01 120 chrX:7137710-7137830 3.21e-04 60_[+2(4.59e-05)]_17_[+4(1.80e-05)]_\ 27 chr2L:15271454-15271574 8.86e-02 120 chrX:14832044-14832164 3.71e-02 45_[+1(8.85e-05)]_67 chrX:19260559-19260679 1.42e-05 40_[+1(1.84e-05)]_37_[+3(1.85e-05)]_\ 5_[+5(2.23e-05)]_14 chrX:11894364-11894484 4.45e-01 120 chr2R:10569412-10569532 2.11e-02 120 chr2R:7782073-7782193 1.20e-02 56_[+1(1.84e-05)]_15_[+1(8.85e-05)]_\ 33 chr2L:10987160-10987280 8.09e-03 120 chr3R:15993924-15994044 5.70e-02 17_[+4(3.26e-05)]_95 chr2R:12981492-12981612 6.29e-04 11_[+3(1.85e-05)]_36_[+1(7.38e-05)]_\ 57 chrX:3382252-3382372 3.58e-03 58_[+1(7.38e-05)]_54 chr3L:18044427-18044547 4.30e-01 120 chrX:154295-154415 1.88e-01 120 chr3R:15289983-15290103 6.00e-03 16_[+4(1.80e-05)]_96 chrX:4119751-4119871 9.48e-01 120 chr3R:9704343-9704463 2.60e-04 53_[+4(1.80e-05)]_59 chr2R:14871551-14871671 6.93e-02 120 chrX:8490410-8490530 7.69e-02 82_[+1(7.38e-05)]_30 chr3R:8934970-8935090 1.68e-01 120 chr3R:7913854-7913974 5.25e-02 105_[+4(8.75e-05)]_7 chrX:14225798-14225918 7.46e-02 56_[+1(1.84e-05)]_56 chr2L:4982212-4982332 7.77e-02 49_[+1(1.84e-05)]_63 chrX:3688437-3688557 1.53e-03 53_[+4(1.80e-05)]_59 chrX:10890902-10891022 4.52e-01 120 chrX:8046671-8046791 2.73e-02 14_[+1(1.84e-05)]_4_[+1(1.84e-05)]_\ 86 chrX:14833013-14833133 6.44e-01 120 chrX:1341669-1341789 5.59e-02 120 chrX:1041503-1041623 4.43e-03 22_[+2(1.51e-05)]_90 chrX:9601436-9601556 1.74e-04 47_[+2(5.83e-05)]_6_[+4(1.80e-05)]_\ 21_[+2(7.04e-05)]_22 chr2R:5702457-5702577 2.92e-01 120 chr3L:19790096-19790216 1.73e-01 42_[+5(5.00e-05)]_3_[+5(9.01e-05)]_\ 59 chr2R:17850209-17850329 1.25e-01 120 chr2L:20761139-20761259 2.30e-01 120 chr3L:9504679-9504799 2.44e-03 36_[+4(4.70e-05)]_76 chrX:2685684-2685804 3.99e-03 47_[+1(7.38e-05)]_65 chr2R:24790162-24790282 1.38e-03 25_[+1(1.84e-05)]_15_[+2(8.89e-05)]_\ 64 chr2L:6611525-6611645 3.33e-03 98_[+2(1.51e-05)]_[+2(1.51e-05)]_6 chr2R:23632821-23632941 7.68e-02 120 chr3R:31711759-31711879 6.73e-03 33_[+3(1.85e-05)]_79 chr2R:7786338-7786458 2.07e-01 42_[+1(1.84e-05)]_70 chr2R:10416902-10417022 3.92e-03 38_[+1(1.84e-05)]_74 chr2L:13204281-13204401 1.09e-02 44_[+4(6.51e-05)]_38_[+4(1.80e-05)]_\ 22 chrX:3369593-3369713 5.25e-02 93_[+5(6.79e-05)]_19 chr3L:3338593-3338713 3.81e-01 120 chr3R:20960115-20960235 2.88e-01 120 chr3R:30782686-30782806 2.24e-04 22_[+2(1.51e-05)]_39_[+3(1.85e-05)]_\ 43 chrX:15063120-15063240 9.35e-02 63_[+1(1.84e-05)]_49 chr3L:1537501-1537621 4.48e-06 74_[+4(1.80e-05)]_8_[+2(1.51e-05)]_\ 11_[+2(1.51e-05)]_3 chr3R:29139109-29139229 7.57e-03 29_[+4(1.80e-05)]_83 chrX:2076286-2076406 3.19e-03 120 chr2R:21161120-21161240 1.60e-01 36_[+1(1.84e-05)]_76 chrX:5893770-5893890 1.33e-01 120 chr3R:27926082-27926202 7.57e-02 120 chr3R:26979134-26979254 6.83e-02 120 chr3R:13305103-13305223 1.02e-01 30_[+1(8.85e-05)]_82 chrX:15306100-15306220 9.52e-03 29_[+1(1.84e-05)]_83 chr2L:16276310-16276430 9.01e-02 120 chr2R:12034809-12034929 5.29e-03 42_[+4(1.80e-05)]_70 chr3R:22727605-22727725 1.03e-05 5_[+5(2.23e-05)]_39_[+1(1.84e-05)]_\ 17_[+1(7.38e-05)]_25_[+2(1.51e-05)]_2 chr3L:9396140-9396260 1.12e-02 57_[+5(5.00e-05)]_4_[+4(3.26e-05)]_\ 1_[+5(5.00e-05)]_34 chr2L:13779697-13779817 2.29e-03 47_[+4(1.80e-05)]_65 chr3R:11947662-11947782 6.27e-05 1_[+5(2.23e-05)]_111 chr3L:11938853-11938973 2.67e-04 3_[+1(8.85e-05)]_42_[+1(1.84e-05)]_\ 5_[+4(3.26e-05)]_46 chr3R:9929297-9929417 3.26e-03 65_[+1(1.84e-05)]_14_[+5(9.01e-05)]_\ 25 chrX:22515208-22515328 5.35e-03 75_[+4(1.80e-05)]_37 chrX:16569518-16569638 1.26e-01 120 chr2L:2888183-2888303 4.31e-03 51_[+4(1.80e-05)]_61 chrX:15075608-15075728 2.07e-02 60_[+4(4.70e-05)]_52 chrX:470727-470847 4.80e-02 53_[+4(4.70e-05)]_59 chr3L:18950470-18950590 6.53e-03 49_[+2(1.51e-05)]_63 chrX:5964320-5964440 3.63e-03 54_[+5(2.23e-05)]_58 chr2R:14295707-14295827 1.44e-01 120 chr2R:11105692-11105812 1.55e-01 120 chr3R:13971532-13971652 3.75e-01 120 chrX:9395011-9395131 5.96e-02 120 chr2L:7809023-7809143 2.35e-03 87_[+2(1.51e-05)]_25 chrX:8489395-8489515 4.22e-02 120 chr2L:3348626-3348746 4.70e-04 71_[+4(1.80e-05)]_41 chr3R:29158287-29158407 7.99e-04 55_[+4(1.80e-05)]_57 chr3L:18819011-18819131 3.81e-01 101_[+4(8.75e-05)]_11 chr3R:16095037-16095157 6.67e-02 5_[+2(4.59e-05)]_107 chrX:12905805-12905925 3.11e-02 [+2(7.04e-05)]_112 chrX:19608632-19608752 4.12e-03 39_[+2(1.51e-05)]_6_[+2(4.59e-05)]_\ 59 chr2R:22373015-22373135 3.06e-03 47_[+1(1.84e-05)]_65 chr2L:14221348-14221468 2.46e-01 120 chrX:3373811-3373931 1.74e-03 46_[+2(1.51e-05)]_66 chr2R:22806351-22806471 6.29e-03 120 chrX:1904092-1904212 2.09e-01 28_[+1(7.38e-05)]_84 chr3R:16625781-16625901 4.76e-03 62_[+3(6.36e-05)]_50 chr2L:20061739-20061859 3.10e-01 120 chrX:5063270-5063390 2.65e-01 120 chr2L:21238198-21238318 5.45e-02 63_[+1(1.84e-05)]_49 chrX:22480703-22480823 6.66e-03 62_[+1(1.84e-05)]_50 chrX:1321824-1321944 3.49e-05 43_[+4(1.80e-05)]_19_[+4(1.80e-05)]_\ 42 chr2R:6631824-6631944 3.62e-02 120 chr2R:1081383-1081503 4.72e-02 120 chr3R:14060033-14060153 3.31e-01 120 chr2R:21183922-21184042 1.17e-01 120 chr2R:7767675-7767795 7.93e-02 72_[+1(8.85e-05)]_40 chrX:17102239-17102359 5.87e-02 29_[+4(8.75e-05)]_83 chr3R:5658973-5659093 2.47e-02 7_[+3(6.36e-05)]_105 chr3L:7806917-7807037 1.27e-02 120 chrX:19148962-19149082 7.57e-02 120 chrX:13752762-13752882 9.11e-03 89_[+3(1.85e-05)]_23 chrX:4677858-4677978 9.38e-01 120 chr2L:21220572-21220692 1.78e-03 68_[+1(1.84e-05)]_44 chr3L:18627520-18627640 1.98e-03 35_[+3(6.36e-05)]_77 chr3R:29766248-29766368 1.60e-02 68_[+1(1.84e-05)]_44 chr2R:11660721-11660841 9.91e-02 120 chr2R:17843298-17843418 3.37e-03 16_[+4(3.26e-05)]_13_[+3(1.85e-05)]_\ 75 chr2R:6647975-6648095 1.08e-01 64_[+1(7.38e-05)]_48 chr2R:10777052-10777172 1.68e-02 69_[+2(5.83e-05)]_35_[+3(6.36e-05)] chr3L:8684838-8684958 6.03e-02 120 chrX:21120330-21120450 7.76e-01 120 chr3R:9532572-9532692 4.55e-01 120 chrX:11679327-11679447 2.47e-02 120 chr2R:22941029-22941149 1.08e-02 73_[+4(1.80e-05)]_39 chrX:16694673-16694793 6.14e-03 71_[+2(1.51e-05)]_41 chr2L:16530821-16530941 2.04e-05 73_[+4(1.80e-05)]_17_[+2(1.51e-05)]_\ 14 chr3L:15108610-15108730 1.71e-02 120 chrX:2298110-2298230 2.15e-01 120 chr3R:24925376-24925496 3.26e-02 66_[+4(3.26e-05)]_46 chrX:19475023-19475143 7.17e-01 120 chrX:10070678-10070798 5.64e-04 108_[+5(2.23e-05)]_4 chrX:12463993-12464113 8.36e-02 120 chr3R:21853026-21853146 7.82e-03 79_[+1(1.84e-05)]_33 chrX:927631-927751 1.04e-04 5_[+2(1.51e-05)]_40_[+4(1.80e-05)]_\ 59 chrX:18374785-18374905 2.09e-02 70_[+1(7.38e-05)]_42 chrX:10325373-10325493 1.18e-04 21_[+3(1.85e-05)]_34_[+1(1.84e-05)]_\ 49 chrX:19259931-19260051 5.81e-05 57_[+3(1.85e-05)]_19_[+5(2.23e-05)]_\ 20_[+4(8.75e-05)] chr3L:12179052-12179172 1.30e-01 120 chrX:9465920-9466040 3.62e-02 120 chr2R:5413443-5413563 7.13e-03 36_[+3(1.85e-05)]_76 chrX:2738847-2738967 1.61e-01 79_[+1(7.38e-05)]_33 chr3L:6976066-6976186 2.40e-03 120 chr3R:29868464-29868584 1.46e-02 65_[+1(1.84e-05)]_47 chr2R:16730620-16730740 2.83e-04 74_[+3(6.36e-05)]_38 chr2L:11001297-11001417 1.21e-01 120 chr3L:8412890-8413010 4.87e-02 120 chr2R:22645805-22645925 3.34e-01 120 chr2R:15930913-15931033 3.77e-02 120 chr2R:20670485-20670605 1.34e-02 49_[+4(6.51e-05)]_63 chrX:21311769-21311889 6.65e-01 120 chr2L:19571070-19571190 1.16e-01 120 chr2R:22925844-22925964 2.05e-01 120 chr2L:1118662-1118782 2.27e-02 97_[+5(9.01e-05)]_15 chr3L:9974605-9974725 1.17e-01 69_[+3(6.36e-05)]_43 chr2L:7000709-7000829 1.63e-01 120 chrX:5056137-5056257 3.97e-04 [+2(1.51e-05)]_95_[+4(8.75e-05)]_9 chrX:9464101-9464221 1.75e-03 51_[+5(2.23e-05)]_34_[+3(6.36e-05)]_\ 19 chrX:1276220-1276340 2.46e-02 120 chr3R:14739960-14740080 2.46e-03 14_[+2(7.04e-05)]_3_[+2(1.51e-05)]_\ 63_[+2(1.51e-05)]_16 chr3R:24860543-24860663 1.95e-01 120 chr3R:21141443-21141563 4.69e-04 14_[+5(9.01e-05)]_18_[+1(1.84e-05)]_\ 44_[+4(6.51e-05)]_20 chr3R:30296945-30297065 1.60e-03 3_[+5(2.23e-05)]_109 chrX:17627308-17627428 3.03e-03 120 chrX:11682247-11682367 8.91e-06 6_[+3(7.85e-05)]_4_[+3(1.85e-05)]_1_\ [+3(1.85e-05)]_4_[+3(1.85e-05)]_20_[+4(1.80e-05)]_45 chr2R:21549404-21549524 6.12e-01 120 chr2R:10104095-10104215 3.38e-04 55_[+1(7.38e-05)]_57 chr2R:5421033-5421153 2.72e-01 120 chrX:5061899-5062019 4.78e-01 120 chr2R:19300129-19300249 7.59e-03 12_[+3(1.85e-05)]_100 chr3R:13729041-13729161 4.51e-02 120 chrX:12012619-12012739 4.17e-05 20_[+3(1.85e-05)]_60_[+4(1.80e-05)]_\ 24 chr3L:3461671-3461791 1.13e-02 7_[+5(2.23e-05)]_105 chr2L:7050872-7050992 4.43e-03 33_[+3(1.85e-05)]_31_[+4(4.70e-05)]_\ 40 chr3R:27111773-27111893 1.66e-02 120 chr2R:16582795-16582915 4.22e-01 120 chrX:278933-279053 1.99e-05 34_[+4(1.80e-05)]_43_[+2(1.51e-05)]_\ 12_[+1(7.38e-05)]_7 chrX:12718686-12718806 3.30e-02 120 chrX:6727211-6727331 8.97e-01 120 chr2R:21664921-21665041 1.46e-02 120 chr2L:1157285-1157405 7.87e-02 42_[+1(7.38e-05)]_70 chr3R:14736800-14736920 1.97e-02 13_[+4(6.51e-05)]_99 chr2R:6971040-6971160 4.83e-03 13_[+2(2.73e-05)]_99 chr3R:25056905-25057025 5.56e-01 120 chrX:7959514-7959634 8.72e-02 67_[+1(1.84e-05)]_45 chrX:8093385-8093505 2.12e-01 120 chr3L:7834146-7834266 5.46e-01 120 chr2L:8433759-8433879 9.68e-03 47_[+4(3.26e-05)]_65 chr3L:12203908-12204028 1.27e-02 68_[+4(6.51e-05)]_44 chr2R:19450687-19450807 1.05e-01 120 chr3R:15901099-15901219 5.57e-01 120 chrX:11325772-11325892 2.56e-03 98_[+5(9.01e-05)]_4_[+5(2.23e-05)]_\ 2 chr3L:8997298-8997418 8.42e-01 120 chr3L:16680614-16680734 2.69e-03 9_[+3(6.36e-05)]_103 chrX:11805150-11805270 2.26e-02 74_[+1(1.84e-05)]_38 chr3R:20714445-20714565 3.16e-02 31_[+1(1.84e-05)]_15_[+1(7.38e-05)]_\ 58 chrX:4937386-4937506 2.83e-06 46_[+4(1.80e-05)]_14_[+2(1.51e-05)]_\ [+2(1.51e-05)]_20_[+3(6.36e-05)]_8 chr3R:27928207-27928327 1.10e-01 26_[+4(6.51e-05)]_86 chr2R:18811485-18811605 3.44e-01 120 chrX:3448425-3448545 2.56e-02 78_[+3(6.36e-05)]_34 chrX:9599196-9599316 1.48e-03 18_[+4(1.80e-05)]_94 chr2R:10535538-10535658 3.90e-02 120 chrX:21520657-21520777 2.55e-01 120 chr3R:20958927-20959047 7.13e-03 108_[+2(4.59e-05)]_4 chr3R:8892631-8892751 6.65e-02 38_[+5(5.00e-05)]_74 chrX:16893163-16893283 3.49e-01 120 chrX:20251720-20251840 5.61e-03 42_[+4(4.70e-05)]_36_[+2(1.51e-05)]_\ 26 chr3L:20827982-20828102 2.85e-03 61_[+4(1.80e-05)]_51 chr2L:481496-481616 1.10e-01 46_[+1(1.84e-05)]_66 chr3L:18046102-18046222 3.01e-01 120 chrX:1620042-1620162 2.09e-01 37_[+1(7.38e-05)]_75 chr3L:11276114-11276234 9.80e-02 43_[+5(5.00e-05)]_69 chr2L:7038963-7039083 4.24e-03 51_[+1(1.84e-05)]_30_[+5(2.23e-05)]_\ 23 chr2L:5006491-5006611 1.04e-01 120 chr2R:7257934-7258054 6.87e-02 120 chr2L:13094076-13094196 1.68e-02 120 chr3L:9374493-9374613 8.80e-01 120 chr3L:2418520-2418640 4.77e-02 120 chrX:15333744-15333864 2.10e-01 59_[+4(4.70e-05)]_53 chrX:619700-619820 3.75e-03 45_[+5(2.23e-05)]_67 chr2L:17496966-17497086 4.65e-02 37_[+1(1.84e-05)]_75 chrX:1275007-1275127 1.93e-02 107_[+5(2.23e-05)]_5 chrX:12721400-12721520 4.57e-01 120 chrX:11426132-11426252 1.79e-02 34_[+4(8.75e-05)]_78 chrX:4679012-4679132 6.40e-02 36_[+2(2.73e-05)]_76 chrX:21375234-21375354 2.18e-01 120 chr2L:4185370-4185490 3.39e-02 120 chr2L:19530299-19530419 4.05e-03 62_[+3(6.36e-05)]_50 chrX:10772443-10772563 9.49e-02 59_[+1(7.38e-05)]_53 chrX:11453853-11453973 3.85e-03 28_[+5(2.23e-05)]_84 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n11.farnam.hpc.yale.internal ********************************************************************************