******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/insv.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3L:21878428-21878548 1.0000 120 chrX:16102958-16103078 1.0000 120 chrX:3187732-3187852 1.0000 120 chr3R:13842671-13842791 1.0000 120 chr2L:15746121-15746241 1.0000 120 chr2L:1979542-1979662 1.0000 120 chrX:8525896-8526016 1.0000 120 chrX:9117970-9118090 1.0000 120 chr2L:20429563-20429683 1.0000 120 chr3L:20603896-20604016 1.0000 120 chr2R:24345042-24345162 1.0000 120 chr2L:10291418-10291538 1.0000 120 chr3R:6707892-6708012 1.0000 120 chr3L:2586943-2587063 1.0000 120 chrX:13104678-13104798 1.0000 120 chr2R:16187016-16187136 1.0000 120 chr3R:13422317-13422437 1.0000 120 chrX:1775366-1775486 1.0000 120 chr2R:17498848-17498968 1.0000 120 chr3R:13056692-13056812 1.0000 120 chr2L:15306937-15307057 1.0000 120 chr3L:8066851-8066971 1.0000 120 chr2R:17849729-17849849 1.0000 120 chrX:18611848-18611968 1.0000 120 chr2R:25175653-25175773 1.0000 120 chr2R:11747571-11747691 1.0000 120 chr2R:8066592-8066712 1.0000 120 chr2R:16586842-16586962 1.0000 120 chr3L:15276347-15276467 1.0000 120 chr3R:18156728-18156848 1.0000 120 chr2R:23204699-23204819 1.0000 120 chr3L:5998401-5998521 1.0000 120 chr3L:20715823-20715943 1.0000 120 chr2R:24291079-24291199 1.0000 120 chr3R:29143595-29143715 1.0000 120 chr3L:7714158-7714278 1.0000 120 chr3L:12417855-12417975 1.0000 120 chr3L:14970352-14970472 1.0000 120 chr2R:7939854-7939974 1.0000 120 chrX:6802514-6802634 1.0000 120 chr2R:5885083-5885203 1.0000 120 chr2R:12965753-12965873 1.0000 120 chr2R:19422386-19422506 1.0000 120 chr3L:7364870-7364990 1.0000 120 chr3L:805337-805457 1.0000 120 chr2L:5092746-5092866 1.0000 120 chr3R:24945561-24945681 1.0000 120 chr2R:17581863-17581983 1.0000 120 chrX:5537102-5537222 1.0000 120 chr3R:13056899-13057019 1.0000 120 chrX:15566178-15566298 1.0000 120 chrX:8114979-8115099 1.0000 120 chrX:7606533-7606653 1.0000 120 chr3L:16417354-16417474 1.0000 120 chrX:9121594-9121714 1.0000 120 chr2R:23236970-23237090 1.0000 120 chrX:15840142-15840262 1.0000 120 chr3L:5359736-5359856 1.0000 120 chrX:17108145-17108265 1.0000 120 chr3L:12749074-12749194 1.0000 120 chr3L:16485311-16485431 1.0000 120 chrX:10931395-10931515 1.0000 120 chr3L:11020206-11020326 1.0000 120 chrX:3186643-3186763 1.0000 120 chr3L:16417154-16417274 1.0000 120 chrX:10324101-10324221 1.0000 120 chr3L:19663018-19663138 1.0000 120 chr3R:13981084-13981204 1.0000 120 chr2L:11955972-11956092 1.0000 120 chr3L:3619011-3619131 1.0000 120 chr3R:8464007-8464127 1.0000 120 chr3L:14618591-14618711 1.0000 120 chrX:22535906-22536026 1.0000 120 chrX:15875672-15875792 1.0000 120 chr2R:1340044-1340164 1.0000 120 chr3L:416494-416614 1.0000 120 chrX:9282137-9282257 1.0000 120 chrX:5697818-5697938 1.0000 120 chr3L:10321507-10321627 1.0000 120 chrX:12658569-12658689 1.0000 120 chr2R:7008690-7008810 1.0000 120 chr2L:8304761-8304881 1.0000 120 chrX:13256546-13256666 1.0000 120 chrX:15696974-15697094 1.0000 120 chr3L:15517925-15518045 1.0000 120 chr2L:15043876-15043996 1.0000 120 chr3R:19902435-19902555 1.0000 120 chr2R:24347106-24347226 1.0000 120 chrX:4199021-4199141 1.0000 120 chr2L:12603496-12603616 1.0000 120 chrX:9634382-9634502 1.0000 120 chr3R:32050810-32050930 1.0000 120 chrX:10386356-10386476 1.0000 120 chr3L:6653196-6653316 1.0000 120 chr2R:20029353-20029473 1.0000 120 chr3R:9710341-9710461 1.0000 120 chrX:8721599-8721719 1.0000 120 chr2L:5366932-5367052 1.0000 120 chr2L:6356791-6356911 1.0000 120 chrX:6255079-6255199 1.0000 120 chr3L:18105463-18105583 1.0000 120 chrX:2221709-2221829 1.0000 120 chrX:9131391-9131511 1.0000 120 chr2R:16572137-16572257 1.0000 120 chrX:3578988-3579108 1.0000 120 chr3R:11344099-11344219 1.0000 120 chr3R:19939327-19939447 1.0000 120 chr3L:3290930-3291050 1.0000 120 chr3L:22742473-22742593 1.0000 120 chrX:12613334-12613454 1.0000 120 chr2R:7473447-7473567 1.0000 120 chr2R:13448666-13448786 1.0000 120 chr3R:13286268-13286388 1.0000 120 chr3R:23889257-23889377 1.0000 120 chr2L:6820242-6820362 1.0000 120 chr3R:9379525-9379645 1.0000 120 chr2L:447241-447361 1.0000 120 chr3L:4133307-4133427 1.0000 120 chrX:12632122-12632242 1.0000 120 chrX:12940535-12940655 1.0000 120 chrX:16648529-16648649 1.0000 120 chr3R:14037483-14037603 1.0000 120 chr2L:10647873-10647993 1.0000 120 chr3L:21035394-21035514 1.0000 120 chr2R:12885214-12885334 1.0000 120 chrX:6540081-6540201 1.0000 120 chrX:9165021-9165141 1.0000 120 chr3R:14026297-14026417 1.0000 120 chrX:7196973-7197093 1.0000 120 chr3L:11126238-11126358 1.0000 120 chrX:7522066-7522186 1.0000 120 chrX:836079-836199 1.0000 120 chr3R:5995486-5995606 1.0000 120 chrX:19642885-19643005 1.0000 120 chr3L:11876202-11876322 1.0000 120 chr2L:12201097-12201217 1.0000 120 chr2L:9121051-9121171 1.0000 120 chrX:16839151-16839271 1.0000 120 chr2L:2577227-2577347 1.0000 120 chr3L:3593661-3593781 1.0000 120 chr3R:17795675-17795795 1.0000 120 chr3R:16898514-16898634 1.0000 120 chrX:19191165-19191285 1.0000 120 chrX:8100818-8100938 1.0000 120 chr3R:19939081-19939201 1.0000 120 chr3R:26007468-26007588 1.0000 120 chr3L:18015308-18015428 1.0000 120 chr2R:17815290-17815410 1.0000 120 chr2R:10669858-10669978 1.0000 120 chrX:7252627-7252747 1.0000 120 chr2L:20310705-20310825 1.0000 120 chr2R:20832976-20833096 1.0000 120 chrX:8908316-8908436 1.0000 120 chrX:9165224-9165344 1.0000 120 chr3L:14488804-14488924 1.0000 120 chr3L:21706658-21706778 1.0000 120 chrX:16104173-16104293 1.0000 120 chr2L:13219452-13219572 1.0000 120 chr3R:20543852-20543972 1.0000 120 chr3L:171741-171861 1.0000 120 chrX:6678823-6678943 1.0000 120 chr3R:6999293-6999413 1.0000 120 chr2R:25076236-25076356 1.0000 120 chrX:17336576-17336696 1.0000 120 chrX:21056868-21056988 1.0000 120 chr3R:26040992-26041112 1.0000 120 chrX:13277284-13277404 1.0000 120 chr2L:8683366-8683486 1.0000 120 chrX:20632322-20632442 1.0000 120 chr3R:11345288-11345408 1.0000 120 chrX:170760-170880 1.0000 120 chrX:3288566-3288686 1.0000 120 chrX:9110270-9110390 1.0000 120 chr2L:9522456-9522576 1.0000 120 chrX:12940755-12940875 1.0000 120 chr2R:17394106-17394226 1.0000 120 chr3L:11020418-11020538 1.0000 120 chr3L:15008784-15008904 1.0000 120 chrX:9282355-9282475 1.0000 120 chr3L:5878865-5878985 1.0000 120 chr3L:3198536-3198656 1.0000 120 chrX:451807-451927 1.0000 120 chr3R:16730834-16730954 1.0000 120 chr3R:9880252-9880372 1.0000 120 chr3R:29043233-29043353 1.0000 120 chr3R:11345062-11345182 1.0000 120 chr3L:12399572-12399692 1.0000 120 chrX:7197174-7197294 1.0000 120 chr3L:15268334-15268454 1.0000 120 chr2R:16841377-16841497 1.0000 120 chr2L:20488730-20488850 1.0000 120 chr3R:21640925-21641045 1.0000 120 chr2L:6076256-6076376 1.0000 120 chr3R:10048598-10048718 1.0000 120 chrX:6080659-6080779 1.0000 120 chrX:12633349-12633469 1.0000 120 chr3L:14950068-14950188 1.0000 120 chr3R:4969515-4969635 1.0000 120 chr2R:18819827-18819947 1.0000 120 chrX:6701094-6701214 1.0000 120 chr2L:18598257-18598377 1.0000 120 chr2L:8297165-8297285 1.0000 120 chr3R:15367607-15367727 1.0000 120 chr3R:7549497-7549617 1.0000 120 chrX:16648245-16648365 1.0000 120 chr2L:5270666-5270786 1.0000 120 chr3R:30000377-30000497 1.0000 120 chr3R:23733661-23733781 1.0000 120 chr2R:2589649-2589769 1.0000 120 chr2R:10675006-10675126 1.0000 120 chr2R:12343834-12343954 1.0000 120 chrX:16587428-16587548 1.0000 120 chr3L:5879065-5879185 1.0000 120 chr3R:24580079-24580199 1.0000 120 chr2R:19481265-19481385 1.0000 120 chr2L:3422933-3423053 1.0000 120 chr3R:9418508-9418628 1.0000 120 chr2L:10646854-10646974 1.0000 120 chr2R:9231469-9231589 1.0000 120 chr3L:15172970-15173090 1.0000 120 chr3R:20543651-20543771 1.0000 120 chrX:15817025-15817145 1.0000 120 chr3R:17938520-17938640 1.0000 120 chr4:570522-570642 1.0000 120 chr3L:20918631-20918751 1.0000 120 chrX:6701293-6701413 1.0000 120 chrX:15449502-15449622 1.0000 120 chr2L:9454822-9454942 1.0000 120 chrX:11156128-11156248 1.0000 120 chr3R:22396842-22396962 1.0000 120 chr2R:9968579-9968699 1.0000 120 chr2R:17849941-17850061 1.0000 120 chr2L:10648072-10648192 1.0000 120 chrX:18516555-18516675 1.0000 120 chr2R:23204898-23205018 1.0000 120 chr3R:30467200-30467320 1.0000 120 chr3L:17998138-17998258 1.0000 120 chr3L:3782742-3782862 1.0000 120 chrX:2354429-2354549 1.0000 120 chrX:16101699-16101819 1.0000 120 chr3R:11619235-11619355 1.0000 120 chr3L:2864560-2864680 1.0000 120 chr3L:22792142-22792262 1.0000 120 chr3L:19908220-19908340 1.0000 120 chr3L:10321712-10321832 1.0000 120 chr2L:8300346-8300466 1.0000 120 chr2R:6450280-6450400 1.0000 120 chr2R:12886924-12887044 1.0000 120 chr3R:15246762-15246882 1.0000 120 chr3R:29774933-29775053 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_insv/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/insv.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.298 C 0.202 G 0.208 T 0.291 Background letter frequencies (from file dataset with add-one prior applied): A 0.298 C 0.202 G 0.208 T 0.291 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CYAATTRG MEME-1 width = 8 sites = 203 llr = 1493 E-value = 1.7e-154 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :189:14: pos.-specific C a6:::3:: probability G ::11::6a matrix T :31:a7:: bits 2.3 * 2.1 * * 1.8 * * 1.6 * * * Relative 1.4 * ** * Entropy 1.2 * ** * (10.6 bits) 0.9 * *** ** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCAATTGG consensus T CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:15246762-15246882 27 1.33e-05 GTGTGGTTTC CCAATTGG AGTAGCTGAT chr2R:12886924-12887044 38 1.33e-05 GATTACGAAT CCAATTGG AACCACGCGT chrX:11156128-11156248 57 1.33e-05 AAGACCGATT CCAATTGG AATCCAAACT chrX:6701293-6701413 27 1.33e-05 AATTGATATT CCAATTGG TTTCAAATTT chr4:570522-570642 27 1.33e-05 CAACGAGTTT CCAATTGG ACAAATATAA chr3R:17938520-17938640 28 1.33e-05 GGAAATCAAT CCAATTGG ATTGCTCCTT chr2L:3422933-3423053 63 1.33e-05 GCTGCCGATT CCAATTGG ACTTGGGTGT chr2L:8297165-8297285 18 1.33e-05 AACTCCGCTT CCAATTGG AACGGCATAA chr2L:6076256-6076376 45 1.33e-05 GAATTTCCCT CCAATTGG ATTCAATGGG chrX:7197174-7197294 17 1.33e-05 GAAACGTATG CCAATTGG AAGTTGGCAT chr3R:11345062-11345182 56 1.33e-05 TGAGGGCATT CCAATTGG AGTTGCGGCG chr3R:9880252-9880372 84 1.33e-05 ATGCAGCACT CCAATTGG AAGCTATAAA chrX:9110270-9110390 46 1.33e-05 TTCTCCTTTT CCAATTGG AAACCCTTTG chrX:21056868-21056988 32 1.33e-05 AGTTCCGCTT CCAATTGG ATTACGACCA chrX:6678823-6678943 98 1.33e-05 GCGCGCGACT CCAATTGG AAGCCGTCGC chr3L:171741-171861 33 1.33e-05 ACAAGGTTTT CCAATTGG GAATTTTCAA chrX:8908316-8908436 91 1.33e-05 GTCCCCAATT CCAATTGG AAGTGAGAGA chr2L:20310705-20310825 48 1.33e-05 TCCCTCAACT CCAATTGG AACGGCTGAT chr3R:16898514-16898634 64 1.33e-05 GGACGCATTT CCAATTGG GAAAGAAACC chr3L:11126238-11126358 57 1.33e-05 GAGCGCGTTT CCAATTGG ATTTGGTTTT chrX:7196973-7197093 91 1.33e-05 GCTAGAGATT CCAATTGG TGAATGTGTG chr3R:23889257-23889377 49 1.33e-05 CAGCAGGAGT CCAATTGG AAACATACAA chrX:6255079-6255199 33 1.33e-05 tgCCCCGTTT CCAATTGG AAACGGTTCA chr2R:20029353-20029473 72 1.33e-05 CCATCAAAAG CCAATTGG AGAATATTGA chrX:9634382-9634502 68 1.33e-05 CAATTAGAAT CCAATTGG GGGGCTGGCG chr2L:12603496-12603616 44 1.33e-05 TTCTTAACTT CCAATTGG AGGAGAACTC chrX:9282137-9282257 60 1.33e-05 ATACAAAAGT CCAATTGG ACTGGACAAG chr2R:1340044-1340164 60 1.33e-05 TTTAAATTGT CCAATTGG TTTTATTTTA chr2L:11955972-11956092 95 1.33e-05 CAACTGGAAA CCAATTGG CATTTCAATC chr3R:13981084-13981204 28 1.33e-05 ATTTCAGTTT CCAATTGG AGGGCCAACG chrX:10324101-10324221 60 1.33e-05 CGATTTGCGT CCAATTGG ACTGATGCGA chr2R:23236970-23237090 29 1.33e-05 AAACACCACG CCAATTGG AAGACAGGGA chrX:9121594-9121714 58 1.33e-05 AATTGGTAGT CCAATTGG ACGCCTAATT chr3R:24945561-24945681 109 1.33e-05 ACCCAGAGCT CCAATTGG ATTC chr3R:18156728-18156848 18 1.33e-05 ATTAGATTTT CCAATTGG ACTTTGCAGT chr2L:15306937-15307057 42 1.33e-05 CAACTCTGTT CCAATTGG AAACATTTGT chr3R:13056692-13056812 70 1.33e-05 TTTCCGGTTT CCAATTGG ATATTGTTGC chrX:13104678-13104798 67 1.33e-05 TCACCGTACA CCAATTGG AATGGGAACA chr3L:2586943-2587063 99 1.33e-05 CACTTCTCAT CCAATTGG CAAGTGCTCG chr2L:10291418-10291538 33 1.33e-05 ATTGGATTAG CCAATTGG ATAAGAAATC chr3L:20603896-20604016 94 1.33e-05 GAATACCATG CCAATTGG CTTAGTTCGT chr2L:20429563-20429683 48 1.33e-05 GTTTTCCAGT CCAATTGG ATTATGCCCG chrX:3187732-3187852 61 1.33e-05 CGATTCGATG CCAATTGG ACTCTCTCTT chr2R:19481265-19481385 31 2.25e-05 ATGGtcgaat ccaatcgg atcgctcgga chr2R:12343834-12343954 9 2.25e-05 AGCGACAT CCAATCGG AATGTCAATC chrX:2221709-2221829 8 2.25e-05 CACACTT CCAATCGG ACAGGTTGAT chr2L:5366932-5367052 82 2.25e-05 CAAATGGATT CCAATCGG ATTCGATGCT chrX:10386356-10386476 82 2.25e-05 GCCAAAAATT CCAATCGG AATTCTGGAA chrX:8114979-8115099 86 2.25e-05 TTGCGTTTGT CCAATCGG AATGGGTGTA chrX:1775366-1775486 65 2.25e-05 GAAACAGAAT CCAATCGG AAGGAGAGGA chr3L:19908220-19908340 53 4.15e-05 GGCAGCGAAT CCAATTAG AATGAGCACC chr3R:30467200-30467320 103 4.15e-05 AAATACTTAA CCAATTAG ACTCTGGTTT chr2L:5270666-5270786 113 4.15e-05 ATATGAATGT CCAATTAG chr2L:18598257-18598377 46 4.15e-05 TCTGGAATTT CCAATTAG CATTTTTCTG chrX:7522066-7522186 76 4.15e-05 AGCAGTTTAG CCAATTAG ATGATGTACA chr3R:9379525-9379645 56 4.15e-05 GGCCGCATCT CCAATTAG AACTCGTGCA chrX:3578988-3579108 45 4.15e-05 ccaacacatt ccaattag ctgcaattca chr3R:32050810-32050930 40 4.15e-05 GATTCAAATT CCAATTAG AAGTGTCGAA chrX:4199021-4199141 60 4.15e-05 AAGACATAAT CCAATTAG CAATTAGTTG chr3L:416494-416614 85 4.15e-05 GACTGCAGTT CCAATTAG TCACATTACA chrX:6802514-6802634 46 4.15e-05 AGGATAAATT CCAATTAG GATGACAGCC chr3L:8066851-8066971 60 4.15e-05 GGGAAAAATT CCAATTAG ATTTTGACAC chr3R:29774933-29775053 109 6.06e-05 GCTTCCGTTT CTAATTGG ATTC chrX:2354429-2354549 107 6.06e-05 TTTGAAGTTT CTAATTGG AATGTT chr3L:20918631-20918751 61 6.06e-05 AATTTTATTT CTAATTGG AATTCGTTTG chrX:15817025-15817145 105 6.06e-05 TCTAGTTTTT CTAATTGG AAATTATC chr3L:5878865-5878985 87 6.06e-05 GAATGACAGT CTAATTGG AGGATTTGGC chr3R:17795675-17795795 57 6.06e-05 CTGGCTGGGT CTAATTGG ACTAGCCATT chrX:19642885-19643005 45 6.06e-05 ATCTCTATTT CTAATTGG AATTAGGTTT chr3R:14026297-14026417 32 6.06e-05 AAAAGGATAT CTAATTGG ATTTCACTTG chr2L:447241-447361 19 6.06e-05 ACTCGACAAG CTAATTGG AAACCGGAAC chr2L:6820242-6820362 32 6.06e-05 AGACGCTTCT CTAATTGG AAGTAGAGCA chrX:15875672-15875792 42 6.06e-05 CCAATCGATT CTAATTGG AAAAACACTC chrX:22535906-22536026 70 6.06e-05 TTGTTTCGAT CTAATTGG GATATCCAAA chr3L:12749074-12749194 11 6.06e-05 ATTATGTTTT CTAATTGG AAACTAATGG chr2R:7939854-7939974 45 6.06e-05 TATTAGTTCC CTAATTGG GCTCTTAAGA chr3R:6707892-6708012 86 6.06e-05 TGTTGTAGTT CTAATTGG AATTTTAAGA chrX:9117970-9118090 5 6.06e-05 CAAT CTAATTGG GATAAAACAA chr3L:21878428-21878548 57 6.06e-05 CTACCGCGGT CTAATTGG AATCGGGCTG chrX:15449502-15449622 30 7.38e-05 CCGGGAAATC CCAATCAG AAACCAATTC chr2R:2589649-2589769 53 7.38e-05 catttccggc ccaatcag aataaacata chrX:12633349-12633469 58 7.38e-05 CGTTACATTT CCAATCAG CATAAATTGC chr2R:17815290-17815410 75 7.38e-05 TTTCCATTTC CCAATCAG AATCTTGAGA chr3L:18015308-18015428 65 7.38e-05 CAGAAACTTC CCAATCAG AATAGAACGG chr3L:3593661-3593781 7 7.38e-05 TGCATT CCAATCAG AGTCAACTTT chrX:12613334-12613454 29 7.38e-05 CTTGTTTCTT CCAATCAG AGAATTGTGG chr3L:3290930-3291050 17 7.38e-05 CCAAAAATTT CCAATCAG AACTGCTGCA chr3L:18105463-18105583 63 7.38e-05 AATTGCCATT CCAATCAG AGGTAAACAA chr3R:19902435-19902555 62 7.38e-05 GGGGTGGCCT CCAATCAG ATGCGTGTGA chrX:15566178-15566298 47 7.38e-05 TGTGGATTCT CCAATCAG ACAATGCTCA chr2L:5092746-5092866 19 7.38e-05 GGCTCGACCT CCAATCAG AATCAAGTTC chr3L:20715823-20715943 70 7.38e-05 GTCCATTAGT CCAATCAG TCACTCACGA chr3L:5998401-5998521 31 7.38e-05 AAGAAGGAAT CCAATCAG AACGCGTCCG chr2R:8066592-8066712 65 7.38e-05 TCGGCTAATC CCAATCAG AATCTGGCTC chr2L:15746121-15746241 105 7.38e-05 CCGTCTCTTG CCAATCAG AAAGCAAC chrX:16102958-16103078 71 7.38e-05 TGGAGAGACT CCAATCAG AGACCTTCCC chrX:6701094-6701214 42 9.64e-05 TGAACAAATT CCGATTGG AATCTCGATC chr3L:7364870-7364990 31 9.64e-05 AATAAGAGAT CCGATTGG GAATCTGAAG chr2R:25175653-25175773 41 9.64e-05 AAAGAAATTT CCGATTGG AGTAAAAATG chrX:6080659-6080779 1 1.24e-04 . CTAATTAG AATGCGGAAG chr3R:29043233-29043353 46 1.24e-04 GAATGCAGTA CTAATTAG ATTCTATTCC chr3L:11876202-11876322 15 1.24e-04 GTGGGCCACT CTAATTAG AATAATTTTG chr3R:14037483-14037603 22 1.24e-04 AATTATGGTG CTAATTAG CGCAGCACAT chr3L:22742473-22742593 100 1.24e-04 GGAGTCCGTT CTAATTAG ACATTCTTCC chr3L:11020206-11020326 56 1.24e-04 TCCAAGTGGT CTAATTAG CTCTTATCAG chr2R:17581863-17581983 73 1.24e-04 TCTTGTCAAA CTAATTAG AATTATACTA chr3L:3198536-3198656 1 1.89e-04 . CTAATCAG AATTTCCAGA chrX:13277284-13277404 113 1.89e-04 CAGTGTTGAT CTAATCAG chr2R:10669858-10669978 68 1.89e-04 AGTTTTTCTT CTAATCAG AAAAACATTT chrX:8100818-8100938 52 1.89e-04 TATTGGACAT CCAATAGG ACCGAAGGCC chr3L:21035394-21035514 22 1.89e-04 ATGGAAACTT CCAATAGG AAGAGATGCA chr2R:16572137-16572257 106 1.89e-04 CAATCTGCAT CTAATCAG AAATTTT chrX:15696974-15697094 20 1.89e-04 CAACCCTCTG CTAATCAG AATGTTAATT chrX:15840142-15840262 18 1.89e-04 CAATTCTCTG CTAATCAG AATGTTAATT chr3L:805337-805457 45 1.89e-04 TAGTTAGAAT CTAATCAG ATAAAATTAA chr2R:17849729-17849849 59 1.89e-04 GCTCAAAATT CTAATCAG AACTGCTTAT chr2R:6450280-6450400 62 2.12e-04 catgctgatt ctgattgg gcaggaaatg chr3R:9418508-9418628 68 2.12e-04 ACGCAAACGT CTGATTGG ATAAGGAAAA chr3R:24580079-24580199 44 2.12e-04 ATTAAAGAAA CTGATTGG AAGTTCCAGG chr3R:7549497-7549617 82 2.12e-04 TGTTAACATT CTGATTGG AAAACCAGAA chr3L:15008784-15008904 21 2.12e-04 TGACATTATT CTGATTGG GCCACAGATT chrX:3288566-3288686 94 2.12e-04 GAGCAGAGGG CTGATTGG AATGAAGAGC chrX:16648529-16648649 75 2.12e-04 TTAGCTGCTT CTGATTGG CATTTTCGTA chrX:13256546-13256666 70 2.12e-04 TATCCACTTA CCAGTTGG TCTTGTTGGG chrX:12658569-12658689 18 2.12e-04 GCAGAAGGCG CTGATTGG AAAACACCAA chrX:17108145-17108265 112 2.12e-04 ATGATTTCTT CTGATTGG A chrX:7606533-7606653 48 2.12e-04 CGTTTTTAAT CCAGTTGG AATTCTGCTG chrX:5537102-5537222 10 2.12e-04 TGCGGCCGG CTGATTGG ACTTGACTTC chrX:8525896-8526016 44 2.12e-04 GCGATggatt ctgattgg gattggtact chr2L:8683366-8683486 17 2.44e-04 CCATTTGATT CAAATTGG AATTAGCAAA chrX:17336576-17336696 81 2.44e-04 GATTGGTAAT CCAATTCG CAAGCCCACT chrX:12940535-12940655 69 2.44e-04 TAACGAAATT CAAATTGG AAACAAAAGT chr2L:8304761-8304881 88 2.44e-04 TACAGCTCTT CCAATTCG GATTATCCCA chrX:5697818-5697938 27 2.44e-04 gacagagatt caaattgg aattaaaaGC chr3L:16485311-16485431 57 2.44e-04 ttaacctttt ccaattcg atttcTAGCT chrX:9165021-9165141 65 2.58e-04 CCGTCGCAGT CGAATTGG AAGAAGGCAA chr3R:15367607-15367727 7 2.92e-04 CTCCAA CCAGTCGG GATATTTATT chr2L:2577227-2577347 111 2.92e-04 CAAATGCTCT CTGATCGG AA chr2R:17498848-17498968 55 2.92e-04 ggcatgggtc ctgatcgg tttgCTGGTC chr2R:9968579-9968699 15 3.52e-04 AATTCTAACT CCAATAAG GATGACTTAG chr3L:14950068-14950188 102 3.52e-04 AGAAGCGTTA CAAATCGG ATGCCATATG chrX:170760-170880 7 3.52e-04 AGTACT CCAATAAG AATTTCAGAT chr3R:11344099-11344219 111 3.52e-04 AGAAGACACA CCAATAAG GA chr3L:14618591-14618711 82 3.52e-04 CTAAAAAAGA CCAATAAG AAAAATAAAT chr3R:8464007-8464127 87 3.52e-04 GCTTAGAGCC CCAATAAG AATCAACACA chr3L:7714158-7714278 25 3.52e-04 CGCGTCCACT CCAATAAG AATTCTACCC chr3L:15276347-15276467 92 3.52e-04 TTCATAAGAT CCAATAAG ATCTAAGGTG chr2R:11747571-11747691 72 3.52e-04 CATTCATTGC CCAATCCG AACTCGAAGT chr3R:13842671-13842791 44 3.52e-04 TGCATCGATT CCAATCCG AAAACAGCAT chr3R:22396842-22396962 38 4.32e-04 GCCACCTCGT CTTATTGG AATTCGCTGT chr2R:9231469-9231589 61 4.32e-04 CAAAAGCAGT CCAGTTAG AGTTAAAGAC chr3R:26040992-26041112 107 4.32e-04 AATTGGAATC CTTATTGG TAATTA chr2R:12885214-12885334 67 4.32e-04 CACTGAACAT CTTATTGG ATTACACTAA chrX:12632122-12632242 83 4.32e-04 CAACAAGTTT CTTATTGG ACTACATTTA chr3R:9710341-9710461 56 4.32e-04 GCGCTAGTTT CTTATTGG GATTCGCCCC chr2R:24347106-24347226 47 4.32e-04 aatgcgattt cgaatcgg aatcagaacg chr2R:5885083-5885203 70 4.32e-04 CTCGCTTGTT CCAGTTAG AATGAGTGTT chr2R:23204699-23204819 59 4.32e-04 CTTCAATTTT CTTATTGG AACTGACCTA chr2R:16586842-16586962 61 4.32e-04 ACAGCGCATT CTTATTGG ATTTTTAGAT chr2R:10675006-10675126 51 4.74e-04 TTATGATTTT CTAGTTGG AATGCGGTGT chrX:18611848-18611968 68 4.74e-04 ggttgaagat ctagttgg agttctgctt chr2R:24291079-24291199 36 5.12e-04 TTTCCAAATT CGAATTAG AAAATAACAT chrX:7252627-7252747 58 5.79e-04 GCTAGAAATT CTGATCAG ATCGGGGAGT chrX:19191165-19191285 18 5.79e-04 AAAATATCAT CCACTTGG TATGACTTGA chrX:8721599-8721719 30 5.79e-04 ttcgaatgtt ctgatcag aataTTTATA chr2R:24345042-24345162 57 5.79e-04 ATTATTAGTT CCACTTGG AAGTATGTTT chr3R:30000377-30000497 59 6.14e-04 AATTTAAATT CAAATCAG CGATATTGCC chr2R:25076236-25076356 39 6.14e-04 GGGTCAGGAT CAAATCAG AAACCAAATA chrX:10931395-10931515 50 6.14e-04 TCTCGGAATT CAAATCAG AATCTGAATC chr3L:2864560-2864680 81 7.18e-04 gattcctatt ccgattcg gattcctatt chr3L:3782742-3782862 32 7.18e-04 TGAAGGAAAT CTTATTAG AATGCATATT chr3L:15172970-15173090 14 7.18e-04 cataggaatc cgaatcag aatcGGTGAG chr3L:21706658-21706778 111 7.18e-04 AGCTTCCGTG CTAATCCG CT chr2L:9121051-9121171 104 7.18e-04 CAATCGAATT CTAATAAG ATTATGAGT chr3R:5995486-5995606 107 7.18e-04 ttagtagaat cttattag aatctt chr3L:4133307-4133427 51 7.18e-04 AGAAGATTTT CTTATTAG AAAAACAGCT chr2R:16187016-16187136 43 7.18e-04 aatccgaatt cgaatcag cagaattcga chrX:16104173-16104293 76 7.47e-04 AGTGTGAGTT CGGATTGG AGTTCATTCA chr2L:10648072-10648192 55 7.69e-04 GATCACAGTC CCAATTGC AGTCACAGTT chr3R:23733661-23733781 53 7.69e-04 AACGACCGCT CCAACTGG AAACCGCACT chr2L:10647873-10647993 8 7.69e-04 CACAATC CCAATTGC AATCACAGAT chr3R:29143595-29143715 71 7.69e-04 AAGCAGTGTT CCAACTGG ATGCCCTTTC chr2L:8300346-8300466 2 8.67e-04 T CTTATCAG AATACAATAG chr2L:12201097-12201217 11 8.67e-04 TGCATTGATT GCAATTGG ATTTTACTTG chr3L:6653196-6653316 45 8.67e-04 TGTGTCGGAT GCAATTGG GACGTAATTG chrX:3186643-3186763 75 8.67e-04 GGTTGGTATT CTTATCAG AATGTGCAGA chr2R:23204898-23205018 21 1.05e-03 ATTATTTCTG CATATTGG TGCTGCGAAA chrX:6540081-6540201 5 1.05e-03 AATC CATATTGG ATTGCCATGG chr2R:12965753-12965873 66 1.05e-03 TGGGAATTGG CAGATTAG AAACGCTCGA chr2L:1979542-1979662 113 1.05e-03 TTTTAGCATT CTGGTTGG chr2L:9454822-9454942 63 1.13e-03 TGGAAATGCT CGTATTGG AGTTTGTTTT chr3R:20543651-20543771 90 1.13e-03 TAAACTCAGT CAAGTTGG CAAAAATAGT chr3L:5879065-5879185 57 1.13e-03 TACTCCAGTT CCAGTTCG AGATTCGGAT chrX:16101699-16101819 2 1.19e-03 T CAAATTCG CAGAAGTGCG chr3R:13422317-13422437 42 1.19e-03 ACAGGATTTT CCAATTAC ATTAAGGCAG chrX:836079-836199 29 1.25e-03 CGGTCCAGTT CCACTCAG TTATTCTTAT chrX:16648245-16648365 13 1.28e-03 ATTGGACACT CCGGTCAG TGTTGCGAAA chr3L:22792142-22792262 32 1.36e-03 GTTCGTTCTT CAGATCAG Aatctgatct chr3L:12399572-12399692 55 1.51e-03 ATGTGGTTCC CGTATCGG ACAAACACTT chr2R:17394106-17394226 74 1.51e-03 TTGGACACTG CTGATAAG AGGACACAAT chr2R:13448666-13448786 69 1.51e-03 AAACTGCAGT CTGATAAG ACGACTTGTG chr2R:19422386-19422506 81 1.51e-03 CGCGAAGGTT CTGATAAG ATTGCGGGAG chr3R:19939327-19939447 77 1.79e-03 GCAATAAGAT CAAGTTAG TGGCAGATTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:15246762-15246882 1.3e-05 26_[+1]_86 chr2R:12886924-12887044 1.3e-05 37_[+1]_75 chrX:11156128-11156248 1.3e-05 56_[+1]_56 chrX:6701293-6701413 1.3e-05 26_[+1]_86 chr4:570522-570642 1.3e-05 26_[+1]_86 chr3R:17938520-17938640 1.3e-05 27_[+1]_85 chr2L:3422933-3423053 1.3e-05 62_[+1]_50 chr2L:8297165-8297285 1.3e-05 17_[+1]_95 chr2L:6076256-6076376 1.3e-05 44_[+1]_68 chrX:7197174-7197294 1.3e-05 16_[+1]_96 chr3R:11345062-11345182 1.3e-05 55_[+1]_57 chr3R:9880252-9880372 1.3e-05 83_[+1]_29 chrX:9110270-9110390 1.3e-05 45_[+1]_67 chrX:21056868-21056988 1.3e-05 31_[+1]_81 chrX:6678823-6678943 1.3e-05 97_[+1]_15 chr3L:171741-171861 1.3e-05 32_[+1]_80 chrX:8908316-8908436 1.3e-05 90_[+1]_22 chr2L:20310705-20310825 1.3e-05 47_[+1]_65 chr3R:16898514-16898634 1.3e-05 63_[+1]_49 chr3L:11126238-11126358 1.3e-05 56_[+1]_56 chrX:7196973-7197093 1.3e-05 90_[+1]_22 chr3R:23889257-23889377 1.3e-05 48_[+1]_64 chrX:6255079-6255199 1.3e-05 32_[+1]_80 chr2R:20029353-20029473 1.3e-05 71_[+1]_41 chrX:9634382-9634502 1.3e-05 67_[+1]_45 chr2L:12603496-12603616 1.3e-05 43_[+1]_69 chrX:9282137-9282257 1.3e-05 59_[+1]_53 chr2R:1340044-1340164 1.3e-05 59_[+1]_53 chr2L:11955972-11956092 1.3e-05 94_[+1]_18 chr3R:13981084-13981204 1.3e-05 27_[+1]_85 chrX:10324101-10324221 1.3e-05 59_[+1]_53 chr2R:23236970-23237090 1.3e-05 28_[+1]_84 chrX:9121594-9121714 1.3e-05 57_[+1]_55 chr3R:24945561-24945681 1.3e-05 108_[+1]_4 chr3R:18156728-18156848 1.3e-05 17_[+1]_95 chr2L:15306937-15307057 1.3e-05 41_[+1]_71 chr3R:13056692-13056812 1.3e-05 69_[+1]_43 chrX:13104678-13104798 1.3e-05 66_[+1]_46 chr3L:2586943-2587063 1.3e-05 98_[+1]_14 chr2L:10291418-10291538 1.3e-05 32_[+1]_80 chr3L:20603896-20604016 1.3e-05 93_[+1]_19 chr2L:20429563-20429683 1.3e-05 47_[+1]_65 chrX:3187732-3187852 1.3e-05 60_[+1]_52 chr2R:19481265-19481385 2.2e-05 30_[+1]_82 chr2R:12343834-12343954 2.2e-05 8_[+1]_104 chrX:2221709-2221829 2.2e-05 7_[+1]_105 chr2L:5366932-5367052 2.2e-05 81_[+1]_31 chrX:10386356-10386476 2.2e-05 81_[+1]_31 chrX:8114979-8115099 2.2e-05 85_[+1]_27 chrX:1775366-1775486 2.2e-05 64_[+1]_48 chr3L:19908220-19908340 4.2e-05 52_[+1]_60 chr3R:30467200-30467320 4.2e-05 102_[+1]_10 chr2L:5270666-5270786 4.2e-05 112_[+1] chr2L:18598257-18598377 4.2e-05 45_[+1]_67 chrX:7522066-7522186 4.2e-05 75_[+1]_37 chr3R:9379525-9379645 4.2e-05 55_[+1]_57 chrX:3578988-3579108 4.2e-05 44_[+1]_68 chr3R:32050810-32050930 4.2e-05 39_[+1]_73 chrX:4199021-4199141 4.2e-05 59_[+1]_53 chr3L:416494-416614 4.2e-05 84_[+1]_28 chrX:6802514-6802634 4.2e-05 45_[+1]_67 chr3L:8066851-8066971 4.2e-05 59_[+1]_53 chr3R:29774933-29775053 6.1e-05 108_[+1]_4 chrX:2354429-2354549 6.1e-05 106_[+1]_6 chr3L:20918631-20918751 6.1e-05 60_[+1]_52 chrX:15817025-15817145 6.1e-05 104_[+1]_8 chr3L:5878865-5878985 6.1e-05 86_[+1]_26 chr3R:17795675-17795795 6.1e-05 56_[+1]_56 chrX:19642885-19643005 6.1e-05 44_[+1]_68 chr3R:14026297-14026417 6.1e-05 31_[+1]_81 chr2L:447241-447361 6.1e-05 18_[+1]_94 chr2L:6820242-6820362 6.1e-05 31_[+1]_81 chrX:15875672-15875792 6.1e-05 41_[+1]_71 chrX:22535906-22536026 6.1e-05 69_[+1]_43 chr3L:12749074-12749194 6.1e-05 10_[+1]_102 chr2R:7939854-7939974 6.1e-05 44_[+1]_68 chr3R:6707892-6708012 6.1e-05 85_[+1]_27 chrX:9117970-9118090 6.1e-05 4_[+1]_108 chr3L:21878428-21878548 6.1e-05 56_[+1]_56 chrX:15449502-15449622 7.4e-05 29_[+1]_83 chr2R:2589649-2589769 7.4e-05 52_[+1]_60 chrX:12633349-12633469 7.4e-05 57_[+1]_55 chr2R:17815290-17815410 7.4e-05 74_[+1]_38 chr3L:18015308-18015428 7.4e-05 64_[+1]_48 chr3L:3593661-3593781 7.4e-05 6_[+1]_106 chrX:12613334-12613454 7.4e-05 28_[+1]_84 chr3L:3290930-3291050 7.4e-05 16_[+1]_96 chr3L:18105463-18105583 7.4e-05 62_[+1]_50 chr3R:19902435-19902555 7.4e-05 61_[+1]_51 chrX:15566178-15566298 7.4e-05 46_[+1]_66 chr2L:5092746-5092866 7.4e-05 18_[+1]_94 chr3L:20715823-20715943 7.4e-05 69_[+1]_43 chr3L:5998401-5998521 7.4e-05 30_[+1]_82 chr2R:8066592-8066712 7.4e-05 64_[+1]_48 chr2L:15746121-15746241 7.4e-05 104_[+1]_8 chrX:16102958-16103078 7.4e-05 70_[+1]_42 chrX:6701094-6701214 9.6e-05 41_[+1]_71 chr3L:7364870-7364990 9.6e-05 30_[+1]_82 chr2R:25175653-25175773 9.6e-05 40_[+1]_72 chrX:6080659-6080779 0.00012 [+1]_112 chr3R:29043233-29043353 0.00012 45_[+1]_67 chr3L:11876202-11876322 0.00012 14_[+1]_98 chr3R:14037483-14037603 0.00012 21_[+1]_91 chr3L:22742473-22742593 0.00012 99_[+1]_13 chr3L:11020206-11020326 0.00012 55_[+1]_57 chr2R:17581863-17581983 0.00012 72_[+1]_40 chr3L:3198536-3198656 0.00019 [+1]_112 chrX:13277284-13277404 0.00019 112_[+1] chr2R:10669858-10669978 0.00019 67_[+1]_45 chrX:8100818-8100938 0.00019 51_[+1]_61 chr3L:21035394-21035514 0.00019 21_[+1]_91 chr2R:16572137-16572257 0.00019 105_[+1]_7 chrX:15696974-15697094 0.00019 19_[+1]_93 chrX:15840142-15840262 0.00019 17_[+1]_95 chr3L:805337-805457 0.00019 44_[+1]_68 chr2R:17849729-17849849 0.00019 58_[+1]_54 chr2R:6450280-6450400 0.00021 61_[+1]_51 chr3R:9418508-9418628 0.00021 67_[+1]_45 chr3R:24580079-24580199 0.00021 43_[+1]_69 chr3R:7549497-7549617 0.00021 81_[+1]_31 chr3L:15008784-15008904 0.00021 20_[+1]_92 chrX:3288566-3288686 0.00021 93_[+1]_19 chrX:16648529-16648649 0.00021 74_[+1]_38 chrX:13256546-13256666 0.00021 69_[+1]_43 chrX:12658569-12658689 0.00021 17_[+1]_95 chrX:17108145-17108265 0.00021 111_[+1]_1 chrX:7606533-7606653 0.00021 47_[+1]_65 chrX:5537102-5537222 0.00021 9_[+1]_103 chrX:8525896-8526016 0.00021 43_[+1]_69 chr2L:8683366-8683486 0.00024 16_[+1]_96 chrX:17336576-17336696 0.00024 80_[+1]_32 chrX:12940535-12940655 0.00024 68_[+1]_44 chr2L:8304761-8304881 0.00024 87_[+1]_25 chrX:5697818-5697938 0.00024 26_[+1]_86 chr3L:16485311-16485431 0.00024 56_[+1]_56 chrX:9165021-9165141 0.00026 64_[+1]_48 chr3R:15367607-15367727 0.00029 6_[+1]_106 chr2L:2577227-2577347 0.00029 110_[+1]_2 chr2R:17498848-17498968 0.00029 54_[+1]_58 chr2R:9968579-9968699 0.00035 14_[+1]_98 chr3L:14950068-14950188 0.00035 101_[+1]_11 chrX:170760-170880 0.00035 6_[+1]_106 chr3R:11344099-11344219 0.00035 110_[+1]_2 chr3L:14618591-14618711 0.00035 81_[+1]_31 chr3R:8464007-8464127 0.00035 86_[+1]_26 chr3L:7714158-7714278 0.00035 24_[+1]_88 chr3L:15276347-15276467 0.00035 91_[+1]_21 chr2R:11747571-11747691 0.00035 71_[+1]_41 chr3R:13842671-13842791 0.00035 43_[+1]_69 chr3R:22396842-22396962 0.00043 37_[+1]_75 chr2R:9231469-9231589 0.00043 60_[+1]_52 chr3R:26040992-26041112 0.00043 106_[+1]_6 chr2R:12885214-12885334 0.00043 66_[+1]_46 chrX:12632122-12632242 0.00043 82_[+1]_30 chr3R:9710341-9710461 0.00043 55_[+1]_57 chr2R:24347106-24347226 0.00043 46_[+1]_66 chr2R:5885083-5885203 0.00043 69_[+1]_43 chr2R:23204699-23204819 0.00043 58_[+1]_54 chr2R:16586842-16586962 0.00043 60_[+1]_52 chr2R:10675006-10675126 0.00047 50_[+1]_62 chrX:18611848-18611968 0.00047 67_[+1]_45 chr2R:24291079-24291199 0.00051 35_[+1]_77 chrX:7252627-7252747 0.00058 57_[+1]_55 chrX:19191165-19191285 0.00058 17_[+1]_95 chrX:8721599-8721719 0.00058 29_[+1]_83 chr2R:24345042-24345162 0.00058 56_[+1]_56 chr3R:30000377-30000497 0.00061 58_[+1]_54 chr2R:25076236-25076356 0.00061 38_[+1]_74 chrX:10931395-10931515 0.00061 49_[+1]_63 chr3L:2864560-2864680 0.00072 80_[+1]_32 chr3L:3782742-3782862 0.00072 31_[+1]_81 chr3L:15172970-15173090 0.00072 13_[+1]_99 chr3L:21706658-21706778 0.00072 110_[+1]_2 chr2L:9121051-9121171 0.00072 103_[+1]_9 chr3R:5995486-5995606 0.00072 106_[+1]_6 chr3L:4133307-4133427 0.00072 50_[+1]_62 chr2R:16187016-16187136 0.00072 42_[+1]_70 chrX:16104173-16104293 0.00075 75_[+1]_37 chr2L:10648072-10648192 0.00077 54_[+1]_58 chr3R:23733661-23733781 0.00077 52_[+1]_60 chr2L:10647873-10647993 0.00077 7_[+1]_105 chr3R:29143595-29143715 0.00077 70_[+1]_42 chr2L:8300346-8300466 0.00087 1_[+1]_111 chr2L:12201097-12201217 0.00087 10_[+1]_102 chr3L:6653196-6653316 0.00087 44_[+1]_68 chrX:3186643-3186763 0.00087 74_[+1]_38 chr2R:23204898-23205018 0.0011 20_[+1]_92 chrX:6540081-6540201 0.0011 4_[+1]_108 chr2R:12965753-12965873 0.0011 65_[+1]_47 chr2L:1979542-1979662 0.0011 112_[+1] chr2L:9454822-9454942 0.0011 62_[+1]_50 chr3R:20543651-20543771 0.0011 89_[+1]_23 chr3L:5879065-5879185 0.0011 56_[+1]_56 chrX:16101699-16101819 0.0012 1_[+1]_111 chr3R:13422317-13422437 0.0012 41_[+1]_71 chrX:836079-836199 0.0013 28_[+1]_84 chrX:16648245-16648365 0.0013 12_[+1]_100 chr3L:22792142-22792262 0.0014 31_[+1]_81 chr3L:12399572-12399692 0.0015 54_[+1]_58 chr2R:17394106-17394226 0.0015 73_[+1]_39 chr2R:13448666-13448786 0.0015 68_[+1]_44 chr2R:19422386-19422506 0.0015 80_[+1]_32 chr3R:19939327-19939447 0.0018 76_[+1]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYAATTRG width=8 seqs=203 chr3R:15246762-15246882 ( 27) CCAATTGG 1 chr2R:12886924-12887044 ( 38) CCAATTGG 1 chrX:11156128-11156248 ( 57) CCAATTGG 1 chrX:6701293-6701413 ( 27) CCAATTGG 1 chr4:570522-570642 ( 27) CCAATTGG 1 chr3R:17938520-17938640 ( 28) CCAATTGG 1 chr2L:3422933-3423053 ( 63) CCAATTGG 1 chr2L:8297165-8297285 ( 18) CCAATTGG 1 chr2L:6076256-6076376 ( 45) CCAATTGG 1 chrX:7197174-7197294 ( 17) CCAATTGG 1 chr3R:11345062-11345182 ( 56) CCAATTGG 1 chr3R:9880252-9880372 ( 84) CCAATTGG 1 chrX:9110270-9110390 ( 46) CCAATTGG 1 chrX:21056868-21056988 ( 32) CCAATTGG 1 chrX:6678823-6678943 ( 98) CCAATTGG 1 chr3L:171741-171861 ( 33) CCAATTGG 1 chrX:8908316-8908436 ( 91) CCAATTGG 1 chr2L:20310705-20310825 ( 48) CCAATTGG 1 chr3R:16898514-16898634 ( 64) CCAATTGG 1 chr3L:11126238-11126358 ( 57) CCAATTGG 1 chrX:7196973-7197093 ( 91) CCAATTGG 1 chr3R:23889257-23889377 ( 49) CCAATTGG 1 chrX:6255079-6255199 ( 33) CCAATTGG 1 chr2R:20029353-20029473 ( 72) CCAATTGG 1 chrX:9634382-9634502 ( 68) CCAATTGG 1 chr2L:12603496-12603616 ( 44) CCAATTGG 1 chrX:9282137-9282257 ( 60) CCAATTGG 1 chr2R:1340044-1340164 ( 60) CCAATTGG 1 chr2L:11955972-11956092 ( 95) CCAATTGG 1 chr3R:13981084-13981204 ( 28) CCAATTGG 1 chrX:10324101-10324221 ( 60) CCAATTGG 1 chr2R:23236970-23237090 ( 29) CCAATTGG 1 chrX:9121594-9121714 ( 58) CCAATTGG 1 chr3R:24945561-24945681 ( 109) CCAATTGG 1 chr3R:18156728-18156848 ( 18) CCAATTGG 1 chr2L:15306937-15307057 ( 42) CCAATTGG 1 chr3R:13056692-13056812 ( 70) CCAATTGG 1 chrX:13104678-13104798 ( 67) CCAATTGG 1 chr3L:2586943-2587063 ( 99) CCAATTGG 1 chr2L:10291418-10291538 ( 33) CCAATTGG 1 chr3L:20603896-20604016 ( 94) CCAATTGG 1 chr2L:20429563-20429683 ( 48) CCAATTGG 1 chrX:3187732-3187852 ( 61) CCAATTGG 1 chr2R:19481265-19481385 ( 31) CCAATCGG 1 chr2R:12343834-12343954 ( 9) CCAATCGG 1 chrX:2221709-2221829 ( 8) CCAATCGG 1 chr2L:5366932-5367052 ( 82) CCAATCGG 1 chrX:10386356-10386476 ( 82) CCAATCGG 1 chrX:8114979-8115099 ( 86) CCAATCGG 1 chrX:1775366-1775486 ( 65) CCAATCGG 1 chr3L:19908220-19908340 ( 53) CCAATTAG 1 chr3R:30467200-30467320 ( 103) CCAATTAG 1 chr2L:5270666-5270786 ( 113) CCAATTAG 1 chr2L:18598257-18598377 ( 46) CCAATTAG 1 chrX:7522066-7522186 ( 76) CCAATTAG 1 chr3R:9379525-9379645 ( 56) CCAATTAG 1 chrX:3578988-3579108 ( 45) CCAATTAG 1 chr3R:32050810-32050930 ( 40) CCAATTAG 1 chrX:4199021-4199141 ( 60) CCAATTAG 1 chr3L:416494-416614 ( 85) CCAATTAG 1 chrX:6802514-6802634 ( 46) CCAATTAG 1 chr3L:8066851-8066971 ( 60) CCAATTAG 1 chr3R:29774933-29775053 ( 109) CTAATTGG 1 chrX:2354429-2354549 ( 107) CTAATTGG 1 chr3L:20918631-20918751 ( 61) CTAATTGG 1 chrX:15817025-15817145 ( 105) CTAATTGG 1 chr3L:5878865-5878985 ( 87) CTAATTGG 1 chr3R:17795675-17795795 ( 57) CTAATTGG 1 chrX:19642885-19643005 ( 45) CTAATTGG 1 chr3R:14026297-14026417 ( 32) CTAATTGG 1 chr2L:447241-447361 ( 19) CTAATTGG 1 chr2L:6820242-6820362 ( 32) CTAATTGG 1 chrX:15875672-15875792 ( 42) CTAATTGG 1 chrX:22535906-22536026 ( 70) CTAATTGG 1 chr3L:12749074-12749194 ( 11) CTAATTGG 1 chr2R:7939854-7939974 ( 45) CTAATTGG 1 chr3R:6707892-6708012 ( 86) CTAATTGG 1 chrX:9117970-9118090 ( 5) CTAATTGG 1 chr3L:21878428-21878548 ( 57) CTAATTGG 1 chrX:15449502-15449622 ( 30) CCAATCAG 1 chr2R:2589649-2589769 ( 53) CCAATCAG 1 chrX:12633349-12633469 ( 58) CCAATCAG 1 chr2R:17815290-17815410 ( 75) CCAATCAG 1 chr3L:18015308-18015428 ( 65) CCAATCAG 1 chr3L:3593661-3593781 ( 7) CCAATCAG 1 chrX:12613334-12613454 ( 29) CCAATCAG 1 chr3L:3290930-3291050 ( 17) CCAATCAG 1 chr3L:18105463-18105583 ( 63) CCAATCAG 1 chr3R:19902435-19902555 ( 62) CCAATCAG 1 chrX:15566178-15566298 ( 47) CCAATCAG 1 chr2L:5092746-5092866 ( 19) CCAATCAG 1 chr3L:20715823-20715943 ( 70) CCAATCAG 1 chr3L:5998401-5998521 ( 31) CCAATCAG 1 chr2R:8066592-8066712 ( 65) CCAATCAG 1 chr2L:15746121-15746241 ( 105) CCAATCAG 1 chrX:16102958-16103078 ( 71) CCAATCAG 1 chrX:6701094-6701214 ( 42) CCGATTGG 1 chr3L:7364870-7364990 ( 31) CCGATTGG 1 chr2R:25175653-25175773 ( 41) CCGATTGG 1 chrX:6080659-6080779 ( 1) CTAATTAG 1 chr3R:29043233-29043353 ( 46) CTAATTAG 1 chr3L:11876202-11876322 ( 15) CTAATTAG 1 chr3R:14037483-14037603 ( 22) CTAATTAG 1 chr3L:22742473-22742593 ( 100) CTAATTAG 1 chr3L:11020206-11020326 ( 56) CTAATTAG 1 chr2R:17581863-17581983 ( 73) CTAATTAG 1 chr3L:3198536-3198656 ( 1) CTAATCAG 1 chrX:13277284-13277404 ( 113) CTAATCAG 1 chr2R:10669858-10669978 ( 68) CTAATCAG 1 chrX:8100818-8100938 ( 52) CCAATAGG 1 chr3L:21035394-21035514 ( 22) CCAATAGG 1 chr2R:16572137-16572257 ( 106) CTAATCAG 1 chrX:15696974-15697094 ( 20) CTAATCAG 1 chrX:15840142-15840262 ( 18) CTAATCAG 1 chr3L:805337-805457 ( 45) CTAATCAG 1 chr2R:17849729-17849849 ( 59) CTAATCAG 1 chr2R:6450280-6450400 ( 62) CTGATTGG 1 chr3R:9418508-9418628 ( 68) CTGATTGG 1 chr3R:24580079-24580199 ( 44) CTGATTGG 1 chr3R:7549497-7549617 ( 82) CTGATTGG 1 chr3L:15008784-15008904 ( 21) CTGATTGG 1 chrX:3288566-3288686 ( 94) CTGATTGG 1 chrX:16648529-16648649 ( 75) CTGATTGG 1 chrX:13256546-13256666 ( 70) CCAGTTGG 1 chrX:12658569-12658689 ( 18) CTGATTGG 1 chrX:17108145-17108265 ( 112) CTGATTGG 1 chrX:7606533-7606653 ( 48) CCAGTTGG 1 chrX:5537102-5537222 ( 10) CTGATTGG 1 chrX:8525896-8526016 ( 44) CTGATTGG 1 chr2L:8683366-8683486 ( 17) CAAATTGG 1 chrX:17336576-17336696 ( 81) CCAATTCG 1 chrX:12940535-12940655 ( 69) CAAATTGG 1 chr2L:8304761-8304881 ( 88) CCAATTCG 1 chrX:5697818-5697938 ( 27) CAAATTGG 1 chr3L:16485311-16485431 ( 57) CCAATTCG 1 chrX:9165021-9165141 ( 65) CGAATTGG 1 chr3R:15367607-15367727 ( 7) CCAGTCGG 1 chr2L:2577227-2577347 ( 111) CTGATCGG 1 chr2R:17498848-17498968 ( 55) CTGATCGG 1 chr2R:9968579-9968699 ( 15) CCAATAAG 1 chr3L:14950068-14950188 ( 102) CAAATCGG 1 chrX:170760-170880 ( 7) CCAATAAG 1 chr3R:11344099-11344219 ( 111) CCAATAAG 1 chr3L:14618591-14618711 ( 82) CCAATAAG 1 chr3R:8464007-8464127 ( 87) CCAATAAG 1 chr3L:7714158-7714278 ( 25) CCAATAAG 1 chr3L:15276347-15276467 ( 92) CCAATAAG 1 chr2R:11747571-11747691 ( 72) CCAATCCG 1 chr3R:13842671-13842791 ( 44) CCAATCCG 1 chr3R:22396842-22396962 ( 38) CTTATTGG 1 chr2R:9231469-9231589 ( 61) CCAGTTAG 1 chr3R:26040992-26041112 ( 107) CTTATTGG 1 chr2R:12885214-12885334 ( 67) CTTATTGG 1 chrX:12632122-12632242 ( 83) CTTATTGG 1 chr3R:9710341-9710461 ( 56) CTTATTGG 1 chr2R:24347106-24347226 ( 47) CGAATCGG 1 chr2R:5885083-5885203 ( 70) CCAGTTAG 1 chr2R:23204699-23204819 ( 59) CTTATTGG 1 chr2R:16586842-16586962 ( 61) CTTATTGG 1 chr2R:10675006-10675126 ( 51) CTAGTTGG 1 chrX:18611848-18611968 ( 68) CTAGTTGG 1 chr2R:24291079-24291199 ( 36) CGAATTAG 1 chrX:7252627-7252747 ( 58) CTGATCAG 1 chrX:19191165-19191285 ( 18) CCACTTGG 1 chrX:8721599-8721719 ( 30) CTGATCAG 1 chr2R:24345042-24345162 ( 57) CCACTTGG 1 chr3R:30000377-30000497 ( 59) CAAATCAG 1 chr2R:25076236-25076356 ( 39) CAAATCAG 1 chrX:10931395-10931515 ( 50) CAAATCAG 1 chr3L:2864560-2864680 ( 81) CCGATTCG 1 chr3L:3782742-3782862 ( 32) CTTATTAG 1 chr3L:15172970-15173090 ( 14) CGAATCAG 1 chr3L:21706658-21706778 ( 111) CTAATCCG 1 chr2L:9121051-9121171 ( 104) CTAATAAG 1 chr3R:5995486-5995606 ( 107) CTTATTAG 1 chr3L:4133307-4133427 ( 51) CTTATTAG 1 chr2R:16187016-16187136 ( 43) CGAATCAG 1 chrX:16104173-16104293 ( 76) CGGATTGG 1 chr2L:10648072-10648192 ( 55) CCAATTGC 1 chr3R:23733661-23733781 ( 53) CCAACTGG 1 chr2L:10647873-10647993 ( 8) CCAATTGC 1 chr3R:29143595-29143715 ( 71) CCAACTGG 1 chr2L:8300346-8300466 ( 2) CTTATCAG 1 chr2L:12201097-12201217 ( 11) GCAATTGG 1 chr3L:6653196-6653316 ( 45) GCAATTGG 1 chrX:3186643-3186763 ( 75) CTTATCAG 1 chr2R:23204898-23205018 ( 21) CATATTGG 1 chrX:6540081-6540201 ( 5) CATATTGG 1 chr2R:12965753-12965873 ( 66) CAGATTAG 1 chr2L:1979542-1979662 ( 113) CTGGTTGG 1 chr2L:9454822-9454942 ( 63) CGTATTGG 1 chr3R:20543651-20543771 ( 90) CAAGTTGG 1 chr3L:5879065-5879185 ( 57) CCAGTTCG 1 chrX:16101699-16101819 ( 2) CAAATTCG 1 chr3R:13422317-13422437 ( 42) CCAATTAC 1 chrX:836079-836199 ( 29) CCACTCAG 1 chrX:16648245-16648365 ( 13) CCGGTCAG 1 chr3L:22792142-22792262 ( 32) CAGATCAG 1 chr3L:12399572-12399692 ( 55) CGTATCGG 1 chr2R:17394106-17394226 ( 74) CTGATAAG 1 chr2R:13448666-13448786 ( 69) CTGATAAG 1 chr2R:19422386-19422506 ( 81) CTGATAAG 1 chr3R:19939327-19939447 ( 77) CAAGTTAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.26085 E= 1.7e-154 -1431 229 -440 -1431 -211 147 -240 18 140 -1431 -65 -188 163 -377 -182 -1431 -1431 -436 -1431 177 -222 37 -1431 121 33 -219 148 -1431 -1431 -377 224 -1431 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 203 E= 1.7e-154 0.000000 0.990148 0.009852 0.000000 0.068966 0.561576 0.039409 0.330049 0.788177 0.000000 0.133005 0.078818 0.926108 0.014778 0.059113 0.000000 0.000000 0.009852 0.000000 0.990148 0.064039 0.261084 0.000000 0.674877 0.374384 0.044335 0.581281 0.000000 0.000000 0.014778 0.985222 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYAATTRG MEME-1 regular expression -------------------------------------------------------------------------------- C[CT]AAT[TC][GA]G -------------------------------------------------------------------------------- Time 8.30 secs. ******************************************************************************** ******************************************************************************** MOTIF CCAATMAG MEME-2 width = 8 sites = 22 llr = 209 E-value = 7.3e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::aa:5a: pos.-specific C aa::23:: probability G :::::::a matrix T ::::82:: bits 2.3 ** * 2.1 ** * 1.8 **** ** 1.6 **** ** Relative 1.4 **** ** Entropy 1.2 ***** ** (13.7 bits) 0.9 ***** ** 0.7 ***** ** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCAATAAG consensus CC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:29774933-29775053 61 1.95e-05 TGCACTGTGG CCAATAAG CCAAGAAACC chrX:11156128-11156248 42 1.95e-05 GGGCCGTCCG CCAATAAG ACCGATTCCA chrX:13277284-13277404 3 1.95e-05 CG CCAATAAG AATGCAGAGA chr3R:11344099-11344219 56 1.95e-05 CCAACCCGTT CCAATAAG AAAAAGTTTC chr2R:23236970-23237090 1 1.95e-05 . CCAATAAG AATTAAAGCG chrX:8114979-8115099 33 1.95e-05 CGCTGACGTT CCAATAAG AATGTGCGGC chr2L:5092746-5092866 60 1.95e-05 CATTAAGAGT CCAATAAG TAAGTGCATT chr3L:7364870-7364990 19 1.95e-05 CGCTCGCTGT CCAATAAG AGATCCGATT chr3L:20603896-20604016 49 1.95e-05 GAGCGTCCGT CCAATAAG CAAATCCCCG chr3L:3290930-3291050 83 3.27e-05 TTGGGTTCCC CCAATCAG AATGCGGTCA chrX:10324101-10324221 18 3.27e-05 CAGGACGAGT CCAATCAG ACATTTTTCG chr3L:20715823-20715943 53 3.27e-05 GATGTGAATT CCAATCAG TCCATTAGTC chr3L:21878428-21878548 27 3.27e-05 ATTGCGGAAT CCAATCAG AAATGCAAAC chrX:8908316-8908436 17 4.62e-05 TGAGTCACAT CCAACAAG TGCGACAGAG chrX:12632122-12632242 72 4.62e-05 tgttctCTTG CCAACAAG TTTCTTATTG chr2L:11955972-11956092 42 4.62e-05 CACGCACACT CCAACAAG AAACAGAAAC chrX:21056868-21056988 72 6.52e-05 GGGCCAAACA CCAATTAG AATCGGGCGA chrX:9634382-9634502 57 6.52e-05 GTTCCCACAT CCAATTAG AATCCAATTG chr2R:1340044-1340164 102 6.52e-05 ACTACCGAAT CCAATTAG AACGACATTG chr3R:18156728-18156848 5 6.52e-05 ATTA CCAATTAG ATTTTCCAAT chr3L:15008784-15008904 64 7.44e-05 TCTGCATATC CCAACCAG ATGAATATGA chr3L:18105463-18105583 41 7.44e-05 TATTTACAGT CCAACCAG TGCGAATTGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:29774933-29775053 1.9e-05 60_[+2]_52 chrX:11156128-11156248 1.9e-05 41_[+2]_71 chrX:13277284-13277404 1.9e-05 2_[+2]_110 chr3R:11344099-11344219 1.9e-05 55_[+2]_57 chr2R:23236970-23237090 1.9e-05 [+2]_112 chrX:8114979-8115099 1.9e-05 32_[+2]_80 chr2L:5092746-5092866 1.9e-05 59_[+2]_53 chr3L:7364870-7364990 1.9e-05 18_[+2]_94 chr3L:20603896-20604016 1.9e-05 48_[+2]_64 chr3L:3290930-3291050 3.3e-05 82_[+2]_30 chrX:10324101-10324221 3.3e-05 17_[+2]_95 chr3L:20715823-20715943 3.3e-05 52_[+2]_60 chr3L:21878428-21878548 3.3e-05 26_[+2]_86 chrX:8908316-8908436 4.6e-05 16_[+2]_96 chrX:12632122-12632242 4.6e-05 71_[+2]_41 chr2L:11955972-11956092 4.6e-05 41_[+2]_71 chrX:21056868-21056988 6.5e-05 71_[+2]_41 chrX:9634382-9634502 6.5e-05 56_[+2]_56 chr2R:1340044-1340164 6.5e-05 101_[+2]_11 chr3R:18156728-18156848 6.5e-05 4_[+2]_108 chr3L:15008784-15008904 7.4e-05 63_[+2]_49 chr3L:18105463-18105583 7.4e-05 40_[+2]_72 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAATMAG width=8 seqs=22 chr3R:29774933-29775053 ( 61) CCAATAAG 1 chrX:11156128-11156248 ( 42) CCAATAAG 1 chrX:13277284-13277404 ( 3) CCAATAAG 1 chr3R:11344099-11344219 ( 56) CCAATAAG 1 chr2R:23236970-23237090 ( 1) CCAATAAG 1 chrX:8114979-8115099 ( 33) CCAATAAG 1 chr2L:5092746-5092866 ( 60) CCAATAAG 1 chr3L:7364870-7364990 ( 19) CCAATAAG 1 chr3L:20603896-20604016 ( 49) CCAATAAG 1 chr3L:3290930-3291050 ( 83) CCAATCAG 1 chrX:10324101-10324221 ( 18) CCAATCAG 1 chr3L:20715823-20715943 ( 53) CCAATCAG 1 chr3L:21878428-21878548 ( 27) CCAATCAG 1 chrX:8908316-8908436 ( 17) CCAACAAG 1 chrX:12632122-12632242 ( 72) CCAACAAG 1 chr2L:11955972-11956092 ( 42) CCAACAAG 1 chrX:21056868-21056988 ( 72) CCAATTAG 1 chrX:9634382-9634502 ( 57) CCAATTAG 1 chr2R:1340044-1340164 ( 102) CCAATTAG 1 chr3R:18156728-18156848 ( 5) CCAATTAG 1 chr3L:15008784-15008904 ( 64) CCAACCAG 1 chr3L:18105463-18105583 ( 41) CCAACCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6807 E= 7.3e+000 -1110 231 -1110 -1110 -1110 231 -1110 -1110 174 -1110 -1110 -1110 174 -1110 -1110 -1110 -1110 17 -1110 141 87 43 -1110 -68 174 -1110 -1110 -1110 -1110 -1110 226 -1110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 22 E= 7.3e+000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.227273 0.000000 0.772727 0.545455 0.272727 0.000000 0.181818 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATMAG MEME-2 regular expression -------------------------------------------------------------------------------- CCAA[TC][AC]AG -------------------------------------------------------------------------------- Time 14.22 secs. ******************************************************************************** ******************************************************************************** MOTIF CTDRTTGG MEME-3 width = 8 sites = 23 llr = 217 E-value = 5.3e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::27:::: pos.-specific C a::::::: probability G ::43::aa matrix T :a3:aa:: bits 2.3 * ** 2.1 * ** 1.8 ** **** 1.6 ** **** Relative 1.4 ** **** Entropy 1.2 ** **** (13.6 bits) 0.9 ** ***** 0.7 ** ***** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTGATTGG consensus TG sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:2354429-2354549 78 1.33e-05 TTAAAGTTCT CTGATTGG GAGATTCCTT chr3L:20918631-20918751 3 1.33e-05 CA CTGATTGG GCTCGAATTT chr2R:20029353-20029473 101 1.33e-05 TAAATCCGAA CTGATTGG ATTACAGAGT chr3R:19902435-19902555 33 1.33e-05 CCACGCTTGT CTGATTGG AAACGGCAAG chrX:9282137-9282257 13 1.33e-05 CTGGAATCAG CTGATTGG GATGGTCAAA chr3L:416494-416614 50 1.33e-05 TCATCGGTTT CTGATTGG ATACTAATTA chr3L:2586943-2587063 70 1.33e-05 TATTTTATTT CTGATTGG GTCGCCTTTT chrX:6255079-6255199 97 2.27e-05 GCGTGTCCGG CTGGTTGG GCCGATAATG chrX:7606533-7606653 63 2.27e-05 TGGAATTCTG CTGGTTGG CGGACACTTG chrX:18611848-18611968 92 2.27e-05 gcttggagat ctggttgg agatttggtt chr2R:6450280-6450400 43 4.13e-05 tagtattatt cttattgg acatgctgat chr3R:11345062-11345182 7 4.13e-05 GGCTTT CTTATTGG CATTTCCGGG chrX:8100818-8100938 40 4.13e-05 CAAAAGAAAT CTTATTGG ACATCCAATA chr3R:17795675-17795795 102 4.13e-05 GAGCCTTTGG CTTATTGG AGGCTACTAT chr2L:10291418-10291538 11 4.13e-05 CTTATAGAGA CTTATTGG CAATATTGGA chr2L:12603496-12603616 21 5.44e-05 AATCTTTAAT CTTGTTGG AATATTTCTT chrX:13256546-13256666 79 5.44e-05 ACCAGTTGGT CTTGTTGG GCCCATTGGC chr2L:20429563-20429683 92 5.44e-05 TTGCCAGATT CTTGTTGG CGCTGCTGTC chr3R:30467200-30467320 85 7.35e-05 TATTTCTTGT CTAATTGG AAATACTTAA chrX:9121594-9121714 70 7.35e-05 AATTGGACGC CTAATTGG AAGTGCGTCG chr2L:15306937-15307057 91 7.35e-05 TCCTTCAGAC CTAATTGG AGTTTTCCCA chr2R:5885083-5885203 88 8.68e-05 AATGAGTGTT CTAGTTGG ACTAAGCATA chr3R:18156728-18156848 36 8.68e-05 ACTTTGCAGT CTAGTTGG ACACACACGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:2354429-2354549 1.3e-05 77_[+3]_35 chr3L:20918631-20918751 1.3e-05 2_[+3]_110 chr2R:20029353-20029473 1.3e-05 100_[+3]_12 chr3R:19902435-19902555 1.3e-05 32_[+3]_80 chrX:9282137-9282257 1.3e-05 12_[+3]_100 chr3L:416494-416614 1.3e-05 49_[+3]_63 chr3L:2586943-2587063 1.3e-05 69_[+3]_43 chrX:6255079-6255199 2.3e-05 96_[+3]_16 chrX:7606533-7606653 2.3e-05 62_[+3]_50 chrX:18611848-18611968 2.3e-05 91_[+3]_21 chr2R:6450280-6450400 4.1e-05 42_[+3]_70 chr3R:11345062-11345182 4.1e-05 6_[+3]_106 chrX:8100818-8100938 4.1e-05 39_[+3]_73 chr3R:17795675-17795795 4.1e-05 101_[+3]_11 chr2L:10291418-10291538 4.1e-05 10_[+3]_102 chr2L:12603496-12603616 5.4e-05 20_[+3]_92 chrX:13256546-13256666 5.4e-05 78_[+3]_34 chr2L:20429563-20429683 5.4e-05 91_[+3]_21 chr3R:30467200-30467320 7.4e-05 84_[+3]_28 chrX:9121594-9121714 7.4e-05 69_[+3]_43 chr2L:15306937-15307057 7.4e-05 90_[+3]_22 chr2R:5885083-5885203 8.7e-05 87_[+3]_25 chr3R:18156728-18156848 8.7e-05 35_[+3]_77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTDRTTGG width=8 seqs=23 chrX:2354429-2354549 ( 78) CTGATTGG 1 chr3L:20918631-20918751 ( 3) CTGATTGG 1 chr2R:20029353-20029473 ( 101) CTGATTGG 1 chr3R:19902435-19902555 ( 33) CTGATTGG 1 chrX:9282137-9282257 ( 13) CTGATTGG 1 chr3L:416494-416614 ( 50) CTGATTGG 1 chr3L:2586943-2587063 ( 70) CTGATTGG 1 chrX:6255079-6255199 ( 97) CTGGTTGG 1 chrX:7606533-7606653 ( 63) CTGGTTGG 1 chrX:18611848-18611968 ( 92) CTGGTTGG 1 chr2R:6450280-6450400 ( 43) CTTATTGG 1 chr3R:11345062-11345182 ( 7) CTTATTGG 1 chrX:8100818-8100938 ( 40) CTTATTGG 1 chr3R:17795675-17795795 ( 102) CTTATTGG 1 chr2L:10291418-10291538 ( 11) CTTATTGG 1 chr2L:12603496-12603616 ( 21) CTTGTTGG 1 chrX:13256546-13256666 ( 79) CTTGTTGG 1 chr2L:20429563-20429683 ( 92) CTTGTTGG 1 chr3R:30467200-30467320 ( 85) CTAATTGG 1 chrX:9121594-9121714 ( 70) CTAATTGG 1 chr2L:15306937-15307057 ( 91) CTAATTGG 1 chr2R:5885083-5885203 ( 88) CTAGTTGG 1 chr3R:18156728-18156848 ( 36) CTAGTTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.86794 E= 5.3e+000 -1117 231 -1117 -1117 -1117 -1117 -1117 178 -46 -1117 106 26 113 -1117 74 -1117 -1117 -1117 -1117 178 -1117 -1117 -1117 178 -1117 -1117 226 -1117 -1117 -1117 226 -1117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 23 E= 5.3e+000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.217391 0.000000 0.434783 0.347826 0.652174 0.000000 0.347826 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTDRTTGG MEME-3 regular expression -------------------------------------------------------------------------------- CT[GTA][AG]TTGG -------------------------------------------------------------------------------- Time 20.08 secs. ******************************************************************************** ******************************************************************************** MOTIF GCGGGCGC MEME-4 width = 8 sites = 11 llr = 114 E-value = 1.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::3::::2 pos.-specific C :a:23a:8 probability G a:787:a: matrix T :::::::: bits 2.3 ** ** 2.1 ** ** 1.8 ** ** 1.6 ** * *** Relative 1.4 ******** Entropy 1.2 ******** (14.9 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GCGGGCGC consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:3422933-3423053 34 3.21e-06 AAAAAGCGCA GCGGGCGC CTATATTTTA chrX:21056868-21056988 103 3.21e-06 ATGGAATTGT GCGGGCGC CTTAGCTCCT chr2L:15043876-15043996 98 6.33e-06 CAAACTACTG GCGGCCGC CTGTGTTCAT chr3R:18156728-18156848 83 6.33e-06 CTTCAATATG GCGGCCGC GACAAAAACG chr2L:8683366-8683486 68 1.09e-05 CCGGTATTTG GCAGGCGC CGTTCAACGT chrX:16648529-16648649 1 1.09e-05 . GCAGGCGc accacacaca chr3L:15517925-15518045 85 1.09e-05 GGAGCATCTT GCAGGCGC AGGAACAGCA chr3R:7549497-7549617 22 1.40e-05 AATTGAAGCT GCGCGCGC AGGTAACATG chrX:8114979-8115099 18 1.40e-05 AAATGTACAC GCGCGCGC TGACGTTCCA chr3L:11876202-11876322 76 1.88e-05 GCGCCATCTG GCGGGCGA TGGCAGGAGA chr4:570522-570642 88 3.53e-05 TTACGTTAAC GCGGCCGA TCCAGCTGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:3422933-3423053 3.2e-06 33_[+4]_79 chrX:21056868-21056988 3.2e-06 102_[+4]_10 chr2L:15043876-15043996 6.3e-06 97_[+4]_15 chr3R:18156728-18156848 6.3e-06 82_[+4]_30 chr2L:8683366-8683486 1.1e-05 67_[+4]_45 chrX:16648529-16648649 1.1e-05 [+4]_112 chr3L:15517925-15518045 1.1e-05 84_[+4]_28 chr3R:7549497-7549617 1.4e-05 21_[+4]_91 chrX:8114979-8115099 1.4e-05 17_[+4]_95 chr3L:11876202-11876322 1.9e-05 75_[+4]_37 chr4:570522-570642 3.5e-05 87_[+4]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCGGGCGC width=8 seqs=11 chr2L:3422933-3423053 ( 34) GCGGGCGC 1 chrX:21056868-21056988 ( 103) GCGGGCGC 1 chr2L:15043876-15043996 ( 98) GCGGCCGC 1 chr3R:18156728-18156848 ( 83) GCGGCCGC 1 chr2L:8683366-8683486 ( 68) GCAGGCGC 1 chrX:16648529-16648649 ( 1) GCAGGCGC 1 chr3L:15517925-15518045 ( 85) GCAGGCGC 1 chr3R:7549497-7549617 ( 22) GCGCGCGC 1 chrX:8114979-8115099 ( 18) GCGCGCGC 1 chr3L:11876202-11876322 ( 76) GCGGGCGA 1 chr4:570522-570642 ( 88) GCGGCCGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.6812 E= 1.1e+004 -1010 -1010 226 -1010 -1010 231 -1010 -1010 -13 -1010 180 -1010 -1010 -15 197 -1010 -1010 43 180 -1010 -1010 231 -1010 -1010 -1010 -1010 226 -1010 -71 202 -1010 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 11 E= 1.1e+004 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.272727 0.000000 0.727273 0.000000 0.000000 0.181818 0.818182 0.000000 0.000000 0.272727 0.727273 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.181818 0.818182 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGGGCGC MEME-4 regular expression -------------------------------------------------------------------------------- GC[GA]G[GC]CGC -------------------------------------------------------------------------------- Time 25.92 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCAACTG MEME-5 width = 8 sites = 7 llr = 79 E-value = 5.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::aa::: pos.-specific C :aa::a:: probability G :::::::a matrix T a:::::a: bits 2.3 ** * * 2.1 ** * * 1.8 ******** 1.6 ******** Relative 1.4 ******** Entropy 1.2 ******** (16.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCCAACTG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:9418508-9418628 48 1.29e-05 AAAACGAAAA TCCAACTG GAACGCAAAC chr3R:24580079-24580199 76 1.29e-05 AGAAGGCAAT TCCAACTG AAGTTCCTCC chr2R:12343834-12343954 76 1.29e-05 GCCATTGATT TCCAACTG GATGGTGAGA chr2L:5270666-5270786 89 1.29e-05 TACATTCTTT TCCAACTG GCAACGATAT chr3R:16898514-16898634 25 1.29e-05 TTAAATTAAA TCCAACTG CAGTGAAGAC chr2L:11955972-11956092 83 1.29e-05 ACGAACCGCG TCCAACTG GAAACCAATT chrX:3186643-3186763 96 1.29e-05 GTGCAGAAGT TCCAACTG ATAGAGCGTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:9418508-9418628 1.3e-05 47_[+5]_65 chr3R:24580079-24580199 1.3e-05 75_[+5]_37 chr2R:12343834-12343954 1.3e-05 75_[+5]_37 chr2L:5270666-5270786 1.3e-05 88_[+5]_24 chr3R:16898514-16898634 1.3e-05 24_[+5]_88 chr2L:11955972-11956092 1.3e-05 82_[+5]_30 chrX:3186643-3186763 1.3e-05 95_[+5]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCAACTG width=8 seqs=7 chr3R:9418508-9418628 ( 48) TCCAACTG 1 chr3R:24580079-24580199 ( 76) TCCAACTG 1 chr2R:12343834-12343954 ( 76) TCCAACTG 1 chr2L:5270666-5270786 ( 89) TCCAACTG 1 chr3R:16898514-16898634 ( 25) TCCAACTG 1 chr2L:11955972-11956092 ( 83) TCCAACTG 1 chrX:3186643-3186763 ( 96) TCCAACTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.8221 E= 5.5e+003 -945 -945 -945 178 -945 230 -945 -945 -945 230 -945 -945 174 -945 -945 -945 174 -945 -945 -945 -945 230 -945 -945 -945 -945 -945 178 -945 -945 226 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 7 E= 5.5e+003 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCAACTG MEME-5 regular expression -------------------------------------------------------------------------------- TCCAACTG -------------------------------------------------------------------------------- Time 31.72 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:21878428-21878548 1.11e-04 26_[+2(3.27e-05)]_22_[+1(6.06e-05)]_\ 56 chrX:16102958-16103078 3.62e-03 70_[+2(3.27e-05)]_42 chrX:3187732-3187852 3.09e-04 60_[+1(1.33e-05)]_52 chr3R:13842671-13842791 6.75e-02 120 chr2L:15746121-15746241 2.02e-03 104_[+2(3.27e-05)]_8 chr2L:1979542-1979662 1.64e-02 112_[+3(2.27e-05)] chrX:8525896-8526016 4.06e-03 43_[+3(1.33e-05)]_69 chrX:9117970-9118090 3.40e-03 4_[+1(6.06e-05)]_108 chr2L:20429563-20429683 6.85e-06 47_[+1(1.33e-05)]_36_[+3(5.44e-05)]_\ 21 chr3L:20603896-20604016 1.04e-04 48_[+2(1.95e-05)]_37_[+1(1.33e-05)]_\ 19 chr2R:24345042-24345162 1.86e-02 120 chr2L:10291418-10291538 1.58e-04 10_[+3(4.13e-05)]_14_[+1(1.33e-05)]_\ 80 chr3R:6707892-6708012 1.40e-02 85_[+1(6.06e-05)]_27 chr3L:2586943-2587063 2.59e-05 69_[+3(1.33e-05)]_21_[+1(1.33e-05)]_\ 14 chrX:13104678-13104798 7.13e-03 66_[+1(1.33e-05)]_46 chr2R:16187016-16187136 6.18e-02 120 chr3R:13422317-13422437 1.41e-01 120 chrX:1775366-1775486 3.87e-03 64_[+1(2.25e-05)]_48 chr2R:17498848-17498968 1.10e-01 120 chr3R:13056692-13056812 1.75e-03 69_[+1(1.33e-05)]_43 chr2L:15306937-15307057 1.78e-04 41_[+1(1.33e-05)]_41_[+1(6.06e-05)]_\ 22 chr3L:8066851-8066971 1.74e-03 59_[+1(4.15e-05)]_53 chr2R:17849729-17849849 1.75e-01 120 chrX:18611848-18611968 5.09e-02 67_[+3(8.68e-05)]_16_[+3(2.27e-05)]_\ 21 chr2R:25175653-25175773 2.89e-03 40_[+1(9.64e-05)]_72 chr2R:11747571-11747691 3.28e-02 120 chr2R:8066592-8066712 1.86e-03 64_[+2(3.27e-05)]_48 chr2R:16586842-16586962 4.97e-02 60_[+3(4.13e-05)]_52 chr3L:15276347-15276467 4.07e-02 91_[+2(1.95e-05)]_21 chr3R:18156728-18156848 6.99e-08 4_[+1(4.15e-05)]_5_[+1(1.33e-05)]_\ 10_[+3(8.68e-05)]_39_[+4(6.33e-06)]_30 chr2R:23204699-23204819 1.67e-02 58_[+3(4.13e-05)]_54 chr3L:5998401-5998521 4.53e-03 30_[+2(3.27e-05)]_82 chr3L:20715823-20715943 3.31e-03 52_[+2(3.27e-05)]_9_[+2(3.27e-05)]_\ 43 chr2R:24291079-24291199 6.66e-02 120 chr3R:29143595-29143715 4.84e-05 14_[+4(6.21e-05)]_47_[+5(1.29e-05)]_\ 43 chr3L:7714158-7714278 5.51e-03 24_[+2(1.95e-05)]_21_[+2(8.76e-05)]_\ 59 chr3L:12417855-12417975 8.54e-01 120 chr3L:14970352-14970472 5.78e-01 120 chr2R:7939854-7939974 4.98e-03 44_[+1(6.06e-05)]_68 chrX:6802514-6802634 1.03e-02 45_[+1(4.15e-05)]_67 chr2R:5885083-5885203 1.59e-03 87_[+3(8.68e-05)]_25 chr2R:12965753-12965873 2.55e-01 120 chr2R:19422386-19422506 3.53e-02 120 chr3L:7364870-7364990 1.12e-04 18_[+2(1.95e-05)]_4_[+1(9.64e-05)]_\ 82 chr3L:805337-805457 7.36e-02 120 chr2L:5092746-5092866 1.53e-03 18_[+2(3.27e-05)]_33_[+2(1.95e-05)]_\ 53 chr3R:24945561-24945681 6.23e-04 108_[+1(1.33e-05)]_4 chr2R:17581863-17581983 3.88e-02 120 chrX:5537102-5537222 3.99e-04 9_[+3(1.33e-05)]_103 chr3R:13056899-13057019 5.20e-01 120 chrX:15566178-15566298 3.72e-03 46_[+2(3.27e-05)]_66 chrX:8114979-8115099 6.50e-06 17_[+4(1.40e-05)]_7_[+2(1.95e-05)]_\ 45_[+1(2.25e-05)]_27 chrX:7606533-7606653 2.61e-03 62_[+3(2.27e-05)]_50 chr3L:16417354-16417474 8.31e-01 120 chrX:9121594-9121714 1.73e-04 57_[+1(1.33e-05)]_4_[+1(6.06e-05)]_\ 43 chr2R:23236970-23237090 3.33e-04 [+2(1.95e-05)]_20_[+1(1.33e-05)]_84 chrX:15840142-15840262 6.08e-02 120 chr3L:5359736-5359856 9.18e-01 120 chrX:17108145-17108265 9.42e-03 111_[+3(1.33e-05)]_1 chr3L:12749074-12749194 1.26e-02 10_[+1(6.06e-05)]_102 chr3L:16485311-16485431 1.33e-02 120 chrX:10931395-10931515 2.46e-01 120 chr3L:11020206-11020326 4.52e-03 120 chrX:3186643-3186763 1.36e-02 95_[+5(1.29e-05)]_17 chr3L:16417154-16417274 1.04e-01 120 chrX:10324101-10324221 2.36e-05 17_[+2(3.27e-05)]_34_[+1(1.33e-05)]_\ 53 chr3L:19663018-19663138 6.89e-01 120 chr3R:13981084-13981204 6.30e-04 27_[+1(1.33e-05)]_85 chr2L:11955972-11956092 4.68e-07 41_[+2(4.62e-05)]_33_[+5(1.29e-05)]_\ 4_[+1(1.33e-05)]_18 chr3L:3619011-3619131 3.67e-01 120 chr3R:8464007-8464127 1.51e-02 86_[+2(1.95e-05)]_26 chr3L:14618591-14618711 1.32e-03 81_[+2(1.95e-05)]_31 chrX:22535906-22536026 1.46e-03 69_[+1(6.06e-05)]_43 chrX:15875672-15875792 1.11e-02 41_[+1(6.06e-05)]_71 chr2R:1340044-1340164 6.33e-05 59_[+1(1.33e-05)]_34_[+1(4.15e-05)]_\ 11 chr3L:416494-416614 4.82e-06 49_[+3(1.33e-05)]_27_[+1(4.15e-05)]_\ 28 chrX:9282137-9282257 4.25e-05 12_[+3(1.33e-05)]_39_[+1(1.33e-05)]_\ 53 chrX:5697818-5697938 1.06e-01 120 chr3L:10321507-10321627 1.35e-01 120 chrX:12658569-12658689 5.57e-04 17_[+3(1.33e-05)]_95 chr2R:7008690-7008810 6.15e-01 120 chr2L:8304761-8304881 2.23e-02 120 chrX:13256546-13256666 1.39e-02 78_[+3(5.44e-05)]_34 chrX:15696974-15697094 2.90e-02 120 chr3L:15517925-15518045 2.70e-02 84_[+4(1.09e-05)]_28 chr2L:15043876-15043996 2.21e-02 97_[+4(6.33e-06)]_15 chr3R:19902435-19902555 2.85e-05 32_[+3(1.33e-05)]_21_[+2(3.27e-05)]_\ 51 chr2R:24347106-24347226 2.60e-01 120 chrX:4199021-4199141 1.66e-03 59_[+1(4.15e-05)]_53 chr2L:12603496-12603616 1.32e-04 20_[+3(5.44e-05)]_15_[+1(1.33e-05)]_\ 69 chrX:9634382-9634502 3.90e-05 56_[+1(4.15e-05)]_3_[+1(1.33e-05)]_\ 45 chr3R:32050810-32050930 3.15e-03 39_[+1(4.15e-05)]_73 chrX:10386356-10386476 5.11e-03 81_[+1(2.25e-05)]_31 chr3L:6653196-6653316 2.27e-01 120 chr2R:20029353-20029473 1.99e-04 71_[+1(1.33e-05)]_21_[+3(1.33e-05)]_\ 12 chr3R:9710341-9710461 1.29e-02 55_[+3(4.13e-05)]_57 chrX:8721599-8721719 5.35e-01 120 chr2L:5366932-5367052 3.06e-04 81_[+1(2.25e-05)]_31 chr2L:6356791-6356911 9.54e-01 120 chrX:6255079-6255199 2.66e-05 32_[+1(1.33e-05)]_56_[+3(2.27e-05)]_\ 16 chr3L:18105463-18105583 7.71e-03 40_[+2(7.44e-05)]_14_[+2(3.27e-05)]_\ 50 chrX:2221709-2221829 7.95e-03 7_[+1(2.25e-05)]_105 chrX:9131391-9131511 8.10e-02 120 chr2R:16572137-16572257 5.16e-02 120 chrX:3578988-3579108 1.84e-03 44_[+1(4.15e-05)]_68 chr3R:11344099-11344219 2.11e-03 55_[+2(1.95e-05)]_47_[+2(1.95e-05)]_\ 2 chr3R:19939327-19939447 1.37e-01 120 chr3L:3290930-3291050 5.93e-04 16_[+2(3.27e-05)]_58_[+2(3.27e-05)]_\ 30 chr3L:22742473-22742593 4.28e-02 120 chrX:12613334-12613454 7.28e-04 28_[+2(3.27e-05)]_84 chr2R:7473447-7473567 9.26e-01 120 chr2R:13448666-13448786 4.63e-01 120 chr3R:13286268-13286388 6.73e-02 120 chr3R:23889257-23889377 3.31e-04 48_[+1(1.33e-05)]_64 chr2L:6820242-6820362 4.95e-04 31_[+1(6.06e-05)]_81 chr3R:9379525-9379645 3.39e-03 55_[+1(4.15e-05)]_57 chr2L:447241-447361 1.40e-03 18_[+1(6.06e-05)]_94 chr3L:4133307-4133427 3.30e-01 120 chrX:12632122-12632242 1.50e-03 71_[+2(4.62e-05)]_3_[+3(4.13e-05)]_\ 30 chrX:12940535-12940655 1.61e-02 120 chrX:16648529-16648649 6.52e-05 [+4(1.09e-05)]_66_[+3(1.33e-05)]_38 chr3R:14037483-14037603 3.19e-02 120 chr2L:10647873-10647993 3.41e-01 120 chr3L:21035394-21035514 1.96e-02 120 chr2R:12885214-12885334 7.56e-03 66_[+3(4.13e-05)]_46 chrX:6540081-6540201 1.94e-01 120 chrX:9165021-9165141 4.61e-02 120 chr3R:14026297-14026417 7.40e-03 31_[+1(6.06e-05)]_81 chrX:7196973-7197093 5.64e-04 90_[+1(1.33e-05)]_22 chr3L:11126238-11126358 8.80e-04 56_[+1(1.33e-05)]_56 chrX:7522066-7522186 8.75e-03 75_[+1(4.15e-05)]_37 chrX:836079-836199 8.04e-02 120 chr3R:5995486-5995606 2.25e-02 120 chrX:19642885-19643005 1.38e-02 44_[+1(6.06e-05)]_68 chr3L:11876202-11876322 2.47e-04 75_[+4(1.88e-05)]_37 chr2L:12201097-12201217 8.94e-02 120 chr2L:9121051-9121171 1.73e-01 120 chrX:16839151-16839271 7.38e-01 120 chr2L:2577227-2577347 5.69e-02 120 chr3L:3593661-3593781 8.07e-04 6_[+2(3.27e-05)]_106 chr3R:17795675-17795795 1.45e-03 56_[+1(6.06e-05)]_37_[+3(4.13e-05)]_\ 11 chr3R:16898514-16898634 1.25e-04 24_[+5(1.29e-05)]_31_[+1(1.33e-05)]_\ 49 chrX:19191165-19191285 2.74e-01 120 chrX:8100818-8100938 7.23e-04 39_[+3(4.13e-05)]_73 chr3R:19939081-19939201 9.07e-01 120 chr3R:26007468-26007588 1.96e-01 120 chr3L:18015308-18015428 5.99e-03 64_[+2(3.27e-05)]_48 chr2R:17815290-17815410 1.37e-03 74_[+2(3.27e-05)]_38 chr2R:10669858-10669978 7.15e-02 120 chrX:7252627-7252747 1.53e-01 120 chr2L:20310705-20310825 1.27e-03 47_[+1(1.33e-05)]_65 chr2R:20832976-20833096 4.89e-01 120 chrX:8908316-8908436 2.96e-05 16_[+2(4.62e-05)]_66_[+1(1.33e-05)]_\ 22 chrX:9165224-9165344 4.07e-01 120 chr3L:14488804-14488924 6.72e-01 120 chr3L:21706658-21706778 9.38e-02 120 chrX:16104173-16104293 1.78e-01 120 chr2L:13219452-13219572 3.00e-01 120 chr3R:20543852-20543972 3.72e-01 120 chr3L:171741-171861 1.29e-03 32_[+1(1.33e-05)]_80 chrX:6678823-6678943 3.01e-05 41_[+1(1.33e-05)]_31_[+1(1.33e-05)]_\ 9_[+1(1.33e-05)]_15 chr3R:6999293-6999413 1.90e-01 120 chr2R:25076236-25076356 3.27e-01 120 chrX:17336576-17336696 1.13e-02 120 chrX:21056868-21056988 3.49e-07 31_[+1(1.33e-05)]_32_[+1(4.15e-05)]_\ 23_[+4(3.21e-06)]_10 chr3R:26040992-26041112 4.09e-02 106_[+3(4.13e-05)]_6 chrX:13277284-13277404 1.15e-02 2_[+2(1.95e-05)]_110 chr2L:8683366-8683486 2.28e-03 67_[+4(1.09e-05)]_45 chrX:20632322-20632442 4.06e-01 120 chr3R:11345288-11345408 7.66e-01 120 chrX:170760-170880 5.46e-03 6_[+2(1.95e-05)]_106 chrX:3288566-3288686 9.75e-04 93_[+3(1.33e-05)]_19 chrX:9110270-9110390 1.28e-04 45_[+1(1.33e-05)]_67 chr2L:9522456-9522576 4.75e-01 120 chrX:12940755-12940875 7.65e-01 120 chr2R:17394106-17394226 2.21e-02 120 chr3L:11020418-11020538 2.30e-01 120 chr3L:15008784-15008904 5.61e-04 20_[+3(1.33e-05)]_35_[+2(7.44e-05)]_\ 49 chrX:9282355-9282475 9.57e-01 120 chr3L:5878865-5878985 5.74e-03 86_[+1(6.06e-05)]_26 chr3L:3198536-3198656 7.29e-02 120 chrX:451807-451927 3.43e-02 120 chr3R:16730834-16730954 8.29e-01 120 chr3R:9880252-9880372 2.07e-04 83_[+1(1.33e-05)]_29 chr3R:29043233-29043353 8.53e-02 120 chr3R:11345062-11345182 1.43e-05 6_[+3(4.13e-05)]_41_[+1(1.33e-05)]_\ 57 chr3L:12399572-12399692 2.86e-01 120 chrX:7197174-7197294 5.59e-03 16_[+1(1.33e-05)]_96 chr3L:15268334-15268454 9.86e-01 120 chr2R:16841377-16841497 8.38e-01 120 chr2L:20488730-20488850 3.97e-01 120 chr3R:21640925-21641045 3.80e-01 120 chr2L:6076256-6076376 6.69e-04 44_[+1(1.33e-05)]_68 chr3R:10048598-10048718 3.03e-01 120 chrX:6080659-6080779 2.60e-02 120 chrX:12633349-12633469 1.35e-02 57_[+2(3.27e-05)]_55 chr3L:14950068-14950188 8.61e-02 120 chr3R:4969515-4969635 9.81e-01 120 chr2R:18819827-18819947 2.89e-01 120 chrX:6701094-6701214 2.73e-03 41_[+1(9.64e-05)]_71 chr2L:18598257-18598377 7.23e-03 45_[+1(4.15e-05)]_67 chr2L:8297165-8297285 9.93e-04 17_[+1(1.33e-05)]_95 chr3R:15367607-15367727 2.78e-02 2_[+2(7.44e-05)]_110 chr3R:7549497-7549617 1.66e-04 21_[+4(1.40e-05)]_52_[+3(1.33e-05)]_\ 31 chrX:16648245-16648365 6.55e-01 120 chr2L:5270666-5270786 1.03e-04 88_[+5(1.29e-05)]_16_[+1(4.15e-05)] chr3R:30000377-30000497 2.33e-01 120 chr3R:23733661-23733781 2.16e-03 51_[+5(1.29e-05)]_61 chr2R:2589649-2589769 6.26e-04 52_[+2(3.27e-05)]_60 chr2R:10675006-10675126 3.44e-02 50_[+3(8.68e-05)]_62 chr2R:12343834-12343954 1.64e-05 8_[+1(2.25e-05)]_59_[+5(1.29e-05)]_\ 37 chrX:16587428-16587548 6.83e-01 120 chr3L:5879065-5879185 3.75e-01 120 chr3R:24580079-24580199 1.39e-05 43_[+3(1.33e-05)]_24_[+5(1.29e-05)]_\ 37 chr2R:19481265-19481385 6.37e-03 30_[+1(2.25e-05)]_82 chr2L:3422933-3423053 6.43e-07 33_[+4(3.21e-06)]_21_[+1(1.33e-05)]_\ 50 chr3R:9418508-9418628 3.22e-05 47_[+5(1.29e-05)]_12_[+3(1.33e-05)]_\ 45 chr2L:10646854-10646974 6.87e-01 120 chr2R:9231469-9231589 7.67e-02 120 chr3L:15172970-15173090 3.67e-02 120 chr3R:20543651-20543771 3.18e-01 120 chrX:15817025-15817145 1.01e-03 104_[+1(6.06e-05)]_8 chr3R:17938520-17938640 6.95e-04 27_[+1(1.33e-05)]_85 chr4:570522-570642 7.04e-06 26_[+1(1.33e-05)]_53_[+4(3.53e-05)]_\ [+5(7.35e-05)]_17 chr3L:20918631-20918751 2.04e-03 2_[+3(1.33e-05)]_50_[+1(6.06e-05)]_\ 52 chrX:6701293-6701413 1.74e-03 26_[+1(1.33e-05)]_86 chrX:15449502-15449622 1.38e-03 29_[+2(3.27e-05)]_83 chr2L:9454822-9454942 3.93e-01 120 chrX:11156128-11156248 1.85e-05 41_[+2(1.95e-05)]_7_[+1(1.33e-05)]_\ 56 chr3R:22396842-22396962 1.41e-02 37_[+3(4.13e-05)]_75 chr2R:9968579-9968699 1.90e-02 14_[+2(1.95e-05)]_98 chr2R:17849941-17850061 1.00e+00 120 chr2L:10648072-10648192 1.05e-01 120 chrX:18516555-18516675 4.11e-01 120 chr2R:23204898-23205018 3.91e-02 120 chr3R:30467200-30467320 2.18e-04 84_[+1(6.06e-05)]_10_[+1(4.15e-05)]_\ 10 chr3L:17998138-17998258 9.13e-01 120 chr3L:3782742-3782862 3.18e-01 120 chrX:2354429-2354549 6.26e-04 77_[+3(1.33e-05)]_21_[+1(6.06e-05)]_\ 6 chrX:16101699-16101819 4.27e-02 120 chr3R:11619235-11619355 7.61e-01 120 chr3L:2864560-2864680 4.46e-01 120 chr3L:22792142-22792262 2.72e-01 120 chr3L:19908220-19908340 4.67e-03 52_[+1(4.15e-05)]_60 chr3L:10321712-10321832 8.26e-01 120 chr2L:8300346-8300466 2.11e-01 120 chr2R:6450280-6450400 5.50e-03 42_[+3(4.13e-05)]_11_[+3(1.33e-05)]_\ 51 chr2R:12886924-12887044 7.55e-04 37_[+1(1.33e-05)]_75 chr3R:15246762-15246882 3.29e-03 26_[+1(1.33e-05)]_86 chr3R:29774933-29775053 1.17e-04 60_[+2(1.95e-05)]_40_[+1(6.06e-05)]_\ 4 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n02.farnam.hpc.yale.internal ********************************************************************************