******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/dsx.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3L:16213352-16213472 1.0000 120 chr3L:10375758-10375878 1.0000 120 chr3R:7957147-7957267 1.0000 120 chr3R:19077995-19078115 1.0000 120 chr2L:647731-647851 1.0000 120 chr2R:16308030-16308150 1.0000 120 chrX:21378483-21378603 1.0000 120 chr2L:16267289-16267409 1.0000 120 chr2R:16717099-16717219 1.0000 120 chr3L:13500445-13500565 1.0000 120 chr3L:10459215-10459335 1.0000 120 chr3R:10532572-10532692 1.0000 120 chr3R:15804817-15804937 1.0000 120 chr3L:4271075-4271195 1.0000 120 chr3R:30426778-30426898 1.0000 120 chr3L:16437410-16437530 1.0000 120 chr2R:11572951-11573071 1.0000 120 chr3L:1121795-1121915 1.0000 120 chr2R:20578128-20578248 1.0000 120 chrX:19010650-19010770 1.0000 120 chr3R:29000140-29000260 1.0000 120 chr2L:672440-672560 1.0000 120 chr2R:20179606-20179726 1.0000 120 chr2L:698197-698317 1.0000 120 chr2R:16198281-16198401 1.0000 120 chr2R:12694393-12694513 1.0000 120 chr3L:10751453-10751573 1.0000 120 chr3R:16541432-16541552 1.0000 120 chr2R:5749187-5749307 1.0000 120 chr3R:8328106-8328226 1.0000 120 chr3R:22183078-22183198 1.0000 120 chr3L:2818923-2819043 1.0000 120 chr2R:19964703-19964823 1.0000 120 chr3R:16542677-16542797 1.0000 120 chr3R:26485605-26485725 1.0000 120 chr3L:232406-232526 1.0000 120 chr3R:30844575-30844695 1.0000 120 chr3R:24975184-24975304 1.0000 120 chr2L:14521638-14521758 1.0000 120 chr3L:4352148-4352268 1.0000 120 chr2R:11837108-11837228 1.0000 120 chr3L:11472527-11472647 1.0000 120 chr3L:14497591-14497711 1.0000 120 chr3L:1376485-1376605 1.0000 120 chr3L:14376002-14376122 1.0000 120 chr3L:1120264-1120384 1.0000 120 chr3L:1118580-1118700 1.0000 120 chr3L:16869303-16869423 1.0000 120 chr3L:50934-51054 1.0000 120 chr2R:7587649-7587769 1.0000 120 chr3L:1699917-1700037 1.0000 120 chr3R:5033436-5033556 1.0000 120 chr2L:381809-381929 1.0000 120 chrX:4477440-4477560 1.0000 120 chr3L:29797-29917 1.0000 120 chr3R:21348491-21348611 1.0000 120 chr3L:8652335-8652455 1.0000 120 chr3L:16215550-16215670 1.0000 120 chr3L:620023-620143 1.0000 120 chr3L:20653538-20653658 1.0000 120 chr2R:6522425-6522545 1.0000 120 chr2R:19154427-19154547 1.0000 120 chr2R:18960455-18960575 1.0000 120 chr2R:15225799-15225919 1.0000 120 chr3L:6396451-6396571 1.0000 120 chr3L:8882315-8882435 1.0000 120 chr2R:15225458-15225578 1.0000 120 chr2L:5748708-5748828 1.0000 120 chr3L:565724-565844 1.0000 120 chr2L:4212085-4212205 1.0000 120 chr3L:22848894-22849014 1.0000 120 chr3R:7118704-7118824 1.0000 120 chrX:8466868-8466988 1.0000 120 chr2L:5974868-5974988 1.0000 120 chr3L:3447029-3447149 1.0000 120 chrX:17393445-17393565 1.0000 120 chr2R:7303586-7303706 1.0000 120 chr3R:23132438-23132558 1.0000 120 chr3R:13918875-13918995 1.0000 120 chrX:11548416-11548536 1.0000 120 chr3L:10382008-10382128 1.0000 120 chr2R:18237329-18237449 1.0000 120 chr2L:2425932-2426052 1.0000 120 chr3R:29210191-29210311 1.0000 120 chr3L:16016500-16016620 1.0000 120 chr3L:21524609-21524729 1.0000 120 chr2L:20371258-20371378 1.0000 120 chr2R:18267879-18267999 1.0000 120 chr2L:1930952-1931072 1.0000 120 chr3L:30281-30401 1.0000 120 chr2R:12533208-12533328 1.0000 120 chr3L:30002-30122 1.0000 120 chrX:15029997-15030117 1.0000 120 chr2R:24252190-24252310 1.0000 120 chr3R:11902728-11902848 1.0000 120 chr2L:7145705-7145825 1.0000 120 chr3R:15807445-15807565 1.0000 120 chr2L:1888835-1888955 1.0000 120 chr2R:15225259-15225379 1.0000 120 chr3L:10975238-10975358 1.0000 120 chr3L:16478747-16478867 1.0000 120 chr2L:225422-225542 1.0000 120 chr2R:15918059-15918179 1.0000 120 chr2R:18582450-18582570 1.0000 120 chr3R:17709762-17709882 1.0000 120 chr3L:11279545-11279665 1.0000 120 chr2L:21063278-21063398 1.0000 120 chr2L:8987325-8987445 1.0000 120 chr2L:11027358-11027478 1.0000 120 chr3L:2488803-2488923 1.0000 120 chr3L:544892-545012 1.0000 120 chr2L:14608397-14608517 1.0000 120 chr2L:5502117-5502237 1.0000 120 chr3R:31939761-31939881 1.0000 120 chr2R:24026697-24026817 1.0000 120 chr2L:13431058-13431178 1.0000 120 chr2R:7206829-7206949 1.0000 120 chr3L:21711500-21711620 1.0000 120 chr3R:7969097-7969217 1.0000 120 chr2L:14652103-14652223 1.0000 120 chr2L:14682615-14682735 1.0000 120 chr2R:7587881-7588001 1.0000 120 chr2L:7967035-7967155 1.0000 120 chr3L:1754401-1754521 1.0000 120 chr3R:10686420-10686540 1.0000 120 chr3R:21645869-21645989 1.0000 120 chr2L:7574903-7575023 1.0000 120 chr3R:13934068-13934188 1.0000 120 chr3R:17110727-17110847 1.0000 120 chr2L:14351547-14351667 1.0000 120 chr2L:14254084-14254204 1.0000 120 chr3L:8382624-8382744 1.0000 120 chr3L:16214947-16215067 1.0000 120 chr3L:8045102-8045222 1.0000 120 chr3R:5594976-5595096 1.0000 120 chr2R:7430537-7430657 1.0000 120 chr2L:440397-440517 1.0000 120 chr3R:10573787-10573907 1.0000 120 chr3L:15753782-15753902 1.0000 120 chr2L:15846607-15846727 1.0000 120 chr3L:12449311-12449431 1.0000 120 chr3L:17403513-17403633 1.0000 120 chr2R:8181621-8181741 1.0000 120 chr3R:27685190-27685310 1.0000 120 chr2L:427974-428094 1.0000 120 chr2R:20183258-20183378 1.0000 120 chr3R:21650676-21650796 1.0000 120 chr2R:19936985-19937105 1.0000 120 chr3L:11405501-11405621 1.0000 120 chr2R:16408808-16408928 1.0000 120 chr3L:13217690-13217810 1.0000 120 chrX:21056421-21056541 1.0000 120 chr2R:16018292-16018412 1.0000 120 chrX:10820916-10821036 1.0000 120 chr3R:21780319-21780439 1.0000 120 chrX:17320424-17320544 1.0000 120 chr3R:21649206-21649326 1.0000 120 chr3L:3125491-3125611 1.0000 120 chrX:19296006-19296126 1.0000 120 chr2R:6106129-6106249 1.0000 120 chr2R:10582873-10582993 1.0000 120 chr2R:24252391-24252511 1.0000 120 chr3L:17588810-17588930 1.0000 120 chr2R:6645783-6645903 1.0000 120 chr3L:17491766-17491886 1.0000 120 chr3R:7954622-7954742 1.0000 120 chrX:3686638-3686758 1.0000 120 chr3L:549700-549820 1.0000 120 chrX:3370620-3370740 1.0000 120 chr2R:22996178-22996298 1.0000 120 chr3R:8926696-8926816 1.0000 120 chrX:2517690-2517810 1.0000 120 chr3L:21883259-21883379 1.0000 120 chr3R:21608386-21608506 1.0000 120 chr3L:6320121-6320241 1.0000 120 chr3R:12128414-12128534 1.0000 120 chr2L:7901999-7902119 1.0000 120 chr3R:13307070-13307190 1.0000 120 chr2L:717514-717634 1.0000 120 chrX:12023302-12023422 1.0000 120 chrX:17154767-17154887 1.0000 120 chr2L:7915189-7915309 1.0000 120 chr3L:719305-719425 1.0000 120 chr3R:26483860-26483980 1.0000 120 chr2R:20152078-20152198 1.0000 120 chr3L:2171253-2171373 1.0000 120 chr2L:7114769-7114889 1.0000 120 chr2R:8038115-8038235 1.0000 120 chr3L:16048881-16049001 1.0000 120 chr3L:18036198-18036318 1.0000 120 chrX:20500583-20500703 1.0000 120 chr2L:19111878-19111998 1.0000 120 chr3R:31285922-31286042 1.0000 120 chr3R:7961523-7961643 1.0000 120 chr3R:9889893-9890013 1.0000 120 chr2L:16561471-16561591 1.0000 120 chr2R:17834127-17834247 1.0000 120 chr3L:1084950-1085070 1.0000 120 chr3L:3667366-3667486 1.0000 120 chr2R:17838168-17838288 1.0000 120 chr4:522910-523030 1.0000 120 chr3R:7749649-7749769 1.0000 120 chr3R:9160677-9160797 1.0000 120 chr3R:30343605-30343725 1.0000 120 chr2L:18331319-18331439 1.0000 120 chr3R:7967023-7967143 1.0000 120 chr2L:19071808-19071928 1.0000 120 chr2R:20564490-20564610 1.0000 120 chrX:19473267-19473387 1.0000 120 chr3L:623017-623137 1.0000 120 chr2L:14246706-14246826 1.0000 120 chr3L:10717074-10717194 1.0000 120 chr3R:22195160-22195280 1.0000 120 chr2R:9931544-9931664 1.0000 120 chr2R:8747915-8748035 1.0000 120 chr2L:17376185-17376305 1.0000 120 chr2R:6158245-6158365 1.0000 120 chr2R:11184905-11185025 1.0000 120 chrX:18671937-18672057 1.0000 120 chr3L:22456228-22456348 1.0000 120 chr3R:7969300-7969420 1.0000 120 chrX:9738793-9738913 1.0000 120 chr3R:14497209-14497329 1.0000 120 chr3R:30289425-30289545 1.0000 120 chr3R:7174908-7175028 1.0000 120 chr3R:31297642-31297762 1.0000 120 chrX:12716894-12717014 1.0000 120 chr3L:1205997-1206117 1.0000 120 chr3L:7743891-7744011 1.0000 120 chr3L:14611772-14611892 1.0000 120 chr3R:7973223-7973343 1.0000 120 chr2R:6712168-6712288 1.0000 120 chr3L:14495458-14495578 1.0000 120 chr3L:12461094-12461214 1.0000 120 chr2R:11763029-11763149 1.0000 120 chr3R:19813483-19813603 1.0000 120 chr2R:23718174-23718294 1.0000 120 chr2L:5436095-5436215 1.0000 120 chr2L:9946174-9946294 1.0000 120 chr3L:51792-51912 1.0000 120 chr2R:7753245-7753365 1.0000 120 chr2R:15918260-15918380 1.0000 120 chr2L:3351533-3351653 1.0000 120 chr3R:13853554-13853674 1.0000 120 chrX:17876767-17876887 1.0000 120 chr2L:684237-684357 1.0000 120 chr3L:7369134-7369254 1.0000 120 chr3R:7224084-7224204 1.0000 120 chr3L:10388589-10388709 1.0000 120 chr3R:19091096-19091216 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_dsx/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/dsx.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.28 C 0.223 G 0.232 T 0.265 Background letter frequencies (from file dataset with add-one prior applied): A 0.28 C 0.223 G 0.232 T 0.265 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ACAWTGTW MEME-1 width = 8 sites = 235 llr = 1797 E-value = 1.4e-247 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 Description -------------------------------------------------------------------------------- Simplified A a:853::3 pos.-specific C :a:::::1 probability G :::::a:: matrix T ::257:a6 bits 2.2 * 1.9 * * 1.7 ** ** 1.5 ** ** Relative 1.3 ** ** Entropy 1.1 *** *** (11.0 bits) 0.9 ******* 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACAATGTT consensus TA A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:684237-684357 17 4.11e-05 TTCTGTGGCA ACAATGTT GCCAAGGCGT chrX:17876767-17876887 43 4.11e-05 GAATGCAGTG ACATTGTT GCATTCCTCG chr3L:51792-51912 91 4.11e-05 TTCAACTGCA ACATTGTT GCGCCTAATG chr2L:9946174-9946294 49 4.11e-05 CTGCGTTGAA ACATTGTT TTGTATAGCT chr3R:7973223-7973343 81 4.11e-05 GATATTTAAA ACATTGTT AAATGTTAAT chr3L:14611772-14611892 40 4.11e-05 GTGGTAACAA ACATTGTT GTAGTTGCGT chr3R:7174908-7175028 82 4.11e-05 CCAGTGATTA ACATTGTT GAAGGACAAC chrX:9738793-9738913 51 4.11e-05 TTCCGGGGAA ACAATGTT GCTGTTGTTA chr3L:22456228-22456348 91 4.11e-05 TGACTAAGCG ACATTGTT GCGCGTGCGG chrX:18671937-18672057 59 4.11e-05 TACCATGTGT ACATTGTT GCTGCTGCAG chr2R:11184905-11185025 92 4.11e-05 CCAACAGGCA ACAATGTT ACCATGGCTA chr2R:9931544-9931664 51 4.11e-05 CGGCGGCGCC ACAATGTT GCATTTTGAG chr3R:30343605-30343725 89 4.11e-05 ATGTTGAGCA ACATTGTT GCCAATCGAC chr3L:1084950-1085070 65 4.11e-05 TTTGGCCGCA ACAATGTT GCTGCATTTA chr2L:7915189-7915309 57 4.11e-05 CGCCAGAGCA ACAATGTT GCCGCTGTCC chrX:17154767-17154887 35 4.11e-05 GGCGTTCGCC ACATTGTT GCACTTAAGA chr3L:6320121-6320241 56 4.11e-05 AATAGTGCAA ACATTGTT GCAGAACCGC chr3R:21608386-21608506 23 4.11e-05 AACTTGTGCA ACAATGTT GCAAAAGCAA chrX:2517690-2517810 28 4.11e-05 AGCTGCGCCG ACAATGTT GCCCGTGTTG chrX:3370620-3370740 7 4.11e-05 ATAGCG ACATTGTT GCAAAAGAAA chrX:3686638-3686758 36 4.11e-05 TGCGACGGCA ACATTGTT GCTGCCCCGC chr3R:7954622-7954742 83 4.11e-05 GGGGGGTCCA ACATTGTT GTTTTAAGCA chr2R:6645783-6645903 61 4.11e-05 GTCGATGGCA ACAATGTT GCAGTCCGCA chr2R:6106129-6106249 100 4.11e-05 AAATATCAAC ACATTGTT GCTGGTCAGG chrX:17320424-17320544 40 4.11e-05 agaaccaaca acaatgtt gcaccaggaa chrX:10820916-10821036 90 4.11e-05 TGTACTTTGT ACAATGTT GCAATGGAGT chrX:21056421-21056541 82 4.11e-05 ATAGGGCGAG ACAATGTT GCCTGTTGTC chr3L:13217690-13217810 90 4.11e-05 TGAGTGTGCA ACATTGTT ACAATCAAGT chr2R:16408808-16408928 25 4.11e-05 GGTTAAGGCA ACAATGTT GCAGTTATTA chr2L:427974-428094 77 4.11e-05 TATTTAGAAC ACATTGTT GCTGCTCCCG chr3R:10573787-10573907 61 4.11e-05 ACCCCTCTCT ACATTGTT TGCCGGATCG chr2L:14254084-14254204 49 4.11e-05 ACTACACCCG ACAATGTT GCATTCGCAT chr2L:14652103-14652223 58 4.11e-05 TTGGGTCCCA ACATTGTT GCAGTCCCAT chr2R:7206829-7206949 68 4.11e-05 TTTGCCGGCA ACAATGTT GCGCAACATT chr3R:31939761-31939881 25 4.11e-05 ATTGTTAGCA ACATTGTT GCAGCAACAA chr2L:5502117-5502237 69 4.11e-05 GAAAGAGGCG ACAATGTT GCACACATGT chr3L:544892-545012 75 4.11e-05 ACCGCCCATT ACAATGTT GCTTAACTAC chr3L:2488803-2488923 83 4.11e-05 GATTCGCCAG ACATTGTT GCTATTGTTA chr2L:8987325-8987445 62 4.11e-05 ATTCATTGTT ACATTGTT GCTGTGACAG chr2R:18582450-18582570 53 4.11e-05 CGATGCGGCA ACAATGTT GCTGTCCATG chr2L:1888835-1888955 54 4.11e-05 GGCCTGCCAT ACATTGTT GCTCGAGGAG chr3L:30281-30401 63 4.11e-05 CCTTGCGGCA ACAATGTT GCAACTTCAA chr2R:18267879-18267999 75 4.11e-05 CTGGGTGCAG ACAAtgtt gctgctgcat chr3L:16016500-16016620 37 4.11e-05 CTTAGCCTTA ACAATGTT GCCGCGTGTG chr2L:2425932-2426052 59 4.11e-05 AAGCATTGCA ACATTGTT TATtgttgct chrX:11548416-11548536 65 4.11e-05 GGTTCTTGCA ACATTGTT GCATTTTGCT chr2R:7303586-7303706 56 4.11e-05 AGCTCCACTT ACATTGTT GCGTCTTCGA chrX:17393445-17393565 67 4.11e-05 GCTGACCCAT ACAATGTT GCACTTTGTA chr3L:620023-620143 35 4.11e-05 CCCAAGTGCT ACAATGTT GTGCTCTTGG chr3L:16215550-16215670 51 4.11e-05 TGATAGTGCA ACAATGTT GCACCCCAAT chr3R:21348491-21348611 52 4.11e-05 CGTCGCGGCG ACAATGTT GGAGCTGGCT chr3L:29797-29917 54 4.11e-05 TTCCCATGCA ACAATGTT GCAGAAGAGC chr2L:381809-381929 105 4.11e-05 CACACAGCCT ACAATGTT GCTCTTAA chr3L:1699917-1700037 46 4.11e-05 TTTCACTGCA ACAATGTT GTGACGCGAT chr2R:7587649-7587769 18 4.11e-05 GCCATCAAAT ACATTGTT GCGCACAATG chr3L:50934-51054 44 4.11e-05 TCACTTAGCA ACATTGTT GCAGTCACAG chr3L:1118580-1118700 41 4.11e-05 ACTGGCTGCA ACAATGTT GCACAGCATA chr3L:1120264-1120384 61 4.11e-05 TGTTTCTGCA ACAATGTT GCACGAATCT chr3L:14376002-14376122 65 4.11e-05 ACACGAGGCA ACAATGTT GCATCCACTC chr3L:1376485-1376605 84 4.11e-05 GACTGCGGCA ACAATGTT GGTGAACGTT chr3L:11472527-11472647 43 4.11e-05 CATAAAATTT ACAATGTT GCTTTCAACA chr3R:30844575-30844695 49 4.11e-05 AAAACACGAA ACATTGTT GCAACGAGCG chr3R:26485605-26485725 61 4.11e-05 TTAACAGGAA ACATTGTT GCAGTCAATG chr2R:19964703-19964823 78 4.11e-05 ATCTGTTGCA ACATTGTT GAGGTAATTT chr3R:22183078-22183198 55 4.11e-05 CCCTCGGTTG ACATTGTT GCACCATTCA chr3R:16541432-16541552 47 4.11e-05 TGCCACTGCA ACAATGTT TCCAACATTG chr2L:698197-698317 64 4.11e-05 TCAACATGCT ACAATGTT GCAGGTTTTA chr2L:672440-672560 33 4.11e-05 AAAATCAGCA ACATTGTT GCAGCGTGCA chr3R:29000140-29000260 81 4.11e-05 ACGAATTTAT ACATTGTT TAAGTATCAG chrX:19010650-19010770 77 4.11e-05 TAGTGTGGCA ACAATGTT TGCGCATAAA chr3L:10459215-10459335 64 4.11e-05 CGCCCGTGCA ACAATGTT GTCTGCCACA chr2R:16717099-16717219 67 4.11e-05 AAACATACAT ACAATGTT GCCCGAAAGC chr3L:10375758-10375878 77 4.11e-05 ATTAAGTGCA ACATTGTT GCAAATCGAC chr3L:1205997-1206117 58 8.46e-05 CCAATCCGCA ACATTGTA AGATGGGCAA chr3R:14497209-14497329 27 8.46e-05 CGACTTACAT ACATTGTA GTCAACCAGA chr2L:17376185-17376305 50 8.46e-05 CTGAGACTAG ACATTGTA GACTATGCAC chr3R:22195160-22195280 60 8.46e-05 CATTTCGAAG ACATTGTA GTGTCATTTC chrX:19473267-19473387 83 8.46e-05 GACAGTAGCA ACAATGTA GTTGCAAAGA chr2R:20564490-20564610 62 8.46e-05 CGAAAAACAA ACATTGTA TTCGATCAGG chr3R:7749649-7749769 41 8.46e-05 GCAATGTAAT ACAATGTA ACCCACTCGT chr3R:7961523-7961643 41 8.46e-05 ACGCGTAGAT ACATTGTA TTGATAGAGT chr3L:18036198-18036318 59 8.46e-05 AAGCAACGCA ACAATGTA TAGTAGAAAG chr3R:26483860-26483980 91 8.46e-05 TTGTTTGGCC ACATTGTA TGCTAAATGG chr3L:17491766-17491886 65 8.46e-05 AACAACAACC ACAATGTA AGCGCGATGC chr3L:17588810-17588930 64 8.46e-05 ATAGATGCAC ACAATGTA GTCAGACATC chr2R:10582873-10582993 41 8.46e-05 agcagaagct acaatgta gcaaccgaaa chrX:19296006-19296126 80 8.46e-05 TGAATGAGAA ACAATGTA GCACGTAGGC chr3L:11405501-11405621 65 8.46e-05 AGCAGCAGCA ACATTGTA GATAATGCGC chr2R:20183258-20183378 21 8.46e-05 TAGTTTGGCA ACATTGTA AAAACGCAGA chr3R:5594976-5595096 20 8.46e-05 CGTATCTCAA ACATTGTA TCTTCCGAAC chr3R:10686420-10686540 17 8.46e-05 ATATCCTGCA ACAATGTA TTGCAACAAT chr2L:7967035-7967155 96 8.46e-05 GGGAGGCGCA ACAATGTA CGATTTTTAT chr2R:15918059-15918179 64 8.46e-05 GTGGTTGCCT ACATTGTA ACTTGTTGTA chr3L:10975238-10975358 72 8.46e-05 GAATGGGGCA ACATTGTA TACACGGCGA chr2R:12533208-12533328 48 8.46e-05 CATCTGGGCA ACAATGTA TTTCGCTTTA chr3L:21524609-21524729 72 8.46e-05 CTGCATTCTT ACAATGTA ACAGGAATAT chr3R:29210191-29210311 49 8.46e-05 CATACGGTCT ACAATGTA TCTCCTCtgt chr2R:18237329-18237449 58 8.46e-05 TCCGGGCCGT ACAATGTA GCTTGCTGGG chr3L:3447029-3447149 65 8.46e-05 ACAATGGCCT ACAATGTA GTCGAAAAGT chrX:8466868-8466988 77 8.46e-05 AATCTTTGCA ACATTGTA GGGAAGCTCC chr3R:7118704-7118824 66 8.46e-05 TAATATAGCA ACATTGTA TCCAAAAAGA chr3L:6396451-6396571 38 8.46e-05 CCACTTGCCT ACATTGTA GGCCGActtt chr2R:6522425-6522545 44 8.46e-05 TAAATGTAAT ACAATGTA AAAGTAGCAG chr2L:14521638-14521758 100 8.46e-05 CATATATGCA ACAATGTA GACTGCAATT chr2R:5749187-5749307 32 8.46e-05 tgcaactgca acAATGTA CACTCAGCCC chr2R:16198281-16198401 35 8.46e-05 GAGCGCGACG ACATTGTA GTGATGAATA chr2R:20179606-20179726 59 8.46e-05 ACAAGTTAAT ACATTGTA GTTGGGCCTA chr3R:19077995-19078115 59 8.46e-05 gcaacttgca acATTGTA GCGATTGCCA chr3L:16213352-16213472 61 8.46e-05 gattgctgCA ACAATGTA GCACGTTGAT chr3L:12461094-12461214 36 1.28e-04 AGATTTGGCA ACAAAGTT GCAGGACAAT chrX:12716894-12717014 56 1.28e-04 aggctggcaa acaaaGTT GCACAGCAAC chr3R:31297642-31297762 62 1.28e-04 AGATGCGGCA ACAAAGTT GCCTAGATGC chr3L:3667366-3667486 31 1.28e-04 AGCGTCGGAG ACAAAGTT GCGCAAGACG chr2L:7114769-7114889 53 1.28e-04 AAACGAGGCG ACAAAGTT GCTCAGCATC chrX:12023302-12023422 51 1.28e-04 TAAACTTGTT ACATAGTT GCGTTTATTT chr2L:7901999-7902119 42 1.28e-04 GCCGCAGAAT ACAAAGTT AGTTGGCAGC chr2R:22996178-22996298 32 1.28e-04 GTCACTTGCA ACAAAGTT GCAAATGTGC chr3R:21650676-21650796 74 1.28e-04 GGTGGCGACT ACAAAGTT GCACTCACGC chr2R:7430537-7430657 73 1.28e-04 TTGGGATCTT ACATAGTT GTAGACAATG chr3L:8382624-8382744 87 1.28e-04 TCTTCTGCAT ACAAAGTT GCAGGAAAAG chr3R:13934068-13934188 62 1.28e-04 CACGCAGGCT ACAAAGTT GTCAGGCCAT chr3R:21645869-21645989 56 1.28e-04 GGCAATGCCA ACAAAGTT GTCAAATCAA chr2L:14682615-14682735 59 1.28e-04 AATAGCAGCA ACAAAGTT AAAAAGATAA chr3R:17709762-17709882 52 1.28e-04 catgccaACG ACAAAGTT GCAACAAAGC chr3R:15807445-15807565 72 1.28e-04 AGGTGCTGCA ACAAAGTT ATCAATATAC chr2R:24252190-24252310 23 1.28e-04 TTTGGCTGCA ACAAAGTT GCAGCGGCAT chr2L:20371258-20371378 46 1.28e-04 GGTTACGGTT ACAAAGTT GCTGCTAAAG chr2L:5748708-5748828 68 1.28e-04 CCCACTGCAA ACAAAGTT GCCGGTGGGA chr3L:8882315-8882435 58 1.28e-04 AAGAGCACTA ACAAAGTT GCTGGGGCAT chr3L:20653538-20653658 92 1.28e-04 CCGCAGCCAA ACAAAGTT GCATCCAGAC chr3L:8652335-8652455 61 1.28e-04 TTAGCGCCAA ACAAAGTT GCAAGCCGAA chr2R:11837108-11837228 64 1.28e-04 GGATTCAGAT ACAAAGTT GCATGGAATT chr3L:10751453-10751573 56 1.28e-04 AGACAGATAA ACAAAGTT GCAGTTGTGT chr2R:12694393-12694513 42 1.28e-04 GAGAGCCGCA ACAAAGTT GCAAAGTCAA chr3R:10532572-10532692 111 1.28e-04 GGTGGAGCAC ACAAAGTT GT chr3R:7957147-7957267 51 1.28e-04 GAAATTTGCA ACAAAGTT GCCATGGCCG chr3R:19091096-19091216 59 1.67e-04 GACTGCGGTG ACTTTGTT GCCGTGCTGT chr3L:10717074-10717194 57 1.67e-04 GCTGCTCTTG ACTTTGTT GTGTTTCACG chr3L:21883259-21883379 55 1.67e-04 TGAGGCCTGT ACTTTGTT GCATTTTCTA chr3R:8926696-8926816 104 1.67e-04 AACGACTACA ACTTTGTT GCAAGCGAT chr3L:549700-549820 29 1.67e-04 GTTTCCGCTT ACTTTGTT GCCTTTTCAT chr2R:8181621-8181741 67 1.67e-04 ATGCGTCGCA ACTTTGTT CTCTAATTTA chr3R:17110727-17110847 61 1.67e-04 AGATTGGATT ACTTTGTT GGTCGGGTGG chr3L:1754401-1754521 31 1.67e-04 TTTGCGTGCA ACTTTGTT GTGACAATTT chr2L:13431058-13431178 42 1.67e-04 TCAACTTGCA ACTTTGTT GCCCTGGCAT chr2L:14608397-14608517 87 1.67e-04 ATGCGCAGCT ACTTTGTT GCAATCATAA chr2L:21063278-21063398 76 1.67e-04 ATATGTCGCA ACTTTGTT GCTTTTGATA chr3L:11279545-11279665 66 1.67e-04 GGGACTTGCA ACTTTGTT GCGGCTTCCA chr2R:15225259-15225379 70 1.67e-04 CGACTTGGCA ACTATGTT GCACAGAGCC chrX:15029997-15030117 74 1.67e-04 GGTCAAGTTG ACTTtgtt gtcgtctgac chr2L:1930952-1931072 12 1.67e-04 CGCTGGAGCC ACTTTGTT TTGTTTTGTT chr3R:23132438-23132558 55 1.67e-04 CGGTTTTCTG ACTTTGTT GCCGTTTTTC chr3L:22848894-22849014 35 1.67e-04 ATTGCCAGTT ACTTTGTT GCTAATTGGG chr3L:565724-565844 65 1.67e-04 GTCGCCGGCA ACTTTGTT GGCCGAGCAA chr3L:16869303-16869423 50 1.67e-04 TGTGTCGCCA ACTTTGTT GCAGCTGACT chr3L:4352148-4352268 76 1.67e-04 TTGAGTGGCA ACTATGTT GCCACCTAAT chr3R:24975184-24975304 98 1.67e-04 TGCGGCAGCT ACTTTGTT GCTGTCGTTG chr3R:8328106-8328226 39 1.67e-04 TTAATCCTAT ACTTTGTT GCAAGCTACA chr3L:16437410-16437530 62 1.67e-04 GATGCGGACT ACTTTGTT GCGCCTGCCT chr3L:10388589-10388709 113 2.13e-04 TCAAGAGCGA ACAAAGTA chr2R:7753245-7753365 61 2.13e-04 tgcgagtgca aCAAAGTA TCTGCGACTG chr3L:7743891-7744011 84 2.13e-04 TAAGACTACA ACAAAGTA AAAACCAAAG chr2R:8747915-8748035 26 2.13e-04 TTTTGACGCA ACAAAGTA GCGATATAAA chr2R:17838168-17838288 61 2.13e-04 TCACCGGCGG ACAAAGTA GCCAACAGAC chr2R:8038115-8038235 43 2.13e-04 CATCATAGCA ACAAAGTA GTCATATGCT chr3R:13307070-13307190 31 2.13e-04 GACTCGATCT ACAAAGTA GTGAAATTTA chr3L:3125491-3125611 71 2.13e-04 ACAAGCAGAT ACAAAGTA AACTTCTTTA chr3R:21780319-21780439 85 2.13e-04 AAAAGCAGCT ACAAAGTA TAGCCATCAA chr3L:16478747-16478867 33 2.13e-04 CGCGCCAGCA ACAAAGTA TATATGGTAG chr2L:4212085-4212205 92 2.13e-04 ACCTTTCGTT ACAAAGTA AAGAAAAGGT chr3L:232406-232526 37 2.13e-04 GAATCAAAAT ACAAAGTA GTAAATAAGA chr3L:2818923-2819043 43 2.13e-04 ATGTGCAGAT ACAAAGTA ACACAAAGTG chr2R:20578128-20578248 52 2.13e-04 aagaacagca acaaaGTA AAGAATAAAG chr3R:30426778-30426898 72 2.13e-04 AAGGAGAGCT ACAAAGTA AACAGTTCAC chr2R:16308030-16308150 75 2.13e-04 CAGTGTGGCA ACAAAGTA GCAACATTTA chr3R:7224084-7224204 92 2.54e-04 CTTTTGTTTT ACTTTGTA GCTGCTTTTG chr2R:6712168-6712288 37 2.54e-04 AATCAATGCA ACTTTGTA AGGAAATCAC chr3R:30289425-30289545 65 2.54e-04 GTGTTGCATG ACTTTGTA GTAAACCTGA chr2R:6158245-6158365 64 2.54e-04 TGCGCCTGTG ACTTTGTA ACACACTTTT chr3R:9160677-9160797 82 2.54e-04 CAGATTTCAT ACTTTGTA ATCGAGGAGG chr3L:16048881-16049001 18 2.54e-04 GATTGCTGCA ACTTTGTA ATTCCTAAGT chr3L:2171253-2171373 105 2.54e-04 TTTAAATATT ACTTTGTA TCCTAAAA chr3L:719305-719425 50 2.54e-04 agcagcagca actttgta gcagcaacag chr3L:17403513-17403633 71 2.54e-04 CTTGGGACAG ACTTTGTA TTGCTTGTAG chr2L:15846607-15846727 75 2.54e-04 TCCCTCAGCT ACTTTGTA TGCAGCGACT chr2L:14351547-14351667 37 2.54e-04 TGCAAAGACA ACTTTGTA AGCCGAGCTT chr3L:21711500-21711620 92 2.54e-04 AGCCCGCGAG ACTTTGTA TGCACACTTC chr2R:19154427-19154547 75 2.54e-04 CTCGGGCGCA ACTTTGTA AGATTCGAGA chrX:4477440-4477560 54 2.54e-04 TATGACAACA ACTTTGTA TTGGCACACG chr3R:16542677-16542797 25 2.54e-04 GCATGTATTT ACTTTGTA TCACTTGTCA chrX:21378483-21378603 37 2.54e-04 TCTTTCGACA ACTTTGTA TTCAATTAAT chr2L:19111878-19111998 109 2.89e-04 cgatatcgca aCATTGTC AGCG chr2L:717514-717634 24 2.89e-04 ATCAATAGCA ACATTGTC GTTGTTGTAG chr2R:19936985-19937105 30 2.89e-04 AACTTCGTCT ACAATGTC GGCGATGACT chr2L:440397-440517 44 2.89e-04 CCATTTGGCA ACATTGTC ATCCAGTGGT chr2L:7574903-7575023 61 2.89e-04 aggagaTGCA ACATTGTC ATTTAACGGG chr2L:11027358-11027478 92 2.89e-04 TTGTCGTCGG ACAATGTC ACTGAACCAG chr3R:5033436-5033556 41 2.89e-04 CCCATATGCA ACAATGTC GGCGCAGTGT chr2L:647731-647851 61 2.89e-04 CGGATTCGCA ACATTGTC GCTGGTTGCG chr3L:8045102-8045222 75 3.25e-04 TAAATGTGCA ACATTGTG GCAGGCAGCA chr3R:11902728-11902848 65 3.25e-04 GCAACAGGCA ACATTGTG GCAAATTGTA chr2L:5974868-5974988 61 3.25e-04 TACCAATGCA ACAATGTG GCAGTGCGAA chr3L:1121795-1121915 63 3.25e-04 CAGACATGCA ACATTGTG TGGCAATGTG chr3L:4271075-4271195 51 3.25e-04 ATCAAACCAT ACATTGTG GCTTCATAAC chr2L:19071808-19071928 65 3.66e-04 AAACAGAGGC ACTTAGTT TGAAATACAA chr2R:17834127-17834247 52 4.46e-04 TGGCTGCGAT ACAAAGTC GCGGCTTCAC chr2L:225422-225542 59 4.46e-04 AAGGGAGGAT ACAAAGTC GCAAGGCGAG chr3R:13918875-13918995 43 4.46e-04 TATTGCGGCT ACAAAGTC TTGGCTTTCC chr3L:7369134-7369254 91 5.17e-04 AATATTTCCT ACTTTGTC GTTGAATTGA chr3L:623017-623137 52 5.17e-04 ACTCGGTGCT ACAAAGTG GCAAACAGGT chr2L:18331319-18331439 25 5.17e-04 ATGGTTTACA ACTTTGTC GCCTAACTAA chr2R:20152078-20152198 54 5.17e-04 GTATGCTGCA ACAAAGTG CAGCTCGTAA chr3R:27685190-27685310 42 5.17e-04 CACTGGCCAT ACAAAgtg gtagtgctgg chr3L:16214947-16215067 66 5.17e-04 CGACGAAAAT ACATAGTG ACTCATGGGC chr2R:24026697-24026817 87 5.17e-04 AGATACGCAT ACAAAGTG GCCTGCCTGG chr3R:15804817-15804937 39 5.17e-04 ATCGGAGCAG ACAAAGTG CTACAAACTT chr3L:14495458-14495578 68 5.56e-04 AACCAGCGCA ACAATCTT GCAGACAGGA chr3L:10382008-10382128 17 5.56e-04 AATAAGTGAC ACATTCTT TTCTACAAAC chrX:20500583-20500703 88 6.34e-04 ACGGAATGCA ACAATGAT GCACCCCTTC chr3R:13853554-13853674 61 6.67e-04 ACAAATCGCA ACCTTGTT GCAACAGAGA chr3L:15753782-15753902 28 7.55e-04 GAGTTCTGCA ACATTTTT GCAAAGTAAT chr2R:11572951-11573071 7 7.55e-04 GTATAT ACATTCTA TAGAAAATTC chr4:522910-523030 56 7.73e-04 CCTTGCAGCA ACAGTGTT GCCCTGCCCG chr3R:7969097-7969217 50 8.95e-04 AAAAACGCCA ACAAACTT GGGGCAGAAC chr3L:13500445-13500565 59 8.95e-04 GACTTAGGCA ACAAACTT GCAGGACAGA chr3L:12449311-12449431 69 1.02e-03 GCATAAAATT AAAATGTT GCACGCTCCA chr3L:14497591-14497711 78 1.02e-03 GTGATCTCTT AAAATGTT TACTTAGCAT chr2L:5436095-5436215 42 1.14e-03 ACTAATTGCA ACAAGGTT GCATGGGCAC chr2L:3351533-3351653 30 1.22e-03 CTTAAATGCA ACAAAGAT GGGAAGTGGC chr2R:15918260-15918380 79 1.22e-03 TCAATTAAAT ACATAGAT TGCAGCATGT chr2L:16561471-16561591 94 1.22e-03 TGTCCATTTC CCATTGTT GCCTGCGCCG chr2R:11763029-11763149 89 1.41e-03 TTTTGTAAAC ACAAATTT TTAGTTTTCC chr2R:7587881-7588001 8 1.60e-03 AAGGTAA ACTTTTTT TTCCTCATTC chr2R:23718174-23718294 59 1.72e-03 ACAATGACGA ACAAAGAA GCGCTGGCAG chr3R:31285922-31286042 33 1.90e-03 TGTGAAATAT ACCAAGTA CTTACTCTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:684237-684357 4.1e-05 16_[+1]_96 chrX:17876767-17876887 4.1e-05 42_[+1]_70 chr3L:51792-51912 4.1e-05 90_[+1]_22 chr2L:9946174-9946294 4.1e-05 48_[+1]_64 chr3R:7973223-7973343 4.1e-05 80_[+1]_32 chr3L:14611772-14611892 4.1e-05 39_[+1]_73 chr3R:7174908-7175028 4.1e-05 81_[+1]_31 chrX:9738793-9738913 4.1e-05 50_[+1]_62 chr3L:22456228-22456348 4.1e-05 90_[+1]_22 chrX:18671937-18672057 4.1e-05 58_[+1]_54 chr2R:11184905-11185025 4.1e-05 91_[+1]_21 chr2R:9931544-9931664 4.1e-05 50_[+1]_62 chr3R:30343605-30343725 4.1e-05 88_[+1]_24 chr3L:1084950-1085070 4.1e-05 64_[+1]_48 chr2L:7915189-7915309 4.1e-05 56_[+1]_56 chrX:17154767-17154887 4.1e-05 34_[+1]_78 chr3L:6320121-6320241 4.1e-05 55_[+1]_57 chr3R:21608386-21608506 4.1e-05 22_[+1]_90 chrX:2517690-2517810 4.1e-05 27_[+1]_85 chrX:3370620-3370740 4.1e-05 6_[+1]_106 chrX:3686638-3686758 4.1e-05 35_[+1]_77 chr3R:7954622-7954742 4.1e-05 82_[+1]_30 chr2R:6645783-6645903 4.1e-05 60_[+1]_52 chr2R:6106129-6106249 4.1e-05 99_[+1]_13 chrX:17320424-17320544 4.1e-05 39_[+1]_73 chrX:10820916-10821036 4.1e-05 89_[+1]_23 chrX:21056421-21056541 4.1e-05 81_[+1]_31 chr3L:13217690-13217810 4.1e-05 89_[+1]_23 chr2R:16408808-16408928 4.1e-05 24_[+1]_88 chr2L:427974-428094 4.1e-05 76_[+1]_36 chr3R:10573787-10573907 4.1e-05 60_[+1]_52 chr2L:14254084-14254204 4.1e-05 48_[+1]_64 chr2L:14652103-14652223 4.1e-05 57_[+1]_55 chr2R:7206829-7206949 4.1e-05 67_[+1]_45 chr3R:31939761-31939881 4.1e-05 24_[+1]_88 chr2L:5502117-5502237 4.1e-05 68_[+1]_44 chr3L:544892-545012 4.1e-05 74_[+1]_38 chr3L:2488803-2488923 4.1e-05 82_[+1]_30 chr2L:8987325-8987445 4.1e-05 61_[+1]_51 chr2R:18582450-18582570 4.1e-05 52_[+1]_60 chr2L:1888835-1888955 4.1e-05 53_[+1]_59 chr3L:30281-30401 4.1e-05 62_[+1]_50 chr2R:18267879-18267999 4.1e-05 74_[+1]_38 chr3L:16016500-16016620 4.1e-05 36_[+1]_76 chr2L:2425932-2426052 4.1e-05 58_[+1]_54 chrX:11548416-11548536 4.1e-05 64_[+1]_48 chr2R:7303586-7303706 4.1e-05 55_[+1]_57 chrX:17393445-17393565 4.1e-05 66_[+1]_46 chr3L:620023-620143 4.1e-05 34_[+1]_78 chr3L:16215550-16215670 4.1e-05 50_[+1]_62 chr3R:21348491-21348611 4.1e-05 51_[+1]_61 chr3L:29797-29917 4.1e-05 53_[+1]_59 chr2L:381809-381929 4.1e-05 104_[+1]_8 chr3L:1699917-1700037 4.1e-05 45_[+1]_67 chr2R:7587649-7587769 4.1e-05 17_[+1]_95 chr3L:50934-51054 4.1e-05 43_[+1]_69 chr3L:1118580-1118700 4.1e-05 40_[+1]_72 chr3L:1120264-1120384 4.1e-05 60_[+1]_52 chr3L:14376002-14376122 4.1e-05 64_[+1]_48 chr3L:1376485-1376605 4.1e-05 83_[+1]_29 chr3L:11472527-11472647 4.1e-05 42_[+1]_70 chr3R:30844575-30844695 4.1e-05 48_[+1]_64 chr3R:26485605-26485725 4.1e-05 60_[+1]_52 chr2R:19964703-19964823 4.1e-05 77_[+1]_35 chr3R:22183078-22183198 4.1e-05 54_[+1]_58 chr3R:16541432-16541552 4.1e-05 46_[+1]_66 chr2L:698197-698317 4.1e-05 63_[+1]_49 chr2L:672440-672560 4.1e-05 32_[+1]_80 chr3R:29000140-29000260 4.1e-05 80_[+1]_32 chrX:19010650-19010770 4.1e-05 76_[+1]_36 chr3L:10459215-10459335 4.1e-05 63_[+1]_49 chr2R:16717099-16717219 4.1e-05 66_[+1]_46 chr3L:10375758-10375878 4.1e-05 76_[+1]_36 chr3L:1205997-1206117 8.5e-05 57_[+1]_55 chr3R:14497209-14497329 8.5e-05 26_[+1]_86 chr2L:17376185-17376305 8.5e-05 49_[+1]_63 chr3R:22195160-22195280 8.5e-05 59_[+1]_53 chrX:19473267-19473387 8.5e-05 82_[+1]_30 chr2R:20564490-20564610 8.5e-05 61_[+1]_51 chr3R:7749649-7749769 8.5e-05 40_[+1]_72 chr3R:7961523-7961643 8.5e-05 40_[+1]_72 chr3L:18036198-18036318 8.5e-05 58_[+1]_54 chr3R:26483860-26483980 8.5e-05 90_[+1]_22 chr3L:17491766-17491886 8.5e-05 64_[+1]_48 chr3L:17588810-17588930 8.5e-05 63_[+1]_49 chr2R:10582873-10582993 8.5e-05 40_[+1]_72 chrX:19296006-19296126 8.5e-05 79_[+1]_33 chr3L:11405501-11405621 8.5e-05 64_[+1]_48 chr2R:20183258-20183378 8.5e-05 20_[+1]_92 chr3R:5594976-5595096 8.5e-05 19_[+1]_93 chr3R:10686420-10686540 8.5e-05 16_[+1]_96 chr2L:7967035-7967155 8.5e-05 95_[+1]_17 chr2R:15918059-15918179 8.5e-05 63_[+1]_49 chr3L:10975238-10975358 8.5e-05 71_[+1]_41 chr2R:12533208-12533328 8.5e-05 47_[+1]_65 chr3L:21524609-21524729 8.5e-05 71_[+1]_41 chr3R:29210191-29210311 8.5e-05 48_[+1]_64 chr2R:18237329-18237449 8.5e-05 57_[+1]_55 chr3L:3447029-3447149 8.5e-05 64_[+1]_48 chrX:8466868-8466988 8.5e-05 76_[+1]_36 chr3R:7118704-7118824 8.5e-05 65_[+1]_47 chr3L:6396451-6396571 8.5e-05 37_[+1]_75 chr2R:6522425-6522545 8.5e-05 43_[+1]_69 chr2L:14521638-14521758 8.5e-05 99_[+1]_13 chr2R:5749187-5749307 8.5e-05 31_[+1]_81 chr2R:16198281-16198401 8.5e-05 34_[+1]_78 chr2R:20179606-20179726 8.5e-05 58_[+1]_54 chr3R:19077995-19078115 8.5e-05 58_[+1]_54 chr3L:16213352-16213472 8.5e-05 60_[+1]_52 chr3L:12461094-12461214 0.00013 35_[+1]_77 chrX:12716894-12717014 0.00013 55_[+1]_57 chr3R:31297642-31297762 0.00013 61_[+1]_51 chr3L:3667366-3667486 0.00013 30_[+1]_82 chr2L:7114769-7114889 0.00013 52_[+1]_60 chrX:12023302-12023422 0.00013 50_[+1]_62 chr2L:7901999-7902119 0.00013 41_[+1]_71 chr2R:22996178-22996298 0.00013 31_[+1]_81 chr3R:21650676-21650796 0.00013 73_[+1]_39 chr2R:7430537-7430657 0.00013 72_[+1]_40 chr3L:8382624-8382744 0.00013 86_[+1]_26 chr3R:13934068-13934188 0.00013 61_[+1]_51 chr3R:21645869-21645989 0.00013 55_[+1]_57 chr2L:14682615-14682735 0.00013 58_[+1]_54 chr3R:17709762-17709882 0.00013 51_[+1]_61 chr3R:15807445-15807565 0.00013 71_[+1]_41 chr2R:24252190-24252310 0.00013 22_[+1]_90 chr2L:20371258-20371378 0.00013 45_[+1]_67 chr2L:5748708-5748828 0.00013 67_[+1]_45 chr3L:8882315-8882435 0.00013 57_[+1]_55 chr3L:20653538-20653658 0.00013 91_[+1]_21 chr3L:8652335-8652455 0.00013 60_[+1]_52 chr2R:11837108-11837228 0.00013 63_[+1]_49 chr3L:10751453-10751573 0.00013 55_[+1]_57 chr2R:12694393-12694513 0.00013 41_[+1]_71 chr3R:10532572-10532692 0.00013 110_[+1]_2 chr3R:7957147-7957267 0.00013 50_[+1]_62 chr3R:19091096-19091216 0.00017 58_[+1]_54 chr3L:10717074-10717194 0.00017 56_[+1]_56 chr3L:21883259-21883379 0.00017 54_[+1]_58 chr3R:8926696-8926816 0.00017 103_[+1]_9 chr3L:549700-549820 0.00017 28_[+1]_84 chr2R:8181621-8181741 0.00017 66_[+1]_46 chr3R:17110727-17110847 0.00017 60_[+1]_52 chr3L:1754401-1754521 0.00017 30_[+1]_82 chr2L:13431058-13431178 0.00017 41_[+1]_71 chr2L:14608397-14608517 0.00017 86_[+1]_26 chr2L:21063278-21063398 0.00017 75_[+1]_37 chr3L:11279545-11279665 0.00017 65_[+1]_47 chr2R:15225259-15225379 0.00017 69_[+1]_43 chrX:15029997-15030117 0.00017 73_[+1]_39 chr2L:1930952-1931072 0.00017 11_[+1]_101 chr3R:23132438-23132558 0.00017 54_[+1]_58 chr3L:22848894-22849014 0.00017 34_[+1]_78 chr3L:565724-565844 0.00017 64_[+1]_48 chr3L:16869303-16869423 0.00017 49_[+1]_63 chr3L:4352148-4352268 0.00017 75_[+1]_37 chr3R:24975184-24975304 0.00017 97_[+1]_15 chr3R:8328106-8328226 0.00017 38_[+1]_74 chr3L:16437410-16437530 0.00017 61_[+1]_51 chr3L:10388589-10388709 0.00021 112_[+1] chr2R:7753245-7753365 0.00021 60_[+1]_52 chr3L:7743891-7744011 0.00021 83_[+1]_29 chr2R:8747915-8748035 0.00021 25_[+1]_87 chr2R:17838168-17838288 0.00021 60_[+1]_52 chr2R:8038115-8038235 0.00021 42_[+1]_70 chr3R:13307070-13307190 0.00021 30_[+1]_82 chr3L:3125491-3125611 0.00021 70_[+1]_42 chr3R:21780319-21780439 0.00021 84_[+1]_28 chr3L:16478747-16478867 0.00021 32_[+1]_80 chr2L:4212085-4212205 0.00021 91_[+1]_21 chr3L:232406-232526 0.00021 36_[+1]_76 chr3L:2818923-2819043 0.00021 42_[+1]_70 chr2R:20578128-20578248 0.00021 51_[+1]_61 chr3R:30426778-30426898 0.00021 71_[+1]_41 chr2R:16308030-16308150 0.00021 74_[+1]_38 chr3R:7224084-7224204 0.00025 91_[+1]_21 chr2R:6712168-6712288 0.00025 36_[+1]_76 chr3R:30289425-30289545 0.00025 64_[+1]_48 chr2R:6158245-6158365 0.00025 63_[+1]_49 chr3R:9160677-9160797 0.00025 81_[+1]_31 chr3L:16048881-16049001 0.00025 17_[+1]_95 chr3L:2171253-2171373 0.00025 104_[+1]_8 chr3L:719305-719425 0.00025 49_[+1]_63 chr3L:17403513-17403633 0.00025 70_[+1]_42 chr2L:15846607-15846727 0.00025 74_[+1]_38 chr2L:14351547-14351667 0.00025 36_[+1]_76 chr3L:21711500-21711620 0.00025 91_[+1]_21 chr2R:19154427-19154547 0.00025 74_[+1]_38 chrX:4477440-4477560 0.00025 53_[+1]_59 chr3R:16542677-16542797 0.00025 24_[+1]_88 chrX:21378483-21378603 0.00025 36_[+1]_76 chr2L:19111878-19111998 0.00029 108_[+1]_4 chr2L:717514-717634 0.00029 23_[+1]_89 chr2R:19936985-19937105 0.00029 29_[+1]_83 chr2L:440397-440517 0.00029 43_[+1]_69 chr2L:7574903-7575023 0.00029 60_[+1]_52 chr2L:11027358-11027478 0.00029 91_[+1]_21 chr3R:5033436-5033556 0.00029 40_[+1]_72 chr2L:647731-647851 0.00029 60_[+1]_52 chr3L:8045102-8045222 0.00032 74_[+1]_38 chr3R:11902728-11902848 0.00032 64_[+1]_48 chr2L:5974868-5974988 0.00032 60_[+1]_52 chr3L:1121795-1121915 0.00032 62_[+1]_50 chr3L:4271075-4271195 0.00032 50_[+1]_62 chr2L:19071808-19071928 0.00037 64_[+1]_48 chr2R:17834127-17834247 0.00045 51_[+1]_61 chr2L:225422-225542 0.00045 58_[+1]_54 chr3R:13918875-13918995 0.00045 42_[+1]_70 chr3L:7369134-7369254 0.00052 90_[+1]_22 chr3L:623017-623137 0.00052 51_[+1]_61 chr2L:18331319-18331439 0.00052 24_[+1]_88 chr2R:20152078-20152198 0.00052 53_[+1]_59 chr3R:27685190-27685310 0.00052 41_[+1]_71 chr3L:16214947-16215067 0.00052 65_[+1]_47 chr2R:24026697-24026817 0.00052 86_[+1]_26 chr3R:15804817-15804937 0.00052 38_[+1]_74 chr3L:14495458-14495578 0.00056 67_[+1]_45 chr3L:10382008-10382128 0.00056 16_[+1]_96 chrX:20500583-20500703 0.00063 87_[+1]_25 chr3R:13853554-13853674 0.00067 60_[+1]_52 chr3L:15753782-15753902 0.00076 27_[+1]_85 chr2R:11572951-11573071 0.00076 6_[+1]_106 chr4:522910-523030 0.00077 55_[+1]_57 chr3R:7969097-7969217 0.0009 49_[+1]_63 chr3L:13500445-13500565 0.0009 58_[+1]_54 chr3L:12449311-12449431 0.001 68_[+1]_44 chr3L:14497591-14497711 0.001 77_[+1]_35 chr2L:5436095-5436215 0.0011 41_[+1]_71 chr2L:3351533-3351653 0.0012 29_[+1]_83 chr2R:15918260-15918380 0.0012 78_[+1]_34 chr2L:16561471-16561591 0.0012 93_[+1]_19 chr2R:11763029-11763149 0.0014 88_[+1]_24 chr2R:7587881-7588001 0.0016 7_[+1]_105 chr2R:23718174-23718294 0.0017 58_[+1]_54 chr3R:31285922-31286042 0.0019 32_[+1]_80 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACAWTGTW width=8 seqs=235 chr2L:684237-684357 ( 17) ACAATGTT 1 chrX:17876767-17876887 ( 43) ACATTGTT 1 chr3L:51792-51912 ( 91) ACATTGTT 1 chr2L:9946174-9946294 ( 49) ACATTGTT 1 chr3R:7973223-7973343 ( 81) ACATTGTT 1 chr3L:14611772-14611892 ( 40) ACATTGTT 1 chr3R:7174908-7175028 ( 82) ACATTGTT 1 chrX:9738793-9738913 ( 51) ACAATGTT 1 chr3L:22456228-22456348 ( 91) ACATTGTT 1 chrX:18671937-18672057 ( 59) ACATTGTT 1 chr2R:11184905-11185025 ( 92) ACAATGTT 1 chr2R:9931544-9931664 ( 51) ACAATGTT 1 chr3R:30343605-30343725 ( 89) ACATTGTT 1 chr3L:1084950-1085070 ( 65) ACAATGTT 1 chr2L:7915189-7915309 ( 57) ACAATGTT 1 chrX:17154767-17154887 ( 35) ACATTGTT 1 chr3L:6320121-6320241 ( 56) ACATTGTT 1 chr3R:21608386-21608506 ( 23) ACAATGTT 1 chrX:2517690-2517810 ( 28) ACAATGTT 1 chrX:3370620-3370740 ( 7) ACATTGTT 1 chrX:3686638-3686758 ( 36) ACATTGTT 1 chr3R:7954622-7954742 ( 83) ACATTGTT 1 chr2R:6645783-6645903 ( 61) ACAATGTT 1 chr2R:6106129-6106249 ( 100) ACATTGTT 1 chrX:17320424-17320544 ( 40) ACAATGTT 1 chrX:10820916-10821036 ( 90) ACAATGTT 1 chrX:21056421-21056541 ( 82) ACAATGTT 1 chr3L:13217690-13217810 ( 90) ACATTGTT 1 chr2R:16408808-16408928 ( 25) ACAATGTT 1 chr2L:427974-428094 ( 77) ACATTGTT 1 chr3R:10573787-10573907 ( 61) ACATTGTT 1 chr2L:14254084-14254204 ( 49) ACAATGTT 1 chr2L:14652103-14652223 ( 58) ACATTGTT 1 chr2R:7206829-7206949 ( 68) ACAATGTT 1 chr3R:31939761-31939881 ( 25) ACATTGTT 1 chr2L:5502117-5502237 ( 69) ACAATGTT 1 chr3L:544892-545012 ( 75) ACAATGTT 1 chr3L:2488803-2488923 ( 83) ACATTGTT 1 chr2L:8987325-8987445 ( 62) ACATTGTT 1 chr2R:18582450-18582570 ( 53) ACAATGTT 1 chr2L:1888835-1888955 ( 54) ACATTGTT 1 chr3L:30281-30401 ( 63) ACAATGTT 1 chr2R:18267879-18267999 ( 75) ACAATGTT 1 chr3L:16016500-16016620 ( 37) ACAATGTT 1 chr2L:2425932-2426052 ( 59) ACATTGTT 1 chrX:11548416-11548536 ( 65) ACATTGTT 1 chr2R:7303586-7303706 ( 56) ACATTGTT 1 chrX:17393445-17393565 ( 67) ACAATGTT 1 chr3L:620023-620143 ( 35) ACAATGTT 1 chr3L:16215550-16215670 ( 51) ACAATGTT 1 chr3R:21348491-21348611 ( 52) ACAATGTT 1 chr3L:29797-29917 ( 54) ACAATGTT 1 chr2L:381809-381929 ( 105) ACAATGTT 1 chr3L:1699917-1700037 ( 46) ACAATGTT 1 chr2R:7587649-7587769 ( 18) ACATTGTT 1 chr3L:50934-51054 ( 44) ACATTGTT 1 chr3L:1118580-1118700 ( 41) ACAATGTT 1 chr3L:1120264-1120384 ( 61) ACAATGTT 1 chr3L:14376002-14376122 ( 65) ACAATGTT 1 chr3L:1376485-1376605 ( 84) ACAATGTT 1 chr3L:11472527-11472647 ( 43) ACAATGTT 1 chr3R:30844575-30844695 ( 49) ACATTGTT 1 chr3R:26485605-26485725 ( 61) ACATTGTT 1 chr2R:19964703-19964823 ( 78) ACATTGTT 1 chr3R:22183078-22183198 ( 55) ACATTGTT 1 chr3R:16541432-16541552 ( 47) ACAATGTT 1 chr2L:698197-698317 ( 64) ACAATGTT 1 chr2L:672440-672560 ( 33) ACATTGTT 1 chr3R:29000140-29000260 ( 81) ACATTGTT 1 chrX:19010650-19010770 ( 77) ACAATGTT 1 chr3L:10459215-10459335 ( 64) ACAATGTT 1 chr2R:16717099-16717219 ( 67) ACAATGTT 1 chr3L:10375758-10375878 ( 77) ACATTGTT 1 chr3L:1205997-1206117 ( 58) ACATTGTA 1 chr3R:14497209-14497329 ( 27) ACATTGTA 1 chr2L:17376185-17376305 ( 50) ACATTGTA 1 chr3R:22195160-22195280 ( 60) ACATTGTA 1 chrX:19473267-19473387 ( 83) ACAATGTA 1 chr2R:20564490-20564610 ( 62) ACATTGTA 1 chr3R:7749649-7749769 ( 41) ACAATGTA 1 chr3R:7961523-7961643 ( 41) ACATTGTA 1 chr3L:18036198-18036318 ( 59) ACAATGTA 1 chr3R:26483860-26483980 ( 91) ACATTGTA 1 chr3L:17491766-17491886 ( 65) ACAATGTA 1 chr3L:17588810-17588930 ( 64) ACAATGTA 1 chr2R:10582873-10582993 ( 41) ACAATGTA 1 chrX:19296006-19296126 ( 80) ACAATGTA 1 chr3L:11405501-11405621 ( 65) ACATTGTA 1 chr2R:20183258-20183378 ( 21) ACATTGTA 1 chr3R:5594976-5595096 ( 20) ACATTGTA 1 chr3R:10686420-10686540 ( 17) ACAATGTA 1 chr2L:7967035-7967155 ( 96) ACAATGTA 1 chr2R:15918059-15918179 ( 64) ACATTGTA 1 chr3L:10975238-10975358 ( 72) ACATTGTA 1 chr2R:12533208-12533328 ( 48) ACAATGTA 1 chr3L:21524609-21524729 ( 72) ACAATGTA 1 chr3R:29210191-29210311 ( 49) ACAATGTA 1 chr2R:18237329-18237449 ( 58) ACAATGTA 1 chr3L:3447029-3447149 ( 65) ACAATGTA 1 chrX:8466868-8466988 ( 77) ACATTGTA 1 chr3R:7118704-7118824 ( 66) ACATTGTA 1 chr3L:6396451-6396571 ( 38) ACATTGTA 1 chr2R:6522425-6522545 ( 44) ACAATGTA 1 chr2L:14521638-14521758 ( 100) ACAATGTA 1 chr2R:5749187-5749307 ( 32) ACAATGTA 1 chr2R:16198281-16198401 ( 35) ACATTGTA 1 chr2R:20179606-20179726 ( 59) ACATTGTA 1 chr3R:19077995-19078115 ( 59) ACATTGTA 1 chr3L:16213352-16213472 ( 61) ACAATGTA 1 chr3L:12461094-12461214 ( 36) ACAAAGTT 1 chrX:12716894-12717014 ( 56) ACAAAGTT 1 chr3R:31297642-31297762 ( 62) ACAAAGTT 1 chr3L:3667366-3667486 ( 31) ACAAAGTT 1 chr2L:7114769-7114889 ( 53) ACAAAGTT 1 chrX:12023302-12023422 ( 51) ACATAGTT 1 chr2L:7901999-7902119 ( 42) ACAAAGTT 1 chr2R:22996178-22996298 ( 32) ACAAAGTT 1 chr3R:21650676-21650796 ( 74) ACAAAGTT 1 chr2R:7430537-7430657 ( 73) ACATAGTT 1 chr3L:8382624-8382744 ( 87) ACAAAGTT 1 chr3R:13934068-13934188 ( 62) ACAAAGTT 1 chr3R:21645869-21645989 ( 56) ACAAAGTT 1 chr2L:14682615-14682735 ( 59) ACAAAGTT 1 chr3R:17709762-17709882 ( 52) ACAAAGTT 1 chr3R:15807445-15807565 ( 72) ACAAAGTT 1 chr2R:24252190-24252310 ( 23) ACAAAGTT 1 chr2L:20371258-20371378 ( 46) ACAAAGTT 1 chr2L:5748708-5748828 ( 68) ACAAAGTT 1 chr3L:8882315-8882435 ( 58) ACAAAGTT 1 chr3L:20653538-20653658 ( 92) ACAAAGTT 1 chr3L:8652335-8652455 ( 61) ACAAAGTT 1 chr2R:11837108-11837228 ( 64) ACAAAGTT 1 chr3L:10751453-10751573 ( 56) ACAAAGTT 1 chr2R:12694393-12694513 ( 42) ACAAAGTT 1 chr3R:10532572-10532692 ( 111) ACAAAGTT 1 chr3R:7957147-7957267 ( 51) ACAAAGTT 1 chr3R:19091096-19091216 ( 59) ACTTTGTT 1 chr3L:10717074-10717194 ( 57) ACTTTGTT 1 chr3L:21883259-21883379 ( 55) ACTTTGTT 1 chr3R:8926696-8926816 ( 104) ACTTTGTT 1 chr3L:549700-549820 ( 29) ACTTTGTT 1 chr2R:8181621-8181741 ( 67) ACTTTGTT 1 chr3R:17110727-17110847 ( 61) ACTTTGTT 1 chr3L:1754401-1754521 ( 31) ACTTTGTT 1 chr2L:13431058-13431178 ( 42) ACTTTGTT 1 chr2L:14608397-14608517 ( 87) ACTTTGTT 1 chr2L:21063278-21063398 ( 76) ACTTTGTT 1 chr3L:11279545-11279665 ( 66) ACTTTGTT 1 chr2R:15225259-15225379 ( 70) ACTATGTT 1 chrX:15029997-15030117 ( 74) ACTTTGTT 1 chr2L:1930952-1931072 ( 12) ACTTTGTT 1 chr3R:23132438-23132558 ( 55) ACTTTGTT 1 chr3L:22848894-22849014 ( 35) ACTTTGTT 1 chr3L:565724-565844 ( 65) ACTTTGTT 1 chr3L:16869303-16869423 ( 50) ACTTTGTT 1 chr3L:4352148-4352268 ( 76) ACTATGTT 1 chr3R:24975184-24975304 ( 98) ACTTTGTT 1 chr3R:8328106-8328226 ( 39) ACTTTGTT 1 chr3L:16437410-16437530 ( 62) ACTTTGTT 1 chr3L:10388589-10388709 ( 113) ACAAAGTA 1 chr2R:7753245-7753365 ( 61) ACAAAGTA 1 chr3L:7743891-7744011 ( 84) ACAAAGTA 1 chr2R:8747915-8748035 ( 26) ACAAAGTA 1 chr2R:17838168-17838288 ( 61) ACAAAGTA 1 chr2R:8038115-8038235 ( 43) ACAAAGTA 1 chr3R:13307070-13307190 ( 31) ACAAAGTA 1 chr3L:3125491-3125611 ( 71) ACAAAGTA 1 chr3R:21780319-21780439 ( 85) ACAAAGTA 1 chr3L:16478747-16478867 ( 33) ACAAAGTA 1 chr2L:4212085-4212205 ( 92) ACAAAGTA 1 chr3L:232406-232526 ( 37) ACAAAGTA 1 chr3L:2818923-2819043 ( 43) ACAAAGTA 1 chr2R:20578128-20578248 ( 52) ACAAAGTA 1 chr3R:30426778-30426898 ( 72) ACAAAGTA 1 chr2R:16308030-16308150 ( 75) ACAAAGTA 1 chr3R:7224084-7224204 ( 92) ACTTTGTA 1 chr2R:6712168-6712288 ( 37) ACTTTGTA 1 chr3R:30289425-30289545 ( 65) ACTTTGTA 1 chr2R:6158245-6158365 ( 64) ACTTTGTA 1 chr3R:9160677-9160797 ( 82) ACTTTGTA 1 chr3L:16048881-16049001 ( 18) ACTTTGTA 1 chr3L:2171253-2171373 ( 105) ACTTTGTA 1 chr3L:719305-719425 ( 50) ACTTTGTA 1 chr3L:17403513-17403633 ( 71) ACTTTGTA 1 chr2L:15846607-15846727 ( 75) ACTTTGTA 1 chr2L:14351547-14351667 ( 37) ACTTTGTA 1 chr3L:21711500-21711620 ( 92) ACTTTGTA 1 chr2R:19154427-19154547 ( 75) ACTTTGTA 1 chrX:4477440-4477560 ( 54) ACTTTGTA 1 chr3R:16542677-16542797 ( 25) ACTTTGTA 1 chrX:21378483-21378603 ( 37) ACTTTGTA 1 chr2L:19111878-19111998 ( 109) ACATTGTC 1 chr2L:717514-717634 ( 24) ACATTGTC 1 chr2R:19936985-19937105 ( 30) ACAATGTC 1 chr2L:440397-440517 ( 44) ACATTGTC 1 chr2L:7574903-7575023 ( 61) ACATTGTC 1 chr2L:11027358-11027478 ( 92) ACAATGTC 1 chr3R:5033436-5033556 ( 41) ACAATGTC 1 chr2L:647731-647851 ( 61) ACATTGTC 1 chr3L:8045102-8045222 ( 75) ACATTGTG 1 chr3R:11902728-11902848 ( 65) ACATTGTG 1 chr2L:5974868-5974988 ( 61) ACAATGTG 1 chr3L:1121795-1121915 ( 63) ACATTGTG 1 chr3L:4271075-4271195 ( 51) ACATTGTG 1 chr2L:19071808-19071928 ( 65) ACTTAGTT 1 chr2R:17834127-17834247 ( 52) ACAAAGTC 1 chr2L:225422-225542 ( 59) ACAAAGTC 1 chr3R:13918875-13918995 ( 43) ACAAAGTC 1 chr3L:7369134-7369254 ( 91) ACTTTGTC 1 chr3L:623017-623137 ( 52) ACAAAGTG 1 chr2L:18331319-18331439 ( 25) ACTTTGTC 1 chr2R:20152078-20152198 ( 54) ACAAAGTG 1 chr3R:27685190-27685310 ( 42) ACAAAGTG 1 chr3L:16214947-16215067 ( 66) ACATAGTG 1 chr2R:24026697-24026817 ( 87) ACAAAGTG 1 chr3R:15804817-15804937 ( 39) ACAAAGTG 1 chr3L:14495458-14495578 ( 68) ACAATCTT 1 chr3L:10382008-10382128 ( 17) ACATTCTT 1 chrX:20500583-20500703 ( 88) ACAATGAT 1 chr3R:13853554-13853674 ( 61) ACCTTGTT 1 chr3L:15753782-15753902 ( 28) ACATTTTT 1 chr2R:11572951-11573071 ( 7) ACATTCTA 1 chr4:522910-523030 ( 56) ACAGTGTT 1 chr3R:7969097-7969217 ( 50) ACAAACTT 1 chr3L:13500445-13500565 ( 59) ACAAACTT 1 chr3L:12449311-12449431 ( 69) AAAATGTT 1 chr3L:14497591-14497711 ( 78) AAAATGTT 1 chr2L:5436095-5436215 ( 42) ACAAGGTT 1 chr2L:3351533-3351653 ( 30) ACAAAGAT 1 chr2R:15918260-15918380 ( 79) ACATAGAT 1 chr2L:16561471-16561591 ( 94) CCATTGTT 1 chr2R:11763029-11763149 ( 89) ACAAATTT 1 chr2R:7587881-7588001 ( 8) ACTTTTTT 1 chr2R:23718174-23718294 ( 59) ACAAAGAA 1 chr3R:31285922-31286042 ( 33) ACCAAGTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.16329 E= 1.4e-247 183 -571 -1452 -1452 -504 215 -1452 -1452 153 -471 -1452 -53 89 -1452 -577 85 -13 -1452 -577 148 -1452 -339 206 -437 -404 -1452 -1452 189 11 -201 -231 117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 235 E= 1.4e-247 0.995745 0.004255 0.000000 0.000000 0.008511 0.991489 0.000000 0.000000 0.808511 0.008511 0.000000 0.182979 0.519149 0.000000 0.004255 0.476596 0.255319 0.000000 0.004255 0.740426 0.000000 0.021277 0.965957 0.012766 0.017021 0.000000 0.000000 0.982979 0.302128 0.055319 0.046809 0.595745 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAWTGTW MEME-1 regular expression -------------------------------------------------------------------------------- ACA[AT][TA]GT[TA] -------------------------------------------------------------------------------- Time 7.34 secs. ******************************************************************************** ******************************************************************************** MOTIF CAAMWRCA MEME-2 width = 8 sites = 60 llr = 475 E-value = 1.7e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :a7454:a pos.-specific C a::61:a: probability G ::3:16:: matrix T ::::3::: bits 2.2 * * 1.9 * * 1.7 ** ** 1.5 ** ** Relative 1.3 ** ** Entropy 1.1 **** *** (11.4 bits) 0.9 **** *** 0.6 **** *** 0.4 **** *** 0.2 ******** 0.0 -------- Multilevel CAACAGCA consensus GATA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:684237-684357 72 1.58e-05 Gcaacgccat caacagca acaacaccaa chr2R:7753245-7753365 11 1.58e-05 acagaaagtg caacagca acaacttcaa chr2R:17838168-17838288 6 1.58e-05 agcaa caacagca ATGCATGCTG chr3L:719305-719425 62 1.58e-05 tttgtagcag caacagca ccaacagAGT chrX:19296006-19296126 27 1.58e-05 CAGATTTGTG CAACAGCA AACAGCAAGA chrX:17320424-17320544 11 1.58e-05 aagacagcag caacagca gcaacagcag chr3L:11405501-11405621 30 1.58e-05 gcagcagcaa caacagca gcagcagcCA chr3L:51792-51912 83 3.08e-05 GGGCATAATT CAACTGCA ACATTGTTGC chr2L:7114769-7114889 109 3.08e-05 AATGCTTGCA CAACTGCA GAAT chr2L:717514-717634 93 3.08e-05 TCATCATCGA CAACTGCA AACAACATTC chrX:3370620-3370740 105 3.08e-05 AGCATAACTG CAACTGCA AGGCCCCG chr2L:14254084-14254204 102 3.08e-05 TCAGCTGGtg caactgca actggagctg chr2L:14682615-14682735 23 3.08e-05 CACAGACAGG CAACTGCA GACAGACAAT chr2R:5749187-5749307 24 3.08e-05 actccgactg caactgca acAATGTACA chr3R:22195160-22195280 109 6.97e-05 AAATAAAAGG CAacaaca cagc chr3L:10717074-10717194 80 6.97e-05 TCACGCCCAT CAAAAGCA TTGGGCATTC chr3R:21608386-21608506 32 6.97e-05 AACAATGTTG CAAAAGCA AACATCAGCA chr3L:17491766-17491886 54 6.97e-05 GCAGCATCCG CAACAACA ACCACAATGT chr3R:21649206-21649326 7 6.97e-05 AAACAA CAACAACA ATCGTCCATA chr2L:7574903-7575023 10 6.97e-05 caacaacaa caacaaca GTAGCAAaga chr2L:7967035-7967155 46 6.97e-05 ATATGCACGA CAACAACA ATGGTGAAAG chr3L:30002-30122 83 6.97e-05 ATTTAAAAAA CAAAAGCA AATTTAAAAC chr3L:29797-29917 71 6.97e-05 TGCAGAAGAG CAAAAGCA TATCGTGCCG chr2L:647731-647851 9 6.97e-05 AAAGTGCC CAAAAGCA GGATGGTGAA chr2R:9931544-9931664 78 8.28e-05 GAACCGAACC CAGCAGCA AACGATCCAT chr3L:1084950-1085070 12 8.28e-05 ATTCGCAGAA CAGCAGCA ACATCGTAAA chr2R:10582873-10582993 59 8.28e-05 gcaaccgaaa cagcagca gtgggagcaa chr3R:31939761-31939881 86 8.28e-05 GTGCAATTTG CAGCAGCA ACATCCCACA chrX:20500583-20500703 41 1.20e-04 ATGCAATTTG CAAATGCA GGAGAAGTGC chrX:3686638-3686758 74 1.20e-04 CCATGCTACC CAAATGCA CAGCCTCTTC chrX:10820916-10821036 4 1.20e-04 GTT CAACTACA GAGAAGCCTC chr2R:7206829-7206949 95 1.20e-04 TCGCTGCACG CAAATGCA CTTTCCATTT chr2R:12694393-12694513 95 1.20e-04 AATATGCATC CAAATGCA CCCATCCACA chr3L:16437410-16437530 35 1.20e-04 GTCCTATGGC CAAATGCA ACCATTTGGG chr4:522910-523030 1 1.32e-04 . CAGCTGCA AATTCAGTCG chr3L:549700-549820 57 1.32e-04 TACTGATAGC CAGCTGCA CGTATACTTT chr2R:11837108-11837228 9 1.32e-04 AGTCTCCT CAGCTGCA GCGACCGCTA chr3L:2171253-2171373 12 1.69e-04 GTTGACATAA CAAAAACA TGAATAAGCA chr2R:6522425-6522545 19 1.69e-04 AGGCTGCCAG CAAAAACA GGCAAACTAA chr3L:11472527-11472647 59 1.69e-04 TTGCTTTCAA CAAAAACA CATTCGGGCG chr2R:20578128-20578248 29 1.69e-04 TATCcaaaaa caaaaaca gaaacaagaa chr2R:16717099-16717219 54 1.69e-04 TCCCCCCGCC CAAAAACA TACATACAAT chr3L:1205997-1206117 73 2.14e-04 GTAAGATGGG CAACCGCA TTGCATCCAG chrX:12716894-12717014 67 2.14e-04 caaaGTTGCA CAGCAACA ACCACAGGCT chrX:9738793-9738913 76 2.14e-04 TTAGGCCCGC CAGCAACA TGCAACATGA chr3R:11902728-11902848 40 2.14e-04 TGATGACAAC CAGCAACA AAAAGAGGCA chr2R:15918059-15918179 89 2.37e-04 GTAGCTCCAA CAAATACA ACCTCGTACA chr2R:16408808-16408928 5 2.99e-04 ACAC CAACGACA GGGGTTAAGG chr3R:10686420-10686540 108 2.99e-04 TTagcaacat caacgaca acagc chr3L:7743891-7744011 11 3.61e-04 TTTTTTTGGA CAAACGCA TTAACTGGTT chr3R:7961523-7961643 5 3.61e-04 ATTT CAGAAACA ACTCGAAGGC chr3L:2488803-2488923 42 3.61e-04 TCGCACTTCG CAGCGGCA ATTCGAGTTT chr2R:24252190-24252310 32 3.61e-04 AACAAAGTTG CAGCGGCA TCAGCGAAGA chr2R:15225259-15225379 10 3.72e-04 AGCGGCGCG CAGCCGCA AACGCCGGGC chr3R:29000140-29000260 96 3.72e-04 GTTTAAGTAT CAGCCGCA GATACTTCTC chr2R:11184905-11185025 18 3.90e-04 CGCCGGGCAG CAGATACA TATACAAGCG chr3R:7967023-7967143 74 3.90e-04 AGACAGCGGA CAGATACA CGGACATTCA chr2L:14351547-14351667 29 4.10e-04 GTAGCTTTTG CAAAGACA ACTTTGTAAG chr3L:30281-30401 81 4.10e-04 GCAACTTCAA CAAAGACA ACGATGGCGG chr3R:21645869-21645989 17 4.56e-04 GGTTCGAAGG CAAACACA AATGAACAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:684237-684357 1.6e-05 71_[+2]_41 chr2R:7753245-7753365 1.6e-05 10_[+2]_102 chr2R:17838168-17838288 1.6e-05 5_[+2]_107 chr3L:719305-719425 1.6e-05 61_[+2]_51 chrX:19296006-19296126 1.6e-05 26_[+2]_86 chrX:17320424-17320544 1.6e-05 10_[+2]_102 chr3L:11405501-11405621 1.6e-05 29_[+2]_83 chr3L:51792-51912 3.1e-05 82_[+2]_30 chr2L:7114769-7114889 3.1e-05 108_[+2]_4 chr2L:717514-717634 3.1e-05 92_[+2]_20 chrX:3370620-3370740 3.1e-05 104_[+2]_8 chr2L:14254084-14254204 3.1e-05 101_[+2]_11 chr2L:14682615-14682735 3.1e-05 22_[+2]_90 chr2R:5749187-5749307 3.1e-05 23_[+2]_89 chr3R:22195160-22195280 7e-05 108_[+2]_4 chr3L:10717074-10717194 7e-05 79_[+2]_33 chr3R:21608386-21608506 7e-05 31_[+2]_81 chr3L:17491766-17491886 7e-05 53_[+2]_59 chr3R:21649206-21649326 7e-05 6_[+2]_106 chr2L:7574903-7575023 7e-05 9_[+2]_103 chr2L:7967035-7967155 7e-05 45_[+2]_67 chr3L:30002-30122 7e-05 82_[+2]_30 chr3L:29797-29917 7e-05 70_[+2]_42 chr2L:647731-647851 7e-05 8_[+2]_104 chr2R:9931544-9931664 8.3e-05 77_[+2]_35 chr3L:1084950-1085070 8.3e-05 11_[+2]_101 chr2R:10582873-10582993 8.3e-05 58_[+2]_54 chr3R:31939761-31939881 8.3e-05 85_[+2]_27 chrX:20500583-20500703 0.00012 40_[+2]_72 chrX:3686638-3686758 0.00012 73_[+2]_39 chrX:10820916-10821036 0.00012 3_[+2]_109 chr2R:7206829-7206949 0.00012 94_[+2]_18 chr2R:12694393-12694513 0.00012 94_[+2]_18 chr3L:16437410-16437530 0.00012 34_[+2]_78 chr4:522910-523030 0.00013 [+2]_112 chr3L:549700-549820 0.00013 56_[+2]_56 chr2R:11837108-11837228 0.00013 8_[+2]_104 chr3L:2171253-2171373 0.00017 11_[+2]_101 chr2R:6522425-6522545 0.00017 18_[+2]_94 chr3L:11472527-11472647 0.00017 58_[+2]_54 chr2R:20578128-20578248 0.00017 28_[+2]_84 chr2R:16717099-16717219 0.00017 53_[+2]_59 chr3L:1205997-1206117 0.00021 72_[+2]_40 chrX:12716894-12717014 0.00021 66_[+2]_46 chrX:9738793-9738913 0.00021 75_[+2]_37 chr3R:11902728-11902848 0.00021 39_[+2]_73 chr2R:15918059-15918179 0.00024 88_[+2]_24 chr2R:16408808-16408928 0.0003 4_[+2]_108 chr3R:10686420-10686540 0.0003 107_[+2]_5 chr3L:7743891-7744011 0.00036 10_[+2]_102 chr3R:7961523-7961643 0.00036 4_[+2]_108 chr3L:2488803-2488923 0.00036 41_[+2]_71 chr2R:24252190-24252310 0.00036 31_[+2]_81 chr2R:15225259-15225379 0.00037 9_[+2]_103 chr3R:29000140-29000260 0.00037 95_[+2]_17 chr2R:11184905-11185025 0.00039 17_[+2]_95 chr3R:7967023-7967143 0.00039 73_[+2]_39 chr2L:14351547-14351667 0.00041 28_[+2]_84 chr3L:30281-30401 0.00041 80_[+2]_32 chr3R:21645869-21645989 0.00046 16_[+2]_96 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAAMWRCA width=8 seqs=60 chr2L:684237-684357 ( 72) CAACAGCA 1 chr2R:7753245-7753365 ( 11) CAACAGCA 1 chr2R:17838168-17838288 ( 6) CAACAGCA 1 chr3L:719305-719425 ( 62) CAACAGCA 1 chrX:19296006-19296126 ( 27) CAACAGCA 1 chrX:17320424-17320544 ( 11) CAACAGCA 1 chr3L:11405501-11405621 ( 30) CAACAGCA 1 chr3L:51792-51912 ( 83) CAACTGCA 1 chr2L:7114769-7114889 ( 109) CAACTGCA 1 chr2L:717514-717634 ( 93) CAACTGCA 1 chrX:3370620-3370740 ( 105) CAACTGCA 1 chr2L:14254084-14254204 ( 102) CAACTGCA 1 chr2L:14682615-14682735 ( 23) CAACTGCA 1 chr2R:5749187-5749307 ( 24) CAACTGCA 1 chr3R:22195160-22195280 ( 109) CAACAACA 1 chr3L:10717074-10717194 ( 80) CAAAAGCA 1 chr3R:21608386-21608506 ( 32) CAAAAGCA 1 chr3L:17491766-17491886 ( 54) CAACAACA 1 chr3R:21649206-21649326 ( 7) CAACAACA 1 chr2L:7574903-7575023 ( 10) CAACAACA 1 chr2L:7967035-7967155 ( 46) CAACAACA 1 chr3L:30002-30122 ( 83) CAAAAGCA 1 chr3L:29797-29917 ( 71) CAAAAGCA 1 chr2L:647731-647851 ( 9) CAAAAGCA 1 chr2R:9931544-9931664 ( 78) CAGCAGCA 1 chr3L:1084950-1085070 ( 12) CAGCAGCA 1 chr2R:10582873-10582993 ( 59) CAGCAGCA 1 chr3R:31939761-31939881 ( 86) CAGCAGCA 1 chrX:20500583-20500703 ( 41) CAAATGCA 1 chrX:3686638-3686758 ( 74) CAAATGCA 1 chrX:10820916-10821036 ( 4) CAACTACA 1 chr2R:7206829-7206949 ( 95) CAAATGCA 1 chr2R:12694393-12694513 ( 95) CAAATGCA 1 chr3L:16437410-16437530 ( 35) CAAATGCA 1 chr4:522910-523030 ( 1) CAGCTGCA 1 chr3L:549700-549820 ( 57) CAGCTGCA 1 chr2R:11837108-11837228 ( 9) CAGCTGCA 1 chr3L:2171253-2171373 ( 12) CAAAAACA 1 chr2R:6522425-6522545 ( 19) CAAAAACA 1 chr3L:11472527-11472647 ( 59) CAAAAACA 1 chr2R:20578128-20578248 ( 29) CAAAAACA 1 chr2R:16717099-16717219 ( 54) CAAAAACA 1 chr3L:1205997-1206117 ( 73) CAACCGCA 1 chrX:12716894-12717014 ( 67) CAGCAACA 1 chrX:9738793-9738913 ( 76) CAGCAACA 1 chr3R:11902728-11902848 ( 40) CAGCAACA 1 chr2R:15918059-15918179 ( 89) CAAATACA 1 chr2R:16408808-16408928 ( 5) CAACGACA 1 chr3R:10686420-10686540 ( 108) CAACGACA 1 chr3L:7743891-7744011 ( 11) CAAACGCA 1 chr3R:7961523-7961643 ( 5) CAGAAACA 1 chr3L:2488803-2488923 ( 42) CAGCGGCA 1 chr2R:24252190-24252310 ( 32) CAGCGGCA 1 chr2R:15225259-15225379 ( 10) CAGCCGCA 1 chr3R:29000140-29000260 ( 96) CAGCCGCA 1 chr2R:11184905-11185025 ( 18) CAGATACA 1 chr3R:7967023-7967143 ( 74) CAGATACA 1 chr2L:14351547-14351667 ( 29) CAAAGACA 1 chr3L:30281-30401 ( 81) CAAAGACA 1 chr3R:21645869-21645989 ( 17) CAAACACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5834 E= 1.7e-006 -1255 216 -1255 -1255 184 -1255 -1255 -1255 136 -1255 29 -1255 45 147 -1255 -1255 84 -142 -121 26 45 -1255 141 -1255 -1255 216 -1255 -1255 184 -1255 -1255 -1255 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 60 E= 1.7e-006 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.716667 0.000000 0.283333 0.000000 0.383333 0.616667 0.000000 0.000000 0.500000 0.083333 0.100000 0.316667 0.383333 0.000000 0.616667 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAMWRCA MEME-2 regular expression -------------------------------------------------------------------------------- CA[AG][CA][AT][GA]CA -------------------------------------------------------------------------------- Time 13.29 secs. ******************************************************************************** ******************************************************************************** MOTIF TGYTGYTG MEME-3 width = 8 sites = 29 llr = 256 E-value = 2.8e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::2: pos.-specific C ::6::4:: probability G :a::8::a matrix T a:4a268: bits 2.2 * * 1.9 ** * * 1.7 ** * * 1.5 ** ** * Relative 1.3 ** ** * Entropy 1.1 ******** (12.7 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGCTGTTG consensus T CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:30289425-30289545 38 1.37e-05 CGGGCTCTGT TGCTGTTG CACATGACCG chrX:9738793-9738913 96 1.37e-05 CAACATGAGT TGCTGTTG CTTGTGCTGC chr2L:717514-717634 51 1.37e-05 GCCGCGTTTC TGCTGTTG TTGTCGTCGT chr3L:8045102-8045222 100 1.37e-05 GCAttttgtc tgctgttg ttttgttttg chr2L:20371258-20371378 92 1.37e-05 cgttgcaggt tgctgttg cagatgtact chr3L:16213352-16213472 41 1.37e-05 atgttgttgc tgctgttg cagattgctg chr2R:20152078-20152198 104 2.53e-05 cgttggttgt tgctgctg ccgctgatg chr2R:18267879-18267999 112 2.53e-05 cagcctctga tgctgctg c chr3L:565724-565844 93 2.53e-05 TTGTCGCTGC TGCTGCTG TTTTTCTGCT chr3L:10388589-10388709 8 4.16e-05 ttcttgt tgttgttg actgtAATCG chr3L:14611772-14611892 99 4.16e-05 GCGTGGTTCT TGTTGTTG GCCCTGTGGC chr3L:7743891-7744011 34 4.16e-05 TGGTTTTCAG TGTTGTTG TGCGTGCCGT chrX:3686638-3686758 17 4.16e-05 GCAATTGTTG TGTTGTTG CTGCGACGGC chr2R:7587881-7588001 104 4.16e-05 GGCAGGCAGA TGTTGTTG CCGCAGCTG chr3R:16541432-16541552 13 4.16e-05 ctctagttgt tgttgttg gtgttgtGGC chr3L:10717074-10717194 43 5.53e-05 CTTTACCACT TGTTGCTG CTCTTGACTT chrX:17320424-17320544 81 5.53e-05 cagTTGCTGA TGTTGCTG GTTCTGCTGC chr2L:427974-428094 103 6.99e-05 CGTTGGAGGT TGCTGTAG CTGCTTCTGC chr3R:7174908-7175028 103 8.21e-05 GGACAACACA TGCTGCag caggaggatc chrX:18671937-18672057 69 8.21e-05 ACATTGTTGC TGCTGCAG TTGAGGTGTA chr3L:12449311-12449431 2 8.21e-05 T TGCTGCAG CGGCTTACAA chr3R:21348491-21348611 25 8.21e-05 GAAGCTGCGG TGCTGCAG CGACGCTGAC chr3R:7224084-7224204 80 9.77e-05 AAAGACGCCC TGCTTTTG TTTTACTTTG chr3R:7749649-7749769 99 9.77e-05 AGCAATGAAA TGCTTTTG TATGCTCCCC chr3L:16215550-16215670 35 9.77e-05 CCCTTTTGTA TGCTTTTG ATAGTGCAAC chr3L:4271075-4271195 19 9.77e-05 GGCTGAACTT TGCTTTTG ATTGCACATG chr2R:15918059-15918179 75 1.15e-04 CATTGTAACT TGTTGTAG CTCCAACAAA chr2L:5974868-5974988 41 1.43e-04 GTAGGGCGCA TGTTGCAG TGTACCAATG chr3L:1120264-1120384 51 1.77e-04 AACAAGTTGC TGTTTCTG CAACAATGTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:30289425-30289545 1.4e-05 37_[+3]_75 chrX:9738793-9738913 1.4e-05 95_[+3]_17 chr2L:717514-717634 1.4e-05 50_[+3]_62 chr3L:8045102-8045222 1.4e-05 99_[+3]_13 chr2L:20371258-20371378 1.4e-05 91_[+3]_21 chr3L:16213352-16213472 1.4e-05 40_[+3]_72 chr2R:20152078-20152198 2.5e-05 103_[+3]_9 chr2R:18267879-18267999 2.5e-05 111_[+3]_1 chr3L:565724-565844 2.5e-05 92_[+3]_20 chr3L:10388589-10388709 4.2e-05 7_[+3]_105 chr3L:14611772-14611892 4.2e-05 98_[+3]_14 chr3L:7743891-7744011 4.2e-05 33_[+3]_79 chrX:3686638-3686758 4.2e-05 16_[+3]_96 chr2R:7587881-7588001 4.2e-05 103_[+3]_9 chr3R:16541432-16541552 4.2e-05 12_[+3]_100 chr3L:10717074-10717194 5.5e-05 42_[+3]_70 chrX:17320424-17320544 5.5e-05 80_[+3]_32 chr2L:427974-428094 7e-05 102_[+3]_10 chr3R:7174908-7175028 8.2e-05 102_[+3]_10 chrX:18671937-18672057 8.2e-05 68_[+3]_44 chr3L:12449311-12449431 8.2e-05 1_[+3]_111 chr3R:21348491-21348611 8.2e-05 24_[+3]_88 chr3R:7224084-7224204 9.8e-05 79_[+3]_33 chr3R:7749649-7749769 9.8e-05 98_[+3]_14 chr3L:16215550-16215670 9.8e-05 34_[+3]_78 chr3L:4271075-4271195 9.8e-05 18_[+3]_94 chr2R:15918059-15918179 0.00011 74_[+3]_38 chr2L:5974868-5974988 0.00014 40_[+3]_72 chr3L:1120264-1120384 0.00018 50_[+3]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGYTGYTG width=8 seqs=29 chr3R:30289425-30289545 ( 38) TGCTGTTG 1 chrX:9738793-9738913 ( 96) TGCTGTTG 1 chr2L:717514-717634 ( 51) TGCTGTTG 1 chr3L:8045102-8045222 ( 100) TGCTGTTG 1 chr2L:20371258-20371378 ( 92) TGCTGTTG 1 chr3L:16213352-16213472 ( 41) TGCTGTTG 1 chr2R:20152078-20152198 ( 104) TGCTGCTG 1 chr2R:18267879-18267999 ( 112) TGCTGCTG 1 chr3L:565724-565844 ( 93) TGCTGCTG 1 chr3L:10388589-10388709 ( 8) TGTTGTTG 1 chr3L:14611772-14611892 ( 99) TGTTGTTG 1 chr3L:7743891-7744011 ( 34) TGTTGTTG 1 chrX:3686638-3686758 ( 17) TGTTGTTG 1 chr2R:7587881-7588001 ( 104) TGTTGTTG 1 chr3R:16541432-16541552 ( 13) TGTTGTTG 1 chr3L:10717074-10717194 ( 43) TGTTGCTG 1 chrX:17320424-17320544 ( 81) TGTTGCTG 1 chr2L:427974-428094 ( 103) TGCTGTAG 1 chr3R:7174908-7175028 ( 103) TGCTGCAG 1 chrX:18671937-18672057 ( 69) TGCTGCAG 1 chr3L:12449311-12449431 ( 2) TGCTGCAG 1 chr3R:21348491-21348611 ( 25) TGCTGCAG 1 chr3R:7224084-7224204 ( 80) TGCTTTTG 1 chr3R:7749649-7749769 ( 99) TGCTTTTG 1 chr3L:16215550-16215670 ( 35) TGCTTTTG 1 chr3L:4271075-4271195 ( 19) TGCTTTTG 1 chr2R:15918059-15918179 ( 75) TGTTGTAG 1 chr2L:5974868-5974988 ( 41) TGTTGCAG 1 chr3L:1120264-1120384 ( 51) TGTTTCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.1765 E= 2.8e+002 -1150 -1150 -1150 192 -1150 -1150 211 -1150 -1150 147 -1150 52 -1150 -1150 -1150 192 -1150 -1150 183 -62 -1150 76 -1150 123 -21 -1150 -1150 152 -1150 -1150 211 -1150 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 29 E= 2.8e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.620690 0.000000 0.379310 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.827586 0.172414 0.000000 0.379310 0.000000 0.620690 0.241379 0.000000 0.000000 0.758621 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGYTGYTG MEME-3 regular expression -------------------------------------------------------------------------------- TG[CT]TG[TC][TA]G -------------------------------------------------------------------------------- Time 19.12 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCCCCTT MEME-4 width = 8 sites = 6 llr = 69 E-value = 6.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C a:aaaa:: probability G :::::::: matrix T :a::::aa bits 2.2 * **** 1.9 ******** 1.7 ******** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (16.6 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCCCCTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:3351533-3351653 15 1.03e-05 gtgtgCAGGT CTCCCCTT AAATGCAACA chr3R:7749649-7749769 111 1.03e-05 CTTTTGTATG CTCCCCTT CT chr2L:440397-440517 80 1.03e-05 AAGCGACATT CTCCCCTT TTGGTGTTAT chr2R:7587649-7587769 60 1.03e-05 GAAGTTCTGG CTCCCCTT TCTCAGATAT chr3R:22183078-22183198 109 1.03e-05 GCGGTGGCTG CTCCCCTT TTTC chr2L:698197-698317 9 1.03e-05 CCGCTGCC CTCCCCTT TATTTTTCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:3351533-3351653 1e-05 14_[+4]_98 chr3R:7749649-7749769 1e-05 110_[+4]_2 chr2L:440397-440517 1e-05 79_[+4]_33 chr2R:7587649-7587769 1e-05 59_[+4]_53 chr3R:22183078-22183198 1e-05 108_[+4]_4 chr2L:698197-698317 1e-05 8_[+4]_104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCCCCTT width=8 seqs=6 chr2L:3351533-3351653 ( 15) CTCCCCTT 1 chr3R:7749649-7749769 ( 111) CTCCCCTT 1 chr2L:440397-440517 ( 80) CTCCCCTT 1 chr2R:7587649-7587769 ( 60) CTCCCCTT 1 chr3R:22183078-22183198 ( 109) CTCCCCTT 1 chr2L:698197-698317 ( 9) CTCCCCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.6482 E= 6.5e+003 -923 216 -923 -923 -923 -923 -923 192 -923 216 -923 -923 -923 216 -923 -923 -923 216 -923 -923 -923 216 -923 -923 -923 -923 -923 192 -923 -923 -923 192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 6 E= 6.5e+003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCCCTT MEME-4 regular expression -------------------------------------------------------------------------------- CTCCCCTT -------------------------------------------------------------------------------- Time 24.89 secs. ******************************************************************************** ******************************************************************************** MOTIF CCACCSCC MEME-5 width = 8 sites = 2 llr = 22 E-value = 2.5e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::a::::: pos.-specific C aa:aa5aa probability G :::::5:: matrix T :::::::: bits 2.2 ** ** ** 1.9 ** ** ** 1.7 ***** ** 1.5 ***** ** Relative 1.3 ***** ** Entropy 1.1 ******** (16.0 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCACCCCC consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:14497209-14497329 56 7.68e-06 GGAATGGACA CCACCCCC CCGGCATCTA chr3L:544892-545012 63 1.57e-05 ATGACAAAGG CCACCGCC CATTACAATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:14497209-14497329 7.7e-06 55_[+5]_57 chr3L:544892-545012 1.6e-05 62_[+5]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCACCSCC width=8 seqs=2 chr3R:14497209-14497329 ( 56) CCACCCCC 1 chr3L:544892-545012 ( 63) CCACCGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.7859 E= 2.5e+005 -765 216 -765 -765 -765 216 -765 -765 183 -765 -765 -765 -765 216 -765 -765 -765 216 -765 -765 -765 116 110 -765 -765 216 -765 -765 -765 216 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.5e+005 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCSCC MEME-5 regular expression -------------------------------------------------------------------------------- CCACC[CG]CC -------------------------------------------------------------------------------- Time 31.26 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:16213352-16213472 1.11e-03 40_[+3(1.37e-05)]_12_[+1(8.46e-05)]_\ 52 chr3L:10375758-10375878 5.91e-02 76_[+1(4.11e-05)]_36 chr3R:7957147-7957267 1.95e-01 120 chr3R:19077995-19078115 3.49e-01 58_[+1(8.46e-05)]_54 chr2L:647731-647851 1.69e-02 8_[+2(6.97e-05)]_104 chr2R:16308030-16308150 4.28e-01 120 chrX:21378483-21378603 2.22e-01 120 chr2L:16267289-16267409 6.49e-01 120 chr2R:16717099-16717219 4.82e-04 45_[+5(7.47e-05)]_13_[+1(4.11e-05)]_\ 46 chr3L:13500445-13500565 3.46e-01 120 chr3L:10459215-10459335 3.20e-02 63_[+1(4.11e-05)]_49 chr3R:10532572-10532692 2.80e-01 120 chr3R:15804817-15804937 1.16e-01 120 chr3L:4271075-4271195 6.94e-02 18_[+3(9.77e-05)]_94 chr3R:30426778-30426898 2.56e-01 120 chr3L:16437410-16437530 1.67e-02 120 chr2R:11572951-11573071 8.49e-01 120 chr3L:1121795-1121915 3.49e-02 120 chr2R:20578128-20578248 2.75e-02 120 chrX:19010650-19010770 8.87e-03 76_[+1(4.11e-05)]_36 chr3R:29000140-29000260 1.58e-02 80_[+1(4.11e-05)]_32 chr2L:672440-672560 9.44e-04 32_[+1(4.11e-05)]_80 chr2R:20179606-20179726 1.16e-01 58_[+1(8.46e-05)]_54 chr2L:698197-698317 1.21e-05 8_[+4(1.03e-05)]_47_[+1(4.11e-05)]_\ 49 chr2R:16198281-16198401 1.02e-01 34_[+1(8.46e-05)]_78 chr2R:12694393-12694513 2.26e-02 120 chr3L:10751453-10751573 6.95e-02 120 chr3R:16541432-16541552 1.42e-03 9_[+3(4.16e-05)]_29_[+1(4.11e-05)]_\ 66 chr2R:5749187-5749307 1.37e-02 23_[+2(3.08e-05)]_[+1(8.46e-05)]_81 chr3R:8328106-8328226 2.66e-01 120 chr3R:22183078-22183198 4.71e-05 54_[+1(4.11e-05)]_46_[+4(1.03e-05)]_\ 4 chr3L:2818923-2819043 3.23e-02 120 chr2R:19964703-19964823 1.27e-01 77_[+1(4.11e-05)]_35 chr3R:16542677-16542797 3.41e-02 61_[+5(7.47e-05)]_51 chr3R:26485605-26485725 2.81e-03 60_[+1(4.11e-05)]_52 chr3L:232406-232526 2.39e-01 120 chr3R:30844575-30844695 1.95e-01 48_[+1(4.11e-05)]_64 chr3R:24975184-24975304 1.77e-02 101_[+3(5.53e-05)]_11 chr2L:14521638-14521758 2.01e-01 99_[+1(8.46e-05)]_13 chr3L:4352148-4352268 3.09e-02 120 chr2R:11837108-11837228 1.19e-03 120 chr3L:11472527-11472647 1.09e-02 42_[+1(4.11e-05)]_70 chr3L:14497591-14497711 6.45e-01 120 chr3L:1376485-1376605 5.41e-03 83_[+1(4.11e-05)]_29 chr3L:14376002-14376122 9.62e-02 64_[+1(4.11e-05)]_48 chr3L:1120264-1120384 8.21e-03 60_[+1(4.11e-05)]_52 chr3L:1118580-1118700 8.85e-03 40_[+1(4.11e-05)]_72 chr3L:16869303-16869423 4.43e-02 120 chr3L:50934-51054 4.00e-03 43_[+1(4.11e-05)]_69 chr2R:7587649-7587769 2.87e-04 17_[+1(4.11e-05)]_4_[+1(8.46e-05)]_\ 22_[+4(1.03e-05)]_53 chr3L:1699917-1700037 1.51e-02 45_[+1(4.11e-05)]_67 chr3R:5033436-5033556 1.00e-01 120 chr2L:381809-381929 7.56e-02 104_[+1(4.11e-05)]_8 chrX:4477440-4477560 2.21e-02 120 chr3L:29797-29917 1.22e-03 53_[+1(4.11e-05)]_9_[+2(6.97e-05)]_\ 42 chr3R:21348491-21348611 8.33e-03 24_[+3(8.21e-05)]_19_[+1(4.11e-05)]_\ 61 chr3L:8652335-8652455 2.10e-01 120 chr3L:16215550-16215670 3.50e-03 34_[+3(9.77e-05)]_8_[+1(4.11e-05)]_\ 62 chr3L:620023-620143 1.74e-03 34_[+1(4.11e-05)]_78 chr3L:20653538-20653658 1.12e-01 120 chr2R:6522425-6522545 5.98e-02 43_[+1(8.46e-05)]_69 chr2R:19154427-19154547 1.77e-01 120 chr2R:18960455-18960575 9.58e-01 120 chr2R:15225799-15225919 7.16e-01 120 chr3L:6396451-6396571 2.15e-01 37_[+1(8.46e-05)]_75 chr3L:8882315-8882435 6.71e-02 120 chr2R:15225458-15225578 3.24e-01 120 chr2L:5748708-5748828 5.36e-02 120 chr3L:565724-565844 2.61e-02 89_[+3(2.53e-05)]_12_[+3(9.77e-05)]_\ 3 chr2L:4212085-4212205 2.45e-01 120 chr3L:22848894-22849014 9.20e-02 120 chr3R:7118704-7118824 3.10e-01 65_[+1(8.46e-05)]_47 chrX:8466868-8466988 8.17e-02 76_[+1(8.46e-05)]_36 chr2L:5974868-5974988 5.30e-02 120 chr3L:3447029-3447149 2.91e-01 64_[+1(8.46e-05)]_48 chrX:17393445-17393565 1.55e-03 66_[+1(4.11e-05)]_46 chr2R:7303586-7303706 9.69e-03 55_[+1(4.11e-05)]_57 chr3R:23132438-23132558 2.42e-02 120 chr3R:13918875-13918995 1.55e-01 120 chrX:11548416-11548536 2.04e-02 64_[+1(4.11e-05)]_48 chr3L:10382008-10382128 7.91e-01 120 chr2R:18237329-18237449 1.99e-01 57_[+1(8.46e-05)]_55 chr2L:2425932-2426052 7.24e-03 58_[+1(4.11e-05)]_6_[+3(1.37e-05)]_\ 7_[+3(2.53e-05)]_1_[+3(2.53e-05)]_16 chr3R:29210191-29210311 1.06e-01 48_[+1(8.46e-05)]_64 chr3L:16016500-16016620 1.24e-02 36_[+1(4.11e-05)]_76 chr3L:21524609-21524729 3.98e-02 71_[+1(8.46e-05)]_41 chr2L:20371258-20371378 1.06e-02 91_[+3(1.37e-05)]_21 chr2R:18267879-18267999 1.13e-03 81_[+3(2.53e-05)]_22_[+3(2.53e-05)]_\ 1 chr2L:1930952-1931072 3.15e-01 120 chr3L:30281-30401 1.02e-02 62_[+1(4.11e-05)]_50 chr2R:12533208-12533328 9.46e-02 47_[+1(8.46e-05)]_65 chr3L:30002-30122 2.18e-01 82_[+2(6.97e-05)]_30 chrX:15029997-15030117 1.09e-01 120 chr2R:24252190-24252310 2.89e-02 120 chr3R:11902728-11902848 2.39e-02 120 chr2L:7145705-7145825 1.91e-01 120 chr3R:15807445-15807565 1.71e-01 120 chr2L:1888835-1888955 3.53e-02 53_[+1(4.11e-05)]_59 chr2R:15225259-15225379 4.25e-02 120 chr3L:10975238-10975358 1.26e-01 71_[+1(8.46e-05)]_41 chr3L:16478747-16478867 9.08e-02 120 chr2L:225422-225542 1.67e-01 120 chr2R:15918059-15918179 6.05e-04 63_[+1(8.46e-05)]_49 chr2R:18582450-18582570 3.21e-03 52_[+1(4.11e-05)]_60 chr3R:17709762-17709882 4.88e-02 120 chr3L:11279545-11279665 2.47e-01 120 chr2L:21063278-21063398 5.27e-02 82_[+3(9.77e-05)]_30 chr2L:8987325-8987445 2.13e-02 61_[+1(4.11e-05)]_51 chr2L:11027358-11027478 4.95e-02 120 chr3L:2488803-2488923 7.60e-03 82_[+1(4.11e-05)]_30 chr3L:544892-545012 2.12e-04 62_[+5(1.57e-05)]_4_[+1(4.11e-05)]_\ 38 chr2L:14608397-14608517 2.54e-01 120 chr2L:5502117-5502237 7.02e-02 68_[+1(4.11e-05)]_44 chr3R:31939761-31939881 6.05e-04 24_[+1(4.11e-05)]_53_[+2(8.28e-05)]_\ 27 chr2R:24026697-24026817 1.48e-01 120 chr2L:13431058-13431178 1.03e-01 120 chr2R:7206829-7206949 1.83e-03 67_[+1(4.11e-05)]_45 chr3L:21711500-21711620 1.66e-01 120 chr3R:7969097-7969217 5.91e-01 120 chr2L:14652103-14652223 4.68e-03 57_[+1(4.11e-05)]_55 chr2L:14682615-14682735 3.32e-03 22_[+2(3.08e-05)]_90 chr2R:7587881-7588001 1.05e-01 103_[+3(4.16e-05)]_9 chr2L:7967035-7967155 3.08e-02 45_[+2(6.97e-05)]_42_[+1(8.46e-05)]_\ 17 chr3L:1754401-1754521 3.17e-01 120 chr3R:10686420-10686540 8.38e-02 16_[+1(8.46e-05)]_96 chr3R:21645869-21645989 1.44e-01 120 chr2L:7574903-7575023 7.89e-02 [+2(6.97e-05)]_1_[+2(6.97e-05)]_103 chr3R:13934068-13934188 1.83e-03 12_[+4(9.57e-05)]_5_[+5(5.42e-05)]_\ [+4(9.57e-05)]_79 chr3R:17110727-17110847 2.02e-01 120 chr2L:14351547-14351667 7.49e-02 120 chr2L:14254084-14254204 2.29e-03 48_[+1(4.11e-05)]_45_[+2(3.08e-05)]_\ 11 chr3L:8382624-8382744 4.36e-02 120 chr3L:16214947-16215067 4.71e-02 120 chr3L:8045102-8045222 3.98e-03 99_[+3(1.37e-05)]_13 chr3R:5594976-5595096 1.45e-01 19_[+1(8.46e-05)]_93 chr2R:7430537-7430657 1.40e-01 120 chr2L:440397-440517 8.74e-03 79_[+4(1.03e-05)]_33 chr3R:10573787-10573907 1.44e-03 41_[+5(3.44e-05)]_11_[+1(4.11e-05)]_\ 52 chr3L:15753782-15753902 3.43e-02 120 chr2L:15846607-15846727 1.54e-01 120 chr3L:12449311-12449431 1.83e-02 1_[+3(8.21e-05)]_111 chr3L:17403513-17403633 2.79e-01 120 chr2R:8181621-8181741 1.84e-01 120 chr3R:27685190-27685310 3.57e-01 120 chr2L:427974-428094 4.74e-04 76_[+1(4.11e-05)]_18_[+3(6.99e-05)]_\ 10 chr2R:20183258-20183378 2.55e-01 20_[+1(8.46e-05)]_92 chr3R:21650676-21650796 1.15e-02 120 chr2R:19936985-19937105 1.33e-01 120 chr3L:11405501-11405621 2.29e-03 11_[+2(1.58e-05)]_10_[+2(1.58e-05)]_\ 19_[+2(8.28e-05)]_[+1(8.46e-05)]_48 chr2R:16408808-16408928 3.76e-05 24_[+1(4.11e-05)]_68_[+5(3.44e-05)]_\ 12 chr3L:13217690-13217810 5.88e-02 89_[+1(4.11e-05)]_23 chrX:21056421-21056541 2.40e-01 81_[+1(4.11e-05)]_31 chr2R:16018292-16018412 8.94e-01 120 chrX:10820916-10821036 3.09e-03 89_[+1(4.11e-05)]_23 chr3R:21780319-21780439 3.32e-02 120 chrX:17320424-17320544 1.55e-04 10_[+2(1.58e-05)]_1_[+2(1.58e-05)]_\ 12_[+1(4.11e-05)]_33_[+3(5.53e-05)]_21_[+3(5.53e-05)]_3 chr3R:21649206-21649326 1.06e-02 3_[+2(6.97e-05)]_87_[+5(1.57e-05)]_\ 14 chr3L:3125491-3125611 7.11e-03 120 chrX:19296006-19296126 1.34e-03 26_[+2(1.58e-05)]_45_[+1(8.46e-05)]_\ 33 chr2R:6106129-6106249 9.24e-04 99_[+1(4.11e-05)]_13 chr2R:10582873-10582993 2.31e-02 40_[+1(8.46e-05)]_10_[+2(8.28e-05)]_\ 54 chr2R:24252391-24252511 7.52e-01 120 chr3L:17588810-17588930 3.11e-02 63_[+1(8.46e-05)]_49 chr2R:6645783-6645903 1.24e-02 60_[+1(4.11e-05)]_52 chr3L:17491766-17491886 3.02e-02 53_[+2(6.97e-05)]_3_[+1(8.46e-05)]_\ 48 chr3R:7954622-7954742 2.56e-03 82_[+1(4.11e-05)]_30 chrX:3686638-3686758 1.77e-05 16_[+3(4.16e-05)]_11_[+1(4.11e-05)]_\ 77 chr3L:549700-549820 1.10e-02 120 chrX:3370620-3370740 2.47e-03 6_[+1(4.11e-05)]_90_[+2(3.08e-05)]_\ 8 chr2R:22996178-22996298 1.21e-01 120 chr3R:8926696-8926816 1.07e-01 120 chrX:2517690-2517810 1.23e-01 27_[+1(4.11e-05)]_85 chr3L:21883259-21883379 2.09e-02 120 chr3R:21608386-21608506 9.54e-03 22_[+1(4.11e-05)]_1_[+2(6.97e-05)]_\ 81 chr3L:6320121-6320241 1.14e-02 55_[+1(4.11e-05)]_57 chr3R:12128414-12128534 9.54e-01 120 chr2L:7901999-7902119 1.24e-01 120 chr3R:13307070-13307190 1.32e-01 120 chr2L:717514-717634 1.97e-04 50_[+3(1.37e-05)]_34_[+2(3.08e-05)]_\ 20 chrX:12023302-12023422 1.80e-01 120 chrX:17154767-17154887 6.18e-02 34_[+1(4.11e-05)]_78 chr2L:7915189-7915309 4.77e-02 56_[+1(4.11e-05)]_56 chr3L:719305-719425 8.96e-03 35_[+2(8.28e-05)]_18_[+2(1.58e-05)]_\ 51 chr3R:26483860-26483980 2.05e-01 90_[+1(8.46e-05)]_22 chr2R:20152078-20152198 2.62e-02 81_[+3(4.16e-05)]_14_[+3(2.53e-05)]_\ 9 chr3L:2171253-2171373 6.36e-02 120 chr2L:7114769-7114889 6.35e-04 108_[+2(3.08e-05)]_4 chr2R:8038115-8038235 2.96e-01 120 chr3L:16048881-16049001 1.23e-01 120 chr3L:18036198-18036318 1.64e-02 58_[+1(8.46e-05)]_54 chrX:20500583-20500703 1.30e-03 96_[+4(9.57e-05)]_16 chr2L:19111878-19111998 5.03e-01 120 chr3R:31285922-31286042 9.24e-01 120 chr3R:7961523-7961643 8.66e-02 40_[+1(8.46e-05)]_72 chr3R:9889893-9890013 5.77e-02 65_[+5(1.57e-05)]_47 chr2L:16561471-16561591 3.18e-01 120 chr2R:17834127-17834247 2.91e-01 120 chr3L:1084950-1085070 6.16e-04 11_[+2(8.28e-05)]_45_[+1(4.11e-05)]_\ 48 chr3L:3667366-3667486 1.66e-01 120 chr2R:17838168-17838288 5.00e-03 5_[+2(1.58e-05)]_107 chr4:522910-523030 2.41e-03 120 chr3R:7749649-7749769 2.71e-04 40_[+1(8.46e-05)]_50_[+3(9.77e-05)]_\ 4_[+4(1.03e-05)]_2 chr3R:9160677-9160797 8.73e-02 120 chr3R:30343605-30343725 2.95e-03 88_[+1(4.11e-05)]_24 chr2L:18331319-18331439 1.91e-01 120 chr3R:7967023-7967143 6.56e-02 7_[+4(9.57e-05)]_105 chr2L:19071808-19071928 1.86e-01 120 chr2R:20564490-20564610 8.37e-02 61_[+1(8.46e-05)]_51 chrX:19473267-19473387 3.39e-02 82_[+1(8.46e-05)]_30 chr3L:623017-623137 1.97e-01 120 chr2L:14246706-14246826 6.25e-01 120 chr3L:10717074-10717194 3.63e-06 [+5(5.42e-05)]_34_[+3(5.53e-05)]_29_\ [+2(6.97e-05)]_33 chr3R:22195160-22195280 3.47e-03 59_[+1(8.46e-05)]_41_[+2(6.97e-05)]_\ 4 chr2R:9931544-9931664 1.09e-03 50_[+1(4.11e-05)]_19_[+2(8.28e-05)]_\ 35 chr2R:8747915-8748035 4.64e-01 120 chr2L:17376185-17376305 2.34e-01 49_[+1(8.46e-05)]_63 chr2R:6158245-6158365 5.34e-04 89_[+5(5.42e-05)]_23 chr2R:11184905-11185025 5.51e-02 91_[+1(4.11e-05)]_21 chrX:18671937-18672057 4.73e-03 65_[+3(2.53e-05)]_47 chr3L:22456228-22456348 2.42e-02 90_[+1(4.11e-05)]_22 chr3R:7969300-7969420 1.11e-01 120 chrX:9738793-9738913 2.90e-04 57_[+3(1.37e-05)]_30_[+3(1.37e-05)]_\ 17 chr3R:14497209-14497329 1.72e-03 26_[+1(8.46e-05)]_21_[+5(7.68e-06)]_\ 57 chr3R:30289425-30289545 2.49e-02 37_[+3(1.37e-05)]_75 chr3R:7174908-7175028 1.03e-03 81_[+1(4.11e-05)]_13_[+3(8.21e-05)]_\ 10 chr3R:31297642-31297762 6.00e-02 120 chrX:12716894-12717014 5.62e-02 120 chr3L:1205997-1206117 1.62e-02 57_[+1(8.46e-05)]_55 chr3L:7743891-7744011 5.92e-03 33_[+3(4.16e-05)]_79 chr3L:14611772-14611892 1.58e-02 39_[+1(4.11e-05)]_51_[+3(4.16e-05)]_\ 14 chr3R:7973223-7973343 1.61e-01 80_[+1(4.11e-05)]_32 chr2R:6712168-6712288 1.51e-01 120 chr3L:14495458-14495578 3.99e-01 120 chr3L:12461094-12461214 4.11e-02 120 chr2R:11763029-11763149 8.68e-01 120 chr3R:19813483-19813603 7.87e-01 120 chr2R:23718174-23718294 2.00e-01 120 chr2L:5436095-5436215 3.65e-01 120 chr2L:9946174-9946294 1.53e-03 48_[+1(4.11e-05)]_64 chr3L:51792-51912 6.45e-04 82_[+2(3.08e-05)]_[+1(4.11e-05)]_22 chr2R:7753245-7753365 1.76e-02 10_[+2(1.58e-05)]_7_[+2(3.08e-05)]_\ 87 chr2R:15918260-15918380 3.47e-01 120 chr2L:3351533-3351653 1.73e-02 14_[+4(1.03e-05)]_98 chr3R:13853554-13853674 5.59e-01 120 chrX:17876767-17876887 4.70e-02 42_[+1(4.11e-05)]_70 chr2L:684237-684357 8.57e-04 16_[+1(4.11e-05)]_47_[+2(1.58e-05)]_\ 28_[+1(8.46e-05)]_5 chr3L:7369134-7369254 2.37e-01 120 chr3R:7224084-7224204 8.45e-03 79_[+3(9.77e-05)]_14_[+3(9.77e-05)]_\ 11 chr3L:10388589-10388709 2.12e-03 4_[+3(4.16e-05)]_108 chr3R:19091096-19091216 1.20e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n05.farnam.hpc.yale.internal ********************************************************************************