******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/dm.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3L:4406013-4406133 1.0000 120 chr3R:29049486-29049606 1.0000 120 chr3L:9624170-9624290 1.0000 120 chr2R:23939640-23939760 1.0000 120 chr3R:4428721-4428841 1.0000 120 chr2L:18698671-18698791 1.0000 120 chr3L:17804640-17804760 1.0000 120 chr3R:15262889-15263009 1.0000 120 chr3L:20453413-20453533 1.0000 120 chrX:1354000-1354120 1.0000 120 chr3R:16647782-16647902 1.0000 120 chrX:13154880-13155000 1.0000 120 chrX:15584239-15584359 1.0000 120 chr3R:32052624-32052744 1.0000 120 chr2L:15752254-15752374 1.0000 120 chr3L:12537231-12537351 1.0000 120 chr2L:21178996-21179116 1.0000 120 chr2R:10875738-10875858 1.0000 120 chr3R:7094490-7094610 1.0000 120 chr2L:21156767-21156887 1.0000 120 chrX:5317370-5317490 1.0000 120 chrX:7959143-7959263 1.0000 120 chr2R:20278827-20278947 1.0000 120 chr2R:14601108-14601228 1.0000 120 chr2L:8364325-8364445 1.0000 120 chr2R:22635860-22635980 1.0000 120 chr2L:9893337-9893457 1.0000 120 chr3R:15346143-15346263 1.0000 120 chr2R:16347387-16347507 1.0000 120 chr2L:2873842-2873962 1.0000 120 chr2R:18615005-18615125 1.0000 120 chr3R:9631641-9631761 1.0000 120 chr2R:8906812-8906932 1.0000 120 chrX:11147956-11148076 1.0000 120 chrX:17246953-17247073 1.0000 120 chr2R:21097244-21097364 1.0000 120 chr2L:869745-869865 1.0000 120 chr3R:22583148-22583268 1.0000 120 chr3L:5777233-5777353 1.0000 120 chr2R:5754543-5754663 1.0000 120 chr2R:18440053-18440173 1.0000 120 chr3R:11231848-11231968 1.0000 120 chr2L:20735509-20735629 1.0000 120 chr3R:16272313-16272433 1.0000 120 chr2R:22483263-22483383 1.0000 120 chrX:8116132-8116252 1.0000 120 chr2L:16902098-16902218 1.0000 120 chr3R:27923038-27923158 1.0000 120 chr3L:21335180-21335300 1.0000 120 chrX:19616144-19616264 1.0000 120 chr2L:7023754-7023874 1.0000 120 chr2L:6920642-6920762 1.0000 120 chrX:16791146-16791266 1.0000 120 chrX:8121075-8121195 1.0000 120 chr3R:24877181-24877301 1.0000 120 chr3R:5599614-5599734 1.0000 120 chr2R:16868287-16868407 1.0000 120 chr3R:13780958-13781078 1.0000 120 chrX:20391398-20391518 1.0000 120 chr3L:14987666-14987786 1.0000 120 chrX:13624323-13624443 1.0000 120 chr3L:16730731-16730851 1.0000 120 chrX:8901648-8901768 1.0000 120 chrX:9089879-9089999 1.0000 120 chr3R:8805536-8805656 1.0000 120 chr2R:21624967-21625087 1.0000 120 chr2L:5724887-5725007 1.0000 120 chr3R:31736985-31737105 1.0000 120 chrX:16599216-16599336 1.0000 120 chr2R:14621878-14621998 1.0000 120 chr2L:7222952-7223072 1.0000 120 chr3R:22446587-22446707 1.0000 120 chr2L:9699772-9699892 1.0000 120 chr3R:22584722-22584842 1.0000 120 chr3R:7246913-7247033 1.0000 120 chrX:11349015-11349135 1.0000 120 chr2L:12096437-12096557 1.0000 120 chr3L:17427114-17427234 1.0000 120 chr3R:7188140-7188260 1.0000 120 chr2L:4227831-4227951 1.0000 120 chr3L:21433920-21434040 1.0000 120 chr2R:12871855-12871975 1.0000 120 chr2R:10540885-10541005 1.0000 120 chr3R:15263118-15263238 1.0000 120 chrX:1464154-1464274 1.0000 120 chrX:637060-637180 1.0000 120 chr3R:27947990-27948110 1.0000 120 chr3R:13648032-13648152 1.0000 120 chr2R:24668233-24668353 1.0000 120 chr3R:28600681-28600801 1.0000 120 chr3R:23053255-23053375 1.0000 120 chr2R:17420316-17420436 1.0000 120 chrX:11108877-11108997 1.0000 120 chrX:2585923-2586043 1.0000 120 chrX:8905901-8906021 1.0000 120 chr3R:21116210-21116330 1.0000 120 chr2R:18627914-18628034 1.0000 120 chr3R:12196270-12196390 1.0000 120 chr3L:262777-262897 1.0000 120 chr2L:6709238-6709358 1.0000 120 chr3R:11222785-11222905 1.0000 120 chr3R:10413272-10413392 1.0000 120 chr2R:14860682-14860802 1.0000 120 chrX:17422097-17422217 1.0000 120 chr2L:12433717-12433837 1.0000 120 chr2R:10026995-10027115 1.0000 120 chrX:15996989-15997109 1.0000 120 chr2R:16868490-16868610 1.0000 120 chr2L:4967728-4967848 1.0000 120 chr2L:4444685-4444805 1.0000 120 chr2L:21143391-21143511 1.0000 120 chr3R:16652109-16652229 1.0000 120 chr2L:6717557-6717677 1.0000 120 chrX:6688920-6689040 1.0000 120 chr3R:22035686-22035806 1.0000 120 chrX:9162047-9162167 1.0000 120 chr3L:21434126-21434246 1.0000 120 chrX:5622545-5622665 1.0000 120 chr2L:6024451-6024571 1.0000 120 chr3L:3055023-3055143 1.0000 120 chr2L:2151936-2152056 1.0000 120 chr2R:24187519-24187639 1.0000 120 chrX:9164318-9164438 1.0000 120 chr3L:13046908-13047028 1.0000 120 chr2R:7440650-7440770 1.0000 120 chrX:2184599-2184719 1.0000 120 chr2R:23556114-23556234 1.0000 120 chr2R:19227265-19227385 1.0000 120 chr2L:10769814-10769934 1.0000 120 chr3R:4753035-4753155 1.0000 120 chr3R:13645457-13645577 1.0000 120 chrX:6352620-6352740 1.0000 120 chrX:4113687-4113807 1.0000 120 chr2R:12039011-12039131 1.0000 120 chrX:6968655-6968775 1.0000 120 chr2L:6920851-6920971 1.0000 120 chr2R:6116698-6116818 1.0000 120 chr2R:9865595-9865715 1.0000 120 chr2L:19063259-19063379 1.0000 120 chrX:16289146-16289266 1.0000 120 chr2R:8860441-8860561 1.0000 120 chr2L:1728712-1728832 1.0000 120 chr3L:5899440-5899560 1.0000 120 chr2R:15145269-15145389 1.0000 120 chr3L:16710761-16710881 1.0000 120 chr2R:24780832-24780952 1.0000 120 chr3L:833148-833268 1.0000 120 chr3R:13388628-13388748 1.0000 120 chr2L:12435610-12435730 1.0000 120 chr3L:4322077-4322197 1.0000 120 chr3R:25476866-25476986 1.0000 120 chr2L:564108-564228 1.0000 120 chr2R:17789665-17789785 1.0000 120 chr2R:11452403-11452523 1.0000 120 chr3R:25127262-25127382 1.0000 120 chr3R:11412537-11412657 1.0000 120 chrX:21117353-21117473 1.0000 120 chr3R:9678096-9678216 1.0000 120 chr3L:21335379-21335499 1.0000 120 chr3R:20592560-20592680 1.0000 120 chr2L:20647464-20647584 1.0000 120 chrX:15746946-15747066 1.0000 120 chr3L:19807253-19807373 1.0000 120 chrX:17249439-17249559 1.0000 120 chr2R:6657248-6657368 1.0000 120 chr2L:271705-271825 1.0000 120 chr3R:24233977-24234097 1.0000 120 chr3R:13645255-13645375 1.0000 120 chr4:834273-834393 1.0000 120 chr2L:273611-273731 1.0000 120 chr2R:18141284-18141404 1.0000 120 chr3L:3223562-3223682 1.0000 120 chr3R:23359157-23359277 1.0000 120 chr3R:9628742-9628862 1.0000 120 chr3R:22491243-22491363 1.0000 120 chr3L:324665-324785 1.0000 120 chr3R:21777808-21777928 1.0000 120 chrX:940882-941002 1.0000 120 chr3L:18026091-18026211 1.0000 120 chrX:19480853-19480973 1.0000 120 chr2R:17518161-17518281 1.0000 120 chrX:18515345-18515465 1.0000 120 chr3L:9624386-9624506 1.0000 120 chr2L:1502712-1502832 1.0000 120 chr3R:28812198-28812318 1.0000 120 chr2R:12174952-12175072 1.0000 120 chr2L:22247709-22247829 1.0000 120 chr2R:14171127-14171247 1.0000 120 chr2L:20647668-20647788 1.0000 120 chr3R:7977161-7977281 1.0000 120 chr2R:6156407-6156527 1.0000 120 chr2L:252329-252449 1.0000 120 chr3L:15498898-15499018 1.0000 120 chr3R:31745629-31745749 1.0000 120 chr3R:9049296-9049416 1.0000 120 chr2R:23907054-23907174 1.0000 120 chrX:9684680-9684800 1.0000 120 chr2R:22483463-22483583 1.0000 120 chr2R:14870709-14870829 1.0000 120 chr2R:13198972-13199092 1.0000 120 chr2L:109326-109446 1.0000 120 chr3R:9003959-9004079 1.0000 120 chr2R:17672348-17672468 1.0000 120 chr3L:16786812-16786932 1.0000 120 chr3R:18301677-18301797 1.0000 120 chr2R:14360183-14360303 1.0000 120 chr2R:7589842-7589962 1.0000 120 chr3R:7080154-7080274 1.0000 120 chr3L:4367438-4367558 1.0000 120 chr2L:4968969-4969089 1.0000 120 chr2L:19034556-19034676 1.0000 120 chr2L:12692883-12693003 1.0000 120 chr2R:15939780-15939900 1.0000 120 chr3L:15507245-15507365 1.0000 120 chr3R:14879397-14879517 1.0000 120 chr3R:18283583-18283703 1.0000 120 chr3R:31218648-31218768 1.0000 120 chr3R:29592009-29592129 1.0000 120 chrX:16638189-16638309 1.0000 120 chr3R:18166515-18166635 1.0000 120 chr2R:9113850-9113970 1.0000 120 chrX:2241989-2242109 1.0000 120 chr2L:18612076-18612196 1.0000 120 chr3L:3225461-3225581 1.0000 120 chr2R:6746393-6746513 1.0000 120 chr2R:8670343-8670463 1.0000 120 chr2R:23707047-23707167 1.0000 120 chr3R:28811234-28811354 1.0000 120 chr2R:23907253-23907373 1.0000 120 chr2R:12870435-12870555 1.0000 120 chr2R:22066815-22066935 1.0000 120 chr3R:6369127-6369247 1.0000 120 chr2R:10026792-10026912 1.0000 120 chr2L:12038387-12038507 1.0000 120 chr2R:24560941-24561061 1.0000 120 chrX:12903346-12903466 1.0000 120 chrX:1030713-1030833 1.0000 120 chr2R:20999275-20999395 1.0000 120 chrX:3573545-3573665 1.0000 120 chr2R:11452736-11452856 1.0000 120 chrX:10745436-10745556 1.0000 120 chr3R:31060838-31060958 1.0000 120 chr3R:32052832-32052952 1.0000 120 chr3R:10761492-10761612 1.0000 120 chr3L:21493026-21493146 1.0000 120 chr2L:12056243-12056363 1.0000 120 chr3L:15098300-15098420 1.0000 120 chr2R:17699221-17699341 1.0000 120 chr3L:8509935-8510055 1.0000 120 chr3R:4429001-4429121 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_dm/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/dm.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.275 C 0.226 G 0.225 T 0.274 Background letter frequencies (from file dataset with add-one prior applied): A 0.275 C 0.226 G 0.225 T 0.274 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF RCACGTGB MEME-1 width = 8 sites = 213 llr = 1423 E-value = 2.7e-110 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 Description -------------------------------------------------------------------------------- Simplified A 419:2::: pos.-specific C 29:8:1:4 probability G 3:1:8:92 matrix T :::2:914 bits 2.1 1.9 1.7 1.5 **** * Relative 1.3 ****** Entropy 1.1 ****** (9.6 bits) 0.9 ****** 0.6 ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACACGTGT consensus G C sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:10026792-10026912 80 2.20e-05 CACCGAGGTT GCACGTGC GTATTTTGTT chr2R:8670343-8670463 7 2.20e-05 ACTCGA GCACGTGC TCGGCGGTGA chr2L:4968969-4969089 66 2.20e-05 ATTGATTCCA ACACGTGC GGTTCAATTT chr2R:17672348-17672468 4 2.20e-05 GCC GCACGTGC AATTAATGCT chr2R:6156407-6156527 65 2.20e-05 CAGCGCCCAG ACACGTGC ATTTTTCGAC chr3R:21777808-21777928 2 2.20e-05 C GCACGTGC TATTTCGGAT chr3L:324665-324785 16 2.20e-05 AATAAAAACA ACACGTGC AAAATCGATG chr3R:25127262-25127382 48 2.20e-05 GCAAAGAACA ACACGTGC ACGTTGACAA chr2R:17789665-17789785 46 2.20e-05 GCTGACTGCA ACACGTGC GCCGCGTTAG chrX:2184599-2184719 30 2.20e-05 AAATTTGTAA ACACGTGC GTATAGGTGT chr3R:22035686-22035806 70 2.20e-05 ATGGTTAGCA ACACGTGC GCGCAATATT chr2L:4444685-4444805 93 2.20e-05 TGCTAACTTC ACACGTGC AGTTTATGTG chrX:15996989-15997109 61 2.20e-05 ACTGTTGGCA ACACGTGC ACGAATTCGA chr3R:11222785-11222905 37 2.20e-05 ATGGCAGCCG ACACGTGC TTTCTACTCG chr3R:21116210-21116330 57 2.20e-05 ACTGATCCAT ACACGTGC GGGAGAAAAG chrX:1464154-1464274 19 2.20e-05 ATTGTCAAAA ACACGTGC AATGTTTGCC chr3R:22446587-22446707 35 2.20e-05 ACAGCCGCAC ACACGTGC TGGCAGAGAA chr3R:31736985-31737105 77 2.20e-05 AACAGCTGCA ACACGTGC GGTTTTAAAA chrX:13624323-13624443 42 2.20e-05 GCAAATCGCA ACACGTGC GAACCAGTGT chr3R:24877181-24877301 104 2.20e-05 CCATCGGAAT ACACGTGC TCAAAACGT chrX:8121075-8121195 33 2.20e-05 ACAACAACGT GCACGTGC TGCTTCTTCT chrX:19616144-19616264 62 2.20e-05 GGTGGAAACA ACACGTGC ACTCGTGTTT chr2R:5754543-5754663 18 2.20e-05 TTTCAAAGCC GCACGTGC TAAATTTAAC chr3R:22583148-22583268 50 2.20e-05 AATGCAGTCA ACACGTGC CGTCGCGCGT chr2R:21097244-21097364 18 2.20e-05 GAACGCAAAA ACACGTGC GCGTTCCGAT chr2R:16347387-16347507 76 2.20e-05 AAAAAAATAT ACACGTGC AGCTGGGCGG chrX:13154880-13155000 44 2.20e-05 TAGTTTGGAA ACACGTGC TAGGAACGAC chrX:1354000-1354120 50 2.20e-05 GTGACGCGCC GCACGTGC TTACGTTTTG chr3L:17804640-17804760 40 2.20e-05 TGAAAACAAC GCACGTGC AATTGTTTTG chr2L:18698671-18698791 63 2.20e-05 GAAGAAGACA ACACGTGC GTGCATTCAA chr2R:9113850-9113970 93 4.87e-05 CAAAGTAAAC GCACGTGT GGTGTGTGAC chr3R:18301677-18301797 24 4.87e-05 TTCAAATGTT GCACGTGT GGAAAACAAA chr2L:273611-273731 64 4.87e-05 TAGTTGCGGC GCACGTGT TGAGCCGATT chr3R:20592560-20592680 75 4.87e-05 AGGAATTCAC ACACGTGT GGTTGTGCTT chr3R:13388628-13388748 68 4.87e-05 TACTGCCAAA ACACGTGT GGCGAAGTGT chr3L:833148-833268 94 4.87e-05 ATCAGTGCTA GCACGTGT ATTTGTTTAC chr2R:24187519-24187639 10 4.87e-05 TCGGAAGAA GCACGTGT GCCACCACCT chr3L:262777-262897 77 4.87e-05 AAAATAAAAT GCACGTGT GGGGTCACTA chr2R:10540885-10541005 81 4.87e-05 GCGCACACAT ACACGTGT ACTTGTAGAA chr3R:7188140-7188260 65 4.87e-05 TCCCACGGGT GCACGTGT GTTTGTAGGG chr2L:12096437-12096557 22 4.87e-05 AATGCGAGCG GCACGTGT TGATATTCTT chr2L:9699772-9699892 46 4.87e-05 TAACGCTAAC GCACGTGT TTGAAAGCGA chrX:8901648-8901768 81 4.87e-05 TGTTGAATTT GCACGTGT TTCAAAGTAA chr3L:16730731-16730851 47 4.87e-05 AGAATGAAAT GCACGTGT TGCGGCTGCT chr3R:13780958-13781078 13 4.87e-05 ACTCAATGCA ACACGTGT GGACGATAAA chr2L:16902098-16902218 95 4.87e-05 TGTTTTTTCT ACACGTGT GGTGGCCCAA chrX:8116132-8116252 100 4.87e-05 TAGGCAGGCA GCACGTGT TGCTTAAATC chr2R:22483263-22483383 71 4.87e-05 AATATGTTTC GCACGTGT TGCATTTGAA chr3R:16272313-16272433 65 4.87e-05 AGCTAAACTC GCACGTGT TGCAGATGCG chr2L:2873842-2873962 72 4.87e-05 CTACTGAAAC GCACGTGT TGGTTCCGAT chr2R:14601108-14601228 73 4.87e-05 CAACAGCCGC GCACGTGT GTGGCTATTA chrX:5317370-5317490 68 4.87e-05 GTTTGTTTAC GCACGTGT TGTGTTTGAT chr2R:10875738-10875858 43 4.87e-05 TGTTTGAACT GCACGTGT TTATCAATTC chr3L:12537231-12537351 44 4.87e-05 TTTTTTTGCC GCACGTGT AGCGTTTATA chr2R:23939640-23939760 76 4.87e-05 TCTTTCGCAC ACACGTGT GGATCAACAA chr3L:9624170-9624290 84 4.87e-05 CATATCTAAT GCACGTGT TGTTTCAATT chr3L:4406013-4406133 36 4.87e-05 AAAAACGTAA ACACGTGT GTTTTTGCTA chr2R:23907054-23907174 11 7.06e-05 CTTTTGCAAA ACACGTGG TGGACCGAAA chr4:834273-834393 74 7.06e-05 GTTAGCCCGC GCACGTGG AATGTTACCA chr3R:4753035-4753155 65 7.06e-05 CACCGGAAGA ACACGTGG AGCTCGTAGG chr2R:24668233-24668353 71 7.06e-05 AGTTCCATTT GCACGTGG AACTCTTGAT chr2R:14621878-14621998 93 7.06e-05 ATGTGAAAAA ACACGTGG CGAGCGGTGA chrX:20391398-20391518 63 7.06e-05 GTCACACTGA GCACGTGG AGCAGACAAA chrX:17246953-17247073 83 7.06e-05 TTTTTTGTTG GCACGTGG CTTCAAAATT chrX:7959143-7959263 35 7.06e-05 TGACACGGAA ACACGTGG GGGATTGCAT chr2L:21178996-21179116 96 7.06e-05 GCACACTTAC ACACGTGG AGCCGCCAAC chr3L:20453413-20453533 55 7.06e-05 ATCACCATTT ACACGTGG TGCAATGTGA chr2R:14860682-14860802 33 8.06e-05 AGGAACGTCT CCACGTGC ATATAAGGCG chr2L:6709238-6709358 65 8.06e-05 GCCGCGACGC CCACGTGC AAAATTTGCG chr3R:22584722-22584842 73 8.06e-05 TATTGTTGCT CCACGTGC GGCGATTTTT chr3R:32052624-32052744 20 8.06e-05 TCCCTCTTTT CCACGTGC ATTTTATTGA chr2L:20647464-20647584 85 9.26e-05 GAAAGCCGCA CCACGTGT TGCCCATTCC chrX:9164318-9164438 91 9.26e-05 ATTCCGTTTA CCACGTGT GTTCGCTTGT chr2R:18627914-18628034 38 9.26e-05 CGGTCTCTCT CCACGTGT CAGTCAGTTC chr2L:7023754-7023874 42 9.26e-05 TAATGCGCAC CCACGTGT TGATCGAAAA chr3R:9631641-9631761 27 9.26e-05 CGTGTCGAGC CCACGTGT TGAGCCAATC chr3R:4428721-4428841 19 9.26e-05 TTTGCCCCAA CCACGTGT ATGTGTATGT chr2R:24780832-24780952 69 1.03e-04 AGAGGGAATC CCACGTGG TGGTGTCTGC chr2R:23556114-23556234 96 1.21e-04 AGCTGGCAAA ACACGCGC CACGCGGAAc chr3R:10413272-10413392 59 1.21e-04 CGAGGCGATA GCACGCGC ACGTTGTTTT chrX:637060-637180 101 1.21e-04 TCAGAACTAA ACACGCGC TCTATATGCA chr2L:7222952-7223072 71 1.21e-04 TAACCGGAAA ACACGCGC TCGTGGAAAA chr2R:17518161-17518281 74 1.47e-04 ACTGCGCAGC ACATGTGC GAGTAGTTCG chrX:21117353-21117473 10 1.47e-04 TGTAGAAAC ACATGTGC AAGGAAGAAG chrX:11108877-11108997 102 1.47e-04 AGACGGCATT GCATGTGC TGCTACTGCT chrX:11349015-11349135 90 1.47e-04 TTGGCACTGT ACATGTGC ATTCAATATT chr3R:8805536-8805656 76 1.47e-04 CACTCGAGTC ACATGTGC TGTATGTTGT chr3R:5599614-5599734 41 1.47e-04 ATGCCAGCGT ACATGTGC TTTAAACACA chr3L:21335180-21335300 65 1.47e-04 AATCGACAGA ACATGTGC TCTAGCTCCA chr2L:20735509-20735629 67 1.47e-04 GCCTCCGCAC ACATGTGC ATCCACGTAC chr3L:5777233-5777353 72 1.47e-04 TACGTTTTCA ACATGTGC GAGCGGCCAG chr3L:8509935-8510055 33 1.96e-04 CGAATAAATG GCACATGC GGCCACCCTA chrX:16599216-16599336 62 1.96e-04 TTGTGGCCAC ACACGCGT TTTTTCCCCA chr2R:16868287-16868407 109 1.96e-04 CAGCGGGTAA GCACGCGT CATT chr2L:19034556-19034676 7 2.56e-04 ATAATA ACATGTGT TCTTTATAGC chr2L:12435610-12435730 82 2.56e-04 CGTCGGCGTC GCATGTGT TGCTTGACTT chr2R:12871855-12871975 12 2.56e-04 TGCATAATCG ACAtgtgt gtgagtgtgg chr2R:23907253-23907373 47 3.15e-04 TTTTCTTTCG AAACGTGC TATTTCATGA chr3R:31745629-31745749 11 3.15e-04 TGACCTCTAA ACACATGT CATTCCGCGA chr3L:15498898-15499018 86 3.15e-04 ACTGTAGCAC GCACATGT TGTTTATGTT chr2L:1502712-1502832 92 3.15e-04 GCCTTTGCCA GCACATGT AAAACTGAGG chr3L:3223562-3223682 4 3.15e-04 CCT ACACATGT ACATAAAAAT chr3R:24233977-24234097 33 3.15e-04 CTCGCTGCTT ACACATGT ACATAATTTT chr2R:6657248-6657368 106 3.15e-04 CACGAAGGAT AAACGTGC GATAAGA chr3L:21434126-21434246 10 3.15e-04 GCCAGAAAA ACACATGT AATTTGGCGA chrX:9162047-9162167 1 3.15e-04 . AAACGTGC AAGTTTAATC chrX:17422097-17422217 15 3.15e-04 GAATTGAATA AAACGTGC GTGGCTCTTC chrX:8905901-8906021 75 3.15e-04 AGACACGCAC ACACATGT ACAAGGAGTA chr3L:14987666-14987786 75 3.15e-04 CTCCACGCTG GCACATGT CTAGCCTGTG chrX:16791146-16791266 59 3.15e-04 CGGCTTTTAA AAACGTGC AGAGCGCGGC chr3R:29049486-29049606 15 3.15e-04 AGCTAGCAGT GCACATGT TGCCGACTAG chrX:10745436-10745556 25 3.84e-04 TTCGCGCAGC ACACGCGG CACTTGGACT chrX:16638189-16638309 76 3.84e-04 ATATTGACCA GCACGCGG TTACCAAGGC chr3R:29592009-29592129 93 3.84e-04 acaaccactc gcacgcGG AGAGAAGAGC chr3R:14879397-14879517 103 3.84e-04 GGTGAAAAAC GCACGTTT TTCCCATTTT chr3L:16786812-16786932 83 3.84e-04 GCAGAAAAAT ACGCGTGC GAGGGCCGAC chr2R:22483463-22483583 47 3.84e-04 CAACCGCCTT ACACGTTT TTCACCCGCA chrX:18515345-18515465 33 3.84e-04 TCGCACTAGC GCACGTTT TCCCACCACG chr2L:1728712-1728832 67 3.84e-04 TTTGAAAGAC ACACGCGG ATTTTTTGTT chr2R:6116698-6116818 64 3.84e-04 CTTCAGACGA GCACGCGG TGCGCCCCAG chrX:6968655-6968775 57 3.84e-04 CGAGAAATCT GCACGCGG GCGATCAGCT chr2L:2151936-2152056 14 3.84e-04 CTCGCAAAAC ACACGTTT CTTTCGCCGC chr3L:3055023-3055143 85 3.84e-04 TTAGCACGCT GCACGTTT GTTTTTATTT chr2L:12433717-12433837 7 3.84e-04 ATAATT ACACGCGG ATTAATTTAC chr2R:17420316-17420436 55 3.84e-04 CGAAGGCGGC GCACGTTT TTCCAACGCA chr3L:17427114-17427234 20 3.84e-04 TGTTCAGCTT GCACGTTT ATTAAACTCT chr3R:7094490-7094610 25 3.84e-04 AGATGATGCT GCGCGTGC ACGCCGCCCT chr2R:8860441-8860561 104 4.51e-04 CTGGCTATTT CCACGCGC CCTCAACGA chrX:4113687-4113807 11 4.51e-04 CGAATAGTTA AAACGTGT TCGTCGCCTA chr3R:27947990-27948110 86 4.51e-04 AAGTCCACCC ACATGTGG GTGCGGAACC chr3R:9003959-9004079 22 5.11e-04 TTTAAGCTGA ACGCGTGT TGCCATATCA chr2L:109326-109446 23 5.11e-04 GTCATGCGCA CCATGTGC TTGTGGCTCA chr3L:16710761-16710881 39 5.11e-04 GAACCCACGG CCATGTGC TAGCTAGCCG chr2R:15145269-15145389 54 5.11e-04 ATTTCGGCAG CCATGTGC CCGTAATTAA chr3R:7246913-7247033 32 5.11e-04 AATGGGACGA GCACATGG AACGCCAACG chr3R:27923038-27923158 71 5.11e-04 AACCCGAATA CCATGTGC ACTTTCAGAG chr3R:15346143-15346263 45 5.11e-04 CCAATGGGCA ACACATGG CCAATCGAAT chr2L:8364325-8364445 60 5.11e-04 TACGTCTGCA CCATGTGC TTGCCTTTGC chrX:15584239-15584359 97 5.11e-04 TGCGCTGCCA GCACATGG AGCTGATGGC chr3R:31060838-31060958 51 5.72e-04 TCTACCGCGA GCACGTTG CTATCCCTCC chr2L:12692883-12693003 11 5.72e-04 TTTACACAGA ACACGTTG CTGCGAAATG chr2R:7440650-7440770 83 5.72e-04 GTGTTCTGGC GCACGTTG GAAGTAGAAT chr2L:6024451-6024571 56 5.72e-04 CGTTTTGTAA ACACGTTG TGTGCCAGTG chr2L:9893337-9893457 24 5.72e-04 TTTTCTCCAA ACACGTTG TTTTTCGTTA chrX:1030713-1030833 57 6.26e-04 ACCGCGACGC CCATGTGT TTTGAATTGC chr3R:6369127-6369247 24 6.26e-04 TGCAGCAGGC GAACGTGG AGGAGAAGCT chr2R:16868490-16868610 70 6.26e-04 CCGACAATGT GAACGTGG CCCGCTGGTA chr2L:6920642-6920762 58 6.26e-04 ACACAGCATT AAACGTGG CGGCGATTTA chr2R:19227265-19227385 104 6.85e-04 AACGTAGACT TCACGTGT TTCATTTGT chr3L:13046908-13047028 109 6.85e-04 AAAACCAAAA CAACGTGC TGCA chrX:2585923-2586043 86 6.85e-04 ATTATTATTT TCACGTGT GGCACGCAAA chr2R:21624967-21625087 97 6.85e-04 TTTGCGAAAA GCGCGTGG TATTTAATAC chr3R:11231848-11231968 69 6.85e-04 CCCCGCAACA CAACGTGC CCATTTGTTT chr2R:22635860-22635980 55 6.85e-04 TGTGTTTCCT CAACGTGC ATCTCGCGGC chrX:3573545-3573665 31 7.16e-04 TGAATTTATG CCGCGTGC TTCCACAGAG chr2L:22247709-22247829 89 7.16e-04 GAACTTACGT CCACGCGG TCGTATAGTT chr2L:21156767-21156887 37 7.16e-04 CGAGGGCGCG CCACGTTT TCTAGCTAGG chr2R:7589842-7589962 25 7.43e-04 ACTGACGGCA CAACGTGT GCAGCTCACC chr3L:18026091-18026211 50 7.43e-04 TTGGGGCCGG CCATGTGG CTACAGTTTG chr3L:19807253-19807373 5 7.43e-04 CTCA CAACGTGT AAAATCTCCC chr2L:6717557-6717677 100 7.43e-04 AGCAATCAGT CCATGTGG TAAACTAGGT chr3L:21433920-21434040 58 7.43e-04 GATCTAGAGG CAACGTGT TAGTGGAAAA chr3R:9628742-9628862 112 7.77e-04 CGTGATTTGT TCACGTGG C chr3L:21335379-21335499 89 7.77e-04 GAGTTCTAAC CCACATGG GCGTTCACCT chr2L:19063259-19063379 35 7.77e-04 TCGATTTCCC TCACGTGG TAACCACCGA chr2R:20278827-20278947 47 7.77e-04 GTTCAAAAAA CCGCGTGT TGAATGCTGC chr2L:564108-564228 57 7.89e-04 CCAAAAACAA CCACGTTG CGCAGCACCG chr3L:4322077-4322197 11 7.89e-04 GGCGAAGAAT CCACGTTG CCCAGGTTGG chr3R:13645255-13645375 40 8.01e-04 GTCTGTGGGG CAACGTGG GAAACAAACA chrX:15746946-15747066 107 9.35e-04 GGAACTAGCG GCATGCGT CATCGC chr3R:28600681-28600801 57 9.35e-04 CCGAGCCGGA GCATATGC GCAAGCTGTT chr2L:12056243-12056363 39 1.02e-03 ATTCACCACG AAACGCGC TCAGCTGTTG chr3R:28811234-28811354 11 1.02e-03 TCGTTGTATT AAACGCGC CGCAATTGAT chr2R:15939780-15939900 50 1.02e-03 TTCGTTAGCT GCACACGT ATGGAAATAT chrX:6352620-6352740 88 1.02e-03 TTCTTCTTCA ACACACGT CACGCTGGAA chr3R:10761492-10761612 37 1.19e-03 GATGCCAGTA AAATGTGC AAAACCGGAC chr2R:24560941-24561061 76 1.19e-03 GCGACCAACC GCACGTGA AGCGTAAAAT chrX:2241989-2242109 58 1.19e-03 AGATACTCTA AAATGTGC TGTGATGTTA chr3R:18283583-18283703 102 1.19e-03 CCATCTCCAA ACACGTGA AACGCGATTT chr2L:869745-869865 76 1.19e-03 TAAGATTCTT GCACGCTT GTTTTGGCCA chr2R:22066815-22066935 88 1.33e-03 TTCGCGATTA GCATGCGG CGTTGAAATT chr3L:4367438-4367558 18 1.33e-03 GATTTCACAG AAACATGC TGCTAGAGAT chr3R:9049296-9049416 32 1.33e-03 CACTAAATAT GCGTGTGC GAGCGAGCGC chrX:17249439-17249559 70 1.33e-03 GTAAGCTCTG GCATGTTT CCAGACACAG chr2R:9865595-9865715 81 1.33e-03 ACAAAACAAA GCATGCGG CCTTCGAAAT chr2L:4227831-4227951 67 1.33e-03 CTGTCGAACG AAACATGC CAGCAAGTCG chr2L:15752254-15752374 40 1.33e-03 TCGGGCCTTC ACATGTTT TGCGGCGTGC chrX:12903346-12903466 27 1.52e-03 GTTTACTGGC GCACATTT AACTGATGAG chr3L:3225461-3225581 74 1.52e-03 AAAAGCGTGA ACGCATGC CTTGACTTGC chr2L:252329-252449 68 1.52e-03 GATAATTGAA ACACATTT TAGGGCACAA chrX:6688920-6689040 64 1.52e-03 AAAAATATGA ACACATTT TTAAAAAGTT chr3R:15263118-15263238 104 1.52e-03 GTATACTTTC ACACACGG GCGGAAAAA chr2R:20999275-20999395 18 1.68e-03 CTCTTGCATT GCGCGTTC CCCAAGCTTC chrX:940882-941002 17 1.68e-03 TCCTGCGTGG AAACATGT CGGCCATTAC chr2R:12039011-12039131 63 1.68e-03 GAACCTCATA GCACGCTG TTTTGTTGAC chr2L:5724887-5725007 67 1.68e-03 AGTcgtgagt gcgtgtgt gcgtgcgtAT chr2R:18615005-18615125 81 1.68e-03 ATTACAAAAA ACACGCTG CCGGCATTTA chr3R:4429001-4429121 81 1.87e-03 CTTTAACCTC ACATGTTG AGCGCCGCGT chr2R:23707047-23707167 64 1.87e-03 GGATGTTACG GCATGTTG TTGAAAAGCT chr3R:15262889-15263009 94 1.87e-03 CGCATCATGC CCATATGC AGAGCCAAAG chrX:5622545-5622665 112 2.04e-03 CAAGAAACCG CCACACGT G chr3R:7080154-7080274 3 2.23e-03 GC GAGCGTGT GGACTTAATG chr3R:7977161-7977281 44 2.23e-03 AAATCAGAAG CCACATTC CTCATGATTC chr2L:10769814-10769934 83 2.23e-03 AATTGAAAAG AAGCGTGT TTTTAAACGA chr3R:23053255-23053375 41 2.23e-03 ATGCAAGTAC AAGCGTGT TGCTACATGC chr2R:18141284-18141404 19 2.39e-03 CTACCGACTG TCACATGT ACCAGTGTTG chr3L:15098300-15098420 9 2.52e-03 ATAATCCT CCACATTT GGTGATCCCA chr3R:9678096-9678216 63 2.52e-03 TCTTTGTGCG TCGCGTGC TTTGTCGTTG chr3R:25476866-25476986 36 2.52e-03 ACATAAACAG CCGCATGC AAACCGCGAT chr3R:18166515-18166635 54 2.64e-03 AGAATATGGG CCGTGTGT TTTCAGTCAA chr2L:271705-271825 5 2.64e-03 TCAA AAGCGTGG AAGCAACAGC chr2R:6746393-6746513 41 2.91e-03 TCGCCTCCAC TCGCGTGG TAATTTTCGC chr3R:13645457-13645577 54 3.06e-03 acacacttaa acacacTC CGACGCACGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:10026792-10026912 2.2e-05 79_[+1]_33 chr2R:8670343-8670463 2.2e-05 6_[+1]_106 chr2L:4968969-4969089 2.2e-05 65_[+1]_47 chr2R:17672348-17672468 2.2e-05 3_[+1]_109 chr2R:6156407-6156527 2.2e-05 64_[+1]_48 chr3R:21777808-21777928 2.2e-05 1_[+1]_111 chr3L:324665-324785 2.2e-05 15_[+1]_97 chr3R:25127262-25127382 2.2e-05 47_[+1]_65 chr2R:17789665-17789785 2.2e-05 45_[+1]_67 chrX:2184599-2184719 2.2e-05 29_[+1]_83 chr3R:22035686-22035806 2.2e-05 69_[+1]_43 chr2L:4444685-4444805 2.2e-05 92_[+1]_20 chrX:15996989-15997109 2.2e-05 60_[+1]_52 chr3R:11222785-11222905 2.2e-05 36_[+1]_76 chr3R:21116210-21116330 2.2e-05 56_[+1]_56 chrX:1464154-1464274 2.2e-05 18_[+1]_94 chr3R:22446587-22446707 2.2e-05 34_[+1]_78 chr3R:31736985-31737105 2.2e-05 76_[+1]_36 chrX:13624323-13624443 2.2e-05 41_[+1]_71 chr3R:24877181-24877301 2.2e-05 103_[+1]_9 chrX:8121075-8121195 2.2e-05 32_[+1]_80 chrX:19616144-19616264 2.2e-05 61_[+1]_51 chr2R:5754543-5754663 2.2e-05 17_[+1]_95 chr3R:22583148-22583268 2.2e-05 49_[+1]_63 chr2R:21097244-21097364 2.2e-05 17_[+1]_95 chr2R:16347387-16347507 2.2e-05 75_[+1]_37 chrX:13154880-13155000 2.2e-05 43_[+1]_69 chrX:1354000-1354120 2.2e-05 49_[+1]_63 chr3L:17804640-17804760 2.2e-05 39_[+1]_73 chr2L:18698671-18698791 2.2e-05 62_[+1]_50 chr2R:9113850-9113970 4.9e-05 92_[+1]_20 chr3R:18301677-18301797 4.9e-05 23_[+1]_89 chr2L:273611-273731 4.9e-05 63_[+1]_49 chr3R:20592560-20592680 4.9e-05 74_[+1]_38 chr3R:13388628-13388748 4.9e-05 67_[+1]_45 chr3L:833148-833268 4.9e-05 93_[+1]_19 chr2R:24187519-24187639 4.9e-05 9_[+1]_103 chr3L:262777-262897 4.9e-05 76_[+1]_36 chr2R:10540885-10541005 4.9e-05 80_[+1]_32 chr3R:7188140-7188260 4.9e-05 64_[+1]_48 chr2L:12096437-12096557 4.9e-05 21_[+1]_91 chr2L:9699772-9699892 4.9e-05 45_[+1]_67 chrX:8901648-8901768 4.9e-05 80_[+1]_32 chr3L:16730731-16730851 4.9e-05 46_[+1]_66 chr3R:13780958-13781078 4.9e-05 12_[+1]_100 chr2L:16902098-16902218 4.9e-05 94_[+1]_18 chrX:8116132-8116252 4.9e-05 99_[+1]_13 chr2R:22483263-22483383 4.9e-05 70_[+1]_42 chr3R:16272313-16272433 4.9e-05 64_[+1]_48 chr2L:2873842-2873962 4.9e-05 71_[+1]_41 chr2R:14601108-14601228 4.9e-05 72_[+1]_40 chrX:5317370-5317490 4.9e-05 67_[+1]_45 chr2R:10875738-10875858 4.9e-05 42_[+1]_70 chr3L:12537231-12537351 4.9e-05 43_[+1]_69 chr2R:23939640-23939760 4.9e-05 75_[+1]_37 chr3L:9624170-9624290 4.9e-05 83_[+1]_29 chr3L:4406013-4406133 4.9e-05 35_[+1]_77 chr2R:23907054-23907174 7.1e-05 10_[+1]_102 chr4:834273-834393 7.1e-05 73_[+1]_39 chr3R:4753035-4753155 7.1e-05 64_[+1]_48 chr2R:24668233-24668353 7.1e-05 70_[+1]_42 chr2R:14621878-14621998 7.1e-05 92_[+1]_20 chrX:20391398-20391518 7.1e-05 62_[+1]_50 chrX:17246953-17247073 7.1e-05 82_[+1]_30 chrX:7959143-7959263 7.1e-05 34_[+1]_78 chr2L:21178996-21179116 7.1e-05 95_[+1]_17 chr3L:20453413-20453533 7.1e-05 54_[+1]_58 chr2R:14860682-14860802 8.1e-05 32_[+1]_80 chr2L:6709238-6709358 8.1e-05 64_[+1]_48 chr3R:22584722-22584842 8.1e-05 72_[+1]_40 chr3R:32052624-32052744 8.1e-05 19_[+1]_93 chr2L:20647464-20647584 9.3e-05 84_[+1]_28 chrX:9164318-9164438 9.3e-05 90_[+1]_22 chr2R:18627914-18628034 9.3e-05 37_[+1]_75 chr2L:7023754-7023874 9.3e-05 41_[+1]_71 chr3R:9631641-9631761 9.3e-05 26_[+1]_86 chr3R:4428721-4428841 9.3e-05 18_[+1]_94 chr2R:24780832-24780952 0.0001 68_[+1]_44 chr2R:23556114-23556234 0.00012 95_[+1]_17 chr3R:10413272-10413392 0.00012 58_[+1]_54 chrX:637060-637180 0.00012 100_[+1]_12 chr2L:7222952-7223072 0.00012 70_[+1]_42 chr2R:17518161-17518281 0.00015 73_[+1]_39 chrX:21117353-21117473 0.00015 9_[+1]_103 chrX:11108877-11108997 0.00015 101_[+1]_11 chrX:11349015-11349135 0.00015 89_[+1]_23 chr3R:8805536-8805656 0.00015 75_[+1]_37 chr3R:5599614-5599734 0.00015 40_[+1]_72 chr3L:21335180-21335300 0.00015 64_[+1]_48 chr2L:20735509-20735629 0.00015 66_[+1]_46 chr3L:5777233-5777353 0.00015 71_[+1]_41 chr3L:8509935-8510055 0.0002 32_[+1]_80 chrX:16599216-16599336 0.0002 61_[+1]_51 chr2R:16868287-16868407 0.0002 108_[+1]_4 chr2L:19034556-19034676 0.00026 6_[+1]_106 chr2L:12435610-12435730 0.00026 81_[+1]_31 chr2R:12871855-12871975 0.00026 11_[+1]_101 chr2R:23907253-23907373 0.00031 46_[+1]_66 chr3R:31745629-31745749 0.00031 10_[+1]_102 chr3L:15498898-15499018 0.00031 85_[+1]_27 chr2L:1502712-1502832 0.00031 91_[+1]_21 chr3L:3223562-3223682 0.00031 3_[+1]_109 chr3R:24233977-24234097 0.00031 32_[+1]_80 chr2R:6657248-6657368 0.00031 105_[+1]_7 chr3L:21434126-21434246 0.00031 9_[+1]_103 chrX:9162047-9162167 0.00031 [+1]_112 chrX:17422097-17422217 0.00031 14_[+1]_98 chrX:8905901-8906021 0.00031 74_[+1]_38 chr3L:14987666-14987786 0.00031 74_[+1]_38 chrX:16791146-16791266 0.00031 58_[+1]_54 chr3R:29049486-29049606 0.00031 14_[+1]_98 chrX:10745436-10745556 0.00038 24_[+1]_88 chrX:16638189-16638309 0.00038 75_[+1]_37 chr3R:29592009-29592129 0.00038 92_[+1]_20 chr3R:14879397-14879517 0.00038 102_[+1]_10 chr3L:16786812-16786932 0.00038 82_[+1]_30 chr2R:22483463-22483583 0.00038 46_[+1]_66 chrX:18515345-18515465 0.00038 32_[+1]_80 chr2L:1728712-1728832 0.00038 66_[+1]_46 chr2R:6116698-6116818 0.00038 63_[+1]_49 chrX:6968655-6968775 0.00038 56_[+1]_56 chr2L:2151936-2152056 0.00038 13_[+1]_99 chr3L:3055023-3055143 0.00038 84_[+1]_28 chr2L:12433717-12433837 0.00038 6_[+1]_106 chr2R:17420316-17420436 0.00038 54_[+1]_58 chr3L:17427114-17427234 0.00038 19_[+1]_93 chr3R:7094490-7094610 0.00038 24_[+1]_88 chr2R:8860441-8860561 0.00045 103_[+1]_9 chrX:4113687-4113807 0.00045 10_[+1]_102 chr3R:27947990-27948110 0.00045 85_[+1]_27 chr3R:9003959-9004079 0.00051 21_[+1]_91 chr2L:109326-109446 0.00051 22_[+1]_90 chr3L:16710761-16710881 0.00051 38_[+1]_74 chr2R:15145269-15145389 0.00051 53_[+1]_59 chr3R:7246913-7247033 0.00051 31_[+1]_81 chr3R:27923038-27923158 0.00051 70_[+1]_42 chr3R:15346143-15346263 0.00051 44_[+1]_68 chr2L:8364325-8364445 0.00051 59_[+1]_53 chrX:15584239-15584359 0.00051 96_[+1]_16 chr3R:31060838-31060958 0.00057 50_[+1]_62 chr2L:12692883-12693003 0.00057 10_[+1]_102 chr2R:7440650-7440770 0.00057 82_[+1]_30 chr2L:6024451-6024571 0.00057 55_[+1]_57 chr2L:9893337-9893457 0.00057 23_[+1]_89 chrX:1030713-1030833 0.00063 56_[+1]_56 chr3R:6369127-6369247 0.00063 23_[+1]_89 chr2R:16868490-16868610 0.00063 69_[+1]_43 chr2L:6920642-6920762 0.00063 57_[+1]_55 chr2R:19227265-19227385 0.00069 103_[+1]_9 chr3L:13046908-13047028 0.00069 108_[+1]_4 chrX:2585923-2586043 0.00069 85_[+1]_27 chr2R:21624967-21625087 0.00069 96_[+1]_16 chr3R:11231848-11231968 0.00069 68_[+1]_44 chr2R:22635860-22635980 0.00069 54_[+1]_58 chrX:3573545-3573665 0.00072 30_[+1]_82 chr2L:22247709-22247829 0.00072 88_[+1]_24 chr2L:21156767-21156887 0.00072 36_[+1]_76 chr2R:7589842-7589962 0.00074 24_[+1]_88 chr3L:18026091-18026211 0.00074 49_[+1]_63 chr3L:19807253-19807373 0.00074 4_[+1]_108 chr2L:6717557-6717677 0.00074 99_[+1]_13 chr3L:21433920-21434040 0.00074 57_[+1]_55 chr3R:9628742-9628862 0.00078 111_[+1]_1 chr3L:21335379-21335499 0.00078 88_[+1]_24 chr2L:19063259-19063379 0.00078 34_[+1]_78 chr2R:20278827-20278947 0.00078 46_[+1]_66 chr2L:564108-564228 0.00079 56_[+1]_56 chr3L:4322077-4322197 0.00079 10_[+1]_102 chr3R:13645255-13645375 0.0008 39_[+1]_73 chrX:15746946-15747066 0.00093 106_[+1]_6 chr3R:28600681-28600801 0.00093 56_[+1]_56 chr2L:12056243-12056363 0.001 38_[+1]_74 chr3R:28811234-28811354 0.001 10_[+1]_102 chr2R:15939780-15939900 0.001 49_[+1]_63 chrX:6352620-6352740 0.001 87_[+1]_25 chr3R:10761492-10761612 0.0012 36_[+1]_76 chr2R:24560941-24561061 0.0012 75_[+1]_37 chrX:2241989-2242109 0.0012 57_[+1]_55 chr3R:18283583-18283703 0.0012 101_[+1]_11 chr2L:869745-869865 0.0012 75_[+1]_37 chr2R:22066815-22066935 0.0013 87_[+1]_25 chr3L:4367438-4367558 0.0013 17_[+1]_95 chr3R:9049296-9049416 0.0013 31_[+1]_81 chrX:17249439-17249559 0.0013 69_[+1]_43 chr2R:9865595-9865715 0.0013 80_[+1]_32 chr2L:4227831-4227951 0.0013 66_[+1]_46 chr2L:15752254-15752374 0.0013 39_[+1]_73 chrX:12903346-12903466 0.0015 26_[+1]_86 chr3L:3225461-3225581 0.0015 73_[+1]_39 chr2L:252329-252449 0.0015 67_[+1]_45 chrX:6688920-6689040 0.0015 63_[+1]_49 chr3R:15263118-15263238 0.0015 103_[+1]_9 chr2R:20999275-20999395 0.0017 17_[+1]_95 chrX:940882-941002 0.0017 16_[+1]_96 chr2R:12039011-12039131 0.0017 62_[+1]_50 chr2L:5724887-5725007 0.0017 66_[+1]_46 chr2R:18615005-18615125 0.0017 80_[+1]_32 chr3R:4429001-4429121 0.0019 80_[+1]_32 chr2R:23707047-23707167 0.0019 63_[+1]_49 chr3R:15262889-15263009 0.0019 93_[+1]_19 chrX:5622545-5622665 0.002 111_[+1]_1 chr3R:7080154-7080274 0.0022 2_[+1]_110 chr3R:7977161-7977281 0.0022 43_[+1]_69 chr2L:10769814-10769934 0.0022 82_[+1]_30 chr3R:23053255-23053375 0.0022 40_[+1]_72 chr2R:18141284-18141404 0.0024 18_[+1]_94 chr3L:15098300-15098420 0.0025 8_[+1]_104 chr3R:9678096-9678216 0.0025 62_[+1]_50 chr3R:25476866-25476986 0.0025 35_[+1]_77 chr3R:18166515-18166635 0.0026 53_[+1]_59 chr2L:271705-271825 0.0026 4_[+1]_108 chr2R:6746393-6746513 0.0029 40_[+1]_72 chr3R:13645457-13645577 0.0031 53_[+1]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCACGTGB width=8 seqs=213 chr2R:10026792-10026912 ( 80) GCACGTGC 1 chr2R:8670343-8670463 ( 7) GCACGTGC 1 chr2L:4968969-4969089 ( 66) ACACGTGC 1 chr2R:17672348-17672468 ( 4) GCACGTGC 1 chr2R:6156407-6156527 ( 65) ACACGTGC 1 chr3R:21777808-21777928 ( 2) GCACGTGC 1 chr3L:324665-324785 ( 16) ACACGTGC 1 chr3R:25127262-25127382 ( 48) ACACGTGC 1 chr2R:17789665-17789785 ( 46) ACACGTGC 1 chrX:2184599-2184719 ( 30) ACACGTGC 1 chr3R:22035686-22035806 ( 70) ACACGTGC 1 chr2L:4444685-4444805 ( 93) ACACGTGC 1 chrX:15996989-15997109 ( 61) ACACGTGC 1 chr3R:11222785-11222905 ( 37) ACACGTGC 1 chr3R:21116210-21116330 ( 57) ACACGTGC 1 chrX:1464154-1464274 ( 19) ACACGTGC 1 chr3R:22446587-22446707 ( 35) ACACGTGC 1 chr3R:31736985-31737105 ( 77) ACACGTGC 1 chrX:13624323-13624443 ( 42) ACACGTGC 1 chr3R:24877181-24877301 ( 104) ACACGTGC 1 chrX:8121075-8121195 ( 33) GCACGTGC 1 chrX:19616144-19616264 ( 62) ACACGTGC 1 chr2R:5754543-5754663 ( 18) GCACGTGC 1 chr3R:22583148-22583268 ( 50) ACACGTGC 1 chr2R:21097244-21097364 ( 18) ACACGTGC 1 chr2R:16347387-16347507 ( 76) ACACGTGC 1 chrX:13154880-13155000 ( 44) ACACGTGC 1 chrX:1354000-1354120 ( 50) GCACGTGC 1 chr3L:17804640-17804760 ( 40) GCACGTGC 1 chr2L:18698671-18698791 ( 63) ACACGTGC 1 chr2R:9113850-9113970 ( 93) GCACGTGT 1 chr3R:18301677-18301797 ( 24) GCACGTGT 1 chr2L:273611-273731 ( 64) GCACGTGT 1 chr3R:20592560-20592680 ( 75) ACACGTGT 1 chr3R:13388628-13388748 ( 68) ACACGTGT 1 chr3L:833148-833268 ( 94) GCACGTGT 1 chr2R:24187519-24187639 ( 10) GCACGTGT 1 chr3L:262777-262897 ( 77) GCACGTGT 1 chr2R:10540885-10541005 ( 81) ACACGTGT 1 chr3R:7188140-7188260 ( 65) GCACGTGT 1 chr2L:12096437-12096557 ( 22) GCACGTGT 1 chr2L:9699772-9699892 ( 46) GCACGTGT 1 chrX:8901648-8901768 ( 81) GCACGTGT 1 chr3L:16730731-16730851 ( 47) GCACGTGT 1 chr3R:13780958-13781078 ( 13) ACACGTGT 1 chr2L:16902098-16902218 ( 95) ACACGTGT 1 chrX:8116132-8116252 ( 100) GCACGTGT 1 chr2R:22483263-22483383 ( 71) GCACGTGT 1 chr3R:16272313-16272433 ( 65) GCACGTGT 1 chr2L:2873842-2873962 ( 72) GCACGTGT 1 chr2R:14601108-14601228 ( 73) GCACGTGT 1 chrX:5317370-5317490 ( 68) GCACGTGT 1 chr2R:10875738-10875858 ( 43) GCACGTGT 1 chr3L:12537231-12537351 ( 44) GCACGTGT 1 chr2R:23939640-23939760 ( 76) ACACGTGT 1 chr3L:9624170-9624290 ( 84) GCACGTGT 1 chr3L:4406013-4406133 ( 36) ACACGTGT 1 chr2R:23907054-23907174 ( 11) ACACGTGG 1 chr4:834273-834393 ( 74) GCACGTGG 1 chr3R:4753035-4753155 ( 65) ACACGTGG 1 chr2R:24668233-24668353 ( 71) GCACGTGG 1 chr2R:14621878-14621998 ( 93) ACACGTGG 1 chrX:20391398-20391518 ( 63) GCACGTGG 1 chrX:17246953-17247073 ( 83) GCACGTGG 1 chrX:7959143-7959263 ( 35) ACACGTGG 1 chr2L:21178996-21179116 ( 96) ACACGTGG 1 chr3L:20453413-20453533 ( 55) ACACGTGG 1 chr2R:14860682-14860802 ( 33) CCACGTGC 1 chr2L:6709238-6709358 ( 65) CCACGTGC 1 chr3R:22584722-22584842 ( 73) CCACGTGC 1 chr3R:32052624-32052744 ( 20) CCACGTGC 1 chr2L:20647464-20647584 ( 85) CCACGTGT 1 chrX:9164318-9164438 ( 91) CCACGTGT 1 chr2R:18627914-18628034 ( 38) CCACGTGT 1 chr2L:7023754-7023874 ( 42) CCACGTGT 1 chr3R:9631641-9631761 ( 27) CCACGTGT 1 chr3R:4428721-4428841 ( 19) CCACGTGT 1 chr2R:24780832-24780952 ( 69) CCACGTGG 1 chr2R:23556114-23556234 ( 96) ACACGCGC 1 chr3R:10413272-10413392 ( 59) GCACGCGC 1 chrX:637060-637180 ( 101) ACACGCGC 1 chr2L:7222952-7223072 ( 71) ACACGCGC 1 chr2R:17518161-17518281 ( 74) ACATGTGC 1 chrX:21117353-21117473 ( 10) ACATGTGC 1 chrX:11108877-11108997 ( 102) GCATGTGC 1 chrX:11349015-11349135 ( 90) ACATGTGC 1 chr3R:8805536-8805656 ( 76) ACATGTGC 1 chr3R:5599614-5599734 ( 41) ACATGTGC 1 chr3L:21335180-21335300 ( 65) ACATGTGC 1 chr2L:20735509-20735629 ( 67) ACATGTGC 1 chr3L:5777233-5777353 ( 72) ACATGTGC 1 chr3L:8509935-8510055 ( 33) GCACATGC 1 chrX:16599216-16599336 ( 62) ACACGCGT 1 chr2R:16868287-16868407 ( 109) GCACGCGT 1 chr2L:19034556-19034676 ( 7) ACATGTGT 1 chr2L:12435610-12435730 ( 82) GCATGTGT 1 chr2R:12871855-12871975 ( 12) ACATGTGT 1 chr2R:23907253-23907373 ( 47) AAACGTGC 1 chr3R:31745629-31745749 ( 11) ACACATGT 1 chr3L:15498898-15499018 ( 86) GCACATGT 1 chr2L:1502712-1502832 ( 92) GCACATGT 1 chr3L:3223562-3223682 ( 4) ACACATGT 1 chr3R:24233977-24234097 ( 33) ACACATGT 1 chr2R:6657248-6657368 ( 106) AAACGTGC 1 chr3L:21434126-21434246 ( 10) ACACATGT 1 chrX:9162047-9162167 ( 1) AAACGTGC 1 chrX:17422097-17422217 ( 15) AAACGTGC 1 chrX:8905901-8906021 ( 75) ACACATGT 1 chr3L:14987666-14987786 ( 75) GCACATGT 1 chrX:16791146-16791266 ( 59) AAACGTGC 1 chr3R:29049486-29049606 ( 15) GCACATGT 1 chrX:10745436-10745556 ( 25) ACACGCGG 1 chrX:16638189-16638309 ( 76) GCACGCGG 1 chr3R:29592009-29592129 ( 93) GCACGCGG 1 chr3R:14879397-14879517 ( 103) GCACGTTT 1 chr3L:16786812-16786932 ( 83) ACGCGTGC 1 chr2R:22483463-22483583 ( 47) ACACGTTT 1 chrX:18515345-18515465 ( 33) GCACGTTT 1 chr2L:1728712-1728832 ( 67) ACACGCGG 1 chr2R:6116698-6116818 ( 64) GCACGCGG 1 chrX:6968655-6968775 ( 57) GCACGCGG 1 chr2L:2151936-2152056 ( 14) ACACGTTT 1 chr3L:3055023-3055143 ( 85) GCACGTTT 1 chr2L:12433717-12433837 ( 7) ACACGCGG 1 chr2R:17420316-17420436 ( 55) GCACGTTT 1 chr3L:17427114-17427234 ( 20) GCACGTTT 1 chr3R:7094490-7094610 ( 25) GCGCGTGC 1 chr2R:8860441-8860561 ( 104) CCACGCGC 1 chrX:4113687-4113807 ( 11) AAACGTGT 1 chr3R:27947990-27948110 ( 86) ACATGTGG 1 chr3R:9003959-9004079 ( 22) ACGCGTGT 1 chr2L:109326-109446 ( 23) CCATGTGC 1 chr3L:16710761-16710881 ( 39) CCATGTGC 1 chr2R:15145269-15145389 ( 54) CCATGTGC 1 chr3R:7246913-7247033 ( 32) GCACATGG 1 chr3R:27923038-27923158 ( 71) CCATGTGC 1 chr3R:15346143-15346263 ( 45) ACACATGG 1 chr2L:8364325-8364445 ( 60) CCATGTGC 1 chrX:15584239-15584359 ( 97) GCACATGG 1 chr3R:31060838-31060958 ( 51) GCACGTTG 1 chr2L:12692883-12693003 ( 11) ACACGTTG 1 chr2R:7440650-7440770 ( 83) GCACGTTG 1 chr2L:6024451-6024571 ( 56) ACACGTTG 1 chr2L:9893337-9893457 ( 24) ACACGTTG 1 chrX:1030713-1030833 ( 57) CCATGTGT 1 chr3R:6369127-6369247 ( 24) GAACGTGG 1 chr2R:16868490-16868610 ( 70) GAACGTGG 1 chr2L:6920642-6920762 ( 58) AAACGTGG 1 chr2R:19227265-19227385 ( 104) TCACGTGT 1 chr3L:13046908-13047028 ( 109) CAACGTGC 1 chrX:2585923-2586043 ( 86) TCACGTGT 1 chr2R:21624967-21625087 ( 97) GCGCGTGG 1 chr3R:11231848-11231968 ( 69) CAACGTGC 1 chr2R:22635860-22635980 ( 55) CAACGTGC 1 chrX:3573545-3573665 ( 31) CCGCGTGC 1 chr2L:22247709-22247829 ( 89) CCACGCGG 1 chr2L:21156767-21156887 ( 37) CCACGTTT 1 chr2R:7589842-7589962 ( 25) CAACGTGT 1 chr3L:18026091-18026211 ( 50) CCATGTGG 1 chr3L:19807253-19807373 ( 5) CAACGTGT 1 chr2L:6717557-6717677 ( 100) CCATGTGG 1 chr3L:21433920-21434040 ( 58) CAACGTGT 1 chr3R:9628742-9628862 ( 112) TCACGTGG 1 chr3L:21335379-21335499 ( 89) CCACATGG 1 chr2L:19063259-19063379 ( 35) TCACGTGG 1 chr2R:20278827-20278947 ( 47) CCGCGTGT 1 chr2L:564108-564228 ( 57) CCACGTTG 1 chr3L:4322077-4322197 ( 11) CCACGTTG 1 chr3R:13645255-13645375 ( 40) CAACGTGG 1 chrX:15746946-15747066 ( 107) GCATGCGT 1 chr3R:28600681-28600801 ( 57) GCATATGC 1 chr2L:12056243-12056363 ( 39) AAACGCGC 1 chr3R:28811234-28811354 ( 11) AAACGCGC 1 chr2R:15939780-15939900 ( 50) GCACACGT 1 chrX:6352620-6352740 ( 88) ACACACGT 1 chr3R:10761492-10761612 ( 37) AAATGTGC 1 chr2R:24560941-24561061 ( 76) GCACGTGA 1 chrX:2241989-2242109 ( 58) AAATGTGC 1 chr3R:18283583-18283703 ( 102) ACACGTGA 1 chr2L:869745-869865 ( 76) GCACGCTT 1 chr2R:22066815-22066935 ( 88) GCATGCGG 1 chr3L:4367438-4367558 ( 18) AAACATGC 1 chr3R:9049296-9049416 ( 32) GCGTGTGC 1 chrX:17249439-17249559 ( 70) GCATGTTT 1 chr2R:9865595-9865715 ( 81) GCATGCGG 1 chr2L:4227831-4227951 ( 67) AAACATGC 1 chr2L:15752254-15752374 ( 40) ACATGTTT 1 chrX:12903346-12903466 ( 27) GCACATTT 1 chr3L:3225461-3225581 ( 74) ACGCATGC 1 chr2L:252329-252449 ( 68) ACACATTT 1 chrX:6688920-6689040 ( 64) ACACATTT 1 chr3R:15263118-15263238 ( 104) ACACACGG 1 chr2R:20999275-20999395 ( 18) GCGCGTTC 1 chrX:940882-941002 ( 17) AAACATGT 1 chr2R:12039011-12039131 ( 63) GCACGCTG 1 chr2L:5724887-5725007 ( 67) GCGTGTGT 1 chr2R:18615005-18615125 ( 81) ACACGCTG 1 chr3R:4429001-4429121 ( 81) ACATGTTG 1 chr2R:23707047-23707167 ( 64) GCATGTTG 1 chr3R:15262889-15263009 ( 94) CCATATGC 1 chrX:5622545-5622665 ( 112) CCACACGT 1 chr3R:7080154-7080274 ( 3) GAGCGTGT 1 chr3R:7977161-7977281 ( 44) CCACATTC 1 chr2L:10769814-10769934 ( 83) AAGCGTGT 1 chr3R:23053255-23053375 ( 41) AAGCGTGT 1 chr2R:18141284-18141404 ( 19) TCACATGT 1 chr3L:15098300-15098420 ( 9) CCACATTT 1 chr3R:9678096-9678216 ( 63) TCGCGTGC 1 chr3R:25476866-25476986 ( 36) CCGCATGC 1 chr3R:18166515-18166635 ( 54) CCGTGTGT 1 chr2L:271705-271825 ( 5) AAGCGTGG 1 chr2R:6746393-6746513 ( 41) TCGCGTGG 1 chr3R:13645457-13645577 ( 54) ACACACTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.22965 E= 2.7e-110 67 -26 60 -306 -112 195 -1438 -1438 173 -1438 -141 -1438 -1438 189 -1438 -74 -87 -1438 191 -1438 -1438 -78 -1438 166 -1438 -1438 194 -101 -487 74 3 49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 213 E= 2.7e-110 0.436620 0.187793 0.342723 0.032864 0.126761 0.873239 0.000000 0.000000 0.915493 0.000000 0.084507 0.000000 0.000000 0.835681 0.000000 0.164319 0.150235 0.000000 0.849765 0.000000 0.000000 0.131455 0.000000 0.868545 0.000000 0.000000 0.863850 0.136150 0.009390 0.375587 0.230047 0.384977 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCACGTGB MEME-1 regular expression -------------------------------------------------------------------------------- [AG]CACGTG[TCG] -------------------------------------------------------------------------------- Time 7.29 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-2 width = 8 sites = 38 llr = 353 E-value = 1.4e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 2a:::a18 pos.-specific C 1::a:::: probability G ::::a::: matrix T 7:a:::92 bits 2.1 ** 1.9 ***** 1.7 ***** 1.5 ****** Relative 1.3 ****** Entropy 1.1 ******* (13.4 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:12056243-12056363 68 2.18e-05 ACACATCACT TATCGATA GCAAAGCACT chrX:2241989-2242109 15 2.18e-05 GAAGTACGCT TATCGATA ACAGCGCAGG chr3R:9003959-9004079 58 2.18e-05 AAACTTGTGA TATCGATA TTAAATGGAG chr3L:324665-324785 46 2.18e-05 TATTCCACAC TATCGATA ACTCCATAAA chr2L:273611-273731 87 2.18e-05 CGATTGGGGT TATCGATA AGATCCGATT chr2L:271705-271825 86 2.18e-05 CTGCCCTGGT TATCGATA TTATTCCCCG chr3R:25476866-25476986 60 2.18e-05 CGATTAAGGC TATCGATA TATAGCGCTT chr2R:12039011-12039131 16 2.18e-05 TGCCCAAGTA TATCGATA ACCGATAGGT chr3R:22035686-22035806 16 2.18e-05 AATTGGCAAT TATCGATA GGCACAGCTG chr2L:6717557-6717677 48 2.18e-05 AGTGTGAAAA TATCGATA TCATCGAAAT chr2L:7222952-7223072 104 2.18e-05 ACAAGACTGC TATCGATA TGCGAAGGC chrX:8901648-8901768 50 2.18e-05 GGCACACGGC TATCGATA GCGCAATATT chr3L:16730731-16730851 90 2.18e-05 AAAAACATAT TATCGATA TCGGGCTCTG chrX:19616144-19616264 41 2.18e-05 TGTTGCGTGC TATCGATA GACGGTGGAA chr2R:22483263-22483383 43 2.18e-05 GCCGACTGTC TATCGATA ACAGTGCGTA chr2R:21097244-21097364 84 2.18e-05 GTTATCGACT TATCGATA GCCACGGCCA chr3R:15346143-15346263 26 2.18e-05 ATCGCTGCGT TATCGATA GCCAATGGGC chr2L:9893337-9893457 92 2.18e-05 TTTTCCATGT TATCGATA TCGAAAGTGA chrX:1354000-1354120 21 2.18e-05 TACCATCCGA TATCGATA ACCAAACCGG chr3L:4406013-4406133 102 2.18e-05 AGCGGGCTCT TATCGATA GCGCAAATAA chr3R:18283583-18283703 59 4.36e-05 GCGAAGAACA AATCGATA GAAACGGCTG chr3L:13046908-13047028 73 4.36e-05 GATAGGACGT AATCGATA GACTTATCGG chrX:5622545-5622665 10 4.36e-05 AGTGGGCGC AATCGATA GGCCACTCGA chrX:9162047-9162167 15 4.36e-05 GTGCAAGTTT AATCGATA GACGCTGACG chrX:1464154-1464274 63 4.36e-05 TCTATCGTGA AATCGATA TGGCGAGATT chr2L:15752254-15752374 4 4.36e-05 CAG AATCGATA ACCATGTCTA chr3R:13388628-13388748 6 6.53e-05 CTTTT TATCGATT TTTTAAGCTA chr2L:19063259-19063379 23 6.53e-05 TTTGCCGGTC TATCGATT TCCCTCACGT chrX:2184599-2184719 49 6.53e-05 TATAGGTGTA TATCGATT GGCCAGAGAT chr3L:262777-262897 107 6.53e-05 GGTGGAATAG TATCGATT GCCCTT chr2R:14601108-14601228 103 6.53e-05 GGTGGAACCG TATCGATT TTAACGGTCA chr2L:12692883-12693003 83 8.32e-05 AACTTATCGG CATCGATA ACATCATCCC chr3L:21335180-21335300 12 8.32e-05 CATCGCCCAA CATCGATA TCAAGAGAAA chrX:13154880-13155000 104 8.32e-05 AGCTTTAGAT CATCGATA CTGCCGGAA chr3R:11412537-11412657 2 1.05e-04 A AATCGATT ACTATCCAAT chr2R:18615005-18615125 29 1.05e-04 ATAGACTGCT AATCGATT ATTAGCAGCT chr2R:19227265-19227385 69 1.27e-04 CCTGTGCTGT TATCGAAA AATACGATAA chr3R:10413272-10413392 38 1.27e-04 TTGAAATCGT TATCGAAA ATACGAGGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:12056243-12056363 2.2e-05 67_[+2]_45 chrX:2241989-2242109 2.2e-05 14_[+2]_98 chr3R:9003959-9004079 2.2e-05 57_[+2]_55 chr3L:324665-324785 2.2e-05 45_[+2]_67 chr2L:273611-273731 2.2e-05 86_[+2]_26 chr2L:271705-271825 2.2e-05 85_[+2]_27 chr3R:25476866-25476986 2.2e-05 59_[+2]_53 chr2R:12039011-12039131 2.2e-05 15_[+2]_97 chr3R:22035686-22035806 2.2e-05 15_[+2]_97 chr2L:6717557-6717677 2.2e-05 47_[+2]_65 chr2L:7222952-7223072 2.2e-05 103_[+2]_9 chrX:8901648-8901768 2.2e-05 49_[+2]_63 chr3L:16730731-16730851 2.2e-05 89_[+2]_23 chrX:19616144-19616264 2.2e-05 40_[+2]_72 chr2R:22483263-22483383 2.2e-05 42_[+2]_70 chr2R:21097244-21097364 2.2e-05 83_[+2]_29 chr3R:15346143-15346263 2.2e-05 25_[+2]_87 chr2L:9893337-9893457 2.2e-05 91_[+2]_21 chrX:1354000-1354120 2.2e-05 20_[+2]_92 chr3L:4406013-4406133 2.2e-05 101_[+2]_11 chr3R:18283583-18283703 4.4e-05 58_[+2]_54 chr3L:13046908-13047028 4.4e-05 72_[+2]_40 chrX:5622545-5622665 4.4e-05 9_[+2]_103 chrX:9162047-9162167 4.4e-05 14_[+2]_98 chrX:1464154-1464274 4.4e-05 62_[+2]_50 chr2L:15752254-15752374 4.4e-05 3_[+2]_109 chr3R:13388628-13388748 6.5e-05 5_[+2]_107 chr2L:19063259-19063379 6.5e-05 22_[+2]_90 chrX:2184599-2184719 6.5e-05 48_[+2]_64 chr3L:262777-262897 6.5e-05 106_[+2]_6 chr2R:14601108-14601228 6.5e-05 102_[+2]_10 chr2L:12692883-12693003 8.3e-05 82_[+2]_30 chr3L:21335180-21335300 8.3e-05 11_[+2]_101 chrX:13154880-13155000 8.3e-05 103_[+2]_9 chr3R:11412537-11412657 0.0001 1_[+2]_111 chr2R:18615005-18615125 0.0001 28_[+2]_84 chr2R:19227265-19227385 0.00013 68_[+2]_44 chr3R:10413272-10413392 0.00013 37_[+2]_75 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=38 chr2L:12056243-12056363 ( 68) TATCGATA 1 chrX:2241989-2242109 ( 15) TATCGATA 1 chr3R:9003959-9004079 ( 58) TATCGATA 1 chr3L:324665-324785 ( 46) TATCGATA 1 chr2L:273611-273731 ( 87) TATCGATA 1 chr2L:271705-271825 ( 86) TATCGATA 1 chr3R:25476866-25476986 ( 60) TATCGATA 1 chr2R:12039011-12039131 ( 16) TATCGATA 1 chr3R:22035686-22035806 ( 16) TATCGATA 1 chr2L:6717557-6717677 ( 48) TATCGATA 1 chr2L:7222952-7223072 ( 104) TATCGATA 1 chrX:8901648-8901768 ( 50) TATCGATA 1 chr3L:16730731-16730851 ( 90) TATCGATA 1 chrX:19616144-19616264 ( 41) TATCGATA 1 chr2R:22483263-22483383 ( 43) TATCGATA 1 chr2R:21097244-21097364 ( 84) TATCGATA 1 chr3R:15346143-15346263 ( 26) TATCGATA 1 chr2L:9893337-9893457 ( 92) TATCGATA 1 chrX:1354000-1354120 ( 21) TATCGATA 1 chr3L:4406013-4406133 ( 102) TATCGATA 1 chr3R:18283583-18283703 ( 59) AATCGATA 1 chr3L:13046908-13047028 ( 73) AATCGATA 1 chrX:5622545-5622665 ( 10) AATCGATA 1 chrX:9162047-9162167 ( 15) AATCGATA 1 chrX:1464154-1464274 ( 63) AATCGATA 1 chr2L:15752254-15752374 ( 4) AATCGATA 1 chr3R:13388628-13388748 ( 6) TATCGATT 1 chr2L:19063259-19063379 ( 23) TATCGATT 1 chrX:2184599-2184719 ( 49) TATCGATT 1 chr3L:262777-262897 ( 107) TATCGATT 1 chr2R:14601108-14601228 ( 103) TATCGATT 1 chr2L:12692883-12693003 ( 83) CATCGATA 1 chr3L:21335180-21335300 ( 12) CATCGATA 1 chrX:13154880-13155000 ( 104) CATCGATA 1 chr3R:11412537-11412657 ( 2) AATCGATT 1 chr2R:18615005-18615125 ( 29) AATCGATT 1 chr2R:19227265-19227385 ( 69) TATCGAAA 1 chr3R:10413272-10413392 ( 38) TATCGAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.4344 E= 1.4e-013 -39 -151 -1189 138 186 -1189 -1189 -1189 -1189 -1189 -1189 187 -1189 215 -1189 -1189 -1189 -1189 215 -1189 186 -1189 -1189 -1189 -238 -1189 -1189 179 157 -1189 -1189 -57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 38 E= 1.4e-013 0.210526 0.078947 0.000000 0.710526 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.052632 0.000000 0.000000 0.947368 0.815789 0.000000 0.000000 0.184211 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 regular expression -------------------------------------------------------------------------------- [TA]ATCGATA -------------------------------------------------------------------------------- Time 13.17 secs. ******************************************************************************** ******************************************************************************** MOTIF AWCAGCTG MEME-3 width = 8 sites = 27 llr = 253 E-value = 1.2e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A a5:a:::: pos.-specific C ::9::a:: probability G :11:a:3a matrix T :4::::7: bits 2.1 ** * 1.9 * *** * 1.7 * **** * 1.5 * **** * Relative 1.3 * **** * Entropy 1.1 * ****** (13.5 bits) 0.9 * ****** 0.6 * ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AACAGCTG consensus T G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:14879397-14879517 27 1.47e-05 CGAGGGCTGC AACAGCTG AAGTCAGCTG chr2L:271705-271825 17 1.47e-05 GCGTGGAAGC AACAGCTG GCAAAACACA chr2R:23556114-23556234 83 1.47e-05 CAAAAAGAGC AACAGCTG GCAAAACACG chr2R:24668233-24668353 105 1.47e-05 TAACGAACAA AACAGCTG ATCGGCAA chr3R:7246913-7247033 76 1.47e-05 AGCGGAGCGC AACAGCTG CTCAGAAGCG chr3R:31736985-31737105 67 1.47e-05 GGTCACTCCT AACAGCTG CAACACGTGC chr3R:13780958-13781078 29 1.47e-05 GTGGACGATA AACAGCTG TTCGGGCGGC chr3R:24877181-24877301 64 1.47e-05 AAGCACAAAA AACAGCTG ACGGCAACAA chr3L:15498898-15499018 47 2.94e-05 ACTCAACACA ATCAGCTG ACAGCCGCTC chr2R:17518161-17518281 16 2.94e-05 AGACGCACAA ATCAGCTG TTTGTTTTTA chrX:6968655-6968775 68 2.94e-05 CACGCGGGCG ATCAGCTG GCCGGCAGTG chr2R:14860682-14860802 78 2.94e-05 CTTTTGTGGT ATCAGCTG TTTGGCGAGT chr3L:17427114-17427234 45 2.94e-05 TCTGAAAACG ATCAGCTG TTGCCGCAGC chrX:8121075-8121195 58 2.94e-05 TCTTCTTCAA ATCAGCTG TCCCGGAGTG chr3R:11231848-11231968 30 2.94e-05 TGTTTACTGG ATCAGCTG TTCGCTGCAA chr2R:24187519-24187639 103 4.15e-05 TCTGGAAGTA AACAGCGG CCAGGGCTCA chr2L:9893337-9893457 51 4.15e-05 ATTTATACGC AACAGCGG TTTGATTAAA chr3R:16647782-16647902 49 4.15e-05 TTCTCTTTCA AACAGCGG CAGCGCCAGC chrX:18515345-18515465 112 5.36e-05 GCGCAGAAAA AGCAGCTG A chrX:20391398-20391518 80 5.36e-05 GAGCAGACAA AGCAGCTG GATTGAGAAA chr2R:18615005-18615125 40 5.36e-05 ATCGATTATT AGCAGCTG CGTCGGCTCA chrX:3573545-3573665 56 6.56e-05 GAGTTGCCAG ATCAGCGG AGAACGCTAA chr2R:16868287-16868407 97 6.56e-05 CAACAGCTAC ATCAGCGG GTAAGCACGC chr2L:869745-869865 103 6.56e-05 AGGCTGCCAG ATCAGCGG TAAATGCGTG chrX:9164318-9164438 67 7.55e-05 AAAGGGGCAA AGCAGCGG TACTAAATTC chr3L:12537231-12537351 76 9.02e-05 AGAGAAGAGG AAGAGCTG TCTTCTAGTT chr2L:15752254-15752374 113 9.02e-05 ATGGATATAG AAGAGCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:14879397-14879517 1.5e-05 26_[+3]_86 chr2L:271705-271825 1.5e-05 16_[+3]_96 chr2R:23556114-23556234 1.5e-05 82_[+3]_30 chr2R:24668233-24668353 1.5e-05 104_[+3]_8 chr3R:7246913-7247033 1.5e-05 75_[+3]_37 chr3R:31736985-31737105 1.5e-05 66_[+3]_46 chr3R:13780958-13781078 1.5e-05 28_[+3]_84 chr3R:24877181-24877301 1.5e-05 63_[+3]_49 chr3L:15498898-15499018 2.9e-05 46_[+3]_66 chr2R:17518161-17518281 2.9e-05 15_[+3]_97 chrX:6968655-6968775 2.9e-05 67_[+3]_45 chr2R:14860682-14860802 2.9e-05 77_[+3]_35 chr3L:17427114-17427234 2.9e-05 44_[+3]_68 chrX:8121075-8121195 2.9e-05 57_[+3]_55 chr3R:11231848-11231968 2.9e-05 29_[+3]_83 chr2R:24187519-24187639 4.2e-05 102_[+3]_10 chr2L:9893337-9893457 4.2e-05 50_[+3]_62 chr3R:16647782-16647902 4.2e-05 48_[+3]_64 chrX:18515345-18515465 5.4e-05 111_[+3]_1 chrX:20391398-20391518 5.4e-05 79_[+3]_33 chr2R:18615005-18615125 5.4e-05 39_[+3]_73 chrX:3573545-3573665 6.6e-05 55_[+3]_57 chr2R:16868287-16868407 6.6e-05 96_[+3]_16 chr2L:869745-869865 6.6e-05 102_[+3]_10 chrX:9164318-9164438 7.6e-05 66_[+3]_46 chr3L:12537231-12537351 9e-05 75_[+3]_37 chr2L:15752254-15752374 9e-05 112_[+3] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AWCAGCTG width=8 seqs=27 chr3R:14879397-14879517 ( 27) AACAGCTG 1 chr2L:271705-271825 ( 17) AACAGCTG 1 chr2R:23556114-23556234 ( 83) AACAGCTG 1 chr2R:24668233-24668353 ( 105) AACAGCTG 1 chr3R:7246913-7247033 ( 76) AACAGCTG 1 chr3R:31736985-31737105 ( 67) AACAGCTG 1 chr3R:13780958-13781078 ( 29) AACAGCTG 1 chr3R:24877181-24877301 ( 64) AACAGCTG 1 chr3L:15498898-15499018 ( 47) ATCAGCTG 1 chr2R:17518161-17518281 ( 16) ATCAGCTG 1 chrX:6968655-6968775 ( 68) ATCAGCTG 1 chr2R:14860682-14860802 ( 78) ATCAGCTG 1 chr3L:17427114-17427234 ( 45) ATCAGCTG 1 chrX:8121075-8121195 ( 58) ATCAGCTG 1 chr3R:11231848-11231968 ( 30) ATCAGCTG 1 chr2R:24187519-24187639 ( 103) AACAGCGG 1 chr2L:9893337-9893457 ( 51) AACAGCGG 1 chr3R:16647782-16647902 ( 49) AACAGCGG 1 chrX:18515345-18515465 ( 112) AGCAGCTG 1 chrX:20391398-20391518 ( 80) AGCAGCTG 1 chr2R:18615005-18615125 ( 40) AGCAGCTG 1 chrX:3573545-3573665 ( 56) ATCAGCGG 1 chr2R:16868287-16868407 ( 97) ATCAGCGG 1 chr2L:869745-869865 ( 103) ATCAGCGG 1 chrX:9164318-9164438 ( 67) AGCAGCGG 1 chr3L:12537231-12537351 ( 76) AAGAGCTG 1 chr2L:15752254-15752374 ( 113) AAGAGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.83018 E= 1.2e-002 186 -1140 -1140 -1140 81 -1140 -60 44 -1140 204 -160 -1140 186 -1140 -1140 -1140 -1140 -1140 215 -1140 -1140 215 -1140 -1140 -1140 -1140 20 143 -1140 -1140 215 -1140 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 27 E= 1.2e-002 1.000000 0.000000 0.000000 0.000000 0.481481 0.000000 0.148148 0.370370 0.000000 0.925926 0.074074 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.259259 0.740741 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 regular expression -------------------------------------------------------------------------------- A[AT]CAGC[TG]G -------------------------------------------------------------------------------- Time 19.02 secs. ******************************************************************************** ******************************************************************************** MOTIF GTGTGRCC MEME-4 width = 8 sites = 19 llr = 187 E-value = 2.2e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::6:: pos.-specific C ::::::a9 probability G a:a:84:1 matrix T :a:a2::: bits 2.1 * * * 1.9 **** * 1.7 **** ** 1.5 **** ** Relative 1.3 ***** ** Entropy 1.1 ******** (14.2 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTGTGACC consensus TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:9113850-9113970 104 1.20e-05 CACGTGTGGT GTGTGACC GTTTGTGGG chr3R:23359157-23359277 85 1.20e-05 GTGGAGGTCC GTGTGACC CCCTCTCGCA chr3R:13388628-13388748 82 1.20e-05 GTGTGGCGAA GTGTGACC GGAGCTTGAA chr2L:6024451-6024571 71 1.20e-05 TTGTGTGCCA GTGTGACC GTTTTTGAAT chrX:9162047-9162167 52 1.20e-05 GATAGTCGTC GTGTGACC GGCTTGCATA chr2L:4967728-4967848 47 1.20e-05 CAAAAGAGCA GTGTGACC GTGGCCTAGT chrX:2585923-2586043 62 1.20e-05 TTAGTTATTA GTGTGACC TTAAGCATTA chrX:8121075-8121195 73 1.20e-05 CTGTCCCGGA GTGTGACC ATGTGGCATT chr3R:22583148-22583268 69 1.20e-05 GTCGCGCGTT GTGTGACC GCCGCCAGAG chr2L:12692883-12693003 38 2.18e-05 GTTAAGGAAA GTGTGGCC GCACTCGCTG chrX:17249439-17249559 28 2.18e-05 ATTTTGTACA GTGTGGCC GTTTCTTGTT chrX:6968655-6968775 83 2.18e-05 CTGGCCGGCA GTGTGGCC ATTCGTCGGG chr2L:6709238-6709358 95 2.18e-05 AACATCGACA GTGTGGCC AGATCGCTGC chr3L:15498898-15499018 20 3.65e-05 TTTTGCATTA GTGTTACC ACACCCACTA chr3L:5777233-5777353 89 3.65e-05 CGAGCGGCCA GTGTTACC AGATGGGCAA chr2R:18141284-18141404 31 4.84e-05 ACATGTACCA GTGTTGCC ACCcagacac chr3L:17427114-17427234 68 4.84e-05 GCAGCTAACG GTGTTGCC ACATAGTCAA chrX:1354000-1354120 38 6.04e-05 AACCAAACCG GTGTGACG CGCCGCACGT chrX:11147956-11148076 89 7.02e-05 TCCTGCTTCG GTGTGGCG TACGGAGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:9113850-9113970 1.2e-05 103_[+4]_9 chr3R:23359157-23359277 1.2e-05 84_[+4]_28 chr3R:13388628-13388748 1.2e-05 81_[+4]_31 chr2L:6024451-6024571 1.2e-05 70_[+4]_42 chrX:9162047-9162167 1.2e-05 51_[+4]_61 chr2L:4967728-4967848 1.2e-05 46_[+4]_66 chrX:2585923-2586043 1.2e-05 61_[+4]_51 chrX:8121075-8121195 1.2e-05 72_[+4]_40 chr3R:22583148-22583268 1.2e-05 68_[+4]_44 chr2L:12692883-12693003 2.2e-05 37_[+4]_75 chrX:17249439-17249559 2.2e-05 27_[+4]_85 chrX:6968655-6968775 2.2e-05 82_[+4]_30 chr2L:6709238-6709358 2.2e-05 94_[+4]_18 chr3L:15498898-15499018 3.6e-05 19_[+4]_93 chr3L:5777233-5777353 3.6e-05 88_[+4]_24 chr2R:18141284-18141404 4.8e-05 30_[+4]_82 chr3L:17427114-17427234 4.8e-05 67_[+4]_45 chrX:1354000-1354120 6e-05 37_[+4]_75 chrX:11147956-11148076 7e-05 88_[+4]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGTGRCC width=8 seqs=19 chr2R:9113850-9113970 ( 104) GTGTGACC 1 chr3R:23359157-23359277 ( 85) GTGTGACC 1 chr3R:13388628-13388748 ( 82) GTGTGACC 1 chr2L:6024451-6024571 ( 71) GTGTGACC 1 chrX:9162047-9162167 ( 52) GTGTGACC 1 chr2L:4967728-4967848 ( 47) GTGTGACC 1 chrX:2585923-2586043 ( 62) GTGTGACC 1 chrX:8121075-8121195 ( 73) GTGTGACC 1 chr3R:22583148-22583268 ( 69) GTGTGACC 1 chr2L:12692883-12693003 ( 38) GTGTGGCC 1 chrX:17249439-17249559 ( 28) GTGTGGCC 1 chrX:6968655-6968775 ( 83) GTGTGGCC 1 chr2L:6709238-6709358 ( 95) GTGTGGCC 1 chr3L:15498898-15499018 ( 20) GTGTTACC 1 chr3L:5777233-5777353 ( 89) GTGTTACC 1 chr2R:18141284-18141404 ( 31) GTGTTGCC 1 chr3L:17427114-17427234 ( 68) GTGTTGCC 1 chrX:1354000-1354120 ( 38) GTGTGACG 1 chrX:11147956-11148076 ( 89) GTGTGGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.4349 E= 2.2e+000 -1089 -1089 215 -1089 -1089 -1089 -1089 187 -1089 -1089 215 -1089 -1089 -1089 -1089 187 -1089 -1089 181 -38 120 -1089 71 -1089 -1089 215 -1089 -1089 -1089 199 -110 -1089 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 19 E= 2.2e+000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.789474 0.210526 0.631579 0.000000 0.368421 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.894737 0.105263 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGRCC MEME-4 regular expression -------------------------------------------------------------------------------- GTGT[GT][AG]CC -------------------------------------------------------------------------------- Time 24.88 secs. ******************************************************************************** ******************************************************************************** MOTIF GGTCACAC MEME-5 width = 8 sites = 17 llr = 169 E-value = 4.8e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::a:9: pos.-specific C ::2a:a:9 probability G aa1::::1 matrix T ::8:::1: bits 2.1 ** * * 1.9 ** *** 1.7 ** *** * 1.5 ** *** * Relative 1.3 ** ***** Entropy 1.1 ** ***** (14.4 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGTCACAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:21493026-21493146 74 1.21e-05 ACTTGCGGCT GGTCACAC TGCGCTAAAC chrX:1030713-1030833 41 1.21e-05 CTCCAGATAC GGTCACAC CGCGACGCCC chr2R:23907253-23907373 73 1.21e-05 GACAGGCTGT GGTCACAC TACCTTCCCA chr2L:252329-252449 93 1.21e-05 CAAATAACAC GGTCACAC TAACAGTTTT chr2R:17518161-17518281 58 1.21e-05 TGCGTGCTCT GGTCACAC TGCGCAGCAC chr2L:6717557-6717677 14 1.21e-05 TTGCGTAAGC GGTCACAC TGCTCCGCTT chrX:20391398-20391518 52 1.21e-05 ATTCGAGCGC GGTCACAC TGAGCACGTG chr2L:6920642-6920762 44 1.21e-05 GGCTGGCGGC GGTCACAC AGCATTAAAC chr2R:10875738-10875858 16 1.21e-05 AATAGGATCT GGTCACAC AACCTGCCTT chrX:15996989-15997109 45 2.21e-05 TTGTCAATAC GGCCACAC TGTTGGCAAC chrX:2585923-2586043 26 2.21e-05 GGTGCGCAAC GGCCACAC TGACGCGCTG chr2R:21624967-21625087 75 2.21e-05 AATAGCAAAA GGCCACAC TAATTTTGCG chr2R:8670343-8670463 26 3.42e-05 CGGCGGTGAT GGTCACTC TAAAGATAAG chr3R:31736985-31737105 57 3.42e-05 TACGGTCCAC GGTCACTC CTAACAGCTG chrX:15746946-15747066 59 4.62e-05 CAAACGTTTT GGTCACAG CTGCGGCAAC chr3L:5899440-5899560 100 4.62e-05 TCTAGTGCAT GGTCACAG TTGTCAGCAC chr3R:5599614-5599734 79 5.62e-05 AGCGGAGAAC GGGCACAC TTCACATCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:21493026-21493146 1.2e-05 73_[+5]_39 chrX:1030713-1030833 1.2e-05 40_[+5]_72 chr2R:23907253-23907373 1.2e-05 72_[+5]_40 chr2L:252329-252449 1.2e-05 92_[+5]_20 chr2R:17518161-17518281 1.2e-05 57_[+5]_55 chr2L:6717557-6717677 1.2e-05 13_[+5]_99 chrX:20391398-20391518 1.2e-05 51_[+5]_61 chr2L:6920642-6920762 1.2e-05 43_[+5]_69 chr2R:10875738-10875858 1.2e-05 15_[+5]_97 chrX:15996989-15997109 2.2e-05 44_[+5]_68 chrX:2585923-2586043 2.2e-05 25_[+5]_87 chr2R:21624967-21625087 2.2e-05 74_[+5]_38 chr2R:8670343-8670463 3.4e-05 25_[+5]_87 chr3R:31736985-31737105 3.4e-05 56_[+5]_56 chrX:15746946-15747066 4.6e-05 58_[+5]_54 chr3L:5899440-5899560 4.6e-05 99_[+5]_13 chr3R:5599614-5599734 5.6e-05 78_[+5]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTCACAC width=8 seqs=17 chr3L:21493026-21493146 ( 74) GGTCACAC 1 chrX:1030713-1030833 ( 41) GGTCACAC 1 chr2R:23907253-23907373 ( 73) GGTCACAC 1 chr2L:252329-252449 ( 93) GGTCACAC 1 chr2R:17518161-17518281 ( 58) GGTCACAC 1 chr2L:6717557-6717677 ( 14) GGTCACAC 1 chrX:20391398-20391518 ( 52) GGTCACAC 1 chr2L:6920642-6920762 ( 44) GGTCACAC 1 chr2R:10875738-10875858 ( 16) GGTCACAC 1 chrX:15996989-15997109 ( 45) GGCCACAC 1 chrX:2585923-2586043 ( 26) GGCCACAC 1 chr2R:21624967-21625087 ( 75) GGCCACAC 1 chr2R:8670343-8670463 ( 26) GGTCACTC 1 chr3R:31736985-31737105 ( 57) GGTCACTC 1 chrX:15746946-15747066 ( 59) GGTCACAG 1 chr3L:5899440-5899560 ( 100) GGTCACAG 1 chr3R:5599614-5599734 ( 79) GGGCACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.4927 E= 4.8e+001 -1073 -1073 215 -1073 -1073 -1073 215 -1073 -1073 -35 -194 148 -1073 215 -1073 -1073 186 -1073 -1073 -1073 -1073 215 -1073 -1073 168 -1073 -1073 -122 -1073 197 -94 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 17 E= 4.8e+001 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.176471 0.058824 0.764706 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.882353 0.000000 0.000000 0.117647 0.000000 0.882353 0.117647 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 regular expression -------------------------------------------------------------------------------- GGTCACAC -------------------------------------------------------------------------------- Time 30.57 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:4406013-4406133 2.62e-03 35_[+1(4.87e-05)]_58_[+2(2.18e-05)]_\ 11 chr3R:29049486-29049606 1.66e-01 120 chr3L:9624170-9624290 7.46e-02 83_[+1(4.87e-05)]_29 chr2R:23939640-23939760 6.67e-03 75_[+1(4.87e-05)]_37 chr3R:4428721-4428841 6.37e-02 18_[+1(9.26e-05)]_94 chr2L:18698671-18698791 1.06e-01 62_[+1(2.20e-05)]_50 chr3L:17804640-17804760 6.74e-03 39_[+1(2.20e-05)]_73 chr3R:15262889-15263009 8.10e-01 120 chr3L:20453413-20453533 1.49e-01 54_[+1(7.06e-05)]_58 chrX:1354000-1354120 5.45e-05 20_[+2(2.18e-05)]_9_[+4(6.04e-05)]_\ 4_[+1(2.20e-05)]_63 chr3R:16647782-16647902 1.08e-01 48_[+3(4.15e-05)]_64 chrX:13154880-13155000 3.94e-03 43_[+1(2.20e-05)]_52_[+2(8.32e-05)]_\ 9 chrX:15584239-15584359 8.99e-02 120 chr3R:32052624-32052744 5.08e-02 19_[+1(8.06e-05)]_93 chr2L:15752254-15752374 2.32e-03 3_[+2(4.36e-05)]_101_[+3(9.02e-05)] chr3L:12537231-12537351 3.59e-03 43_[+1(4.87e-05)]_24_[+3(9.02e-05)]_\ 37 chr2L:21178996-21179116 1.67e-01 95_[+1(7.06e-05)]_17 chr2R:10875738-10875858 4.14e-04 15_[+5(1.21e-05)]_19_[+1(4.87e-05)]_\ 70 chr3R:7094490-7094610 1.73e-01 120 chr2L:21156767-21156887 2.43e-01 120 chrX:5317370-5317490 1.28e-02 67_[+1(4.87e-05)]_45 chrX:7959143-7959263 5.97e-02 34_[+1(7.06e-05)]_78 chr2R:20278827-20278947 3.27e-01 120 chr2R:14601108-14601228 1.64e-04 72_[+1(4.87e-05)]_22_[+2(6.53e-05)]_\ 10 chr2L:8364325-8364445 5.78e-01 120 chr2R:22635860-22635980 1.90e-01 120 chr2L:9893337-9893457 9.99e-04 50_[+3(4.15e-05)]_33_[+2(2.18e-05)]_\ 21 chr3R:15346143-15346263 3.66e-03 25_[+2(2.18e-05)]_87 chr2R:16347387-16347507 1.74e-02 75_[+1(2.20e-05)]_37 chr2L:2873842-2873962 4.86e-02 71_[+1(4.87e-05)]_41 chr2R:18615005-18615125 9.67e-03 39_[+3(5.36e-05)]_73 chr3R:9631641-9631761 2.67e-02 26_[+1(9.26e-05)]_86 chr2R:8906812-8906932 6.03e-01 120 chrX:11147956-11148076 7.72e-03 88_[+4(7.02e-05)]_24 chrX:17246953-17247073 1.55e-01 82_[+1(7.06e-05)]_30 chr2R:21097244-21097364 2.44e-03 17_[+1(2.20e-05)]_58_[+2(2.18e-05)]_\ 29 chr2L:869745-869865 2.48e-02 102_[+3(6.56e-05)]_10 chr3R:22583148-22583268 5.35e-04 49_[+1(2.20e-05)]_11_[+4(1.20e-05)]_\ 44 chr3L:5777233-5777353 5.70e-03 88_[+4(3.65e-05)]_24 chr2R:5754543-5754663 5.35e-02 17_[+1(2.20e-05)]_95 chr2R:18440053-18440173 4.44e-01 120 chr3R:11231848-11231968 6.05e-03 29_[+3(2.94e-05)]_83 chr2L:20735509-20735629 2.63e-01 120 chr3R:16272313-16272433 5.94e-02 64_[+1(4.87e-05)]_48 chr2R:22483263-22483383 1.27e-03 42_[+2(2.18e-05)]_20_[+1(4.87e-05)]_\ 42 chrX:8116132-8116252 2.53e-03 99_[+1(4.87e-05)]_13 chr2L:16902098-16902218 2.32e-02 94_[+1(4.87e-05)]_18 chr3R:27923038-27923158 2.08e-01 120 chr3L:21335180-21335300 1.41e-02 11_[+2(8.32e-05)]_101 chrX:19616144-19616264 4.47e-04 40_[+2(2.18e-05)]_13_[+1(2.20e-05)]_\ 51 chr2L:7023754-7023874 8.41e-02 41_[+1(9.26e-05)]_71 chr2L:6920642-6920762 1.59e-02 43_[+5(1.21e-05)]_69 chrX:16791146-16791266 4.79e-02 120 chrX:8121075-8121195 6.27e-05 32_[+1(2.20e-05)]_17_[+3(2.94e-05)]_\ 7_[+4(1.20e-05)]_40 chr3R:24877181-24877301 1.32e-03 63_[+3(1.47e-05)]_32_[+1(2.20e-05)]_\ 9 chr3R:5599614-5599734 2.46e-03 78_[+5(5.62e-05)]_34 chr2R:16868287-16868407 4.37e-03 96_[+3(6.56e-05)]_16 chr3R:13780958-13781078 3.26e-04 12_[+1(4.87e-05)]_8_[+3(1.47e-05)]_\ 84 chrX:20391398-20391518 1.39e-04 51_[+5(1.21e-05)]_3_[+1(7.06e-05)]_\ 9_[+3(5.36e-05)]_33 chr3L:14987666-14987786 1.89e-01 120 chrX:13624323-13624443 3.24e-03 41_[+1(2.20e-05)]_71 chr3L:16730731-16730851 1.13e-04 46_[+1(4.87e-05)]_35_[+2(2.18e-05)]_\ 23 chrX:8901648-8901768 9.42e-04 19_[+2(2.18e-05)]_22_[+2(2.18e-05)]_\ 23_[+1(4.87e-05)]_32 chrX:9089879-9089999 9.72e-01 120 chr3R:8805536-8805656 7.59e-02 120 chr2R:21624967-21625087 2.68e-03 74_[+5(2.21e-05)]_38 chr2L:5724887-5725007 2.21e-01 120 chr3R:31736985-31737105 2.24e-05 56_[+5(3.42e-05)]_2_[+3(1.47e-05)]_\ 2_[+1(2.20e-05)]_36 chrX:16599216-16599336 1.80e-04 55_[+5(2.21e-05)]_57 chr2R:14621878-14621998 8.80e-02 92_[+1(7.06e-05)]_20 chr2L:7222952-7223072 1.94e-02 103_[+2(2.18e-05)]_9 chr3R:22446587-22446707 1.43e-04 34_[+1(2.20e-05)]_78 chr2L:9699772-9699892 5.91e-02 45_[+1(4.87e-05)]_67 chr3R:22584722-22584842 3.83e-03 72_[+1(8.06e-05)]_40 chr3R:7246913-7247033 2.94e-03 75_[+3(1.47e-05)]_37 chrX:11349015-11349135 9.84e-02 120 chr2L:12096437-12096557 6.26e-03 21_[+1(4.87e-05)]_91 chr3L:17427114-17427234 6.84e-04 44_[+3(2.94e-05)]_15_[+4(4.84e-05)]_\ 45 chr3R:7188140-7188260 1.18e-01 64_[+1(4.87e-05)]_48 chr2L:4227831-4227951 2.28e-01 120 chr3L:21433920-21434040 5.22e-01 120 chr2R:12871855-12871975 1.29e-02 99_[+4(7.02e-05)]_13 chr2R:10540885-10541005 2.45e-02 80_[+1(4.87e-05)]_32 chr3R:15263118-15263238 6.04e-01 120 chrX:1464154-1464274 1.90e-03 18_[+1(2.20e-05)]_36_[+2(4.36e-05)]_\ 24_[+2(4.36e-05)]_18 chrX:637060-637180 1.65e-01 120 chr3R:27947990-27948110 3.96e-02 120 chr3R:13648032-13648152 8.49e-01 120 chr2R:24668233-24668353 8.95e-03 70_[+1(7.06e-05)]_26_[+3(1.47e-05)]_\ 8 chr3R:28600681-28600801 4.97e-01 120 chr3R:23053255-23053375 2.88e-01 120 chr2R:17420316-17420436 3.77e-01 120 chrX:11108877-11108997 1.93e-01 120 chrX:2585923-2586043 6.03e-04 25_[+5(2.21e-05)]_28_[+4(1.20e-05)]_\ 51 chrX:8905901-8906021 1.53e-01 120 chr3R:21116210-21116330 1.16e-02 56_[+1(2.20e-05)]_56 chr2R:18627914-18628034 4.48e-02 37_[+1(9.26e-05)]_75 chr3R:12196270-12196390 3.17e-01 120 chr3L:262777-262897 9.69e-04 76_[+1(4.87e-05)]_22_[+2(6.53e-05)]_\ 6 chr2L:6709238-6709358 2.20e-03 64_[+1(8.06e-05)]_22_[+4(2.18e-05)]_\ 18 chr3R:11222785-11222905 4.14e-02 36_[+1(2.20e-05)]_76 chr3R:10413272-10413392 4.06e-02 120 chr2R:14860682-14860802 3.89e-03 32_[+1(8.06e-05)]_37_[+3(2.94e-05)]_\ 35 chrX:17422097-17422217 3.33e-02 120 chr2L:12433717-12433837 4.81e-01 120 chr2R:10026995-10027115 3.78e-01 120 chrX:15996989-15997109 1.25e-03 44_[+5(2.21e-05)]_8_[+1(2.20e-05)]_\ 52 chr2R:16868490-16868610 3.40e-01 120 chr2L:4967728-4967848 2.09e-02 46_[+4(1.20e-05)]_66 chr2L:4444685-4444805 7.04e-03 92_[+1(2.20e-05)]_20 chr2L:21143391-21143511 6.82e-01 120 chr3R:16652109-16652229 9.79e-01 120 chr2L:6717557-6717677 2.92e-04 13_[+5(1.21e-05)]_26_[+2(2.18e-05)]_\ 65 chrX:6688920-6689040 4.13e-01 120 chr3R:22035686-22035806 1.76e-04 15_[+2(2.18e-05)]_46_[+1(2.20e-05)]_\ 43 chrX:9162047-9162167 5.13e-04 14_[+2(4.36e-05)]_29_[+4(1.20e-05)]_\ 61 chr3L:21434126-21434246 8.08e-02 120 chrX:5622545-5622665 1.34e-03 9_[+2(4.36e-05)]_[+5(6.61e-05)]_95 chr2L:6024451-6024571 2.44e-02 70_[+4(1.20e-05)]_42 chr3L:3055023-3055143 1.90e-02 120 chr2L:2151936-2152056 6.80e-02 120 chr2R:24187519-24187639 5.80e-03 9_[+1(4.87e-05)]_85_[+3(4.15e-05)]_\ 10 chrX:9164318-9164438 5.32e-03 66_[+3(7.55e-05)]_16_[+1(9.26e-05)]_\ 22 chr3L:13046908-13047028 1.77e-02 72_[+2(4.36e-05)]_40 chr2R:7440650-7440770 1.91e-01 120 chrX:2184599-2184719 6.57e-04 29_[+1(2.20e-05)]_11_[+2(6.53e-05)]_\ 64 chr2R:23556114-23556234 6.22e-04 82_[+3(1.47e-05)]_30 chr2R:19227265-19227385 1.17e-01 120 chr2L:10769814-10769934 3.74e-01 120 chr3R:4753035-4753155 5.03e-03 64_[+1(7.06e-05)]_13_[+1(8.06e-05)]_\ 27 chr3R:13645457-13645577 3.82e-01 120 chrX:6352620-6352740 4.10e-01 120 chrX:4113687-4113807 2.14e-01 120 chr2R:12039011-12039131 8.55e-02 15_[+2(2.18e-05)]_97 chrX:6968655-6968775 1.56e-04 67_[+3(2.94e-05)]_7_[+4(2.18e-05)]_\ 30 chr2L:6920851-6920971 9.12e-01 120 chr2R:6116698-6116818 3.29e-02 120 chr2R:9865595-9865715 1.42e-01 120 chr2L:19063259-19063379 6.69e-02 22_[+2(6.53e-05)]_90 chrX:16289146-16289266 2.73e-01 34_[+4(9.67e-05)]_78 chr2R:8860441-8860561 1.22e-01 120 chr2L:1728712-1728832 2.54e-01 120 chr3L:5899440-5899560 1.78e-01 99_[+5(4.62e-05)]_13 chr2R:15145269-15145389 2.65e-01 120 chr3L:16710761-16710881 8.55e-02 120 chr2R:24780832-24780952 7.77e-02 120 chr3L:833148-833268 1.31e-01 93_[+1(4.87e-05)]_19 chr3R:13388628-13388748 1.22e-04 5_[+2(6.53e-05)]_54_[+1(4.87e-05)]_\ 6_[+4(1.20e-05)]_31 chr2L:12435610-12435730 1.30e-01 120 chr3L:4322077-4322197 3.85e-01 120 chr3R:25476866-25476986 1.23e-02 59_[+2(2.18e-05)]_27_[+2(2.18e-05)]_\ 18 chr2L:564108-564228 1.06e-01 120 chr2R:17789665-17789785 3.90e-02 45_[+1(2.20e-05)]_67 chr2R:11452403-11452523 2.74e-01 120 chr3R:25127262-25127382 6.08e-02 47_[+1(2.20e-05)]_65 chr3R:11412537-11412657 2.55e-01 120 chrX:21117353-21117473 9.28e-02 120 chr3R:9678096-9678216 8.46e-01 120 chr3L:21335379-21335499 7.48e-01 120 chr3R:20592560-20592680 9.55e-02 74_[+1(4.87e-05)]_38 chr2L:20647464-20647584 5.37e-03 88_[+4(4.84e-05)]_24 chrX:15746946-15747066 1.07e-02 58_[+5(4.62e-05)]_54 chr3L:19807253-19807373 5.58e-01 120 chrX:17249439-17249559 1.78e-02 27_[+4(2.18e-05)]_85 chr2R:6657248-6657368 5.26e-01 120 chr2L:271705-271825 4.52e-04 16_[+3(1.47e-05)]_61_[+2(2.18e-05)]_\ 27 chr3R:24233977-24234097 2.59e-01 120 chr3R:13645255-13645375 2.49e-01 120 chr4:834273-834393 2.33e-02 73_[+1(7.06e-05)]_39 chr2L:273611-273731 2.78e-03 63_[+1(4.87e-05)]_15_[+2(2.18e-05)]_\ 26 chr2R:18141284-18141404 7.79e-02 30_[+4(4.84e-05)]_82 chr3L:3223562-3223682 3.93e-01 120 chr3R:23359157-23359277 5.51e-02 84_[+4(1.20e-05)]_28 chr3R:9628742-9628862 3.40e-02 120 chr3R:22491243-22491363 6.63e-01 120 chr3L:324665-324785 3.05e-03 15_[+1(2.20e-05)]_22_[+2(2.18e-05)]_\ 67 chr3R:21777808-21777928 5.53e-02 1_[+1(2.20e-05)]_111 chrX:940882-941002 3.68e-01 120 chr3L:18026091-18026211 1.09e-01 120 chrX:19480853-19480973 2.13e-01 120 chr2R:17518161-17518281 1.95e-04 15_[+3(2.94e-05)]_34_[+5(1.21e-05)]_\ 55 chrX:18515345-18515465 4.73e-03 111_[+3(5.36e-05)]_1 chr3L:9624386-9624506 9.76e-01 120 chr2L:1502712-1502832 2.03e-01 120 chr3R:28812198-28812318 6.84e-01 120 chr2R:12174952-12175072 3.46e-01 120 chr2L:22247709-22247829 6.68e-01 120 chr2R:14171127-14171247 5.96e-01 120 chr2L:20647668-20647788 1.44e-01 120 chr3R:7977161-7977281 4.45e-01 120 chr2R:6156407-6156527 5.88e-02 64_[+1(2.20e-05)]_48 chr2L:252329-252449 2.73e-03 92_[+5(1.21e-05)]_20 chr3L:15498898-15499018 1.15e-04 19_[+4(3.65e-05)]_19_[+3(2.94e-05)]_\ 66 chr3R:31745629-31745749 1.29e-01 120 chr3R:9049296-9049416 1.94e-01 120 chr2R:23907054-23907174 6.97e-02 10_[+1(7.06e-05)]_102 chrX:9684680-9684800 8.20e-01 120 chr2R:22483463-22483583 2.21e-01 120 chr2R:14870709-14870829 7.93e-01 120 chr2R:13198972-13199092 3.11e-01 120 chr2L:109326-109446 4.72e-01 120 chr3R:9003959-9004079 1.03e-03 25_[+4(4.84e-05)]_24_[+2(2.18e-05)]_\ 55 chr2R:17672348-17672468 2.25e-02 3_[+1(2.20e-05)]_109 chr3L:16786812-16786932 8.66e-03 120 chr3R:18301677-18301797 5.15e-03 23_[+1(4.87e-05)]_89 chr2R:14360183-14360303 1.23e-01 120 chr2R:7589842-7589962 3.02e-01 120 chr3R:7080154-7080274 4.62e-01 120 chr3L:4367438-4367558 4.29e-01 120 chr2L:4968969-4969089 2.27e-02 65_[+1(2.20e-05)]_47 chr2L:19034556-19034676 1.28e-02 120 chr2L:12692883-12693003 2.47e-04 37_[+4(2.18e-05)]_37_[+2(8.32e-05)]_\ 30 chr2R:15939780-15939900 4.08e-01 120 chr3L:15507245-15507365 9.81e-01 120 chr3R:14879397-14879517 1.75e-02 26_[+3(1.47e-05)]_86 chr3R:18283583-18283703 1.93e-03 58_[+2(4.36e-05)]_54 chr3R:31218648-31218768 5.82e-01 120 chr3R:29592009-29592129 1.99e-01 120 chrX:16638189-16638309 1.14e-01 120 chr3R:18166515-18166635 5.01e-01 120 chr2R:9113850-9113970 7.75e-04 92_[+1(4.87e-05)]_3_[+4(1.20e-05)]_\ 9 chrX:2241989-2242109 1.43e-02 14_[+2(2.18e-05)]_98 chr2L:18612076-18612196 6.71e-01 120 chr3L:3225461-3225581 1.37e-01 120 chr2R:6746393-6746513 2.86e-01 120 chr2R:8670343-8670463 4.21e-03 6_[+1(2.20e-05)]_11_[+5(3.42e-05)]_\ 87 chr2R:23707047-23707167 9.27e-02 120 chr3R:28811234-28811354 2.33e-01 120 chr2R:23907253-23907373 6.45e-03 72_[+5(1.21e-05)]_40 chr2R:12870435-12870555 3.16e-01 120 chr2R:22066815-22066935 3.82e-01 120 chr3R:6369127-6369247 3.48e-01 120 chr2R:10026792-10026912 2.52e-02 79_[+1(2.20e-05)]_33 chr2L:12038387-12038507 1.31e-01 120 chr2R:24560941-24561061 3.74e-01 120 chrX:12903346-12903466 1.22e-01 120 chrX:1030713-1030833 3.86e-03 40_[+5(1.21e-05)]_72 chr2R:20999275-20999395 6.30e-01 120 chrX:3573545-3573665 2.91e-02 55_[+3(6.56e-05)]_57 chr2R:11452736-11452856 8.49e-01 120 chrX:10745436-10745556 1.85e-01 120 chr3R:31060838-31060958 1.44e-01 101_[+5(9.80e-05)]_11 chr3R:32052832-32052952 9.09e-01 120 chr3R:10761492-10761612 3.90e-01 120 chr3L:21493026-21493146 7.16e-02 73_[+5(1.21e-05)]_39 chr2L:12056243-12056363 8.83e-03 67_[+2(2.18e-05)]_45 chr3L:15098300-15098420 4.38e-01 120 chr2R:17699221-17699341 9.31e-01 120 chr3L:8509935-8510055 3.18e-02 120 chr3R:4429001-4429121 6.67e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n10.farnam.hpc.yale.internal ********************************************************************************