******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/gcm.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2L:1450181-1450301 1.0000 120 chrX:18560723-18560843 1.0000 120 chr2L:16616421-16616541 1.0000 120 chr3R:29217448-29217568 1.0000 120 chr3R:30032420-30032540 1.0000 120 chr3L:17382129-17382249 1.0000 120 chr2R:12462818-12462938 1.0000 120 chrX:6611229-6611349 1.0000 120 chr2L:3561870-3561990 1.0000 120 chr3L:5781478-5781598 1.0000 120 chr3R:12006533-12006653 1.0000 120 chrX:1231338-1231458 1.0000 120 chr3R:22676233-22676353 1.0000 120 chr2R:19494879-19494999 1.0000 120 chr2R:17009661-17009781 1.0000 120 chr2L:14521975-14522095 1.0000 120 chr2L:3295843-3295963 1.0000 120 chrX:18780144-18780264 1.0000 120 chr3R:21021668-21021788 1.0000 120 chr3L:7326814-7326934 1.0000 120 chr3R:19333536-19333656 1.0000 120 chr2R:9123047-9123167 1.0000 120 chr3R:24920056-24920176 1.0000 120 chr3L:13231319-13231439 1.0000 120 chrX:12079409-12079529 1.0000 120 chr2R:19257328-19257448 1.0000 120 chr2R:20590007-20590127 1.0000 120 chr3L:15779096-15779216 1.0000 120 chr3R:5093889-5094009 1.0000 120 chr2L:8311878-8311998 1.0000 120 chr3R:8868537-8868657 1.0000 120 chr2R:23585558-23585678 1.0000 120 chr3R:14492420-14492540 1.0000 120 chr3R:8786778-8786898 1.0000 120 chr3L:2391070-2391190 1.0000 120 chr3R:21864655-21864775 1.0000 120 chr3L:9054378-9054498 1.0000 120 chr3R:19860564-19860684 1.0000 120 chr3L:1730010-1730130 1.0000 120 chr3R:16352932-16353052 1.0000 120 chr2R:18414860-18414980 1.0000 120 chr3L:14816621-14816741 1.0000 120 chr3L:18631242-18631362 1.0000 120 chr2L:8616231-8616351 1.0000 120 chr2L:18662194-18662314 1.0000 120 chr3R:9182658-9182778 1.0000 120 chr2R:6965200-6965320 1.0000 120 chrX:4544519-4544639 1.0000 120 chr2L:4354018-4354138 1.0000 120 chr3R:30763521-30763641 1.0000 120 chr3R:23294670-23294790 1.0000 120 chr3L:16966268-16966388 1.0000 120 chr2R:22691652-22691772 1.0000 120 chr2R:14197806-14197926 1.0000 120 chr3R:29573790-29573910 1.0000 120 chr3R:27109594-27109714 1.0000 120 chr2R:9109071-9109191 1.0000 120 chr2R:6140097-6140217 1.0000 120 chr3R:19625383-19625503 1.0000 120 chr2L:21029298-21029418 1.0000 120 chr2R:8642422-8642542 1.0000 120 chr2L:21776601-21776721 1.0000 120 chr3R:10503947-10504067 1.0000 120 chr3L:12404638-12404758 1.0000 120 chr3R:30772506-30772626 1.0000 120 chr2R:12461082-12461202 1.0000 120 chr2L:8833151-8833271 1.0000 120 chr3R:4242648-4242768 1.0000 120 chrX:8524250-8524370 1.0000 120 chrX:2595239-2595359 1.0000 120 chr3R:21430936-21431056 1.0000 120 chr3R:17950655-17950775 1.0000 120 chr3R:20889205-20889325 1.0000 120 chr3R:23309941-23310061 1.0000 120 chrX:4517845-4517965 1.0000 120 chr3L:15351898-15352018 1.0000 120 chr2L:8832950-8833070 1.0000 120 chr3R:19470717-19470837 1.0000 120 chrX:1372825-1372945 1.0000 120 chr2L:3664802-3664922 1.0000 120 chr2R:19881830-19881950 1.0000 120 chrX:6610373-6610493 1.0000 120 chr2L:7279956-7280076 1.0000 120 chr3R:29299146-29299266 1.0000 120 chr3R:27556735-27556855 1.0000 120 chr3L:17455649-17455769 1.0000 120 chr2R:23089667-23089787 1.0000 120 chr4:662277-662397 1.0000 120 chr3R:18330586-18330706 1.0000 120 chr2L:7125509-7125629 1.0000 120 chr2R:21506382-21506502 1.0000 120 chrX:4589104-4589224 1.0000 120 chr2L:3603223-3603343 1.0000 120 chr2R:19484309-19484429 1.0000 120 chr3R:19935930-19936050 1.0000 120 chr3L:15325573-15325693 1.0000 120 chr2R:24839211-24839331 1.0000 120 chr3L:20783974-20784094 1.0000 120 chr3R:5093097-5093217 1.0000 120 chr3L:10392563-10392683 1.0000 120 chr3L:14664565-14664685 1.0000 120 chr3R:29545851-29545971 1.0000 120 chr3R:16553932-16554052 1.0000 120 chr2L:8986308-8986428 1.0000 120 chr2R:21231544-21231664 1.0000 120 chr2R:22078577-22078697 1.0000 120 chr3L:12678248-12678368 1.0000 120 chr3L:22121654-22121774 1.0000 120 chr3R:19994669-19994789 1.0000 120 chrX:7704275-7704395 1.0000 120 chr2L:8580334-8580454 1.0000 120 chr2R:6961405-6961525 1.0000 120 chr2L:9589060-9589180 1.0000 120 chrX:15541489-15541609 1.0000 120 chr2R:17496415-17496535 1.0000 120 chr3R:10652100-10652220 1.0000 120 chr3L:19037865-19037985 1.0000 120 chr2R:7478167-7478287 1.0000 120 chr2L:9607196-9607316 1.0000 120 chr3R:17952574-17952694 1.0000 120 chr3R:5036196-5036316 1.0000 120 chr3L:371390-371510 1.0000 120 chr3R:16258457-16258577 1.0000 120 chr2R:17006857-17006977 1.0000 120 chr2L:8546838-8546958 1.0000 120 chr3L:20286917-20287037 1.0000 120 chr2L:9608303-9608423 1.0000 120 chr3L:743407-743527 1.0000 120 chr3L:9716555-9716675 1.0000 120 chr3R:5062334-5062454 1.0000 120 chr3L:15774388-15774508 1.0000 120 chr2L:19247340-19247460 1.0000 120 chr2R:21352821-21352941 1.0000 120 chr2L:7131904-7132024 1.0000 120 chr2R:23911887-23912007 1.0000 120 chr2R:22404500-22404620 1.0000 120 chr3R:21889054-21889174 1.0000 120 chr2L:10562891-10563011 1.0000 120 chr3L:723788-723908 1.0000 120 chr2L:14477699-14477819 1.0000 120 chr3R:9392197-9392317 1.0000 120 chr2L:19388193-19388313 1.0000 120 chr3L:18350403-18350523 1.0000 120 chr2L:19146124-19146244 1.0000 120 chr3R:20297469-20297589 1.0000 120 chr3L:10666855-10666975 1.0000 120 chr2R:15750299-15750419 1.0000 120 chr2R:9145693-9145813 1.0000 120 chr4:506819-506939 1.0000 120 chr3L:646543-646663 1.0000 120 chr3R:16376306-16376426 1.0000 120 chr2L:505193-505313 1.0000 120 chr3R:9129640-9129760 1.0000 120 chr3L:11336240-11336360 1.0000 120 chr2R:22398421-22398541 1.0000 120 chr3R:8916127-8916247 1.0000 120 chr3L:19164455-19164575 1.0000 120 chr2L:3831680-3831800 1.0000 120 chr3L:109023-109143 1.0000 120 chr3R:18236026-18236146 1.0000 120 chr3L:22344819-22344939 1.0000 120 chr2L:5430830-5430950 1.0000 120 chr2L:6182965-6183085 1.0000 120 chr2R:18443157-18443277 1.0000 120 chr2L:5896434-5896554 1.0000 120 chr2R:11552221-11552341 1.0000 120 chr3L:12298304-12298424 1.0000 120 chr2L:21322287-21322407 1.0000 120 chr3L:14287711-14287831 1.0000 120 chr2L:6187745-6187865 1.0000 120 chrX:4672188-4672308 1.0000 120 chr2R:14884932-14885052 1.0000 120 chr3R:14711919-14712039 1.0000 120 chr2L:11973502-11973622 1.0000 120 chr3R:16277772-16277892 1.0000 120 chr2R:13334864-13334984 1.0000 120 chr2L:5241654-5241774 1.0000 120 chr2L:18507112-18507232 1.0000 120 chr2L:14387573-14387693 1.0000 120 chr2L:1147870-1147990 1.0000 120 chr2R:6599490-6599610 1.0000 120 chr2R:17405506-17405626 1.0000 120 chr3L:3386711-3386831 1.0000 120 chrX:15065276-15065396 1.0000 120 chr2R:20859911-20860031 1.0000 120 chr3R:29558419-29558539 1.0000 120 chr3R:7103015-7103135 1.0000 120 chr2R:14968405-14968525 1.0000 120 chr3L:22133051-22133171 1.0000 120 chr2R:8638553-8638673 1.0000 120 chr3R:23292396-23292516 1.0000 120 chr3R:24620670-24620790 1.0000 120 chr2L:14540821-14540941 1.0000 120 chr2L:8171528-8171648 1.0000 120 chr2R:17169414-17169534 1.0000 120 chr2L:3843758-3843878 1.0000 120 chr2R:15111349-15111469 1.0000 120 chr3L:1807593-1807713 1.0000 120 chr3L:15767914-15768034 1.0000 120 chr3R:8127369-8127489 1.0000 120 chr3L:15010555-15010675 1.0000 120 chr2R:22368764-22368884 1.0000 120 chr2R:21877365-21877485 1.0000 120 chrX:5893396-5893516 1.0000 120 chr3L:9897851-9897971 1.0000 120 chr3R:30056378-30056498 1.0000 120 chr2L:848687-848807 1.0000 120 chr3R:14466453-14466573 1.0000 120 chr3L:11381159-11381279 1.0000 120 chr2R:11787482-11787602 1.0000 120 chr3R:5098117-5098237 1.0000 120 chr3L:10906827-10906947 1.0000 120 chr2R:19818121-19818241 1.0000 120 chr3R:13464756-13464876 1.0000 120 chr2L:6553925-6554045 1.0000 120 chrX:3394549-3394669 1.0000 120 chrX:4518054-4518174 1.0000 120 chr3R:21237280-21237400 1.0000 120 chr3R:24846777-24846897 1.0000 120 chr2R:11570728-11570848 1.0000 120 chr2L:19897601-19897721 1.0000 120 chr3R:19907900-19908020 1.0000 120 chr2R:23174685-23174805 1.0000 120 chr3R:29291249-29291369 1.0000 120 chr3R:9547148-9547268 1.0000 120 chr2L:8618694-8618814 1.0000 120 chr2L:1395919-1396039 1.0000 120 chr3L:9092517-9092637 1.0000 120 chr3R:5701247-5701367 1.0000 120 chr2R:9307545-9307665 1.0000 120 chr2R:17401197-17401317 1.0000 120 chr2R:24881939-24882059 1.0000 120 chrX:4606573-4606693 1.0000 120 chr3L:2392893-2393013 1.0000 120 chrX:18905504-18905624 1.0000 120 chr3R:14801294-14801414 1.0000 120 chr3L:10520921-10521041 1.0000 120 chr3R:7122743-7122863 1.0000 120 chr2R:12924673-12924793 1.0000 120 chr3R:14751185-14751305 1.0000 120 chrX:2399628-2399748 1.0000 120 chr3R:16566609-16566729 1.0000 120 chr3R:23385034-23385154 1.0000 120 chr3R:18228973-18229093 1.0000 120 chr3L:3126589-3126709 1.0000 120 chr2R:22399561-22399681 1.0000 120 chr2L:10424079-10424199 1.0000 120 chr3R:13466270-13466390 1.0000 120 chr2R:16096441-16096561 1.0000 120 chrX:13347612-13347732 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_gcm/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/gcm.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.261 C 0.238 G 0.234 T 0.266 Background letter frequencies (from file dataset with add-one prior applied): A 0.261 C 0.238 G 0.234 T 0.266 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ATGCGGGY MEME-1 width = 8 sites = 116 llr = 1021 E-value = 8.0e-111 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 Description -------------------------------------------------------------------------------- Simplified A 8::::::: pos.-specific C 1::8:::5 probability G 1:a19aa: matrix T :a:11::5 bits 2.1 ** 1.9 ** ** 1.7 ** ** 1.5 ** *** Relative 1.3 ******* Entropy 1.0 ******* (12.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATGCGGGC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:13347612-13347732 107 1.18e-05 gtgtgggtgc atgcgggc tcgagt chr3R:23385034-23385154 83 1.18e-05 CACTCACACA ATGCGGGC GAATGAGCGG chr3R:14751185-14751305 39 1.18e-05 TGGCATTTCC ATGCGGGC TCTCTTGTTT chrX:18905504-18905624 75 1.18e-05 TTGTCTTGTC ATGCGGGC CTCACAAATG chr2R:23174685-23174805 58 1.18e-05 TAAAGAGGAA ATGCGGGC GAGAACTCAG chr3R:21237280-21237400 68 1.18e-05 ACATACCCAT ATGCGGGC GCTCAGTGTG chr3L:10906827-10906947 91 1.18e-05 ACAGAGTGAC ATGCGGGC GCAGCAACGG chr3L:15767914-15768034 77 1.18e-05 CACGCGAAGC ATGCGGGC CTTGattgaa chr3L:22344819-22344939 73 1.18e-05 CGGTAGCATA ATGCGGGC CATCTGTATG chr2L:505193-505313 107 1.18e-05 TTTGGAATCA ATGCGGGC TTGAGT chr2L:19146124-19146244 65 1.18e-05 TTTGTATGCC ATGCGGGC GCCCCTTTAG chr3R:21889054-21889174 48 1.18e-05 TGATCCGCCG ATGCGGGC GGCTATGGGT chr3R:5036196-5036316 44 1.18e-05 AAAATCACAT ATGCGGGC GTTTTGTTCG chr3L:14664565-14664685 61 1.18e-05 AGAGACGATG ATGCGGGC ATCGAGTTAC chr2R:19881830-19881950 58 1.18e-05 AGAGCGGAAA ATGCGGGC ACATTGACAG chr2L:3664802-3664922 88 1.18e-05 TTTCCTCCCC ATGCGGGC GCCCCGAAGA chr3R:23309941-23310061 69 1.18e-05 ATTTCCGTAG ATGCGGGC CAAGCAGGGA chrX:2595239-2595359 56 1.18e-05 TTCACAAGTT ATGCGGGC TTTATGGAAA chr2L:8833151-8833271 104 1.18e-05 TATATAAACT ATGCGGGC TGGCTTAGT chr2R:12461082-12461202 55 1.18e-05 GGTTCCTGGG ATGCGGGC TCTCATTAGT chr2L:4354018-4354138 62 1.18e-05 GCTCTAATTT ATGCGGGC CGGTGGAGCT chr3L:18631242-18631362 88 1.18e-05 GGCAAAAGTT ATGCGGGC AGCAAGGGAG chr3R:16352932-16353052 86 1.18e-05 CATCCATTGG ATGCGGGC ACTTGTGTAT chr3R:21864655-21864775 45 1.18e-05 AATCATAATT ATGCGGGC TCATCGATGA chr3L:2391070-2391190 15 1.18e-05 TCGTTCGTTC ATGCGGGC TTACATTTGT chr2R:23585558-23585678 84 1.18e-05 ATGTGTTTGC ATGCGGGC AGGCCTAGGG chr3R:5093889-5094009 57 1.18e-05 GTTGCCACCG ATGCGGGC GCAATATATT chr2R:19257328-19257448 76 1.18e-05 ATTGACCAAG ATGCGGGC GCAGCCAGTT chr2R:17009661-17009781 72 1.18e-05 GATGTACATG ATGCGGGC GCAGATGAGC chr2R:19494879-19494999 42 1.18e-05 TGATTCTGAT ATGCGGGC GGCGGTTGAG chrX:1231338-1231458 31 1.18e-05 TGCCCATCTG ATGCGGGC ACATCTCCCT chr3L:5781478-5781598 38 1.18e-05 GTTGTGCTTC ATGCGGGC TGGTTCTCTC chrX:6611229-6611349 69 1.18e-05 ATCAACTGGG ATGCGGGC GGTCTGATGA chr2L:1450181-1450301 88 1.18e-05 TGGAGTTCAG ATGCGGGC TGGATTAGCG chrX:2399628-2399748 51 2.50e-05 TGGTCTAACG ATGCGGGT GAGCACAGCT chr3R:7122743-7122863 75 2.50e-05 taataaCGGC ATGCGGGT GCTGTTTCTG chr2R:17401197-17401317 50 2.50e-05 GGCGCCTGCC ATGCGGGT TGTCACGCGG chr3L:9897851-9897971 38 2.50e-05 GGCTGATTGG ATGCGGGT TGAATGCCCG chr2L:3843758-3843878 92 2.50e-05 aggatggagc atgcgGGT CTCTGGGGTC chr2R:8638553-8638673 80 2.50e-05 ATGACATCGC ATGCGGGT GGCCGTGACT chr3R:7103015-7103135 48 2.50e-05 CAAATGATGC ATGCGGGT GGATGACAGA chr2R:20859911-20860031 72 2.50e-05 ACATTGCCAC ATGCGGGT CAGGATGGGG chr2L:18507112-18507232 27 2.50e-05 GTTTTTCCCG ATGCGGGT TCGGATCGAA chr2L:21322287-21322407 81 2.50e-05 TGCGATCAAA ATGCGGGT CATTTCAATT chr3L:646543-646663 49 2.50e-05 TAGACGGGCC ATGCGGGT TCTGCCAGAA chr2R:22404500-22404620 81 2.50e-05 CCATTTACAT ATGCGGGT TCCATGGAAG chr2L:9608303-9608423 55 2.50e-05 TTGGCAAATT ATGCGGGT GGCTCGTCGC chrX:15541489-15541609 87 2.50e-05 AAAAAAAAAC ATGCGGGT GGGGCATTGC chr2L:8580334-8580454 85 2.50e-05 TGGGAATTCC ATGCGGGT GTTGTGCTGG chrX:7704275-7704395 17 2.50e-05 TTAATTTTTC ATGCGGGT GCCCCGCCCC chr3L:22121654-22121774 68 2.50e-05 ACAGAGAGTC ATGCGGGT GCTAATTGAA chr3L:10392563-10392683 63 2.50e-05 AAAAAAAAAA ATGCGGGT CCGGGTGGAA chr3L:15325573-15325693 13 2.50e-05 CCGTGTCTCC ATGCGGGT TCTTCCAAGA chr2L:3603223-3603343 92 2.50e-05 CAGACCCCTC ATGCGGGT TCCCCCCGGG chr2R:23089667-23089787 65 2.50e-05 AAATTAACAC ATGCGGGT GAAATAACAC chr2R:9109071-9109191 75 2.50e-05 GCCGAAGCTG ATGCGGGT GCACAGTCTC chr2R:18414860-18414980 29 2.50e-05 TCGCAGCCAA ATGCGGGT CCTCGGAGGT chr3L:1730010-1730130 90 2.50e-05 AATCCACAAG ATGCGGGT TTCCAGGGAG chrX:12079409-12079529 49 2.50e-05 AGTTCAATGC ATGCGGGT GGCCCAACGC chrX:18780144-18780264 44 2.50e-05 GTAATTTAAT ATGCGGGT ATGTTCCAGT chrX:18560723-18560843 92 2.50e-05 TCAAACAACA ATGCGGGT CGATGATTGC chr3R:14801294-14801414 76 3.84e-05 TATGGTTTTT ATGCTGGC GAATATGTTC chr2L:19247340-19247460 54 3.84e-05 GTGGGGAATA ATGCTGGC GGCACTTTGC chr3R:19625383-19625503 40 3.84e-05 TACGAAATAT ATGCTGGC TGGGTGCCGG chr3L:9054378-9054498 5 3.84e-05 AACA ATGCTGGC TGTGACATGA chr3R:14492420-14492540 72 3.84e-05 ATTCAAGGGC ATGCTGGC ACTGCTGCCG chr3L:9092517-9092637 99 6.39e-05 AGCTCGCATT GTGCGGGC GTTGCACGCG chr2L:14540821-14540941 95 6.39e-05 CAGTATATTT GTGCGGGC ATTCGGGAGA chr3L:14287711-14287831 39 6.39e-05 CAACGATGAT ATGCTGGT TTCAAGTGCT chr2R:11552221-11552341 67 6.39e-05 ATTGAAAGCC GTGCGGGC GATAAATACG chr2L:5430830-5430950 48 6.39e-05 ACAAAGGGAA ATGCTGGT TCTGCTTAGC chr2R:22398421-22398541 94 6.39e-05 GTTCCAAATT GTGCGGGC GCACTGCCAA chr3R:16258457-16258577 77 6.39e-05 GCGGCAGCGG GTGCGGGC AGCTTCGCCA chr3L:20783974-20784094 19 6.39e-05 TCAggtgatg atgctggt gctgttgctg chr3L:17455649-17455769 56 6.39e-05 GGGGTGTTAT ATGCTGGT CCAACGCCTT chr3R:19470717-19470837 29 6.39e-05 AGTGTCGGAC ATGCTGGT GTCTGCTAGC chrX:8524250-8524370 20 6.39e-05 TTATGTCGAA ATGCTGGT AGCAATGCCC chr2R:20590007-20590127 103 6.39e-05 TAACTCTGCT ATGCTGGT TGGTTACCCA chr2L:7131904-7132024 98 7.47e-05 GTGGCAAATT CTGCGGGC ACAAGTACAA chr3L:371390-371510 2 7.47e-05 G CTGCGGGC TATCGCGCCT chr2L:9589060-9589180 24 7.47e-05 TCTAAAAAAT CTGCGGGC GTAGGATCCG chr3L:7326814-7326934 43 7.47e-05 ATAATCCGAT CTGCGGGC GCCGTTCGCC chr2L:3295843-3295963 97 7.47e-05 TCCAGCGGAA CTGCGGGC GATAGAATGA chr2R:19818121-19818241 91 8.65e-05 TGCACATTAT GTGCGGGT GCACGTTTCC chr3L:3386711-3386831 50 8.65e-05 GAGTATCTTG GTGCGGGT GCCGCGATTG chr2L:8546838-8546958 106 8.65e-05 TCAGTTAAAT GTGCGGGT GCTGAGC chr3R:17950655-17950775 104 8.65e-05 GGGCATCGGT GTGCGGGT CTGGTTTGT chr3L:3126589-3126709 45 1.10e-04 GTATATACAT CTGCGGGT GCGTGTCTAT chrX:4606573-4606693 97 1.10e-04 CGTTTGATAA ATGGGGGC GCGCACATTA chr3R:29558419-29558539 53 1.10e-04 CGGACGCGAG CTGCGGGT GCTCCATCAT chr2L:19388193-19388313 99 1.10e-04 TGCTCGTCGT CTGCGGGT CGGAGCCGTT chr3R:4242648-4242768 96 1.10e-04 ACTAAAACTT CTGCGGGT CGGTTAATCC chr2L:21029298-21029418 89 1.10e-04 ATGGAAGAAT ATGGGGGC TCGATCCACT chr3L:10520921-10521041 71 1.36e-04 TTTGTACTAT ATGTGGGC AAAGTTATGT chr3R:5098117-5098237 87 1.36e-04 CCTGAGTCAC ATGTGGGC CTCCCCTCTC chr3L:12298304-12298424 66 1.36e-04 GAACTGCAAA ATGGGGGT CAGGCGCTAA chr3L:109023-109143 31 1.36e-04 CAATGCAGCA ATGGGGGT CGAGGTTGGG chr3L:743407-743527 86 1.36e-04 CGAAAGATTT ATGTGGGC ATCTGGGATT chr2R:7478167-7478287 93 1.36e-04 CGTCGCATGT ATGTGGGC TCTATGGAGA chr2L:21776601-21776721 17 1.36e-04 TAGGGCTTAT ATGGGGGT GGGCCATACC chr3R:30763521-30763641 107 1.51e-04 ACTCTATTTT ATGTGGGT ACCAGC chr2L:8616231-8616351 60 1.51e-04 ATTGCAAATG ATGTGGGT GGAATGGGTG chr2L:8311878-8311998 36 1.51e-04 CGAATGCATT ATGTGGGT GGTTCACAGC chr2R:24881939-24882059 79 1.64e-04 AGGAATGAAG ATGCGGGA GCATCTCTGG chr3R:27556735-27556855 99 1.64e-04 TTAAACATTT ATGCGGGA CACCAGCAAA chr3L:13231319-13231439 94 1.64e-04 AACTCAAGAG ATGCGGGA GCTGGCATCC chr3R:29217448-29217568 14 1.77e-04 CTACCGAAAA ATGAGGGC GTGTTGCAAG chr2L:6553925-6554045 99 1.91e-04 GGCGTGCTCC ATGAGGGT TTTCCCGGAA chr3L:19037865-19037985 6 1.91e-04 AGGCA ATGAGGGT CCATTGTTAT chr2R:14968405-14968525 103 2.15e-04 CAATAACGAA GTGCTGGC CGAGTGGAGT chr3L:14816621-14816741 46 2.15e-04 TGGTTGCACG ATGCGGGG CACAGTGGTT chr3L:9716555-9716675 74 2.40e-04 AGCGGATTTA ATACGGGC CCAGATAGTA chr2L:14477699-14477819 29 2.95e-04 gatgatggtg atggtggc gatggtagtg chr3R:20889205-20889325 39 2.95e-04 TTGAGGAAGA ATACGGGT ACCCCTTTTA chr3R:16376306-16376426 103 3.35e-04 gatggtgatg atggtggt gatgatgcga chr3R:5062334-5062454 28 3.35e-04 AGATACCATC ATGGTGGT ACCATCATAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:13347612-13347732 1.2e-05 106_[+1]_6 chr3R:23385034-23385154 1.2e-05 82_[+1]_30 chr3R:14751185-14751305 1.2e-05 38_[+1]_74 chrX:18905504-18905624 1.2e-05 74_[+1]_38 chr2R:23174685-23174805 1.2e-05 57_[+1]_55 chr3R:21237280-21237400 1.2e-05 67_[+1]_45 chr3L:10906827-10906947 1.2e-05 90_[+1]_22 chr3L:15767914-15768034 1.2e-05 76_[+1]_36 chr3L:22344819-22344939 1.2e-05 72_[+1]_40 chr2L:505193-505313 1.2e-05 106_[+1]_6 chr2L:19146124-19146244 1.2e-05 64_[+1]_48 chr3R:21889054-21889174 1.2e-05 47_[+1]_65 chr3R:5036196-5036316 1.2e-05 43_[+1]_69 chr3L:14664565-14664685 1.2e-05 60_[+1]_52 chr2R:19881830-19881950 1.2e-05 57_[+1]_55 chr2L:3664802-3664922 1.2e-05 87_[+1]_25 chr3R:23309941-23310061 1.2e-05 68_[+1]_44 chrX:2595239-2595359 1.2e-05 55_[+1]_57 chr2L:8833151-8833271 1.2e-05 103_[+1]_9 chr2R:12461082-12461202 1.2e-05 54_[+1]_58 chr2L:4354018-4354138 1.2e-05 61_[+1]_51 chr3L:18631242-18631362 1.2e-05 87_[+1]_25 chr3R:16352932-16353052 1.2e-05 85_[+1]_27 chr3R:21864655-21864775 1.2e-05 44_[+1]_68 chr3L:2391070-2391190 1.2e-05 14_[+1]_98 chr2R:23585558-23585678 1.2e-05 83_[+1]_29 chr3R:5093889-5094009 1.2e-05 56_[+1]_56 chr2R:19257328-19257448 1.2e-05 75_[+1]_37 chr2R:17009661-17009781 1.2e-05 71_[+1]_41 chr2R:19494879-19494999 1.2e-05 41_[+1]_71 chrX:1231338-1231458 1.2e-05 30_[+1]_82 chr3L:5781478-5781598 1.2e-05 37_[+1]_75 chrX:6611229-6611349 1.2e-05 68_[+1]_44 chr2L:1450181-1450301 1.2e-05 87_[+1]_25 chrX:2399628-2399748 2.5e-05 50_[+1]_62 chr3R:7122743-7122863 2.5e-05 74_[+1]_38 chr2R:17401197-17401317 2.5e-05 49_[+1]_63 chr3L:9897851-9897971 2.5e-05 37_[+1]_75 chr2L:3843758-3843878 2.5e-05 91_[+1]_21 chr2R:8638553-8638673 2.5e-05 79_[+1]_33 chr3R:7103015-7103135 2.5e-05 47_[+1]_65 chr2R:20859911-20860031 2.5e-05 71_[+1]_41 chr2L:18507112-18507232 2.5e-05 26_[+1]_86 chr2L:21322287-21322407 2.5e-05 80_[+1]_32 chr3L:646543-646663 2.5e-05 48_[+1]_64 chr2R:22404500-22404620 2.5e-05 80_[+1]_32 chr2L:9608303-9608423 2.5e-05 54_[+1]_58 chrX:15541489-15541609 2.5e-05 86_[+1]_26 chr2L:8580334-8580454 2.5e-05 84_[+1]_28 chrX:7704275-7704395 2.5e-05 16_[+1]_96 chr3L:22121654-22121774 2.5e-05 67_[+1]_45 chr3L:10392563-10392683 2.5e-05 62_[+1]_50 chr3L:15325573-15325693 2.5e-05 12_[+1]_100 chr2L:3603223-3603343 2.5e-05 91_[+1]_21 chr2R:23089667-23089787 2.5e-05 64_[+1]_48 chr2R:9109071-9109191 2.5e-05 74_[+1]_38 chr2R:18414860-18414980 2.5e-05 28_[+1]_84 chr3L:1730010-1730130 2.5e-05 89_[+1]_23 chrX:12079409-12079529 2.5e-05 48_[+1]_64 chrX:18780144-18780264 2.5e-05 43_[+1]_69 chrX:18560723-18560843 2.5e-05 91_[+1]_21 chr3R:14801294-14801414 3.8e-05 75_[+1]_37 chr2L:19247340-19247460 3.8e-05 53_[+1]_59 chr3R:19625383-19625503 3.8e-05 39_[+1]_73 chr3L:9054378-9054498 3.8e-05 4_[+1]_108 chr3R:14492420-14492540 3.8e-05 71_[+1]_41 chr3L:9092517-9092637 6.4e-05 98_[+1]_14 chr2L:14540821-14540941 6.4e-05 94_[+1]_18 chr3L:14287711-14287831 6.4e-05 38_[+1]_74 chr2R:11552221-11552341 6.4e-05 66_[+1]_46 chr2L:5430830-5430950 6.4e-05 47_[+1]_65 chr2R:22398421-22398541 6.4e-05 93_[+1]_19 chr3R:16258457-16258577 6.4e-05 76_[+1]_36 chr3L:20783974-20784094 6.4e-05 18_[+1]_94 chr3L:17455649-17455769 6.4e-05 55_[+1]_57 chr3R:19470717-19470837 6.4e-05 28_[+1]_84 chrX:8524250-8524370 6.4e-05 19_[+1]_93 chr2R:20590007-20590127 6.4e-05 102_[+1]_10 chr2L:7131904-7132024 7.5e-05 97_[+1]_15 chr3L:371390-371510 7.5e-05 1_[+1]_111 chr2L:9589060-9589180 7.5e-05 23_[+1]_89 chr3L:7326814-7326934 7.5e-05 42_[+1]_70 chr2L:3295843-3295963 7.5e-05 96_[+1]_16 chr2R:19818121-19818241 8.6e-05 90_[+1]_22 chr3L:3386711-3386831 8.6e-05 49_[+1]_63 chr2L:8546838-8546958 8.6e-05 105_[+1]_7 chr3R:17950655-17950775 8.6e-05 103_[+1]_9 chr3L:3126589-3126709 0.00011 44_[+1]_68 chrX:4606573-4606693 0.00011 96_[+1]_16 chr3R:29558419-29558539 0.00011 52_[+1]_60 chr2L:19388193-19388313 0.00011 98_[+1]_14 chr3R:4242648-4242768 0.00011 95_[+1]_17 chr2L:21029298-21029418 0.00011 88_[+1]_24 chr3L:10520921-10521041 0.00014 70_[+1]_42 chr3R:5098117-5098237 0.00014 86_[+1]_26 chr3L:12298304-12298424 0.00014 65_[+1]_47 chr3L:109023-109143 0.00014 30_[+1]_82 chr3L:743407-743527 0.00014 85_[+1]_27 chr2R:7478167-7478287 0.00014 92_[+1]_20 chr2L:21776601-21776721 0.00014 16_[+1]_96 chr3R:30763521-30763641 0.00015 106_[+1]_6 chr2L:8616231-8616351 0.00015 59_[+1]_53 chr2L:8311878-8311998 0.00015 35_[+1]_77 chr2R:24881939-24882059 0.00016 78_[+1]_34 chr3R:27556735-27556855 0.00016 98_[+1]_14 chr3L:13231319-13231439 0.00016 93_[+1]_19 chr3R:29217448-29217568 0.00018 13_[+1]_99 chr2L:6553925-6554045 0.00019 98_[+1]_14 chr3L:19037865-19037985 0.00019 5_[+1]_107 chr2R:14968405-14968525 0.00021 102_[+1]_10 chr3L:14816621-14816741 0.00021 45_[+1]_67 chr3L:9716555-9716675 0.00024 73_[+1]_39 chr2L:14477699-14477819 0.0003 28_[+1]_84 chr3R:20889205-20889325 0.0003 38_[+1]_74 chr3R:16376306-16376426 0.00034 102_[+1]_10 chr3R:5062334-5062454 0.00034 27_[+1]_85 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGCGGGY width=8 seqs=116 chrX:13347612-13347732 ( 107) ATGCGGGC 1 chr3R:23385034-23385154 ( 83) ATGCGGGC 1 chr3R:14751185-14751305 ( 39) ATGCGGGC 1 chrX:18905504-18905624 ( 75) ATGCGGGC 1 chr2R:23174685-23174805 ( 58) ATGCGGGC 1 chr3R:21237280-21237400 ( 68) ATGCGGGC 1 chr3L:10906827-10906947 ( 91) ATGCGGGC 1 chr3L:15767914-15768034 ( 77) ATGCGGGC 1 chr3L:22344819-22344939 ( 73) ATGCGGGC 1 chr2L:505193-505313 ( 107) ATGCGGGC 1 chr2L:19146124-19146244 ( 65) ATGCGGGC 1 chr3R:21889054-21889174 ( 48) ATGCGGGC 1 chr3R:5036196-5036316 ( 44) ATGCGGGC 1 chr3L:14664565-14664685 ( 61) ATGCGGGC 1 chr2R:19881830-19881950 ( 58) ATGCGGGC 1 chr2L:3664802-3664922 ( 88) ATGCGGGC 1 chr3R:23309941-23310061 ( 69) ATGCGGGC 1 chrX:2595239-2595359 ( 56) ATGCGGGC 1 chr2L:8833151-8833271 ( 104) ATGCGGGC 1 chr2R:12461082-12461202 ( 55) ATGCGGGC 1 chr2L:4354018-4354138 ( 62) ATGCGGGC 1 chr3L:18631242-18631362 ( 88) ATGCGGGC 1 chr3R:16352932-16353052 ( 86) ATGCGGGC 1 chr3R:21864655-21864775 ( 45) ATGCGGGC 1 chr3L:2391070-2391190 ( 15) ATGCGGGC 1 chr2R:23585558-23585678 ( 84) ATGCGGGC 1 chr3R:5093889-5094009 ( 57) ATGCGGGC 1 chr2R:19257328-19257448 ( 76) ATGCGGGC 1 chr2R:17009661-17009781 ( 72) ATGCGGGC 1 chr2R:19494879-19494999 ( 42) ATGCGGGC 1 chrX:1231338-1231458 ( 31) ATGCGGGC 1 chr3L:5781478-5781598 ( 38) ATGCGGGC 1 chrX:6611229-6611349 ( 69) ATGCGGGC 1 chr2L:1450181-1450301 ( 88) ATGCGGGC 1 chrX:2399628-2399748 ( 51) ATGCGGGT 1 chr3R:7122743-7122863 ( 75) ATGCGGGT 1 chr2R:17401197-17401317 ( 50) ATGCGGGT 1 chr3L:9897851-9897971 ( 38) ATGCGGGT 1 chr2L:3843758-3843878 ( 92) ATGCGGGT 1 chr2R:8638553-8638673 ( 80) ATGCGGGT 1 chr3R:7103015-7103135 ( 48) ATGCGGGT 1 chr2R:20859911-20860031 ( 72) ATGCGGGT 1 chr2L:18507112-18507232 ( 27) ATGCGGGT 1 chr2L:21322287-21322407 ( 81) ATGCGGGT 1 chr3L:646543-646663 ( 49) ATGCGGGT 1 chr2R:22404500-22404620 ( 81) ATGCGGGT 1 chr2L:9608303-9608423 ( 55) ATGCGGGT 1 chrX:15541489-15541609 ( 87) ATGCGGGT 1 chr2L:8580334-8580454 ( 85) ATGCGGGT 1 chrX:7704275-7704395 ( 17) ATGCGGGT 1 chr3L:22121654-22121774 ( 68) ATGCGGGT 1 chr3L:10392563-10392683 ( 63) ATGCGGGT 1 chr3L:15325573-15325693 ( 13) ATGCGGGT 1 chr2L:3603223-3603343 ( 92) ATGCGGGT 1 chr2R:23089667-23089787 ( 65) ATGCGGGT 1 chr2R:9109071-9109191 ( 75) ATGCGGGT 1 chr2R:18414860-18414980 ( 29) ATGCGGGT 1 chr3L:1730010-1730130 ( 90) ATGCGGGT 1 chrX:12079409-12079529 ( 49) ATGCGGGT 1 chrX:18780144-18780264 ( 44) ATGCGGGT 1 chrX:18560723-18560843 ( 92) ATGCGGGT 1 chr3R:14801294-14801414 ( 76) ATGCTGGC 1 chr2L:19247340-19247460 ( 54) ATGCTGGC 1 chr3R:19625383-19625503 ( 40) ATGCTGGC 1 chr3L:9054378-9054498 ( 5) ATGCTGGC 1 chr3R:14492420-14492540 ( 72) ATGCTGGC 1 chr3L:9092517-9092637 ( 99) GTGCGGGC 1 chr2L:14540821-14540941 ( 95) GTGCGGGC 1 chr3L:14287711-14287831 ( 39) ATGCTGGT 1 chr2R:11552221-11552341 ( 67) GTGCGGGC 1 chr2L:5430830-5430950 ( 48) ATGCTGGT 1 chr2R:22398421-22398541 ( 94) GTGCGGGC 1 chr3R:16258457-16258577 ( 77) GTGCGGGC 1 chr3L:20783974-20784094 ( 19) ATGCTGGT 1 chr3L:17455649-17455769 ( 56) ATGCTGGT 1 chr3R:19470717-19470837 ( 29) ATGCTGGT 1 chrX:8524250-8524370 ( 20) ATGCTGGT 1 chr2R:20590007-20590127 ( 103) ATGCTGGT 1 chr2L:7131904-7132024 ( 98) CTGCGGGC 1 chr3L:371390-371510 ( 2) CTGCGGGC 1 chr2L:9589060-9589180 ( 24) CTGCGGGC 1 chr3L:7326814-7326934 ( 43) CTGCGGGC 1 chr2L:3295843-3295963 ( 97) CTGCGGGC 1 chr2R:19818121-19818241 ( 91) GTGCGGGT 1 chr3L:3386711-3386831 ( 50) GTGCGGGT 1 chr2L:8546838-8546958 ( 106) GTGCGGGT 1 chr3R:17950655-17950775 ( 104) GTGCGGGT 1 chr3L:3126589-3126709 ( 45) CTGCGGGT 1 chrX:4606573-4606693 ( 97) ATGGGGGC 1 chr3R:29558419-29558539 ( 53) CTGCGGGT 1 chr2L:19388193-19388313 ( 99) CTGCGGGT 1 chr3R:4242648-4242768 ( 96) CTGCGGGT 1 chr2L:21029298-21029418 ( 89) ATGGGGGC 1 chr3L:10520921-10521041 ( 71) ATGTGGGC 1 chr3R:5098117-5098237 ( 87) ATGTGGGC 1 chr3L:12298304-12298424 ( 66) ATGGGGGT 1 chr3L:109023-109143 ( 31) ATGGGGGT 1 chr3L:743407-743527 ( 86) ATGTGGGC 1 chr2R:7478167-7478287 ( 93) ATGTGGGC 1 chr2L:21776601-21776721 ( 17) ATGGGGGT 1 chr3R:30763521-30763641 ( 107) ATGTGGGT 1 chr2L:8616231-8616351 ( 60) ATGTGGGT 1 chr2L:8311878-8311998 ( 36) ATGTGGGT 1 chr2R:24881939-24882059 ( 79) ATGCGGGA 1 chr3R:27556735-27556855 ( 99) ATGCGGGA 1 chr3L:13231319-13231439 ( 94) ATGCGGGA 1 chr3R:29217448-29217568 ( 14) ATGAGGGC 1 chr2L:6553925-6554045 ( 99) ATGAGGGT 1 chr3L:19037865-19037985 ( 6) ATGAGGGT 1 chr2R:14968405-14968525 ( 103) GTGCTGGC 1 chr3L:14816621-14816741 ( 46) ATGCGGGG 1 chr3L:9716555-9716675 ( 74) ATACGGGC 1 chr2L:14477699-14477819 ( 29) ATGGTGGC 1 chr3R:20889205-20889325 ( 39) ATACGGGT 1 chr3R:16376306-16376426 ( 103) ATGGTGGT 1 chr3R:5062334-5062454 ( 28) ATGGTGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.17466 E= 8.0e-111 168 -162 -144 -1350 -1350 -1350 -1350 191 -392 -1350 207 -1350 -334 183 -176 -214 -1350 -1350 188 -95 -1350 -1350 209 -1350 -1350 -1350 209 -1350 -334 110 -476 78 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 116 E= 8.0e-111 0.836207 0.077586 0.086207 0.000000 0.000000 0.000000 0.000000 1.000000 0.017241 0.000000 0.982759 0.000000 0.025862 0.844828 0.068966 0.060345 0.000000 0.000000 0.862069 0.137931 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.025862 0.508621 0.008621 0.456897 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGCGGGY MEME-1 regular expression -------------------------------------------------------------------------------- ATGCGGG[CT] -------------------------------------------------------------------------------- Time 7.37 secs. ******************************************************************************** ******************************************************************************** MOTIF RCCCGCAT MEME-2 width = 8 sites = 105 llr = 953 E-value = 5.7e-106 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 5:::::a: pos.-specific C :aaa:a:: probability G 5:::9::: matrix T ::::1::9 bits 2.1 ** * 1.9 *** ** 1.7 *** ** 1.5 *** ** Relative 1.3 ****** Entropy 1.0 ******* (13.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCCCGCAT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:18228973-18229093 75 1.22e-05 ATTTAAACTT GCCCGCAT GTCACGACGA chr3L:10520921-10521041 106 1.22e-05 AGTCTGTACG GCCCGCAT CTAATTG chr3L:2392893-2393013 32 1.22e-05 CTCCAAAGAG GCCCGCAT ACCGAATACC chr2L:1395919-1396039 54 1.22e-05 ACCAGTAAGT GCCCGCAT CGCTCTCTCT chr3R:8127369-8127489 57 1.22e-05 TCAAATGTCT GCCCGCAT CTACGGGAAA chr2L:8171528-8171648 18 1.22e-05 AACACCAACA GCCCGCAT TTATTTTGTT chr3R:24620670-24620790 31 1.22e-05 CTCCGGCTAC GCCCGCAT CACCAGCTCC chr3R:23292396-23292516 47 1.22e-05 tgttattgct gcccgcat tcgaattgtt chr2R:6599490-6599610 24 1.22e-05 ACCCTCGCCC GCCCGCAT GCTCCATTAG chr2R:13334864-13334984 35 1.22e-05 TCCTGGCGAG GCCCGCAT AGCGGAAGCC chr2L:6187745-6187865 21 1.22e-05 TGCGGAACTG GCCCGCAT GTCTTTGGCT chr3L:19164455-19164575 68 1.22e-05 ACCTACACTC GCCCGCAT GTCTTGttaa chr3R:9129640-9129760 35 1.22e-05 AATAGCGCGC GCCCGCAT CCCCTTTTCG chr2R:15750299-15750419 44 1.22e-05 TAGTTGAAGA GCCCGCAT CTCGGTGGGT chr3R:10652100-10652220 109 1.22e-05 CGGGAAGATT GCCCGCAT GCGC chr2R:6961405-6961525 13 1.22e-05 AAATGCACTC GCCCGCAT CTGACAGCAG chr3L:12678248-12678368 32 1.22e-05 TGTTTGCACT GCCCGCAT GCGCTGATGG chr3R:16553932-16554052 55 1.22e-05 GGTTTGAGCA GCCCGCAT CATTACGAGT chr3L:20783974-20784094 70 1.22e-05 GCGTCGGACC GCCCGCAT GGCAGATGCC chr2R:24839211-24839331 25 1.22e-05 CTCGGGCCCA GCCCGCAT GAATATGTTT chr3R:19935930-19936050 66 1.22e-05 GAAATCCGAT GCCCGCAT AATTAAAGGA chrX:4589104-4589224 49 1.22e-05 AACGCGGGGA GCCCGCAT GATTTCATCA chr2L:7125509-7125629 56 1.22e-05 CTCTTCGACC GCCCGCAT ATTCAATCAG chrX:1372825-1372945 49 1.22e-05 aacaTGGGCG GCCCGCAT CCGCACCACA chr3L:15351898-15352018 9 1.22e-05 TCGCGACC GCCCGCAT TGCTCTATAA chr3R:21430936-21431056 40 1.22e-05 CGCGACCTCA GCCCGCAT TTTGTAAAAT chr3L:12404638-12404758 86 1.22e-05 CTGCCGCTGC GCCCGCAT AGAATCGCTC chr2R:8642422-8642542 51 1.22e-05 CAAAACTTCA GCCCGCAT TTCGGAGTCG chr2R:9109071-9109191 36 1.22e-05 GTCAAAGCCA GCCCGCAT GCAAGCCCTC chr3R:29573790-29573910 70 1.22e-05 ATGTCAAGTG GCCCGCAT AAGTGAGCAT chr2R:22691652-22691772 42 1.22e-05 TTTGTGGCCT GCCCGCAT CTCTTCCAGC chr3L:16966268-16966388 59 1.22e-05 CGCTCCGGGC GCCCGCAT AGCGAAAACC chrX:4544519-4544639 59 1.22e-05 AAGAATCAAT GCCCGCAT GCCAACAATT chr2L:18662194-18662314 49 1.22e-05 GCAGAAGTGA GCCCGCAT AATAATGCGG chr3R:8868537-8868657 43 1.22e-05 GTGTGGATTA GCCCGCAT TTCGAGTATT chr2R:20590007-20590127 39 1.22e-05 ATGTTGCGCT GCCCGCAT ATATACAAAG chr3R:19333536-19333656 39 1.22e-05 CAGATAATCA GCCCGCAT AAATACAAAT chr2L:3561870-3561990 67 1.22e-05 TATATATCCA GCCCGCAT GTTAGGCAAT chr3L:17382129-17382249 28 1.22e-05 ctgcagctTG GCCCGCAT CTTCTCGATG chr3R:16566609-16566729 30 2.58e-05 CCTCCACTCA ACCCGCAT GAGAAAAAAA chr2R:12924673-12924793 76 2.58e-05 ATCGCGTGCC ACCCGCAT GCTATTCATG chr3R:5701247-5701367 46 2.58e-05 TCTCGGCAGC ACCCGCAT ATATCTTCTT chr3R:29291249-29291369 64 2.58e-05 TGTCCGCTTA ACCCGCAT GTGTGCGCCA chr2R:11570728-11570848 47 2.58e-05 AGCAGCGGCA ACCCGCAT TTTTCAACCG chr3R:24846777-24846897 36 2.58e-05 TCACAGGGCA ACCCGCAT ATCGTCGATC chr2L:6553925-6554045 72 2.58e-05 TGTCGCCACG ACCCGCAT CACGATCGCG chr2L:848687-848807 61 2.58e-05 CAGCGGAGAA ACCCGCAT GCTGTCCAAT chr3R:30056378-30056498 43 2.58e-05 GCACGACATG ACCCGCAT ATCCATTGAG chrX:5893396-5893516 35 2.58e-05 TTTCGAATCA ACCCGCAT GCGAGTGAAA chrX:15065276-15065396 56 2.58e-05 ACAAGCACAC ACCCGCAT ATCTATAAAT chr4:506819-506939 100 2.58e-05 ACCCACACTC ACCCGCAT CTCGAAGTAC chr3L:10666855-10666975 44 2.58e-05 TACGACCCAG ACCCGCAT TTCTAgtagt chr3L:18350403-18350523 24 2.58e-05 TGATCCACCC ACCCGCAT AAAGTAAAAT chr3L:743407-743527 61 2.58e-05 cagaactcga acCCGCAT AGATGGCCGA chr2R:21231544-21231664 50 2.58e-05 ATACCCGCAT ACCCGCAT CTGTGCGCAA chr2L:7279956-7280076 49 2.58e-05 ATTATAATGG ACCCGCAT GCCAGTTTGC chrX:6610373-6610493 25 2.58e-05 GTGGTCATGA ACCCGCAT TGTAGTTGCC chrX:4517845-4517965 42 2.58e-05 CACGGGCACC ACCCGCAT GTGCACTGAG chr2R:6140097-6140217 36 2.58e-05 TCATTGGAGC ACCCGCAT CTTGTAATTC chr2R:6965200-6965320 50 2.58e-05 GTGGAAGGCA ACCCGCAT AAAAACTCGC chr2L:8616231-8616351 33 2.58e-05 AACTAAACGC ACCCGCAT TGTTATCGGA chr2R:9123047-9123167 64 2.58e-05 GGCTCTGCAG ACCCGCAT CCTGAGCTGC chr2L:14521975-14522095 54 2.58e-05 TGACAAATTC ACCCGCAT GTCTGTGACA chr3R:12006533-12006653 71 2.58e-05 cacccgcatc acccgcat cacccgcaGC chr3R:30032420-30032540 61 2.58e-05 TTCAAACACC ACCCGCAT ATGCATTGTA chr2L:16616421-16616541 54 2.58e-05 CGATGCCTGC ACCCGCAT CAAAATTGCT chr3R:16277772-16277892 45 4.74e-05 CTATAGAAAA GCCCGCAC ATATTTGCTC chr2R:9145693-9145813 58 4.74e-05 TCATCCTGGA GCCCGCAG TTTTTTTAAT chr3L:15779096-15779216 83 4.74e-05 GGTCCACTGG GCCCGCAC ATCCCACAAA chr3R:24920056-24920176 64 4.74e-05 AATTAACTTA GCCCGCAG CTCATGTCAT chr2L:3295843-3295963 36 4.74e-05 TACGTAATAC GCCCGCAG GGAATACCAG chrX:1231338-1231458 78 4.74e-05 GAAGGGCGCT GCCCGCAC TGCCATAAAA chr2R:16096441-16096561 6 6.13e-05 GGACC GCCCTCAT CGTTGGGCCA chr2L:21776601-21776721 52 6.13e-05 CGCGATTGTC GCCCTCAT CCGTCTAGCA chr3R:8786778-8786898 17 6.13e-05 CTCGTCGGGG GCCCTCAT CCGTGTAGGA chr2R:24881939-24882059 61 1.13e-04 GACATGGTGT ACCCGCAC AGGAATGAAG chr2L:8618694-8618814 1 1.13e-04 . GCCCACAT AATTGAGTGC chr2R:14968405-14968525 46 1.13e-04 TATGCAAAAC ACCCGCAG CTGATAAATA chr2R:17405506-17405626 11 1.13e-04 GGTTGCATAG ACCCGCAG CCACCACGAT chr2L:14387573-14387693 39 1.13e-04 AAACTCGCAG TCCCGCAT CCCTTATCCC chr2L:6182965-6183085 64 1.13e-04 GACGACGAAT TCCCGCAT GTGTGATCAC chr3L:723788-723908 85 1.13e-04 TCTACAGACG GCCCACAT ATGTAGGCGC chr3L:20286917-20287037 97 1.13e-04 TCCATTTCGA ACCCGCAC GTCCGAATAG chr3R:29217448-29217568 82 1.13e-04 TGGCCTGCTG TCCCGCAT GCTGCACATG chr3R:13464756-13464876 5 1.54e-04 ATTG ACCCTCAT TCGTTTTCCG chr3R:18236026-18236146 10 1.54e-04 GTCACACAC GCCAGCAT GAAACGCACA chr3L:11336240-11336360 30 1.54e-04 TGTAGAACCG ACCCTCAT AATGTGCACA chr2L:10562891-10563011 58 1.54e-04 GCCAATAATT ACCCTCAT CAAAATTTGT chr2R:7478167-7478287 67 1.54e-04 TTTCGACAAT GCCCGCAA CCCATTTGCG chrX:4606573-4606693 27 1.81e-04 TACTGGGGCG ACCCACAT CGTTTGGCCA chr3R:20297469-20297589 87 1.81e-04 ACGCAACAAC ACCCACAT ACCCATCCAC chr2R:21506382-21506502 58 1.81e-04 cagatccaaa acccacat acccaCATCG chr3R:19907900-19908020 47 2.22e-04 CCCAATCTCG CCCCGCAT CTAAGCGGAG chr3L:11381159-11381279 71 2.22e-04 CATTCTGAGT ACCCGCAA CCGAACCCGT chr3R:14466453-14466573 15 2.22e-04 TGAAGCAGCA ACCAGCAT ACGGTTGCCG chr3R:14711919-14712039 107 2.22e-04 tGTGTTGGGG CCCCGCAT TCCAGA chr3L:12298304-12298424 44 2.22e-04 GGCGATCCCG ACCCGCAA GTGTGAACTG chr2L:3831680-3831800 20 2.22e-04 TTGAGGAAGC ACCAGCAT AATCAGGCCA chr3R:19994669-19994789 13 2.22e-04 TTCACCAGCC ACCCGCAA CCCCTATAAC chr3R:19625383-19625503 59 2.22e-04 GGGTGCCGGT ACCAGCAT AAATGTTAGG chr3L:14816621-14816741 15 2.22e-04 CACAAGGGCC ACCAGCAT CTTCAGCTCG chr2R:21877365-21877485 74 2.36e-04 TCGATTATTA ACCCCCAT AAACAAGGCA chr2R:11552221-11552341 34 2.36e-04 ATGTATGTAT ACCCCCAT CTCAAAATTC chr2R:23911887-23912007 22 2.36e-04 TGTTCCATCT ACCCCCAT ATTGAAAGGC chr3R:22676233-22676353 53 2.36e-04 GAAGAAAAAG ACCCCCAT CAGGGGTAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:18228973-18229093 1.2e-05 74_[+2]_38 chr3L:10520921-10521041 1.2e-05 105_[+2]_7 chr3L:2392893-2393013 1.2e-05 31_[+2]_81 chr2L:1395919-1396039 1.2e-05 53_[+2]_59 chr3R:8127369-8127489 1.2e-05 56_[+2]_56 chr2L:8171528-8171648 1.2e-05 17_[+2]_95 chr3R:24620670-24620790 1.2e-05 30_[+2]_82 chr3R:23292396-23292516 1.2e-05 46_[+2]_66 chr2R:6599490-6599610 1.2e-05 23_[+2]_89 chr2R:13334864-13334984 1.2e-05 34_[+2]_78 chr2L:6187745-6187865 1.2e-05 20_[+2]_92 chr3L:19164455-19164575 1.2e-05 67_[+2]_45 chr3R:9129640-9129760 1.2e-05 34_[+2]_78 chr2R:15750299-15750419 1.2e-05 43_[+2]_69 chr3R:10652100-10652220 1.2e-05 108_[+2]_4 chr2R:6961405-6961525 1.2e-05 12_[+2]_100 chr3L:12678248-12678368 1.2e-05 31_[+2]_81 chr3R:16553932-16554052 1.2e-05 54_[+2]_58 chr3L:20783974-20784094 1.2e-05 69_[+2]_43 chr2R:24839211-24839331 1.2e-05 24_[+2]_88 chr3R:19935930-19936050 1.2e-05 65_[+2]_47 chrX:4589104-4589224 1.2e-05 48_[+2]_64 chr2L:7125509-7125629 1.2e-05 55_[+2]_57 chrX:1372825-1372945 1.2e-05 48_[+2]_64 chr3L:15351898-15352018 1.2e-05 8_[+2]_104 chr3R:21430936-21431056 1.2e-05 39_[+2]_73 chr3L:12404638-12404758 1.2e-05 85_[+2]_27 chr2R:8642422-8642542 1.2e-05 50_[+2]_62 chr2R:9109071-9109191 1.2e-05 35_[+2]_77 chr3R:29573790-29573910 1.2e-05 69_[+2]_43 chr2R:22691652-22691772 1.2e-05 41_[+2]_71 chr3L:16966268-16966388 1.2e-05 58_[+2]_54 chrX:4544519-4544639 1.2e-05 58_[+2]_54 chr2L:18662194-18662314 1.2e-05 48_[+2]_64 chr3R:8868537-8868657 1.2e-05 42_[+2]_70 chr2R:20590007-20590127 1.2e-05 38_[+2]_74 chr3R:19333536-19333656 1.2e-05 38_[+2]_74 chr2L:3561870-3561990 1.2e-05 66_[+2]_46 chr3L:17382129-17382249 1.2e-05 27_[+2]_85 chr3R:16566609-16566729 2.6e-05 29_[+2]_83 chr2R:12924673-12924793 2.6e-05 75_[+2]_37 chr3R:5701247-5701367 2.6e-05 45_[+2]_67 chr3R:29291249-29291369 2.6e-05 63_[+2]_49 chr2R:11570728-11570848 2.6e-05 46_[+2]_66 chr3R:24846777-24846897 2.6e-05 35_[+2]_77 chr2L:6553925-6554045 2.6e-05 71_[+2]_41 chr2L:848687-848807 2.6e-05 60_[+2]_52 chr3R:30056378-30056498 2.6e-05 42_[+2]_70 chrX:5893396-5893516 2.6e-05 34_[+2]_78 chrX:15065276-15065396 2.6e-05 55_[+2]_57 chr4:506819-506939 2.6e-05 99_[+2]_13 chr3L:10666855-10666975 2.6e-05 43_[+2]_69 chr3L:18350403-18350523 2.6e-05 23_[+2]_89 chr3L:743407-743527 2.6e-05 60_[+2]_52 chr2R:21231544-21231664 2.6e-05 49_[+2]_63 chr2L:7279956-7280076 2.6e-05 48_[+2]_64 chrX:6610373-6610493 2.6e-05 24_[+2]_88 chrX:4517845-4517965 2.6e-05 41_[+2]_71 chr2R:6140097-6140217 2.6e-05 35_[+2]_77 chr2R:6965200-6965320 2.6e-05 49_[+2]_63 chr2L:8616231-8616351 2.6e-05 32_[+2]_80 chr2R:9123047-9123167 2.6e-05 63_[+2]_49 chr2L:14521975-14522095 2.6e-05 53_[+2]_59 chr3R:12006533-12006653 2.6e-05 70_[+2]_42 chr3R:30032420-30032540 2.6e-05 60_[+2]_52 chr2L:16616421-16616541 2.6e-05 53_[+2]_59 chr3R:16277772-16277892 4.7e-05 44_[+2]_68 chr2R:9145693-9145813 4.7e-05 57_[+2]_55 chr3L:15779096-15779216 4.7e-05 82_[+2]_30 chr3R:24920056-24920176 4.7e-05 63_[+2]_49 chr2L:3295843-3295963 4.7e-05 35_[+2]_77 chrX:1231338-1231458 4.7e-05 77_[+2]_35 chr2R:16096441-16096561 6.1e-05 5_[+2]_107 chr2L:21776601-21776721 6.1e-05 51_[+2]_61 chr3R:8786778-8786898 6.1e-05 16_[+2]_96 chr2R:24881939-24882059 0.00011 60_[+2]_52 chr2L:8618694-8618814 0.00011 [+2]_112 chr2R:14968405-14968525 0.00011 45_[+2]_67 chr2R:17405506-17405626 0.00011 10_[+2]_102 chr2L:14387573-14387693 0.00011 38_[+2]_74 chr2L:6182965-6183085 0.00011 63_[+2]_49 chr3L:723788-723908 0.00011 84_[+2]_28 chr3L:20286917-20287037 0.00011 96_[+2]_16 chr3R:29217448-29217568 0.00011 81_[+2]_31 chr3R:13464756-13464876 0.00015 4_[+2]_108 chr3R:18236026-18236146 0.00015 9_[+2]_103 chr3L:11336240-11336360 0.00015 29_[+2]_83 chr2L:10562891-10563011 0.00015 57_[+2]_55 chr2R:7478167-7478287 0.00015 66_[+2]_46 chrX:4606573-4606693 0.00018 26_[+2]_86 chr3R:20297469-20297589 0.00018 86_[+2]_26 chr2R:21506382-21506502 0.00018 57_[+2]_55 chr3R:19907900-19908020 0.00022 46_[+2]_66 chr3L:11381159-11381279 0.00022 70_[+2]_42 chr3R:14466453-14466573 0.00022 14_[+2]_98 chr3R:14711919-14712039 0.00022 106_[+2]_6 chr3L:12298304-12298424 0.00022 43_[+2]_69 chr2L:3831680-3831800 0.00022 19_[+2]_93 chr3R:19994669-19994789 0.00022 12_[+2]_100 chr3R:19625383-19625503 0.00022 58_[+2]_54 chr3L:14816621-14816741 0.00022 14_[+2]_98 chr2R:21877365-21877485 0.00024 73_[+2]_39 chr2R:11552221-11552341 0.00024 33_[+2]_79 chr2R:23911887-23912007 0.00024 21_[+2]_91 chr3R:22676233-22676353 0.00024 52_[+2]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCCCGCAT width=8 seqs=105 chr3R:18228973-18229093 ( 75) GCCCGCAT 1 chr3L:10520921-10521041 ( 106) GCCCGCAT 1 chr3L:2392893-2393013 ( 32) GCCCGCAT 1 chr2L:1395919-1396039 ( 54) GCCCGCAT 1 chr3R:8127369-8127489 ( 57) GCCCGCAT 1 chr2L:8171528-8171648 ( 18) GCCCGCAT 1 chr3R:24620670-24620790 ( 31) GCCCGCAT 1 chr3R:23292396-23292516 ( 47) GCCCGCAT 1 chr2R:6599490-6599610 ( 24) GCCCGCAT 1 chr2R:13334864-13334984 ( 35) GCCCGCAT 1 chr2L:6187745-6187865 ( 21) GCCCGCAT 1 chr3L:19164455-19164575 ( 68) GCCCGCAT 1 chr3R:9129640-9129760 ( 35) GCCCGCAT 1 chr2R:15750299-15750419 ( 44) GCCCGCAT 1 chr3R:10652100-10652220 ( 109) GCCCGCAT 1 chr2R:6961405-6961525 ( 13) GCCCGCAT 1 chr3L:12678248-12678368 ( 32) GCCCGCAT 1 chr3R:16553932-16554052 ( 55) GCCCGCAT 1 chr3L:20783974-20784094 ( 70) GCCCGCAT 1 chr2R:24839211-24839331 ( 25) GCCCGCAT 1 chr3R:19935930-19936050 ( 66) GCCCGCAT 1 chrX:4589104-4589224 ( 49) GCCCGCAT 1 chr2L:7125509-7125629 ( 56) GCCCGCAT 1 chrX:1372825-1372945 ( 49) GCCCGCAT 1 chr3L:15351898-15352018 ( 9) GCCCGCAT 1 chr3R:21430936-21431056 ( 40) GCCCGCAT 1 chr3L:12404638-12404758 ( 86) GCCCGCAT 1 chr2R:8642422-8642542 ( 51) GCCCGCAT 1 chr2R:9109071-9109191 ( 36) GCCCGCAT 1 chr3R:29573790-29573910 ( 70) GCCCGCAT 1 chr2R:22691652-22691772 ( 42) GCCCGCAT 1 chr3L:16966268-16966388 ( 59) GCCCGCAT 1 chrX:4544519-4544639 ( 59) GCCCGCAT 1 chr2L:18662194-18662314 ( 49) GCCCGCAT 1 chr3R:8868537-8868657 ( 43) GCCCGCAT 1 chr2R:20590007-20590127 ( 39) GCCCGCAT 1 chr3R:19333536-19333656 ( 39) GCCCGCAT 1 chr2L:3561870-3561990 ( 67) GCCCGCAT 1 chr3L:17382129-17382249 ( 28) GCCCGCAT 1 chr3R:16566609-16566729 ( 30) ACCCGCAT 1 chr2R:12924673-12924793 ( 76) ACCCGCAT 1 chr3R:5701247-5701367 ( 46) ACCCGCAT 1 chr3R:29291249-29291369 ( 64) ACCCGCAT 1 chr2R:11570728-11570848 ( 47) ACCCGCAT 1 chr3R:24846777-24846897 ( 36) ACCCGCAT 1 chr2L:6553925-6554045 ( 72) ACCCGCAT 1 chr2L:848687-848807 ( 61) ACCCGCAT 1 chr3R:30056378-30056498 ( 43) ACCCGCAT 1 chrX:5893396-5893516 ( 35) ACCCGCAT 1 chrX:15065276-15065396 ( 56) ACCCGCAT 1 chr4:506819-506939 ( 100) ACCCGCAT 1 chr3L:10666855-10666975 ( 44) ACCCGCAT 1 chr3L:18350403-18350523 ( 24) ACCCGCAT 1 chr3L:743407-743527 ( 61) ACCCGCAT 1 chr2R:21231544-21231664 ( 50) ACCCGCAT 1 chr2L:7279956-7280076 ( 49) ACCCGCAT 1 chrX:6610373-6610493 ( 25) ACCCGCAT 1 chrX:4517845-4517965 ( 42) ACCCGCAT 1 chr2R:6140097-6140217 ( 36) ACCCGCAT 1 chr2R:6965200-6965320 ( 50) ACCCGCAT 1 chr2L:8616231-8616351 ( 33) ACCCGCAT 1 chr2R:9123047-9123167 ( 64) ACCCGCAT 1 chr2L:14521975-14522095 ( 54) ACCCGCAT 1 chr3R:12006533-12006653 ( 71) ACCCGCAT 1 chr3R:30032420-30032540 ( 61) ACCCGCAT 1 chr2L:16616421-16616541 ( 54) ACCCGCAT 1 chr3R:16277772-16277892 ( 45) GCCCGCAC 1 chr2R:9145693-9145813 ( 58) GCCCGCAG 1 chr3L:15779096-15779216 ( 83) GCCCGCAC 1 chr3R:24920056-24920176 ( 64) GCCCGCAG 1 chr2L:3295843-3295963 ( 36) GCCCGCAG 1 chrX:1231338-1231458 ( 78) GCCCGCAC 1 chr2R:16096441-16096561 ( 6) GCCCTCAT 1 chr2L:21776601-21776721 ( 52) GCCCTCAT 1 chr3R:8786778-8786898 ( 17) GCCCTCAT 1 chr2R:24881939-24882059 ( 61) ACCCGCAC 1 chr2L:8618694-8618814 ( 1) GCCCACAT 1 chr2R:14968405-14968525 ( 46) ACCCGCAG 1 chr2R:17405506-17405626 ( 11) ACCCGCAG 1 chr2L:14387573-14387693 ( 39) TCCCGCAT 1 chr2L:6182965-6183085 ( 64) TCCCGCAT 1 chr3L:723788-723908 ( 85) GCCCACAT 1 chr3L:20286917-20287037 ( 97) ACCCGCAC 1 chr3R:29217448-29217568 ( 82) TCCCGCAT 1 chr3R:13464756-13464876 ( 5) ACCCTCAT 1 chr3R:18236026-18236146 ( 10) GCCAGCAT 1 chr3L:11336240-11336360 ( 30) ACCCTCAT 1 chr2L:10562891-10563011 ( 58) ACCCTCAT 1 chr2R:7478167-7478287 ( 67) GCCCGCAA 1 chrX:4606573-4606693 ( 27) ACCCACAT 1 chr3R:20297469-20297589 ( 87) ACCCACAT 1 chr2R:21506382-21506502 ( 58) ACCCACAT 1 chr3R:19907900-19908020 ( 47) CCCCGCAT 1 chr3L:11381159-11381279 ( 71) ACCCGCAA 1 chr3R:14466453-14466573 ( 15) ACCAGCAT 1 chr3R:14711919-14712039 ( 107) CCCCGCAT 1 chr3L:12298304-12298424 ( 44) ACCCGCAA 1 chr2L:3831680-3831800 ( 20) ACCAGCAT 1 chr3R:19994669-19994789 ( 13) ACCCGCAA 1 chr3R:19625383-19625503 ( 59) ACCAGCAT 1 chr3L:14816621-14816741 ( 15) ACCAGCAT 1 chr2R:21877365-21877485 ( 74) ACCCCCAT 1 chr2R:11552221-11552341 ( 34) ACCCCCAT 1 chr2R:23911887-23912007 ( 22) ACCCCCAT 1 chr3R:22676233-22676353 ( 53) ACCCCCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.70528 E= 5.7e-106 81 -364 108 -322 -1336 207 -1336 -1336 -1336 207 -1336 -1336 -246 200 -1336 -1336 -246 -264 187 -222 -1336 207 -1336 -1336 194 -1336 -1336 -1336 -278 -232 -230 170 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 105 E= 5.7e-106 0.457143 0.019048 0.495238 0.028571 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.047619 0.952381 0.000000 0.000000 0.047619 0.038095 0.857143 0.057143 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.038095 0.047619 0.047619 0.866667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCCGCAT MEME-2 regular expression -------------------------------------------------------------------------------- [GA]CCCGCAT -------------------------------------------------------------------------------- Time 13.47 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGGMGGG MEME-3 width = 8 sites = 2 llr = 22 E-value = 2.1e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::5::: pos.-specific C ::::5::: probability G aaaa:aaa matrix T :::::::: bits 2.1 **** *** 1.9 **** *** 1.7 **** *** 1.5 **** *** Relative 1.3 **** *** Entropy 1.0 ******** (15.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGGGAGGG consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:17401197-17401317 66 9.14e-06 GTTGTCACGC GGGGCGGG GCTGTGGGCG chr2R:20859911-20860031 86 1.92e-05 GGGTCAGGAT GGGGAGGG GACACACATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:17401197-17401317 9.1e-06 65_[+3]_47 chr2R:20859911-20860031 1.9e-05 85_[+3]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGGMGGG width=8 seqs=2 chr2R:17401197-17401317 ( 66) GGGGCGGG 1 chr2R:20859911-20860031 ( 86) GGGGAGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.7859 E= 2.1e+005 -765 -765 209 -765 -765 -765 209 -765 -765 -765 209 -765 -765 -765 209 -765 93 107 -765 -765 -765 -765 209 -765 -765 -765 209 -765 -765 -765 209 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.1e+005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGMGGG MEME-3 regular expression -------------------------------------------------------------------------------- GGGG[AC]GGG -------------------------------------------------------------------------------- Time 19.41 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGGGAAG MEME-4 width = 8 sites = 2 llr = 23 E-value = 1.8e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::aa: pos.-specific C :::::::: probability G aaaaa::a matrix T :::::::: bits 2.1 ***** * 1.9 ******** 1.7 ******** 1.5 ******** Relative 1.3 ******** Entropy 1.0 ******** (16.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGGGGAAG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:10424079-10424199 46 1.12e-05 GATGGTGAAA GGGGGAAG GGGGTGCGAC chr2R:13334864-13334984 75 1.12e-05 CGTTGCAAAG GGGGGAAG CTCCAGTGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:10424079-10424199 1.1e-05 45_[+4]_67 chr2R:13334864-13334984 1.1e-05 74_[+4]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGGGAAG width=8 seqs=2 chr2L:10424079-10424199 ( 46) GGGGGAAG 1 chr2R:13334864-13334984 ( 75) GGGGGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.7859 E= 1.8e+005 -765 -765 209 -765 -765 -765 209 -765 -765 -765 209 -765 -765 -765 209 -765 -765 -765 209 -765 193 -765 -765 -765 193 -765 -765 -765 -765 -765 209 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.8e+005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGGAAG MEME-4 regular expression -------------------------------------------------------------------------------- GGGGGAAG -------------------------------------------------------------------------------- Time 25.33 secs. ******************************************************************************** ******************************************************************************** MOTIF GWTGATGG MEME-5 width = 8 sites = 12 llr = 119 E-value = 1.1e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :4::a::: pos.-specific C :2:::::: probability G a1:a::aa matrix T :3a::a:: bits 2.1 * * ** 1.9 * ****** 1.7 * ****** 1.5 * ****** Relative 1.3 * ****** Entropy 1.0 * ****** (14.3 bits) 0.8 * ****** 0.6 * ****** 0.4 * ****** 0.2 ******** 0.0 -------- Multilevel GATGATGG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:3386711-3386831 67 1.45e-05 TGCCGCGATT GATGATGG TACAGCTAGC chr3R:16376306-16376426 6 1.45e-05 ATGCG GATGATGG TACGTGAAGT chr2L:14477699-14477819 19 1.45e-05 ACAAgatgat gatgatgg tgatggtggc chr3L:12404638-12404758 53 1.45e-05 CCATGGGGTA GATGATGG TCTGTGAAAT chrX:6611229-6611349 82 1.45e-05 CGGGCGGTCT GATGATGG GCCTAATCAA chr3R:5036196-5036316 88 2.92e-05 TATGCATGAA GTTGATGG ATTACTTATG chrX:6610373-6610493 85 2.92e-05 CGCGCCAGCG GTTGATGG ATGATGTGGC chr2L:8616231-8616351 89 2.92e-05 TGGCTGGATG GTTGATGG TTGATTGGGG chr2R:17009661-17009781 96 2.92e-05 GAGCGGGCGT GTTGATGG TCGATTGATG chr2R:17401197-17401317 86 4.24e-05 TGTGGGCGGT GCTGATGG GGTGGTCGGG chr3L:12678248-12678368 42 4.24e-05 GCCCGCATGC GCTGATGG CTGCGTTTTC chr2L:3295843-3295963 17 5.53e-05 GGTCGGCTAG GGTGATGG CTACGTAATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:3386711-3386831 1.4e-05 66_[+5]_46 chr3R:16376306-16376426 1.4e-05 5_[+5]_107 chr2L:14477699-14477819 1.4e-05 18_[+5]_94 chr3L:12404638-12404758 1.4e-05 52_[+5]_60 chrX:6611229-6611349 1.4e-05 81_[+5]_31 chr3R:5036196-5036316 2.9e-05 87_[+5]_25 chrX:6610373-6610493 2.9e-05 84_[+5]_28 chr2L:8616231-8616351 2.9e-05 88_[+5]_24 chr2R:17009661-17009781 2.9e-05 95_[+5]_17 chr2R:17401197-17401317 4.2e-05 85_[+5]_27 chr3L:12678248-12678368 4.2e-05 41_[+5]_71 chr2L:3295843-3295963 5.5e-05 16_[+5]_96 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GWTGATGG width=8 seqs=12 chr3L:3386711-3386831 ( 67) GATGATGG 1 chr3R:16376306-16376426 ( 6) GATGATGG 1 chr2L:14477699-14477819 ( 19) GATGATGG 1 chr3L:12404638-12404758 ( 53) GATGATGG 1 chrX:6611229-6611349 ( 82) GATGATGG 1 chr3R:5036196-5036316 ( 88) GTTGATGG 1 chrX:6610373-6610493 ( 85) GTTGATGG 1 chr2L:8616231-8616351 ( 89) GTTGATGG 1 chr2R:17009661-17009781 ( 96) GTTGATGG 1 chr2R:17401197-17401317 ( 86) GCTGATGG 1 chr3L:12678248-12678368 ( 42) GCTGATGG 1 chr2L:3295843-3295963 ( 17) GGTGATGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.7858 E= 1.1e+005 -1023 -1023 209 -1023 67 -51 -149 32 -1023 -1023 -1023 191 -1023 -1023 209 -1023 193 -1023 -1023 -1023 -1023 -1023 -1023 191 -1023 -1023 209 -1023 -1023 -1023 209 -1023 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 1.1e+005 0.000000 0.000000 1.000000 0.000000 0.416667 0.166667 0.083333 0.333333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GWTGATGG MEME-5 regular expression -------------------------------------------------------------------------------- G[AT]TGATGG -------------------------------------------------------------------------------- Time 31.20 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:1450181-1450301 9.95e-03 87_[+1(1.18e-05)]_25 chrX:18560723-18560843 1.31e-02 91_[+1(2.50e-05)]_21 chr2L:16616421-16616541 7.26e-03 53_[+2(2.58e-05)]_59 chr3R:29217448-29217568 1.70e-02 120 chr3R:30032420-30032540 2.99e-01 60_[+2(2.58e-05)]_52 chr3L:17382129-17382249 1.67e-02 27_[+2(1.22e-05)]_85 chr2R:12462818-12462938 1.76e-01 120 chrX:6611229-6611349 4.34e-04 68_[+1(1.18e-05)]_5_[+5(1.45e-05)]_\ 31 chr2L:3561870-3561990 1.53e-01 66_[+2(1.22e-05)]_46 chr3L:5781478-5781598 1.52e-02 37_[+1(1.18e-05)]_75 chr3R:12006533-12006653 1.46e-01 61_[+2(2.58e-05)]_1_[+2(2.58e-05)]_\ 42 chrX:1231338-1231458 2.16e-04 30_[+1(1.18e-05)]_39_[+2(4.74e-05)]_\ 35 chr3R:22676233-22676353 2.69e-01 120 chr2R:19494879-19494999 3.38e-02 41_[+1(1.18e-05)]_71 chr2R:17009661-17009781 4.82e-04 71_[+1(1.18e-05)]_16_[+5(2.92e-05)]_\ 17 chr2L:14521975-14522095 7.10e-03 53_[+2(2.58e-05)]_59 chr2L:3295843-3295963 7.61e-05 16_[+5(5.53e-05)]_11_[+2(4.74e-05)]_\ 53_[+1(7.47e-05)]_16 chrX:18780144-18780264 1.77e-01 43_[+1(2.50e-05)]_69 chr3R:21021668-21021788 8.71e-01 120 chr3L:7326814-7326934 2.33e-01 42_[+1(7.47e-05)]_70 chr3R:19333536-19333656 3.26e-02 38_[+2(1.22e-05)]_74 chr2R:9123047-9123167 1.58e-01 63_[+2(2.58e-05)]_49 chr3R:24920056-24920176 2.40e-01 63_[+2(4.74e-05)]_49 chr3L:13231319-13231439 6.50e-02 120 chrX:12079409-12079529 4.04e-03 48_[+1(2.50e-05)]_64 chr2R:19257328-19257448 2.78e-03 75_[+1(1.18e-05)]_37 chr2R:20590007-20590127 4.31e-03 38_[+2(1.22e-05)]_56_[+1(6.39e-05)]_\ 10 chr3L:15779096-15779216 1.15e-02 82_[+2(4.74e-05)]_30 chr3R:5093889-5094009 2.96e-02 56_[+1(1.18e-05)]_56 chr2L:8311878-8311998 2.08e-01 120 chr3R:8868537-8868657 2.25e-02 42_[+2(1.22e-05)]_70 chr2R:23585558-23585678 1.20e-02 83_[+1(1.18e-05)]_29 chr3R:14492420-14492540 3.54e-02 71_[+1(3.84e-05)]_41 chr3R:8786778-8786898 1.89e-01 16_[+2(6.13e-05)]_96 chr3L:2391070-2391190 1.07e-02 14_[+1(1.18e-05)]_98 chr3R:21864655-21864775 5.32e-02 44_[+1(1.18e-05)]_68 chr3L:9054378-9054498 1.70e-02 4_[+1(3.84e-05)]_108 chr3R:19860564-19860684 1.05e-01 120 chr3L:1730010-1730130 1.82e-02 89_[+1(2.50e-05)]_23 chr3R:16352932-16353052 3.09e-02 85_[+1(1.18e-05)]_27 chr2R:18414860-18414980 8.99e-02 28_[+1(2.50e-05)]_43_[+1(7.47e-05)]_\ 33 chr3L:14816621-14816741 1.86e-02 120 chr3L:18631242-18631362 9.39e-04 87_[+1(1.18e-05)]_25 chr2L:8616231-8616351 1.60e-04 32_[+2(2.58e-05)]_48_[+5(2.92e-05)]_\ 24 chr2L:18662194-18662314 4.79e-02 48_[+2(1.22e-05)]_64 chr3R:9182658-9182778 3.76e-01 120 chr2R:6965200-6965320 1.56e-02 49_[+2(2.58e-05)]_63 chrX:4544519-4544639 9.54e-02 58_[+2(1.22e-05)]_54 chr2L:4354018-4354138 1.91e-02 61_[+1(1.18e-05)]_51 chr3R:30763521-30763641 3.43e-01 120 chr3R:23294670-23294790 8.27e-01 120 chr3L:16966268-16966388 2.87e-02 58_[+2(1.22e-05)]_54 chr2R:22691652-22691772 1.06e-01 41_[+2(1.22e-05)]_71 chr2R:14197806-14197926 4.14e-02 120 chr3R:29573790-29573910 6.77e-03 69_[+2(1.22e-05)]_43 chr3R:27109594-27109714 7.19e-01 120 chr2R:9109071-9109191 2.70e-04 35_[+2(1.22e-05)]_31_[+1(2.50e-05)]_\ 38 chr2R:6140097-6140217 1.12e-01 35_[+2(2.58e-05)]_77 chr3R:19625383-19625503 2.99e-04 39_[+1(3.84e-05)]_47_[+4(7.44e-05)]_\ 18 chr2L:21029298-21029418 9.25e-02 120 chr2R:8642422-8642542 7.71e-02 50_[+2(1.22e-05)]_62 chr2L:21776601-21776721 7.69e-06 19_[+3(3.84e-05)]_24_[+2(6.13e-05)]_\ 61 chr3R:10503947-10504067 8.97e-01 120 chr3L:12404638-12404758 8.09e-05 52_[+5(1.45e-05)]_25_[+2(1.22e-05)]_\ 27 chr3R:30772506-30772626 4.18e-01 120 chr2R:12461082-12461202 1.33e-02 54_[+1(1.18e-05)]_58 chr2L:8833151-8833271 4.29e-02 103_[+1(1.18e-05)]_9 chr3R:4242648-4242768 2.07e-01 120 chrX:8524250-8524370 1.02e-01 19_[+1(6.39e-05)]_93 chrX:2595239-2595359 1.13e-02 55_[+1(1.18e-05)]_57 chr3R:21430936-21431056 7.33e-02 39_[+2(1.22e-05)]_73 chr3R:17950655-17950775 2.85e-04 87_[+3(1.92e-05)]_8_[+1(8.65e-05)]_\ 9 chr3R:20889205-20889325 3.06e-01 120 chr3R:23309941-23310061 3.83e-03 68_[+1(1.18e-05)]_44 chrX:4517845-4517965 2.00e-01 41_[+2(2.58e-05)]_71 chr3L:15351898-15352018 1.91e-01 8_[+2(1.22e-05)]_104 chr2L:8832950-8833070 3.77e-01 120 chr3R:19470717-19470837 2.34e-01 28_[+1(6.39e-05)]_84 chrX:1372825-1372945 2.59e-02 48_[+2(1.22e-05)]_64 chr2L:3664802-3664922 6.16e-02 87_[+1(1.18e-05)]_25 chr2R:19881830-19881950 6.31e-02 57_[+1(1.18e-05)]_9_[+1(6.39e-05)]_\ 38 chrX:6610373-6610493 4.69e-03 24_[+2(2.58e-05)]_52_[+5(2.92e-05)]_\ 28 chr2L:7279956-7280076 7.05e-02 48_[+2(2.58e-05)]_64 chr3R:29299146-29299266 8.04e-01 120 chr3R:27556735-27556855 3.75e-02 120 chr3L:17455649-17455769 4.45e-02 55_[+1(6.39e-05)]_57 chr2R:23089667-23089787 6.64e-02 64_[+1(2.50e-05)]_48 chr4:662277-662397 2.36e-01 120 chr3R:18330586-18330706 7.10e-01 120 chr2L:7125509-7125629 2.48e-02 55_[+2(1.22e-05)]_57 chr2R:21506382-21506502 2.98e-02 120 chrX:4589104-4589224 6.46e-03 48_[+2(1.22e-05)]_64 chr2L:3603223-3603343 4.83e-03 91_[+1(2.50e-05)]_21 chr2R:19484309-19484429 1.22e-01 120 chr3R:19935930-19936050 5.15e-02 65_[+2(1.22e-05)]_47 chr3L:15325573-15325693 6.30e-02 12_[+1(2.50e-05)]_55_[+1(6.39e-05)]_\ 37 chr2R:24839211-24839331 9.78e-02 24_[+2(1.22e-05)]_88 chr3L:20783974-20784094 5.71e-05 18_[+1(6.39e-05)]_43_[+2(1.22e-05)]_\ 43 chr3R:5093097-5093217 3.91e-01 120 chr3L:10392563-10392683 6.57e-02 62_[+1(2.50e-05)]_50 chr3L:14664565-14664685 6.24e-03 60_[+1(1.18e-05)]_52 chr3R:29545851-29545971 8.15e-01 120 chr3R:16553932-16554052 1.16e-01 54_[+2(1.22e-05)]_58 chr2L:8986308-8986428 7.35e-01 120 chr2R:21231544-21231664 8.97e-02 41_[+2(2.58e-05)]_[+2(2.58e-05)]_63 chr2R:22078577-22078697 1.49e-02 120 chr3L:12678248-12678368 6.54e-04 31_[+2(1.22e-05)]_2_[+5(4.24e-05)]_\ 71 chr3L:22121654-22121774 2.27e-01 67_[+1(2.50e-05)]_45 chr3R:19994669-19994789 1.43e-01 120 chrX:7704275-7704395 1.01e-01 16_[+1(2.50e-05)]_96 chr2L:8580334-8580454 4.37e-02 84_[+1(2.50e-05)]_28 chr2R:6961405-6961525 5.56e-03 12_[+2(1.22e-05)]_100 chr2L:9589060-9589180 4.09e-02 23_[+1(7.47e-05)]_89 chrX:15541489-15541609 2.57e-03 86_[+1(2.50e-05)]_26 chr2R:17496415-17496535 5.27e-01 120 chr3R:10652100-10652220 4.43e-02 108_[+2(1.22e-05)]_4 chr3L:19037865-19037985 2.17e-03 61_[+4(7.44e-05)]_51 chr2R:7478167-7478287 5.91e-03 120 chr2L:9607196-9607316 3.21e-01 120 chr3R:17952574-17952694 5.96e-01 120 chr3R:5036196-5036316 4.88e-03 43_[+1(1.18e-05)]_36_[+5(2.92e-05)]_\ 25 chr3L:371390-371510 4.40e-02 1_[+1(7.47e-05)]_111 chr3R:16258457-16258577 5.56e-03 76_[+1(6.39e-05)]_36 chr2R:17006857-17006977 5.20e-01 120 chr2L:8546838-8546958 1.48e-01 105_[+1(8.65e-05)]_7 chr3L:20286917-20287037 1.65e-02 120 chr2L:9608303-9608423 5.55e-02 54_[+1(2.50e-05)]_58 chr3L:743407-743527 1.12e-02 60_[+2(2.58e-05)]_52 chr3L:9716555-9716675 2.54e-01 120 chr3R:5062334-5062454 2.39e-02 120 chr3L:15774388-15774508 8.35e-01 120 chr2L:19247340-19247460 1.77e-02 15_[+1(8.65e-05)]_30_[+1(3.84e-05)]_\ 59 chr2R:21352821-21352941 9.64e-01 120 chr2L:7131904-7132024 2.96e-01 97_[+1(7.47e-05)]_15 chr2R:23911887-23912007 1.78e-01 120 chr2R:22404500-22404620 9.71e-02 80_[+1(2.50e-05)]_32 chr3R:21889054-21889174 7.39e-03 47_[+1(1.18e-05)]_65 chr2L:10562891-10563011 2.27e-01 120 chr3L:723788-723908 2.52e-01 120 chr2L:14477699-14477819 4.63e-03 18_[+5(1.45e-05)]_32_[+5(2.92e-05)]_\ 54 chr3R:9392197-9392317 4.77e-01 120 chr2L:19388193-19388313 6.65e-02 120 chr3L:18350403-18350523 2.57e-01 23_[+2(2.58e-05)]_89 chr2L:19146124-19146244 1.04e-02 64_[+1(1.18e-05)]_48 chr3R:20297469-20297589 1.84e-01 120 chr3L:10666855-10666975 1.94e-01 43_[+2(2.58e-05)]_69 chr2R:15750299-15750419 1.23e-02 43_[+2(1.22e-05)]_69 chr2R:9145693-9145813 8.58e-02 57_[+2(4.74e-05)]_55 chr4:506819-506939 2.34e-01 99_[+2(2.58e-05)]_13 chr3L:646543-646663 1.19e-01 48_[+1(2.50e-05)]_64 chr3R:16376306-16376426 1.65e-03 5_[+5(1.45e-05)]_76_[+5(5.53e-05)]_\ 1_[+5(1.45e-05)]_14 chr2L:505193-505313 9.18e-02 106_[+1(1.18e-05)]_6 chr3R:9129640-9129760 5.84e-02 34_[+2(1.22e-05)]_78 chr3L:11336240-11336360 4.40e-01 120 chr2R:22398421-22398541 4.87e-02 93_[+1(6.39e-05)]_19 chr3R:8916127-8916247 9.13e-01 120 chr3L:19164455-19164575 1.21e-01 67_[+2(1.22e-05)]_45 chr2L:3831680-3831800 3.04e-01 120 chr3L:109023-109143 1.85e-02 120 chr3R:18236026-18236146 1.97e-02 120 chr3L:22344819-22344939 3.74e-03 72_[+1(1.18e-05)]_40 chr2L:5430830-5430950 3.76e-02 47_[+1(6.39e-05)]_65 chr2L:6182965-6183085 1.04e-01 120 chr2R:18443157-18443277 4.03e-01 120 chr2L:5896434-5896554 2.23e-02 120 chr2R:11552221-11552341 5.53e-03 66_[+1(6.39e-05)]_46 chr3L:12298304-12298424 7.00e-04 26_[+3(3.84e-05)]_86 chr2L:21322287-21322407 1.56e-01 80_[+1(2.50e-05)]_32 chr3L:14287711-14287831 3.94e-02 38_[+1(6.39e-05)]_74 chr2L:6187745-6187865 7.29e-03 20_[+2(1.22e-05)]_92 chrX:4672188-4672308 2.15e-01 120 chr2R:14884932-14885052 8.20e-01 120 chr3R:14711919-14712039 2.88e-01 120 chr2L:11973502-11973622 2.64e-01 120 chr3R:16277772-16277892 2.15e-01 44_[+2(4.74e-05)]_68 chr2R:13334864-13334984 3.03e-04 34_[+2(1.22e-05)]_32_[+4(1.12e-05)]_\ 38 chr2L:5241654-5241774 1.08e-01 120 chr2L:18507112-18507232 2.05e-02 26_[+1(2.50e-05)]_86 chr2L:14387573-14387693 2.76e-01 120 chr2L:1147870-1147990 4.21e-01 120 chr2R:6599490-6599610 1.84e-01 23_[+2(1.22e-05)]_89 chr2R:17405506-17405626 3.82e-01 120 chr3L:3386711-3386831 5.10e-05 49_[+1(8.65e-05)]_9_[+5(1.45e-05)]_\ 46 chrX:15065276-15065396 1.29e-01 55_[+2(2.58e-05)]_57 chr2R:20859911-20860031 4.26e-04 71_[+1(2.50e-05)]_6_[+3(1.92e-05)]_\ 27 chr3R:29558419-29558539 4.82e-02 120 chr3R:7103015-7103135 9.10e-03 47_[+1(2.50e-05)]_65 chr2R:14968405-14968525 6.21e-02 120 chr3L:22133051-22133171 6.22e-01 120 chr2R:8638553-8638673 5.15e-02 79_[+1(2.50e-05)]_33 chr3R:23292396-23292516 3.35e-02 46_[+2(1.22e-05)]_66 chr3R:24620670-24620790 1.02e-01 30_[+2(1.22e-05)]_82 chr2L:14540821-14540941 5.39e-02 94_[+1(6.39e-05)]_18 chr2L:8171528-8171648 2.33e-02 17_[+2(1.22e-05)]_95 chr2R:17169414-17169534 4.96e-01 120 chr2L:3843758-3843878 6.33e-02 91_[+1(2.50e-05)]_21 chr2R:15111349-15111469 1.34e-03 46_[+3(9.14e-06)]_66 chr3L:1807593-1807713 9.64e-01 120 chr3L:15767914-15768034 3.92e-02 76_[+1(1.18e-05)]_36 chr3R:8127369-8127489 7.39e-02 56_[+2(1.22e-05)]_56 chr3L:15010555-15010675 9.22e-01 120 chr2R:22368764-22368884 1.40e-03 120 chr2R:21877365-21877485 5.42e-01 120 chrX:5893396-5893516 2.71e-03 34_[+2(2.58e-05)]_78 chr3L:9897851-9897971 9.17e-03 37_[+1(2.50e-05)]_75 chr3R:30056378-30056498 1.54e-01 42_[+2(2.58e-05)]_70 chr2L:848687-848807 1.94e-02 60_[+2(2.58e-05)]_52 chr3R:14466453-14466573 3.92e-01 120 chr3L:11381159-11381279 5.13e-01 120 chr2R:11787482-11787602 9.99e-01 120 chr3R:5098117-5098237 4.01e-01 120 chr3L:10906827-10906947 4.57e-02 90_[+1(1.18e-05)]_22 chr2R:19818121-19818241 7.86e-02 90_[+1(8.65e-05)]_22 chr3R:13464756-13464876 1.43e-01 120 chr2L:6553925-6554045 3.86e-03 71_[+2(2.58e-05)]_41 chrX:3394549-3394669 9.71e-01 120 chrX:4518054-4518174 3.61e-01 120 chr3R:21237280-21237400 7.00e-02 67_[+1(1.18e-05)]_45 chr3R:24846777-24846897 2.09e-01 35_[+2(2.58e-05)]_77 chr2R:11570728-11570848 1.35e-01 46_[+2(2.58e-05)]_66 chr2L:19897601-19897721 9.07e-02 120 chr3R:19907900-19908020 6.46e-01 120 chr2R:23174685-23174805 1.10e-04 57_[+1(1.18e-05)]_31_[+4(7.44e-05)]_\ 16 chr3R:29291249-29291369 1.71e-01 63_[+2(2.58e-05)]_49 chr3R:9547148-9547268 7.57e-01 120 chr2L:8618694-8618814 3.09e-01 120 chr2L:1395919-1396039 1.36e-03 53_[+2(1.22e-05)]_59 chr3L:9092517-9092637 4.07e-02 98_[+1(6.39e-05)]_14 chr3R:5701247-5701367 2.92e-01 45_[+2(2.58e-05)]_67 chr2R:9307545-9307665 5.08e-01 120 chr2R:17401197-17401317 3.57e-06 49_[+1(2.50e-05)]_8_[+3(9.14e-06)]_\ 12_[+5(4.24e-05)]_27 chr2R:24881939-24882059 9.86e-03 120 chrX:4606573-4606693 4.15e-03 120 chr3L:2392893-2393013 1.74e-01 31_[+2(1.22e-05)]_81 chrX:18905504-18905624 1.06e-01 74_[+1(1.18e-05)]_38 chr3R:14801294-14801414 4.00e-02 75_[+1(3.84e-05)]_37 chr3L:10520921-10521041 1.22e-03 105_[+2(1.22e-05)]_7 chr3R:7122743-7122863 8.10e-02 74_[+1(2.50e-05)]_38 chr2R:12924673-12924793 1.22e-01 75_[+2(2.58e-05)]_37 chr3R:14751185-14751305 1.74e-01 38_[+1(1.18e-05)]_74 chrX:2399628-2399748 1.00e-02 50_[+1(2.50e-05)]_62 chr3R:16566609-16566729 3.06e-01 29_[+2(2.58e-05)]_83 chr3R:23385034-23385154 4.73e-02 82_[+1(1.18e-05)]_30 chr3R:18228973-18229093 2.05e-01 74_[+2(1.22e-05)]_38 chr3L:3126589-3126709 2.17e-01 120 chr2R:22399561-22399681 1.18e-01 120 chr2L:10424079-10424199 4.74e-03 45_[+4(1.12e-05)]_67 chr3R:13466270-13466390 5.09e-01 120 chr2R:16096441-16096561 6.77e-03 5_[+2(6.13e-05)]_107 chrX:13347612-13347732 4.44e-02 29_[+1(6.39e-05)]_69_[+1(1.18e-05)]_\ 6 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n01.farnam.hpc.yale.internal ********************************************************************************