******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/cwo.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3R:10384613-10384733 1.0000 120 chr3R:10381118-10381238 1.0000 120 chr3R:10387087-10387207 1.0000 120 chr3R:9494749-9494869 1.0000 120 chr2R:11773289-11773409 1.0000 120 chr3L:22474451-22474571 1.0000 120 chr2L:19899045-19899165 1.0000 120 chr3R:27294257-27294377 1.0000 120 chr3R:21022908-21023028 1.0000 120 chr3R:16981415-16981535 1.0000 120 chr3R:24275602-24275722 1.0000 120 chrX:12801036-12801156 1.0000 120 chr2R:16134434-16134554 1.0000 120 chr3L:16855392-16855512 1.0000 120 chr3R:17713751-17713871 1.0000 120 chr2R:21118319-21118439 1.0000 120 chr2R:23616379-23616499 1.0000 120 chr2L:11056930-11057050 1.0000 120 chr2R:21614529-21614649 1.0000 120 chr3R:10395556-10395676 1.0000 120 chr3L:16652302-16652422 1.0000 120 chr3R:18432999-18433119 1.0000 120 chr3R:10390044-10390164 1.0000 120 chrX:6738117-6738237 1.0000 120 chrX:16922323-16922443 1.0000 120 chr3R:19625948-19626068 1.0000 120 chr3R:5623777-5623897 1.0000 120 chr3L:18810588-18810708 1.0000 120 chr2R:22426930-22427050 1.0000 120 chr3R:19051284-19051404 1.0000 120 chr3L:16798877-16798997 1.0000 120 chr3R:11570116-11570236 1.0000 120 chr3R:17147786-17147906 1.0000 120 chr2L:12055441-12055561 1.0000 120 chr3R:19793800-19793920 1.0000 120 chr3L:19902031-19902151 1.0000 120 chr2R:11430611-11430731 1.0000 120 chr2L:17471663-17471783 1.0000 120 chr2L:8956548-8956668 1.0000 120 chr2R:7770750-7770870 1.0000 120 chr3R:5073905-5074025 1.0000 120 chr3L:20196467-20196587 1.0000 120 chr2L:6371391-6371511 1.0000 120 chr2L:2010511-2010631 1.0000 120 chr3R:21169659-21169779 1.0000 120 chr2R:10020394-10020514 1.0000 120 chr3L:22870537-22870657 1.0000 120 chr2R:14246735-14246855 1.0000 120 chr3R:4449406-4449526 1.0000 120 chr3L:21839869-21839989 1.0000 120 chr3L:6723374-6723494 1.0000 120 chr2R:14352698-14352818 1.0000 120 chr3R:24563178-24563298 1.0000 120 chr2L:5149766-5149886 1.0000 120 chrX:21065533-21065653 1.0000 120 chr3L:5595349-5595469 1.0000 120 chr3R:17147997-17148117 1.0000 120 chrX:1397956-1398076 1.0000 120 chr2R:21605474-21605594 1.0000 120 chr3R:8528856-8528976 1.0000 120 chr3R:21007148-21007268 1.0000 120 chr2R:23420634-23420754 1.0000 120 chr2R:22079505-22079625 1.0000 120 chr3R:21072201-21072321 1.0000 120 chr3R:11128587-11128707 1.0000 120 chr2L:20879952-20880072 1.0000 120 chr3R:5279727-5279847 1.0000 120 chr3L:5594278-5594398 1.0000 120 chr3R:8520941-8521061 1.0000 120 chr2L:11737824-11737944 1.0000 120 chr3R:10392070-10392190 1.0000 120 chr3R:19620142-19620262 1.0000 120 chr3R:23940963-23941083 1.0000 120 chr3R:31386059-31386179 1.0000 120 chr2R:22179958-22180078 1.0000 120 chrX:18248429-18248549 1.0000 120 chr2L:4389606-4389726 1.0000 120 chr2L:10851600-10851720 1.0000 120 chrX:13635103-13635223 1.0000 120 chr3R:31322456-31322576 1.0000 120 chr3L:2394432-2394552 1.0000 120 chr3R:23589995-23590115 1.0000 120 chr3R:6419212-6419332 1.0000 120 chr3R:9592531-9592651 1.0000 120 chrX:2651858-2651978 1.0000 120 chr3R:25967099-25967219 1.0000 120 chr2L:13292237-13292357 1.0000 120 chr3R:10393090-10393210 1.0000 120 chr2R:9149523-9149643 1.0000 120 chr2L:12620468-12620588 1.0000 120 chr2R:7373240-7373360 1.0000 120 chr2R:6112863-6112983 1.0000 120 chr3R:29082151-29082271 1.0000 120 chr2R:16882442-16882562 1.0000 120 chr3R:30425741-30425861 1.0000 120 chr2R:19339122-19339242 1.0000 120 chr2L:10469162-10469282 1.0000 120 chr3R:26128472-26128592 1.0000 120 chr3L:15539177-15539297 1.0000 120 chr3R:8809921-8810041 1.0000 120 chr2R:17712719-17712839 1.0000 120 chr3L:5818967-5819087 1.0000 120 chr3L:21417061-21417181 1.0000 120 chr2R:12565709-12565829 1.0000 120 chr2L:4893714-4893834 1.0000 120 chr3L:16979652-16979772 1.0000 120 chr2R:19415700-19415820 1.0000 120 chr3L:20524555-20524675 1.0000 120 chrX:18642598-18642718 1.0000 120 chrX:3411619-3411739 1.0000 120 chr2R:23612819-23612939 1.0000 120 chr2L:141005-141125 1.0000 120 chr3L:18922207-18922327 1.0000 120 chr3L:16157089-16157209 1.0000 120 chr3R:22684972-22685092 1.0000 120 chr2R:10277492-10277612 1.0000 120 chrX:4942080-4942200 1.0000 120 chr2L:20879127-20879247 1.0000 120 chr2R:9189895-9190015 1.0000 120 chr2R:14448943-14449063 1.0000 120 chr3R:22776651-22776771 1.0000 120 chr3L:136681-136801 1.0000 120 chr2L:10199127-10199247 1.0000 120 chr3R:9891149-9891269 1.0000 120 chr3R:8108946-8109066 1.0000 120 chr3L:2876848-2876968 1.0000 120 chr2R:14232409-14232529 1.0000 120 chr3R:22046836-22046956 1.0000 120 chr2R:18695647-18695767 1.0000 120 chr3R:10395756-10395876 1.0000 120 chr3R:11244629-11244749 1.0000 120 chr2L:12487972-12488092 1.0000 120 chr3L:7390840-7390960 1.0000 120 chrX:7067524-7067644 1.0000 120 chr3L:12004311-12004431 1.0000 120 chrX:13633690-13633810 1.0000 120 chr3L:10658469-10658589 1.0000 120 chr3R:27137062-27137182 1.0000 120 chr3R:18783341-18783461 1.0000 120 chr3L:5657396-5657516 1.0000 120 chr3R:9878753-9878873 1.0000 120 chr3L:12039156-12039276 1.0000 120 chr2L:19809794-19809914 1.0000 120 chr2L:21296490-21296610 1.0000 120 chr2R:9390306-9390426 1.0000 120 chr3R:27293247-27293367 1.0000 120 chr3L:11125775-11125895 1.0000 120 chr2L:5156542-5156662 1.0000 120 chr2L:20325501-20325621 1.0000 120 chr3L:10867060-10867180 1.0000 120 chr3R:11154912-11155032 1.0000 120 chr2L:18515266-18515386 1.0000 120 chr3R:9049230-9049350 1.0000 120 chrX:2654098-2654218 1.0000 120 chr3L:11050689-11050809 1.0000 120 chr3R:16014742-16014862 1.0000 120 chrX:15520995-15521115 1.0000 120 chr3L:17615711-17615831 1.0000 120 chr2L:13434915-13435035 1.0000 120 chr3L:16769067-16769187 1.0000 120 chr2L:7023740-7023860 1.0000 120 chr3R:7506730-7506850 1.0000 120 chr3R:18621433-18621553 1.0000 120 chr3L:17742688-17742808 1.0000 120 chr2L:13804678-13804798 1.0000 120 chr3L:11543303-11543423 1.0000 120 chr3R:28846041-28846161 1.0000 120 chr3L:18952688-18952808 1.0000 120 chr2L:8098483-8098603 1.0000 120 chr3L:14548525-14548645 1.0000 120 chr3L:2530157-2530277 1.0000 120 chrX:7303908-7304028 1.0000 120 chrX:11464161-11464281 1.0000 120 chr2R:23429135-23429255 1.0000 120 chr2R:18717357-18717477 1.0000 120 chr2L:21623090-21623210 1.0000 120 chrX:11922756-11922876 1.0000 120 chr2R:8705402-8705522 1.0000 120 chr3R:10185427-10185547 1.0000 120 chr3R:31461425-31461545 1.0000 120 chr2R:24984908-24985028 1.0000 120 chrX:11881940-11882060 1.0000 120 chr3R:27007155-27007275 1.0000 120 chr2R:11786227-11786347 1.0000 120 chr3L:18993005-18993125 1.0000 120 chrX:1229652-1229772 1.0000 120 chr3R:8353505-8353625 1.0000 120 chr2L:16789991-16790111 1.0000 120 chr2R:7988747-7988867 1.0000 120 chr3L:9775843-9775963 1.0000 120 chr3R:24285766-24285886 1.0000 120 chr2R:9561425-9561545 1.0000 120 chr3R:29158770-29158890 1.0000 120 chr2R:11657266-11657386 1.0000 120 chr3L:6723580-6723700 1.0000 120 chrX:13636677-13636797 1.0000 120 chr3R:20891871-20891991 1.0000 120 chr2L:19402045-19402165 1.0000 120 chr3R:17707163-17707283 1.0000 120 chr2R:21721076-21721196 1.0000 120 chr3R:14445206-14445326 1.0000 120 chr2R:11667844-11667964 1.0000 120 chr3L:1098556-1098676 1.0000 120 chr3L:5594480-5594600 1.0000 120 chr2L:6169215-6169335 1.0000 120 chr2R:16667962-16668082 1.0000 120 chr2R:6643992-6644112 1.0000 120 chr2R:12479554-12479674 1.0000 120 chr3L:12803464-12803584 1.0000 120 chr2R:19287103-19287223 1.0000 120 chr3R:26227005-26227125 1.0000 120 chr2R:25024139-25024259 1.0000 120 chrX:3444048-3444168 1.0000 120 chr3L:1739005-1739125 1.0000 120 chrX:9872992-9873112 1.0000 120 chr3L:19139258-19139378 1.0000 120 chr2L:8104861-8104981 1.0000 120 chr3L:17958369-17958489 1.0000 120 chr2L:7027661-7027781 1.0000 120 chr2R:15863584-15863704 1.0000 120 chr2R:16131969-16132089 1.0000 120 chr2L:1669419-1669539 1.0000 120 chr3R:16353417-16353537 1.0000 120 chr3R:24563378-24563498 1.0000 120 chr3R:24275806-24275926 1.0000 120 chr3R:16870850-16870970 1.0000 120 chr2R:16669719-16669839 1.0000 120 chr2L:2801519-2801639 1.0000 120 chr3R:26213080-26213200 1.0000 120 chr2R:21075550-21075670 1.0000 120 chrX:757050-757170 1.0000 120 chr3L:3346467-3346587 1.0000 120 chr3R:8112097-8112217 1.0000 120 chrX:3440697-3440817 1.0000 120 chr2L:4889338-4889458 1.0000 120 chr3R:5841464-5841584 1.0000 120 chr3R:20961083-20961203 1.0000 120 chrX:3379465-3379585 1.0000 120 chr2R:11384454-11384574 1.0000 120 chr3R:30431451-30431571 1.0000 120 chr3L:10482635-10482755 1.0000 120 chr3R:22536274-22536394 1.0000 120 chr2L:3055746-3055866 1.0000 120 chr3R:25238933-25239053 1.0000 120 chr3L:11684627-11684747 1.0000 120 chrX:8490450-8490570 1.0000 120 chr2L:21062702-21062822 1.0000 120 chr2L:10529111-10529231 1.0000 120 chr3L:9776909-9777029 1.0000 120 chr3L:3253796-3253916 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_cwo/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/cwo.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.265 C 0.228 G 0.232 T 0.275 Background letter frequencies (from file dataset with add-one prior applied): A 0.265 C 0.228 G 0.232 T 0.275 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF DCACGTGH MEME-1 width = 8 sites = 218 llr = 1677 E-value = 2.2e-215 ******************************************************************************** -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 Description -------------------------------------------------------------------------------- Simplified A 219::::3 pos.-specific C :9:a:1:4 probability G 3:1:a:a: matrix T 4::::9:2 bits 2.1 * 1.9 ** * 1.7 * ** * 1.5 * **** Relative 1.3 ****** Entropy 1.1 ****** (11.1 bits) 0.9 ****** 0.6 ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCACGTGC consensus G A sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:9776909-9777029 10 2.36e-05 ACTTGTAAG TCACGTGC TGCCGCTCGC chrX:8490450-8490570 8 2.36e-05 AAACAAA GCACGTGC TTGTGCGAGT chr3R:30431451-30431571 77 2.36e-05 ATAAGTGTAA GCACGTGC ACACGATTCT chr2L:7027661-7027781 81 2.36e-05 CGATCTTCAA GCACGTGC ATTTCGTTCA chr2R:25024139-25024259 71 2.36e-05 CTGCCCATTG TCACGTGC CCTCGTGCAG chr3R:26227005-26227125 58 2.36e-05 ATTAACCAGA TCACGTGC CCTGTGAGTC chr3L:12803464-12803584 47 2.36e-05 CAAAATAATC GCACGTGC GTGTGGCTCC chr2R:6643992-6644112 11 2.36e-05 CAGCAGTTAA GCACGTGC TAGAGGAGCT chr3R:17707163-17707283 65 2.36e-05 CGAGTCAAGT TCACGTGC TGTTCACGCA chr3L:6723580-6723700 61 2.36e-05 ttatttTACG TCACGTGC TGCAAACCAA chr2L:21623090-21623210 33 2.36e-05 TCAAGTTTCG TCACGTGC TAAAAAATGT chr2R:18717357-18717477 32 2.36e-05 ACACAAAAAT TCACGTGC TTCGCATGCA chr3L:2530157-2530277 56 2.36e-05 ATCTGACACC TCACGTGC CCCTCGAAAA chr3L:14548525-14548645 91 2.36e-05 GGCATGCCGC TCACGTGC CCCGATAAGA chr2L:8098483-8098603 69 2.36e-05 AACTGTGCTT TCACGTGC GCAGCGCCTG chr3L:18952688-18952808 90 2.36e-05 CAGGCTTCGG TCACGTGC TCGTCTCCTC chr3R:28846041-28846161 30 2.36e-05 CCGCTGGGCG TCACGTGC GCGGCCTTTG chr3R:16014742-16014862 74 2.36e-05 GCGGTACATG GCACGTGC ATGGGGGCCT chr2L:5156542-5156662 24 2.36e-05 TTACCATTTG TCACGTGC TGCGGCCCAA chr2L:19809794-19809914 24 2.36e-05 ATGGGCCAAG TCACGTGC TGCCATTGAA chr3R:27137062-27137182 81 2.36e-05 TAAAGCCCGA TCACGTGC CTTCGTTTTC chr3L:10658469-10658589 45 2.36e-05 GATCATGTGG GCACGTGC GTGAGTCAGG chr2L:12487972-12488092 17 2.36e-05 CATTCATGTT TCACGTGC TAATCGTGTA chr2R:18695647-18695767 48 2.36e-05 CGCAAATCAG TCACGTGC GTTCGCTCTC chr3R:8108946-8109066 60 2.36e-05 TTTTGCTTTG GCACGTGC TGTGAGATAA chr3R:9891149-9891269 38 2.36e-05 CATGCTGCCA TCACGTGC TGTTGCTTGA chr2L:10199127-10199247 101 2.36e-05 GGGGGATCGC GCACGTGC GCGATGGGAA chr2R:14448943-14449063 79 2.36e-05 AAGATTCGCA GCACGTGC TGCCAACAGC chrX:3411619-3411739 89 2.36e-05 CATAGCAGCA GCACGTGC GGCTCAAAAA chrX:18642598-18642718 101 2.36e-05 TTCGTTTTAA TCACGTGC AAAGGGCGGC chr2R:12565709-12565829 7 2.36e-05 TCGTTA GCACGTGC CCAGCCGCAC chr3L:15539177-15539297 67 2.36e-05 AGCGATAATG TCACGTGC CCTGCATTTC chr2R:16882442-16882562 59 2.36e-05 GGCGTATGCG TCACGTGC TGCCTAGTGG chr3R:29082151-29082271 96 2.36e-05 TCGTTGACTT TCACGTGC GACGGGCGTT chrX:2651858-2651978 13 2.36e-05 TTATCACTTA TCACGTGC TTCCCCAAAC chr3R:6419212-6419332 30 2.36e-05 AGCGGTCGCC TCACGTGC GCTGCCTTCG chr3R:31322456-31322576 36 2.36e-05 TTAGCATAAA GCACGTGC GCCTGCCTCA chr3R:19620142-19620262 65 2.36e-05 TGTGGCACGA GCACGTGC AGATGACGAT chr3R:5279727-5279847 53 2.36e-05 CGCCACTTCG GCACGTGC TCGGCACAAT chr3R:21072201-21072321 71 2.36e-05 TGAATCAGAA TCACGTGC CGCATTCCCG chr2R:23420634-23420754 61 2.36e-05 GCTGGATGGC GCACGTGC TGGATGATTT chr2L:5149766-5149886 95 2.36e-05 CGCTAATTAA TCACGTGC CAAAAGTTTG chr3L:6723374-6723494 1 2.36e-05 . TCACGTGC TGTGGAAACC chr2R:14246735-14246855 42 2.36e-05 AGTTATGGTT TCACGTGC AGCCATTAAA chr2R:10020394-10020514 56 2.36e-05 AGTTTTGGGC TCACGTGC CGCGTCCGCT chr2L:6371391-6371511 73 2.36e-05 GGGTTCCATG TCACGTGC GCTCGCTCGG chr3R:5073905-5074025 36 2.36e-05 CGATAATAAC TCACGTGC TCCCGCCATC chr3R:19793800-19793920 44 2.36e-05 TACGTTCTCA GCACGTGC TTGTGCCGGC chr3R:17147786-17147906 68 2.36e-05 CTCTTGATCA GCACGTGC AGGGGCAATG chr2R:22426930-22427050 69 2.36e-05 TGCTGTAACA TCACGTGC GGTTGAGCTT chr2L:11056930-11057050 34 2.36e-05 TAATTGGCGG TCACGTGC CCAGCTTCCC chr3R:17713751-17713871 66 2.36e-05 AAAAATCATA TCACGTGC TTCTCCATTG chr3R:16981415-16981535 71 2.36e-05 TGTCGCAGTG TCACGTGC TGTTTTTATA chr2L:19899045-19899165 58 2.36e-05 ATTTGGAGCA GCACGTGC ATTTGCACGT chr3L:22474451-22474571 73 2.36e-05 TATAGCGCCA GCACGTGC GTGGCAACAG chr3L:3253796-3253916 63 5.10e-05 GAGGCCGTCT GCACGTGA TCCGGCGATC chr3R:25238933-25239053 91 5.10e-05 AACAGGCAGC TCACGTGA TGGAACGATT chr2L:4889338-4889458 78 5.10e-05 GATATGTCCG TCACGTGA GACGATCGCA chr2R:16669719-16669839 72 5.10e-05 TAGCGCACGT TCACGTGA TGGGCACGCC chr2R:15863584-15863704 50 5.10e-05 TTGTTTGCTA GCACGTGA ACATTATCAA chr3L:19139258-19139378 62 5.10e-05 GAAGCTTTTA GCACGTGA GCCATGTGTG chr2R:19287103-19287223 14 5.10e-05 GATTCTGTAT TCACGTGA GTTTCGAATC chr2R:12479554-12479674 79 5.10e-05 GGGAATGGGA GCACGTGA TCTCCACCCT chr2R:16667962-16668082 77 5.10e-05 CGTGTGCCGC TCACGTGA GCACACTCGC chr3L:1098556-1098676 43 5.10e-05 GGAACGTGGA GCACGTGA ATGCTGTCAA chr2R:9561425-9561545 41 5.10e-05 CATAAGAAAG GCACGTGA GTGTGTTTTG chr3R:24285766-24285886 83 5.10e-05 GGTGGGGGAG TCACGTGA AAATAAAAAA chrX:11922756-11922876 40 5.10e-05 TCAACACTGA GCACGTGA ATGGAACTGC chr2L:18515266-18515386 75 5.10e-05 TTAGCATTAA GCACGTGA CGCCGACTTG chr2R:9390306-9390426 104 5.10e-05 AAACAAAAAA GCACGTGA ACAGTTTTA chr3R:11244629-11244749 90 5.10e-05 GACGCCCGCT GCACGTGA CCCGTCAGCC chr3L:136681-136801 37 5.10e-05 TTGGGGACGC TCACGTGA CCCTTTTGTT chr2R:9189895-9190015 57 5.10e-05 AGTCAAGTGG TCACGTGA TTAAAAACGA chr2L:12620468-12620588 16 5.10e-05 CTTATGTGGA GCACGTGA CGCAAGTGAC chr3R:9592531-9592651 73 5.10e-05 GATAGCCAAG TCACGTGA GAGGCCTTCC chrX:13635103-13635223 64 5.10e-05 TTGGCCCAAG TCACGTGA CGTGCGCGTG chr2L:4389606-4389726 112 5.10e-05 AAATCTAGAG TCACGTGA A chr3R:23940963-23941083 80 5.10e-05 AACGTGACTA TCACGTGA ACAAAGCCGA chr2L:11737824-11737944 47 5.10e-05 ACCAACAGGA GCACGTGA CTCACGATAA chr3R:11128587-11128707 100 5.10e-05 CGCGTTCCCG GCACGTGA TGGAATGAGT chr2R:22079505-22079625 82 5.10e-05 AGCATGGTGC GCACGTGA GAAGTGCCAA chr3R:21007148-21007268 37 5.10e-05 TAGATTTATA GCACGTGA GTATGGGGAC chr2R:21605474-21605594 71 5.10e-05 TGTACTTGGG GCACGTGA CGGCCGAGCT chr3R:4449406-4449526 43 5.10e-05 TCCAATCTCA TCACGTGA TGCGACTAGG chr2R:7770750-7770870 67 5.10e-05 TAGTCGAGCA GCACGTGA TGTTGACTCA chr2L:17471663-17471783 52 5.10e-05 CAAAACAACA GCACGTGA CCATATGGCC chr2R:11430611-11430731 65 5.10e-05 CACAAACGCT GCACGTGA CTGTTTGAAC chrX:16922323-16922443 31 5.10e-05 CGAGATTCAT GCACGTGA CCAGCAAAAA chr2R:23616379-23616499 42 5.10e-05 ACGCTTATGC GCACGTGA CGCATACTCA chr3R:27294257-27294377 54 5.10e-05 TTCGCCAAGA GCACGTGA GTTGCGCGTC chr2L:1669419-1669539 42 6.33e-05 TAGCGCACAC ACACGTGC GCGCAAATAA chr2R:21721076-21721196 69 6.33e-05 CGCCACCCGG ACACGTGC CTCCCCGTCA chr2R:23429135-23429255 97 6.33e-05 TAAAAAGCGA ACACGTGC AGATAAACGT chr3R:18783341-18783461 66 6.33e-05 TTTTATATTT ACACGTGC TTATCAAATG chr3R:31386059-31386179 108 6.33e-05 TCATAGGCAC ACACGTGC CATCC chr3R:8520941-8521061 41 6.33e-05 AGCAAAGTTC ACACGTGC TGCGTAAGCA chr2L:2010511-2010631 17 6.33e-05 CTTTCTTAAC ACACGTGC TGCAAAAAAA chr2R:21118319-21118439 62 6.33e-05 AGTTTTAGGC ACACGTGC ATGAACAGAA chr3L:16855392-16855512 73 6.33e-05 GCGCCGTTCC ACACGTGC CGCCAAGAGG chrX:12801036-12801156 43 6.33e-05 CTCTCAGTGT ACACGTGC TTGTTTGTGG chr3R:8112097-8112217 96 9.17e-05 TAATGTCTTG GCACGTGT GCACGAGCTT chrX:757050-757170 67 9.17e-05 CAGACACTCG GCACGTGT GAGGGATACT chr3R:20891871-20891991 25 9.17e-05 GGCATAAGAG GCACGTGT TATTTTATGA chr3R:29158770-29158890 43 9.17e-05 CTATTCTGTA GCACGTGT TCTCACCATA chr3L:9775843-9775963 34 9.17e-05 TTAACCTTTC GCACGTGT CCGTCTCGCC chr3L:18993005-18993125 101 9.17e-05 GCAAACAAGA TCACGTGT TGTACTGGGG chr2R:8705402-8705522 18 9.17e-05 TCATATAAGT TCACGTGT TCCCAAACAA chr3L:17742688-17742808 81 9.17e-05 GTTTTACATC TCACGTGT TGTTGAGAAA chrX:2654098-2654218 87 9.17e-05 ATTGCGACAT GCACGTGT GGTTTTGGCA chr3R:9049230-9049350 45 9.17e-05 AATGAGCCTC GCACGTGT TTGTATATTT chr3L:10867060-10867180 60 9.17e-05 ATATCTGCGA GCACGTGT TTCCGATGGC chr2L:21296490-21296610 80 9.17e-05 ATATTTCGCA GCACGTGT GTGGTGCTTT chr3R:9878753-9878873 89 9.17e-05 CATGTGATGG TCACGTGT GCGTGTGTGC chr2L:20879127-20879247 20 9.17e-05 ACGTCAGAGA GCACGTGT CGAGTTATTT chrX:4942080-4942200 34 9.17e-05 TATTCATAAC TCACGTGT TTCTGGCACT chr2R:10277492-10277612 92 9.17e-05 AACCACCACA TCACGTGT CTGGTTCGTC chr3L:18922207-18922327 20 9.17e-05 TTTGATTGCT TCACGTGT CCCCAGATTC chr3L:5818967-5819087 6 9.17e-05 GCATA TCACGTGT CTGGTGGGCG chr2R:17712719-17712839 39 9.17e-05 TTAATGTCTG TCACGTGT TTTTTCGAGT chr3R:8809921-8810041 64 9.17e-05 AAAGCGCAAG TCACGTGT TCGCCGAGAT chr3R:10393090-10393210 14 9.17e-05 AATCCATCCG GCACGTGT GCACGTTTGT chr3L:2394432-2394552 6 9.17e-05 TTGCC GCACGTGT GCCAGCTGGa chr2L:10851600-10851720 14 9.17e-05 CTTCTCCGCC GCACGTGT CACTTTCGCC chr2L:20879952-20880072 77 9.17e-05 AGTTTTATGC TCACGTGT TGGCATTATT chr3R:24563178-24563298 59 9.17e-05 ATTGATGGGC TCACGTGT CCATAAGTTG chr2R:14352698-14352818 89 9.17e-05 CCGTCTTAAA TCACGTGT GATAAGAGAT chr3L:20196467-20196587 71 9.17e-05 GCCATCTCCA GCACGTGT ACAGCTCTTT chr3L:18810588-18810708 33 9.17e-05 AATACTATAG TCACGTGT GGACTGATTA chr3R:5623777-5623897 31 9.17e-05 TGCTCCCAGA TCACGTGT GGAAATCTCT chr3R:10384613-10384733 97 9.17e-05 AGCTGCGGGC GCACGTGT CGTTGCCCCT chr2L:8104861-8104981 48 1.06e-04 CGGAAAAACA ACACGTGA CGAGTGGCTG chr2L:16789991-16790111 55 1.06e-04 TAGGGCTGCG ACACGTGA AATGTAAGAT chr3R:11154912-11155032 82 1.06e-04 CTGATAAGGA ACACGTGA AAGTTGCCCA chr3R:25967099-25967219 24 1.06e-04 GGCTGGGCAA ACACGTGA CAGGGCGGCA chr3R:23589995-23590115 50 1.06e-04 ACCTTATCGT ACACGTGA CAATAGCTTT chr3R:21169659-21169779 62 1.06e-04 AAAACCCAAA ACACGTGA CTGCGCCATC chrX:6738117-6738237 31 1.06e-04 ACAATACGCA ACACGTGA ATCGCGGATC chrX:3379465-3379585 49 1.21e-04 CTTTATTCGC ACACGTGT AGCAATAAAT chrX:13633690-13633810 79 1.21e-04 CGGCTACGCG ACACGTGT AGCACCCGTT chr2L:141005-141125 46 1.21e-04 CTGATAACAA ACACGTGT AAATAACGAG chr3L:21417061-21417181 93 1.21e-04 GATGGGGGCC ACACGTGT GTTCGTTTTT chr3L:16652302-16652422 65 1.21e-04 CGCGGGAACG ACACGTGT TTGGGAAACA chr3R:21022908-21023028 31 1.21e-04 TGAACTTCAG ACACGTGT GTGCGGCAGT chr2R:11384454-11384574 29 1.48e-04 TGAAACACGC TAACGTGC TTTTCATTTG chr2L:13434915-13435035 24 1.48e-04 TGTTTTCTGT GAACGTGC AAGCACTTGA chr3R:5841464-5841584 75 1.80e-04 TTCTGAACGT GAACGTGA ATCGAGTGGC chr3L:11050689-11050809 67 1.80e-04 CCAGACACCA GAACGTGA GAATCAACGT chr3R:11570116-11570236 56 1.80e-04 GGGGAGCATA TAACGTGA CAACACTGAC chrX:1229652-1229772 83 2.01e-04 TGTGGCAAAG TCGCGTGC TGGCCCATTC chr3R:31461425-31461545 73 2.01e-04 ACGTGACAAG GCGCGTGC TCACACATAA chr3R:18621433-18621553 67 2.01e-04 GACCACCAAG TCGCGTGC TTGTGACTCA chr3R:7506730-7506850 58 2.01e-04 CTGGGAACGA TCGCGTGC TCTGGGTTCG chrX:18248429-18248549 36 2.01e-04 gCCAAGTTTA TCGCGTGC CAACGCCAAC chr2R:21075550-21075670 85 2.35e-04 TTCGAGATGA AAACGTGC TGTTGTTTGG chr2L:7023740-7023860 74 2.35e-04 TGATCGAAAA GCACGCGC AATTCGAAGT chr3L:2876848-2876968 61 2.35e-04 GGATGAAATG AAACGTGC TGTGGGGCCC chr3R:10392070-10392190 82 2.35e-04 CACGGGAGGC AAACGTGC CGCAGATATT chr3R:8528856-8528976 102 2.35e-04 ACCCCGTTGA AAACGTGC CGCCTCTAAA chr3L:22870537-22870657 68 2.35e-04 AGTACGCAAG AAACGTGC GGGCTGAGAA chr2R:11773289-11773409 63 2.35e-04 CGCGTTTTAA AAACGTGC TTTGCGATAG chr3R:9494749-9494869 68 2.35e-04 GTGGCGGAGG AAACGTGC TGGGCAGCGT chr3L:11543303-11543423 97 2.92e-04 GAAAACGCGA TCGCGTGA GTTTTTCGAC chr3L:5594278-5594398 103 2.92e-04 GGCCTCGAAG TCGCGTGA TGATTGCAGA chr3L:21839869-21839989 51 2.92e-04 CCGCGTCAAG TCGCGTGA TTTTGATAAC chrX:3444048-3444168 50 3.31e-04 GCCACTTGAG GCACGCGA TTAACTTGAC chr2L:6169215-6169335 48 3.31e-04 CACAACAAAA GCACGCGA CTTGGCTTAT chr3L:17615711-17615831 9 3.31e-04 CCAAATCC AAACGTGA CTTAAGGTTA chrX:15520995-15521115 46 3.31e-04 GCAGCGCAAG TCACGCGA CATCGGCTTt chr3L:12039156-12039276 5 3.31e-04 CCAA AAACGTGA TCGAGCTGAC chr3L:12004311-12004431 66 3.31e-04 AATTCTTCGT TCACGCGA TCGTTTTTCA chr2R:23612819-23612939 29 3.31e-04 TGGCGATGGT GCACGCGA TTCGCAACTC chr3R:30425741-30425861 74 3.31e-04 CTCTATGACT AAACGTGA CCTGATACTG chr2R:7373240-7373360 58 3.31e-04 AAAAAACAAA AAACGTGA CTCAGCAGAA chr2R:9149523-9149643 88 3.31e-04 TGAGTCATGG AAACGTGA CGACCGCTTG chr2L:13292237-13292357 81 3.31e-04 GCAAATCGAT AAACGTGA CGACTTCCAA chr3L:5595349-5595469 69 3.31e-04 GAGTGCCTAA AAACGTGA GTATCACGGT chr3R:19625948-19626068 86 3.31e-04 AATGAGTCAA AAACGTGA CTTAACTTTT chr3R:10390044-10390164 56 3.31e-04 acgactcgca aaacGTGA TGTTTCGTTG chr3L:7390840-7390960 61 3.52e-04 AATGGTCAAG ACGCGTGC CCAAAATCTC chr3R:22536274-22536394 23 3.87e-04 TAAATTCTAG ACACGCGC CGTGCAAAAG chr3R:16870850-16870970 43 3.87e-04 TGTAACCGGC TCGCGTGT TAGTCGCGCG chr2R:7988747-7988867 60 3.87e-04 CGAAAGTCGG TCGCGTGT GAAACGCCTG chr2R:19415700-19415820 98 3.87e-04 CGCGTGTGAG TCGCGTGT CTTGAATTAC chr2L:21062702-21062822 70 4.56e-04 CCGATACGAG TCACGCGT ATGCAAATAG chr3R:24275602-24275722 4 4.56e-04 TTG AAACGTGT TTCCGCTGTG chr3L:1739005-1739125 65 5.04e-04 GTGCAGCGAA CCACGTGA GTTGGCCACG chrX:13636677-13636797 4 5.04e-04 CAT CCACGTGA TGCCAAAAAA chr3R:27293247-27293367 100 5.04e-04 GGCCTACGGA GCACGAGC TTCCAGGTCG chr3R:22684972-22685092 60 5.04e-04 AGCGGGTCAG CCACGTGA TCTAGATGGG chr3R:26128472-26128592 72 5.16e-04 TTTTTTGCCC ACACGCGA TGACCACATT chr3R:19051284-19051404 8 5.68e-04 ACTGAAG TCCCGTGC AGGTGTTCAT chrX:11464161-11464281 41 6.21e-04 GTGTCAAGTG GCACGAGA TACAAATTAT chr3R:16353417-16353537 57 6.48e-04 CATGCCGTTT ACACGCGT TTCGCACGGG chrX:3440697-3440817 10 7.45e-04 GAATGCCAA ACACGAGC CACTGGCATG chr3R:26213080-26213200 49 7.45e-04 AAAACTTATC GCACGTTT TCGGTGTGCT chr2R:11786227-11786347 43 7.45e-04 ATCTGCTGTG GCCCGTGA CTTTGGCCAA chr2L:13804678-13804798 46 7.45e-04 GGGGAGTTTC ACACGAGC TGGGTCTCGT chrX:7067524-7067644 87 7.45e-04 GCAGACAAAC TCACGTTT TCGTTCTTAC chr3R:22046836-22046956 34 7.45e-04 CGCCGCTGGA GCACGTTT CTTCGCCCGA chr3L:20524555-20524675 43 7.45e-04 TATCAGCATA GCACGTTT TTCGATGGGG chr2L:8956548-8956668 63 7.45e-04 TGCTTCTTTG TCACGTTT TTGTCGAGTG chr2R:16134434-16134554 58 7.45e-04 TCCGGGGTAG TCACGTTT GACGGTTTTT chr2L:10529111-10529231 47 7.97e-04 GGCTTTGACA TCTCGTGC GTAAGTGATT chr3R:14445206-14445326 22 7.97e-04 GCTTAGCTGG TCTCGTGC TGGAGGCACT chrX:1397956-1398076 79 7.97e-04 CGTAGCAGCA TCTCGTGC CCCGTCCTCG chrX:21065533-21065653 104 7.97e-04 ATCGTGCAGG TCACGAGT TTGGCGTCT chr2L:3055746-3055866 60 8.25e-04 GAACATTCTG ACCCGTGC TGGCTGGCTT chr3L:5657396-5657516 78 9.20e-04 TGGTCGCGAG TCACGTGG CCACTGACAA chr2R:14232409-14232529 60 9.20e-04 ATTATTTAAC GCATGTGA TTCCCTTGCA chr3L:16979652-16979772 43 9.20e-04 TTACGATGCC GCATGTGA GGCAGAAGAA chr2L:4893714-4893834 18 9.20e-04 TCAGGTACAA ACACGAGA CACCGGCGGC chr3L:16798877-16798997 49 9.20e-04 CATCGACAAG TCCCGTGT TCGTTCCGTG chr3R:18432999-18433119 109 9.20e-04 GATACCGCAG TCATGTGA GCGA chr3L:17958369-17958489 105 9.93e-04 GAGAGCCGGG ACACGTTT TTTTTTTG chr3L:19902031-19902151 85 9.93e-04 AACTACCGTC ACACGTTT TCATTGGGTT chr3R:20961083-20961203 20 1.24e-03 GATGCCATGT GAACGCGA CAGGTTTGCG chr3R:27007155-27007275 42 1.30e-03 TAAGAGTGGA ACATGTGT TTGGGCAATC chr2R:16131969-16132089 102 1.49e-03 ACTGCTGGCG AAGCGTGA GAAGTGACAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:9776909-9777029 2.4e-05 9_[+1]_103 chrX:8490450-8490570 2.4e-05 7_[+1]_105 chr3R:30431451-30431571 2.4e-05 76_[+1]_36 chr2L:7027661-7027781 2.4e-05 80_[+1]_32 chr2R:25024139-25024259 2.4e-05 70_[+1]_42 chr3R:26227005-26227125 2.4e-05 57_[+1]_55 chr3L:12803464-12803584 2.4e-05 46_[+1]_66 chr2R:6643992-6644112 2.4e-05 10_[+1]_102 chr3R:17707163-17707283 2.4e-05 64_[+1]_48 chr3L:6723580-6723700 2.4e-05 60_[+1]_52 chr2L:21623090-21623210 2.4e-05 32_[+1]_80 chr2R:18717357-18717477 2.4e-05 31_[+1]_81 chr3L:2530157-2530277 2.4e-05 55_[+1]_57 chr3L:14548525-14548645 2.4e-05 90_[+1]_22 chr2L:8098483-8098603 2.4e-05 68_[+1]_44 chr3L:18952688-18952808 2.4e-05 89_[+1]_23 chr3R:28846041-28846161 2.4e-05 29_[+1]_83 chr3R:16014742-16014862 2.4e-05 73_[+1]_39 chr2L:5156542-5156662 2.4e-05 23_[+1]_89 chr2L:19809794-19809914 2.4e-05 23_[+1]_89 chr3R:27137062-27137182 2.4e-05 80_[+1]_32 chr3L:10658469-10658589 2.4e-05 44_[+1]_68 chr2L:12487972-12488092 2.4e-05 16_[+1]_96 chr2R:18695647-18695767 2.4e-05 47_[+1]_65 chr3R:8108946-8109066 2.4e-05 59_[+1]_53 chr3R:9891149-9891269 2.4e-05 37_[+1]_75 chr2L:10199127-10199247 2.4e-05 100_[+1]_12 chr2R:14448943-14449063 2.4e-05 78_[+1]_34 chrX:3411619-3411739 2.4e-05 88_[+1]_24 chrX:18642598-18642718 2.4e-05 100_[+1]_12 chr2R:12565709-12565829 2.4e-05 6_[+1]_106 chr3L:15539177-15539297 2.4e-05 66_[+1]_46 chr2R:16882442-16882562 2.4e-05 58_[+1]_54 chr3R:29082151-29082271 2.4e-05 95_[+1]_17 chrX:2651858-2651978 2.4e-05 12_[+1]_100 chr3R:6419212-6419332 2.4e-05 29_[+1]_83 chr3R:31322456-31322576 2.4e-05 35_[+1]_77 chr3R:19620142-19620262 2.4e-05 64_[+1]_48 chr3R:5279727-5279847 2.4e-05 52_[+1]_60 chr3R:21072201-21072321 2.4e-05 70_[+1]_42 chr2R:23420634-23420754 2.4e-05 60_[+1]_52 chr2L:5149766-5149886 2.4e-05 94_[+1]_18 chr3L:6723374-6723494 2.4e-05 [+1]_112 chr2R:14246735-14246855 2.4e-05 41_[+1]_71 chr2R:10020394-10020514 2.4e-05 55_[+1]_57 chr2L:6371391-6371511 2.4e-05 72_[+1]_40 chr3R:5073905-5074025 2.4e-05 35_[+1]_77 chr3R:19793800-19793920 2.4e-05 43_[+1]_69 chr3R:17147786-17147906 2.4e-05 67_[+1]_45 chr2R:22426930-22427050 2.4e-05 68_[+1]_44 chr2L:11056930-11057050 2.4e-05 33_[+1]_79 chr3R:17713751-17713871 2.4e-05 65_[+1]_47 chr3R:16981415-16981535 2.4e-05 70_[+1]_42 chr2L:19899045-19899165 2.4e-05 57_[+1]_55 chr3L:22474451-22474571 2.4e-05 72_[+1]_40 chr3L:3253796-3253916 5.1e-05 62_[+1]_50 chr3R:25238933-25239053 5.1e-05 90_[+1]_22 chr2L:4889338-4889458 5.1e-05 77_[+1]_35 chr2R:16669719-16669839 5.1e-05 71_[+1]_41 chr2R:15863584-15863704 5.1e-05 49_[+1]_63 chr3L:19139258-19139378 5.1e-05 61_[+1]_51 chr2R:19287103-19287223 5.1e-05 13_[+1]_99 chr2R:12479554-12479674 5.1e-05 78_[+1]_34 chr2R:16667962-16668082 5.1e-05 76_[+1]_36 chr3L:1098556-1098676 5.1e-05 42_[+1]_70 chr2R:9561425-9561545 5.1e-05 40_[+1]_72 chr3R:24285766-24285886 5.1e-05 82_[+1]_30 chrX:11922756-11922876 5.1e-05 39_[+1]_73 chr2L:18515266-18515386 5.1e-05 74_[+1]_38 chr2R:9390306-9390426 5.1e-05 103_[+1]_9 chr3R:11244629-11244749 5.1e-05 89_[+1]_23 chr3L:136681-136801 5.1e-05 36_[+1]_76 chr2R:9189895-9190015 5.1e-05 56_[+1]_56 chr2L:12620468-12620588 5.1e-05 15_[+1]_97 chr3R:9592531-9592651 5.1e-05 72_[+1]_40 chrX:13635103-13635223 5.1e-05 63_[+1]_49 chr2L:4389606-4389726 5.1e-05 111_[+1]_1 chr3R:23940963-23941083 5.1e-05 79_[+1]_33 chr2L:11737824-11737944 5.1e-05 46_[+1]_66 chr3R:11128587-11128707 5.1e-05 99_[+1]_13 chr2R:22079505-22079625 5.1e-05 81_[+1]_31 chr3R:21007148-21007268 5.1e-05 36_[+1]_76 chr2R:21605474-21605594 5.1e-05 70_[+1]_42 chr3R:4449406-4449526 5.1e-05 42_[+1]_70 chr2R:7770750-7770870 5.1e-05 66_[+1]_46 chr2L:17471663-17471783 5.1e-05 51_[+1]_61 chr2R:11430611-11430731 5.1e-05 64_[+1]_48 chrX:16922323-16922443 5.1e-05 30_[+1]_82 chr2R:23616379-23616499 5.1e-05 41_[+1]_71 chr3R:27294257-27294377 5.1e-05 53_[+1]_59 chr2L:1669419-1669539 6.3e-05 41_[+1]_71 chr2R:21721076-21721196 6.3e-05 68_[+1]_44 chr2R:23429135-23429255 6.3e-05 96_[+1]_16 chr3R:18783341-18783461 6.3e-05 65_[+1]_47 chr3R:31386059-31386179 6.3e-05 107_[+1]_5 chr3R:8520941-8521061 6.3e-05 40_[+1]_72 chr2L:2010511-2010631 6.3e-05 16_[+1]_96 chr2R:21118319-21118439 6.3e-05 61_[+1]_51 chr3L:16855392-16855512 6.3e-05 72_[+1]_40 chrX:12801036-12801156 6.3e-05 42_[+1]_70 chr3R:8112097-8112217 9.2e-05 95_[+1]_17 chrX:757050-757170 9.2e-05 66_[+1]_46 chr3R:20891871-20891991 9.2e-05 24_[+1]_88 chr3R:29158770-29158890 9.2e-05 42_[+1]_70 chr3L:9775843-9775963 9.2e-05 33_[+1]_79 chr3L:18993005-18993125 9.2e-05 100_[+1]_12 chr2R:8705402-8705522 9.2e-05 17_[+1]_95 chr3L:17742688-17742808 9.2e-05 80_[+1]_32 chrX:2654098-2654218 9.2e-05 86_[+1]_26 chr3R:9049230-9049350 9.2e-05 44_[+1]_68 chr3L:10867060-10867180 9.2e-05 59_[+1]_53 chr2L:21296490-21296610 9.2e-05 79_[+1]_33 chr3R:9878753-9878873 9.2e-05 88_[+1]_24 chr2L:20879127-20879247 9.2e-05 19_[+1]_93 chrX:4942080-4942200 9.2e-05 33_[+1]_79 chr2R:10277492-10277612 9.2e-05 91_[+1]_21 chr3L:18922207-18922327 9.2e-05 19_[+1]_93 chr3L:5818967-5819087 9.2e-05 5_[+1]_107 chr2R:17712719-17712839 9.2e-05 38_[+1]_74 chr3R:8809921-8810041 9.2e-05 63_[+1]_49 chr3R:10393090-10393210 9.2e-05 13_[+1]_99 chr3L:2394432-2394552 9.2e-05 5_[+1]_107 chr2L:10851600-10851720 9.2e-05 13_[+1]_99 chr2L:20879952-20880072 9.2e-05 76_[+1]_36 chr3R:24563178-24563298 9.2e-05 58_[+1]_54 chr2R:14352698-14352818 9.2e-05 88_[+1]_24 chr3L:20196467-20196587 9.2e-05 70_[+1]_42 chr3L:18810588-18810708 9.2e-05 32_[+1]_80 chr3R:5623777-5623897 9.2e-05 30_[+1]_82 chr3R:10384613-10384733 9.2e-05 96_[+1]_16 chr2L:8104861-8104981 0.00011 47_[+1]_65 chr2L:16789991-16790111 0.00011 54_[+1]_58 chr3R:11154912-11155032 0.00011 81_[+1]_31 chr3R:25967099-25967219 0.00011 23_[+1]_89 chr3R:23589995-23590115 0.00011 49_[+1]_63 chr3R:21169659-21169779 0.00011 61_[+1]_51 chrX:6738117-6738237 0.00011 30_[+1]_82 chrX:3379465-3379585 0.00012 48_[+1]_64 chrX:13633690-13633810 0.00012 78_[+1]_34 chr2L:141005-141125 0.00012 45_[+1]_67 chr3L:21417061-21417181 0.00012 92_[+1]_20 chr3L:16652302-16652422 0.00012 64_[+1]_48 chr3R:21022908-21023028 0.00012 30_[+1]_82 chr2R:11384454-11384574 0.00015 28_[+1]_84 chr2L:13434915-13435035 0.00015 23_[+1]_89 chr3R:5841464-5841584 0.00018 74_[+1]_38 chr3L:11050689-11050809 0.00018 66_[+1]_46 chr3R:11570116-11570236 0.00018 55_[+1]_57 chrX:1229652-1229772 0.0002 82_[+1]_30 chr3R:31461425-31461545 0.0002 72_[+1]_40 chr3R:18621433-18621553 0.0002 66_[+1]_46 chr3R:7506730-7506850 0.0002 57_[+1]_55 chrX:18248429-18248549 0.0002 35_[+1]_77 chr2R:21075550-21075670 0.00023 84_[+1]_28 chr2L:7023740-7023860 0.00023 73_[+1]_39 chr3L:2876848-2876968 0.00023 60_[+1]_52 chr3R:10392070-10392190 0.00023 81_[+1]_31 chr3R:8528856-8528976 0.00023 101_[+1]_11 chr3L:22870537-22870657 0.00023 67_[+1]_45 chr2R:11773289-11773409 0.00023 62_[+1]_50 chr3R:9494749-9494869 0.00023 67_[+1]_45 chr3L:11543303-11543423 0.00029 96_[+1]_16 chr3L:5594278-5594398 0.00029 102_[+1]_10 chr3L:21839869-21839989 0.00029 50_[+1]_62 chrX:3444048-3444168 0.00033 49_[+1]_63 chr2L:6169215-6169335 0.00033 47_[+1]_65 chr3L:17615711-17615831 0.00033 8_[+1]_104 chrX:15520995-15521115 0.00033 45_[+1]_67 chr3L:12039156-12039276 0.00033 4_[+1]_108 chr3L:12004311-12004431 0.00033 65_[+1]_47 chr2R:23612819-23612939 0.00033 28_[+1]_84 chr3R:30425741-30425861 0.00033 73_[+1]_39 chr2R:7373240-7373360 0.00033 57_[+1]_55 chr2R:9149523-9149643 0.00033 87_[+1]_25 chr2L:13292237-13292357 0.00033 80_[+1]_32 chr3L:5595349-5595469 0.00033 68_[+1]_44 chr3R:19625948-19626068 0.00033 85_[+1]_27 chr3R:10390044-10390164 0.00033 55_[+1]_57 chr3L:7390840-7390960 0.00035 60_[+1]_52 chr3R:22536274-22536394 0.00039 22_[+1]_90 chr3R:16870850-16870970 0.00039 42_[+1]_70 chr2R:7988747-7988867 0.00039 59_[+1]_53 chr2R:19415700-19415820 0.00039 97_[+1]_15 chr2L:21062702-21062822 0.00046 69_[+1]_43 chr3R:24275602-24275722 0.00046 3_[+1]_109 chr3L:1739005-1739125 0.0005 64_[+1]_48 chrX:13636677-13636797 0.0005 3_[+1]_109 chr3R:27293247-27293367 0.0005 99_[+1]_13 chr3R:22684972-22685092 0.0005 59_[+1]_53 chr3R:26128472-26128592 0.00052 71_[+1]_41 chr3R:19051284-19051404 0.00057 7_[+1]_105 chrX:11464161-11464281 0.00062 40_[+1]_72 chr3R:16353417-16353537 0.00065 56_[+1]_56 chrX:3440697-3440817 0.00075 9_[+1]_103 chr3R:26213080-26213200 0.00075 48_[+1]_64 chr2R:11786227-11786347 0.00075 42_[+1]_70 chr2L:13804678-13804798 0.00075 45_[+1]_67 chrX:7067524-7067644 0.00075 86_[+1]_26 chr3R:22046836-22046956 0.00075 33_[+1]_79 chr3L:20524555-20524675 0.00075 42_[+1]_70 chr2L:8956548-8956668 0.00075 62_[+1]_50 chr2R:16134434-16134554 0.00075 57_[+1]_55 chr2L:10529111-10529231 0.0008 46_[+1]_66 chr3R:14445206-14445326 0.0008 21_[+1]_91 chrX:1397956-1398076 0.0008 78_[+1]_34 chrX:21065533-21065653 0.0008 103_[+1]_9 chr2L:3055746-3055866 0.00082 59_[+1]_53 chr3L:5657396-5657516 0.00092 77_[+1]_35 chr2R:14232409-14232529 0.00092 59_[+1]_53 chr3L:16979652-16979772 0.00092 42_[+1]_70 chr2L:4893714-4893834 0.00092 17_[+1]_95 chr3L:16798877-16798997 0.00092 48_[+1]_64 chr3R:18432999-18433119 0.00092 108_[+1]_4 chr3L:17958369-17958489 0.00099 104_[+1]_8 chr3L:19902031-19902151 0.00099 84_[+1]_28 chr3R:20961083-20961203 0.0012 19_[+1]_93 chr3R:27007155-27007275 0.0013 41_[+1]_71 chr2R:16131969-16132089 0.0015 101_[+1]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DCACGTGH width=8 seqs=218 chr3L:9776909-9777029 ( 10) TCACGTGC 1 chrX:8490450-8490570 ( 8) GCACGTGC 1 chr3R:30431451-30431571 ( 77) GCACGTGC 1 chr2L:7027661-7027781 ( 81) GCACGTGC 1 chr2R:25024139-25024259 ( 71) TCACGTGC 1 chr3R:26227005-26227125 ( 58) TCACGTGC 1 chr3L:12803464-12803584 ( 47) GCACGTGC 1 chr2R:6643992-6644112 ( 11) GCACGTGC 1 chr3R:17707163-17707283 ( 65) TCACGTGC 1 chr3L:6723580-6723700 ( 61) TCACGTGC 1 chr2L:21623090-21623210 ( 33) TCACGTGC 1 chr2R:18717357-18717477 ( 32) TCACGTGC 1 chr3L:2530157-2530277 ( 56) TCACGTGC 1 chr3L:14548525-14548645 ( 91) TCACGTGC 1 chr2L:8098483-8098603 ( 69) TCACGTGC 1 chr3L:18952688-18952808 ( 90) TCACGTGC 1 chr3R:28846041-28846161 ( 30) TCACGTGC 1 chr3R:16014742-16014862 ( 74) GCACGTGC 1 chr2L:5156542-5156662 ( 24) TCACGTGC 1 chr2L:19809794-19809914 ( 24) TCACGTGC 1 chr3R:27137062-27137182 ( 81) TCACGTGC 1 chr3L:10658469-10658589 ( 45) GCACGTGC 1 chr2L:12487972-12488092 ( 17) TCACGTGC 1 chr2R:18695647-18695767 ( 48) TCACGTGC 1 chr3R:8108946-8109066 ( 60) GCACGTGC 1 chr3R:9891149-9891269 ( 38) TCACGTGC 1 chr2L:10199127-10199247 ( 101) GCACGTGC 1 chr2R:14448943-14449063 ( 79) GCACGTGC 1 chrX:3411619-3411739 ( 89) GCACGTGC 1 chrX:18642598-18642718 ( 101) TCACGTGC 1 chr2R:12565709-12565829 ( 7) GCACGTGC 1 chr3L:15539177-15539297 ( 67) TCACGTGC 1 chr2R:16882442-16882562 ( 59) TCACGTGC 1 chr3R:29082151-29082271 ( 96) TCACGTGC 1 chrX:2651858-2651978 ( 13) TCACGTGC 1 chr3R:6419212-6419332 ( 30) TCACGTGC 1 chr3R:31322456-31322576 ( 36) GCACGTGC 1 chr3R:19620142-19620262 ( 65) GCACGTGC 1 chr3R:5279727-5279847 ( 53) GCACGTGC 1 chr3R:21072201-21072321 ( 71) TCACGTGC 1 chr2R:23420634-23420754 ( 61) GCACGTGC 1 chr2L:5149766-5149886 ( 95) TCACGTGC 1 chr3L:6723374-6723494 ( 1) TCACGTGC 1 chr2R:14246735-14246855 ( 42) TCACGTGC 1 chr2R:10020394-10020514 ( 56) TCACGTGC 1 chr2L:6371391-6371511 ( 73) TCACGTGC 1 chr3R:5073905-5074025 ( 36) TCACGTGC 1 chr3R:19793800-19793920 ( 44) GCACGTGC 1 chr3R:17147786-17147906 ( 68) GCACGTGC 1 chr2R:22426930-22427050 ( 69) TCACGTGC 1 chr2L:11056930-11057050 ( 34) TCACGTGC 1 chr3R:17713751-17713871 ( 66) TCACGTGC 1 chr3R:16981415-16981535 ( 71) TCACGTGC 1 chr2L:19899045-19899165 ( 58) GCACGTGC 1 chr3L:22474451-22474571 ( 73) GCACGTGC 1 chr3L:3253796-3253916 ( 63) GCACGTGA 1 chr3R:25238933-25239053 ( 91) TCACGTGA 1 chr2L:4889338-4889458 ( 78) TCACGTGA 1 chr2R:16669719-16669839 ( 72) TCACGTGA 1 chr2R:15863584-15863704 ( 50) GCACGTGA 1 chr3L:19139258-19139378 ( 62) GCACGTGA 1 chr2R:19287103-19287223 ( 14) TCACGTGA 1 chr2R:12479554-12479674 ( 79) GCACGTGA 1 chr2R:16667962-16668082 ( 77) TCACGTGA 1 chr3L:1098556-1098676 ( 43) GCACGTGA 1 chr2R:9561425-9561545 ( 41) GCACGTGA 1 chr3R:24285766-24285886 ( 83) TCACGTGA 1 chrX:11922756-11922876 ( 40) GCACGTGA 1 chr2L:18515266-18515386 ( 75) GCACGTGA 1 chr2R:9390306-9390426 ( 104) GCACGTGA 1 chr3R:11244629-11244749 ( 90) GCACGTGA 1 chr3L:136681-136801 ( 37) TCACGTGA 1 chr2R:9189895-9190015 ( 57) TCACGTGA 1 chr2L:12620468-12620588 ( 16) GCACGTGA 1 chr3R:9592531-9592651 ( 73) TCACGTGA 1 chrX:13635103-13635223 ( 64) TCACGTGA 1 chr2L:4389606-4389726 ( 112) TCACGTGA 1 chr3R:23940963-23941083 ( 80) TCACGTGA 1 chr2L:11737824-11737944 ( 47) GCACGTGA 1 chr3R:11128587-11128707 ( 100) GCACGTGA 1 chr2R:22079505-22079625 ( 82) GCACGTGA 1 chr3R:21007148-21007268 ( 37) GCACGTGA 1 chr2R:21605474-21605594 ( 71) GCACGTGA 1 chr3R:4449406-4449526 ( 43) TCACGTGA 1 chr2R:7770750-7770870 ( 67) GCACGTGA 1 chr2L:17471663-17471783 ( 52) GCACGTGA 1 chr2R:11430611-11430731 ( 65) GCACGTGA 1 chrX:16922323-16922443 ( 31) GCACGTGA 1 chr2R:23616379-23616499 ( 42) GCACGTGA 1 chr3R:27294257-27294377 ( 54) GCACGTGA 1 chr2L:1669419-1669539 ( 42) ACACGTGC 1 chr2R:21721076-21721196 ( 69) ACACGTGC 1 chr2R:23429135-23429255 ( 97) ACACGTGC 1 chr3R:18783341-18783461 ( 66) ACACGTGC 1 chr3R:31386059-31386179 ( 108) ACACGTGC 1 chr3R:8520941-8521061 ( 41) ACACGTGC 1 chr2L:2010511-2010631 ( 17) ACACGTGC 1 chr2R:21118319-21118439 ( 62) ACACGTGC 1 chr3L:16855392-16855512 ( 73) ACACGTGC 1 chrX:12801036-12801156 ( 43) ACACGTGC 1 chr3R:8112097-8112217 ( 96) GCACGTGT 1 chrX:757050-757170 ( 67) GCACGTGT 1 chr3R:20891871-20891991 ( 25) GCACGTGT 1 chr3R:29158770-29158890 ( 43) GCACGTGT 1 chr3L:9775843-9775963 ( 34) GCACGTGT 1 chr3L:18993005-18993125 ( 101) TCACGTGT 1 chr2R:8705402-8705522 ( 18) TCACGTGT 1 chr3L:17742688-17742808 ( 81) TCACGTGT 1 chrX:2654098-2654218 ( 87) GCACGTGT 1 chr3R:9049230-9049350 ( 45) GCACGTGT 1 chr3L:10867060-10867180 ( 60) GCACGTGT 1 chr2L:21296490-21296610 ( 80) GCACGTGT 1 chr3R:9878753-9878873 ( 89) TCACGTGT 1 chr2L:20879127-20879247 ( 20) GCACGTGT 1 chrX:4942080-4942200 ( 34) TCACGTGT 1 chr2R:10277492-10277612 ( 92) TCACGTGT 1 chr3L:18922207-18922327 ( 20) TCACGTGT 1 chr3L:5818967-5819087 ( 6) TCACGTGT 1 chr2R:17712719-17712839 ( 39) TCACGTGT 1 chr3R:8809921-8810041 ( 64) TCACGTGT 1 chr3R:10393090-10393210 ( 14) GCACGTGT 1 chr3L:2394432-2394552 ( 6) GCACGTGT 1 chr2L:10851600-10851720 ( 14) GCACGTGT 1 chr2L:20879952-20880072 ( 77) TCACGTGT 1 chr3R:24563178-24563298 ( 59) TCACGTGT 1 chr2R:14352698-14352818 ( 89) TCACGTGT 1 chr3L:20196467-20196587 ( 71) GCACGTGT 1 chr3L:18810588-18810708 ( 33) TCACGTGT 1 chr3R:5623777-5623897 ( 31) TCACGTGT 1 chr3R:10384613-10384733 ( 97) GCACGTGT 1 chr2L:8104861-8104981 ( 48) ACACGTGA 1 chr2L:16789991-16790111 ( 55) ACACGTGA 1 chr3R:11154912-11155032 ( 82) ACACGTGA 1 chr3R:25967099-25967219 ( 24) ACACGTGA 1 chr3R:23589995-23590115 ( 50) ACACGTGA 1 chr3R:21169659-21169779 ( 62) ACACGTGA 1 chrX:6738117-6738237 ( 31) ACACGTGA 1 chrX:3379465-3379585 ( 49) ACACGTGT 1 chrX:13633690-13633810 ( 79) ACACGTGT 1 chr2L:141005-141125 ( 46) ACACGTGT 1 chr3L:21417061-21417181 ( 93) ACACGTGT 1 chr3L:16652302-16652422 ( 65) ACACGTGT 1 chr3R:21022908-21023028 ( 31) ACACGTGT 1 chr2R:11384454-11384574 ( 29) TAACGTGC 1 chr2L:13434915-13435035 ( 24) GAACGTGC 1 chr3R:5841464-5841584 ( 75) GAACGTGA 1 chr3L:11050689-11050809 ( 67) GAACGTGA 1 chr3R:11570116-11570236 ( 56) TAACGTGA 1 chrX:1229652-1229772 ( 83) TCGCGTGC 1 chr3R:31461425-31461545 ( 73) GCGCGTGC 1 chr3R:18621433-18621553 ( 67) TCGCGTGC 1 chr3R:7506730-7506850 ( 58) TCGCGTGC 1 chrX:18248429-18248549 ( 36) TCGCGTGC 1 chr2R:21075550-21075670 ( 85) AAACGTGC 1 chr2L:7023740-7023860 ( 74) GCACGCGC 1 chr3L:2876848-2876968 ( 61) AAACGTGC 1 chr3R:10392070-10392190 ( 82) AAACGTGC 1 chr3R:8528856-8528976 ( 102) AAACGTGC 1 chr3L:22870537-22870657 ( 68) AAACGTGC 1 chr2R:11773289-11773409 ( 63) AAACGTGC 1 chr3R:9494749-9494869 ( 68) AAACGTGC 1 chr3L:11543303-11543423 ( 97) TCGCGTGA 1 chr3L:5594278-5594398 ( 103) TCGCGTGA 1 chr3L:21839869-21839989 ( 51) TCGCGTGA 1 chrX:3444048-3444168 ( 50) GCACGCGA 1 chr2L:6169215-6169335 ( 48) GCACGCGA 1 chr3L:17615711-17615831 ( 9) AAACGTGA 1 chrX:15520995-15521115 ( 46) TCACGCGA 1 chr3L:12039156-12039276 ( 5) AAACGTGA 1 chr3L:12004311-12004431 ( 66) TCACGCGA 1 chr2R:23612819-23612939 ( 29) GCACGCGA 1 chr3R:30425741-30425861 ( 74) AAACGTGA 1 chr2R:7373240-7373360 ( 58) AAACGTGA 1 chr2R:9149523-9149643 ( 88) AAACGTGA 1 chr2L:13292237-13292357 ( 81) AAACGTGA 1 chr3L:5595349-5595469 ( 69) AAACGTGA 1 chr3R:19625948-19626068 ( 86) AAACGTGA 1 chr3R:10390044-10390164 ( 56) AAACGTGA 1 chr3L:7390840-7390960 ( 61) ACGCGTGC 1 chr3R:22536274-22536394 ( 23) ACACGCGC 1 chr3R:16870850-16870970 ( 43) TCGCGTGT 1 chr2R:7988747-7988867 ( 60) TCGCGTGT 1 chr2R:19415700-19415820 ( 98) TCGCGTGT 1 chr2L:21062702-21062822 ( 70) TCACGCGT 1 chr3R:24275602-24275722 ( 4) AAACGTGT 1 chr3L:1739005-1739125 ( 65) CCACGTGA 1 chrX:13636677-13636797 ( 4) CCACGTGA 1 chr3R:27293247-27293367 ( 100) GCACGAGC 1 chr3R:22684972-22685092 ( 60) CCACGTGA 1 chr3R:26128472-26128592 ( 72) ACACGCGA 1 chr3R:19051284-19051404 ( 8) TCCCGTGC 1 chrX:11464161-11464281 ( 41) GCACGAGA 1 chr3R:16353417-16353537 ( 57) ACACGCGT 1 chrX:3440697-3440817 ( 10) ACACGAGC 1 chr3R:26213080-26213200 ( 49) GCACGTTT 1 chr2R:11786227-11786347 ( 43) GCCCGTGA 1 chr2L:13804678-13804798 ( 46) ACACGAGC 1 chrX:7067524-7067644 ( 87) TCACGTTT 1 chr3R:22046836-22046956 ( 34) GCACGTTT 1 chr3L:20524555-20524675 ( 43) GCACGTTT 1 chr2L:8956548-8956668 ( 63) TCACGTTT 1 chr2R:16134434-16134554 ( 58) TCACGTTT 1 chr2L:10529111-10529231 ( 47) TCTCGTGC 1 chr3R:14445206-14445326 ( 22) TCTCGTGC 1 chrX:1397956-1398076 ( 79) TCTCGTGC 1 chrX:21065533-21065653 ( 104) TCACGAGT 1 chr2L:3055746-3055866 ( 60) ACCCGTGC 1 chr3L:5657396-5657516 ( 78) TCACGTGG 1 chr2R:14232409-14232529 ( 60) GCATGTGA 1 chr3L:16979652-16979772 ( 43) GCATGTGA 1 chr2L:4893714-4893834 ( 18) ACACGAGA 1 chr3L:16798877-16798997 ( 49) TCCCGTGT 1 chr3R:18432999-18433119 ( 109) TCATGTGA 1 chr3L:17958369-17958489 ( 105) ACACGTTT 1 chr3L:19902031-19902151 ( 85) ACACGTTT 1 chr3R:20961083-20961203 ( 20) GAACGCGA 1 chr3R:27007155-27007275 ( 42) ACATGTGT 1 chr2R:16131969-16132089 ( 102) AAGCGTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.58866 E= 2.2e-215 -15 -405 55 57 -127 197 -1441 -1441 177 -363 -196 -432 -1441 211 -1441 -390 -1441 -1441 211 -1441 -327 -217 -1441 175 -1441 -1441 205 -291 35 86 -566 -18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 218 E= 2.2e-215 0.238532 0.013761 0.339450 0.408257 0.110092 0.889908 0.000000 0.000000 0.908257 0.018349 0.059633 0.013761 0.000000 0.981651 0.000000 0.018349 0.000000 0.000000 1.000000 0.000000 0.027523 0.050459 0.000000 0.922018 0.000000 0.000000 0.963303 0.036697 0.339450 0.412844 0.004587 0.243119 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DCACGTGH MEME-1 regular expression -------------------------------------------------------------------------------- [TGA]CACGTG[CAT] -------------------------------------------------------------------------------- Time 7.18 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAAACAA MEME-2 width = 8 sites = 20 llr = 193 E-value = 3.2e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 78aaa:aa pos.-specific C 3::::a:: probability G :::::::: matrix T :3:::::: bits 2.1 * 1.9 ****** 1.7 ****** 1.5 ****** Relative 1.3 ****** Entropy 1.1 ******** (13.9 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAAACAA consensus CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:1669419-1669539 1 2.09e-05 . AAAAACAA ACCACAACAG chr2R:11667844-11667964 72 2.09e-05 AAAAGTAAAT AAAAACAA CTATGCATGA chrX:13636677-13636797 17 2.09e-05 CGTGATGCCA AAAAACAA GCACTTGCCA chr2L:5156542-5156662 62 2.09e-05 AATGCCAGAA AAAAACAA ATAAGTTCTT chr3L:11125775-11125895 7 2.09e-05 CCCAAT AAAAACAA CACAGCTTCA chr3R:8108946-8109066 32 2.09e-05 CTTTAACATT AAAAACAA ACAGTTTTGT chr2R:7373240-7373360 49 2.09e-05 GCAGCCCCAA AAAAACAA AAAACGTGAC chr3R:21169659-21169779 4 2.09e-05 gaa aaaaacaa acaagaaaaC chr3R:10387087-10387207 72 2.09e-05 GCTCTGTAAT AAAAACAA AATGTCGGCC chr3R:8353505-8353625 83 3.89e-05 TGTCATAGTG CAAAACAA ATGGACAGCT chr2R:23429135-23429255 52 3.89e-05 CCCCCAGCAA CAAAACAA AGAGAAAACG chr3R:18621433-18621553 17 3.89e-05 GCTCTTTTTC CAAAACAA CTTCACTCTT chr3R:27137062-27137182 10 3.89e-05 CAAGACGCT CAAAACAA GTTGATTAAA chr2L:17471663-17471783 42 3.89e-05 TAAAGGTATA CAAAACAA CAGCACGTGA chr3R:10390044-10390164 28 3.89e-05 AGGcaaaaca caaaacaa aatccaacgc chr3L:12803464-12803584 112 6.06e-05 ACAATAGAAA ATAAACAA A chr2L:11737824-11737944 104 6.06e-05 AACGCGCCTG ATAAACAA AGCACTTGA chr3L:18810588-18810708 59 6.06e-05 TAACAAGTGT ATAAACAA ATAGAGCGAT chrX:6738117-6738237 17 6.06e-05 CAGCCAAAAT ATAAACAA TACGCAACAC chr3R:10381118-10381238 28 6.06e-05 TCGACTTTTT ATAAACAA TTCTCGAGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:1669419-1669539 2.1e-05 [+2]_112 chr2R:11667844-11667964 2.1e-05 71_[+2]_41 chrX:13636677-13636797 2.1e-05 16_[+2]_96 chr2L:5156542-5156662 2.1e-05 61_[+2]_51 chr3L:11125775-11125895 2.1e-05 6_[+2]_106 chr3R:8108946-8109066 2.1e-05 31_[+2]_81 chr2R:7373240-7373360 2.1e-05 48_[+2]_64 chr3R:21169659-21169779 2.1e-05 3_[+2]_109 chr3R:10387087-10387207 2.1e-05 71_[+2]_41 chr3R:8353505-8353625 3.9e-05 82_[+2]_30 chr2R:23429135-23429255 3.9e-05 51_[+2]_61 chr3R:18621433-18621553 3.9e-05 16_[+2]_96 chr3R:27137062-27137182 3.9e-05 9_[+2]_103 chr2L:17471663-17471783 3.9e-05 41_[+2]_71 chr3R:10390044-10390164 3.9e-05 27_[+2]_85 chr3L:12803464-12803584 6.1e-05 111_[+2]_1 chr2L:11737824-11737944 6.1e-05 103_[+2]_9 chr3L:18810588-18810708 6.1e-05 58_[+2]_54 chrX:6738117-6738237 6.1e-05 16_[+2]_96 chr3R:10381118-10381238 6.1e-05 27_[+2]_85 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAACAA width=8 seqs=20 chr2L:1669419-1669539 ( 1) AAAAACAA 1 chr2R:11667844-11667964 ( 72) AAAAACAA 1 chrX:13636677-13636797 ( 17) AAAAACAA 1 chr2L:5156542-5156662 ( 62) AAAAACAA 1 chr3L:11125775-11125895 ( 7) AAAAACAA 1 chr3R:8108946-8109066 ( 32) AAAAACAA 1 chr2R:7373240-7373360 ( 49) AAAAACAA 1 chr3R:21169659-21169779 ( 4) AAAAACAA 1 chr3R:10387087-10387207 ( 72) AAAAACAA 1 chr3R:8353505-8353625 ( 83) CAAAACAA 1 chr2R:23429135-23429255 ( 52) CAAAACAA 1 chr3R:18621433-18621553 ( 17) CAAAACAA 1 chr3R:27137062-27137182 ( 10) CAAAACAA 1 chr2L:17471663-17471783 ( 42) CAAAACAA 1 chr3R:10390044-10390164 ( 28) CAAAACAA 1 chr3L:12803464-12803584 ( 112) ATAAACAA 1 chr2L:11737824-11737944 ( 104) ATAAACAA 1 chr3L:18810588-18810708 ( 59) ATAAACAA 1 chrX:6738117-6738237 ( 17) ATAAACAA 1 chr3R:10381118-10381238 ( 28) ATAAACAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.7147 E= 3.2e+000 140 40 -1097 -1097 150 -1097 -1097 -14 191 -1097 -1097 -1097 191 -1097 -1097 -1097 191 -1097 -1097 -1097 -1097 213 -1097 -1097 191 -1097 -1097 -1097 191 -1097 -1097 -1097 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 20 E= 3.2e+000 0.700000 0.300000 0.000000 0.000000 0.750000 0.000000 0.000000 0.250000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAACAA MEME-2 regular expression -------------------------------------------------------------------------------- [AC][AT]AAACAA -------------------------------------------------------------------------------- Time 13.05 secs. ******************************************************************************** ******************************************************************************** MOTIF TTATCAGC MEME-3 width = 8 sites = 12 llr = 124 E-value = 2.1e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a::a:3 pos.-specific C ::::a::8 probability G ::::::a: matrix T aa:a:::: bits 2.1 * * 1.9 ******* 1.7 ******* 1.5 ******* Relative 1.3 ******** Entropy 1.1 ******** (14.9 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTATCAGC consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:6169215-6169335 62 1.76e-05 GCGACTTGGC TTATCAGC CAGCGACAAT chr3L:2530157-2530277 17 1.76e-05 CGAGGATCTG TTATCAGC CAAGGGGGAC chrX:7067524-7067644 109 1.76e-05 TCTTACTGTT TTATCAGC CGTC chr3L:16157089-16157209 47 1.76e-05 TCTACGGGCA TTATCAGC AGACATATAG chr3L:20524555-20524675 32 1.76e-05 ATAGTATTCC TTATCAGC ATAGCACGTT chr3L:21417061-21417181 64 1.76e-05 CATTGGTCAT TTATCAGC ATTTTTTTTC chr2R:9149523-9149643 112 1.76e-05 CTTGACGGGC TTATCAGC C chr3L:21839869-21839989 10 1.76e-05 AGTATTCAT TTATCAGC AACCTTGGCA chr3R:24275602-24275722 42 1.76e-05 TAGTCGCCTC TTATCAGC CCCAAAAACA chr3R:31461425-31461545 3 3.81e-05 GC TTATCAGA TGACGATGCA chr3R:18783341-18783461 2 3.81e-05 A TTATCAGA CCAGTACTTC chr3L:136681-136801 109 3.81e-05 ACACGGGCTG TTATCAGA GTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:6169215-6169335 1.8e-05 61_[+3]_51 chr3L:2530157-2530277 1.8e-05 16_[+3]_96 chrX:7067524-7067644 1.8e-05 108_[+3]_4 chr3L:16157089-16157209 1.8e-05 46_[+3]_66 chr3L:20524555-20524675 1.8e-05 31_[+3]_81 chr3L:21417061-21417181 1.8e-05 63_[+3]_49 chr2R:9149523-9149643 1.8e-05 111_[+3]_1 chr3L:21839869-21839989 1.8e-05 9_[+3]_103 chr3R:24275602-24275722 1.8e-05 41_[+3]_71 chr3R:31461425-31461545 3.8e-05 2_[+3]_110 chr3R:18783341-18783461 3.8e-05 1_[+3]_111 chr3L:136681-136801 3.8e-05 108_[+3]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTATCAGC width=8 seqs=12 chr2L:6169215-6169335 ( 62) TTATCAGC 1 chr3L:2530157-2530277 ( 17) TTATCAGC 1 chrX:7067524-7067644 ( 109) TTATCAGC 1 chr3L:16157089-16157209 ( 47) TTATCAGC 1 chr3L:20524555-20524675 ( 32) TTATCAGC 1 chr3L:21417061-21417181 ( 64) TTATCAGC 1 chr2R:9149523-9149643 ( 112) TTATCAGC 1 chr3L:21839869-21839989 ( 10) TTATCAGC 1 chr3R:24275602-24275722 ( 42) TTATCAGC 1 chr3R:31461425-31461545 ( 3) TTATCAGA 1 chr3R:18783341-18783461 ( 2) TTATCAGA 1 chr3L:136681-136801 ( 109) TTATCAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.648 E= 2.1e+003 -1023 -1023 -1023 186 -1023 -1023 -1023 186 191 -1023 -1023 -1023 -1023 -1023 -1023 186 -1023 213 -1023 -1023 191 -1023 -1023 -1023 -1023 -1023 211 -1023 -9 172 -1023 -1023 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 2.1e+003 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.750000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTATCAGC MEME-3 regular expression -------------------------------------------------------------------------------- TTATCAG[CA] -------------------------------------------------------------------------------- Time 18.88 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTRTTTT MEME-4 width = 8 sites = 56 llr = 432 E-value = 3.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::3:::: pos.-specific C ::2::::: probability G ::25:1:2 matrix T aa62a9a8 bits 2.1 1.9 ** * 1.7 ** * * 1.5 ** *** Relative 1.3 ** **** Entropy 1.1 ** **** (11.1 bits) 0.9 ** **** 0.6 *** **** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTGTTTT consensus CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:21062702-21062822 2 2.76e-05 T TTTGTTTT CTCGTCTCAT chr3R:8112097-8112217 29 2.76e-05 ATCAAGTATT TTTGTTTT GCTTTTTTTA chr3L:6723580-6723700 38 2.76e-05 gttttttctg tttgtttt tcagtttatt chrX:11464161-11464281 19 2.76e-05 CCGGCCCCCG TTTGTTTT ACATGTGTCA chr3R:28846041-28846161 44 2.76e-05 GTGCGCGGCC TTTGTTTT TATTGCTGCC chr3R:8108946-8109066 45 2.76e-05 AACAAACAGT TTTGTTTT TGCTTTGGCA chrX:13635103-13635223 48 2.76e-05 TTGCTGGCTT TTTGTTTT GGCCCAAGTC chrX:16922323-16922443 4 2.76e-05 ttt tttgtttt tAGCCCACTC chr3R:10185427-10185547 31 5.91e-05 GGATTTGCGG TTTATTTT GATACCCTCG chr3L:16769067-16769187 45 5.91e-05 ATGTTTCTTC TTTATTTT TTCTAAGTGT chr2R:19415700-19415820 30 5.91e-05 GCCAATTTAG TTTATTTT TTACTAGTTC chr2R:22426930-22427050 85 5.91e-05 GCGGTTGAGC TTTATTTT ATCAAGCTTT chr3R:10395556-10395676 112 5.91e-05 TTCGCTCTAC TTTATTTT G chr3R:24275602-24275722 22 5.91e-05 TTCCGCTGTG TTTATTTT CGTAGTCGCC chr3L:17742688-17742808 68 8.20e-05 AGATTAGATA TTCGTTTT ACATCTCACG chr3R:27137062-27137182 90 8.20e-05 ATCACGTGCC TTCGTTTT CGAGGAATAC chrX:18642598-18642718 91 8.20e-05 TCCTCCCAGT TTCGTTTT AATCACGTGC chr2L:13292237-13292357 41 8.20e-05 TTAAAAACAT TTCGTTTT CTGCGCGCCG chr3R:10387087-10387207 6 8.20e-05 ATTAT TTCGTTTT TTAAAGTGAA chr3R:30431451-30431571 39 1.38e-04 TGGCTACAGT TTTTTTTT TGCCGAATAT chr2L:2801519-2801639 66 1.38e-04 CAGCGAATGT TTGGTTTT TTCCTATGTT chrX:7067524-7067644 67 1.38e-04 AAGAGGTGTT TTTTTTTT CGGCAGACAA chr3R:22684972-22685092 6 1.38e-04 TTTTG TTGGTTTT TATATTTTTA chr3L:21417061-21417181 106 1.38e-04 CGTGTGTTCG TTTTTTTT TGTTGTT chr2R:6112863-6112983 102 1.38e-04 gaattattat tttttttT TGTTGCCAGC chr3R:23940963-23941083 56 1.38e-04 GTTCAATTCT TTTTTTTT TGGCACAACG chrX:12801036-12801156 96 1.38e-04 GCCGGCTAAT TTGGTTTT GCATGGCAAA chr3R:10384613-10384733 71 1.38e-04 TATAAGGGAA TTTTTTTT AGTTGTCCAG chr3L:17958369-17958489 70 1.61e-04 GCTTTAGAAC TTTGTTTG CGTACTTTGT chr3L:14548525-14548645 71 1.61e-04 GAGTACTCGG TTTGTTTG AAGGCATGCC chr3R:9878753-9878873 112 1.61e-04 TGTGCGAGTG TTTGTTTG G chr3R:11244629-11244749 71 1.61e-04 GGGAAAAACT TTTGTTTG GGACGCCCGC chr3R:16981415-16981535 51 1.61e-04 CTTTGGGCGC TTTGTTTG GTTGTCGCAG chr3R:25238933-25239053 54 1.87e-04 CACTTTTTGT TTCATTTT TGGCCAGCAA chrX:4942080-4942200 64 1.87e-04 GACTTTGGCT TTCATTTT ATCTGGGCAT chr2R:16882442-16882562 18 1.87e-04 AAAACTTGTT TTCATTTT GCCACCGCTG chr2L:5149766-5149886 28 1.87e-04 AATATGCCAA TTCATTTT ATTGCTCTTG chr3R:9891149-9891269 81 2.14e-04 TTGAATTATG TTGATTTT ATTCATTCCG chr3R:6419212-6419332 88 2.14e-04 TTGTCTGCCC TTGATTTT ATCGATTTTG chrX:6738117-6738237 50 2.14e-04 TCGCGGATCG TTGATTTT CATGTGGCCC chr3R:10390044-10390164 71 2.14e-04 TGATGTTTCG TTGATTTT TTCCCTGTGA chr3L:10482635-10482755 37 2.41e-04 AATTTAAGAC TTCTTTTT AGTGACTTTG chr3R:19051284-19051404 103 2.41e-04 GCGCACATGT TTCTTTTT GGCCAGACCC chr3R:21022908-21023028 89 2.41e-04 TCGCGCACga ttcttttt cgtttctgat chr3L:12803464-12803584 23 2.68e-04 GTTTACGTAT TTTATTTG TATCGCCAAA chrX:2654098-2654218 49 2.68e-04 GTTGCTACTT TTTATTTG CTGATAAGAT chr3R:19625948-19626068 112 2.68e-04 TTTGCTTTAA TTTATTTG T chr3R:18783341-18783461 38 3.15e-04 CAATATGAAA TTGTTTTT CCCCGAAACG chr2R:9189895-9190015 110 3.15e-04 ATAAACGGGT TTCGTTTG GCC chr3L:5595349-5595469 10 3.15e-04 TATGGGTGA TTGTTTTT GTGATTTGAG chrX:3379465-3379585 66 3.62e-04 TAGCAATAAA TTGGTTTG CTCAAGGTCG chrX:11922756-11922876 4 3.85e-04 CTC TTTGTGTT CGCTCACAGC chr2L:13804678-13804798 18 3.85e-04 GAAGCGGGTT TTTGTGTT TTTACGGATC chr3R:9592531-9592651 6 3.85e-04 TATAA TTTGTGTT GGGCATTTCA chr2R:11657266-11657386 57 4.79e-04 TCGTTACTAC TTTGATTT CAGGTCTGCC chrX:15520995-15521115 61 4.79e-04 CGACATCGGC TTtgattt ctgatttccg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:21062702-21062822 2.8e-05 1_[+4]_111 chr3R:8112097-8112217 2.8e-05 28_[+4]_84 chr3L:6723580-6723700 2.8e-05 37_[+4]_75 chrX:11464161-11464281 2.8e-05 18_[+4]_94 chr3R:28846041-28846161 2.8e-05 43_[+4]_69 chr3R:8108946-8109066 2.8e-05 44_[+4]_68 chrX:13635103-13635223 2.8e-05 47_[+4]_65 chrX:16922323-16922443 2.8e-05 3_[+4]_109 chr3R:10185427-10185547 5.9e-05 30_[+4]_82 chr3L:16769067-16769187 5.9e-05 44_[+4]_68 chr2R:19415700-19415820 5.9e-05 29_[+4]_83 chr2R:22426930-22427050 5.9e-05 84_[+4]_28 chr3R:10395556-10395676 5.9e-05 111_[+4]_1 chr3R:24275602-24275722 5.9e-05 21_[+4]_91 chr3L:17742688-17742808 8.2e-05 67_[+4]_45 chr3R:27137062-27137182 8.2e-05 89_[+4]_23 chrX:18642598-18642718 8.2e-05 90_[+4]_22 chr2L:13292237-13292357 8.2e-05 40_[+4]_72 chr3R:10387087-10387207 8.2e-05 5_[+4]_107 chr3R:30431451-30431571 0.00014 38_[+4]_74 chr2L:2801519-2801639 0.00014 65_[+4]_47 chrX:7067524-7067644 0.00014 66_[+4]_46 chr3R:22684972-22685092 0.00014 5_[+4]_107 chr3L:21417061-21417181 0.00014 105_[+4]_7 chr2R:6112863-6112983 0.00014 101_[+4]_11 chr3R:23940963-23941083 0.00014 55_[+4]_57 chrX:12801036-12801156 0.00014 95_[+4]_17 chr3R:10384613-10384733 0.00014 70_[+4]_42 chr3L:17958369-17958489 0.00016 69_[+4]_43 chr3L:14548525-14548645 0.00016 70_[+4]_42 chr3R:9878753-9878873 0.00016 111_[+4]_1 chr3R:11244629-11244749 0.00016 70_[+4]_42 chr3R:16981415-16981535 0.00016 50_[+4]_62 chr3R:25238933-25239053 0.00019 53_[+4]_59 chrX:4942080-4942200 0.00019 63_[+4]_49 chr2R:16882442-16882562 0.00019 17_[+4]_95 chr2L:5149766-5149886 0.00019 27_[+4]_85 chr3R:9891149-9891269 0.00021 80_[+4]_32 chr3R:6419212-6419332 0.00021 87_[+4]_25 chrX:6738117-6738237 0.00021 49_[+4]_63 chr3R:10390044-10390164 0.00021 70_[+4]_42 chr3L:10482635-10482755 0.00024 36_[+4]_76 chr3R:19051284-19051404 0.00024 102_[+4]_10 chr3R:21022908-21023028 0.00024 88_[+4]_24 chr3L:12803464-12803584 0.00027 22_[+4]_90 chrX:2654098-2654218 0.00027 48_[+4]_64 chr3R:19625948-19626068 0.00027 111_[+4]_1 chr3R:18783341-18783461 0.00031 37_[+4]_75 chr2R:9189895-9190015 0.00031 109_[+4]_3 chr3L:5595349-5595469 0.00031 9_[+4]_103 chrX:3379465-3379585 0.00036 65_[+4]_47 chrX:11922756-11922876 0.00039 3_[+4]_109 chr2L:13804678-13804798 0.00039 17_[+4]_95 chr3R:9592531-9592651 0.00039 5_[+4]_107 chr2R:11657266-11657386 0.00048 56_[+4]_56 chrX:15520995-15521115 0.00048 60_[+4]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTRTTTT width=8 seqs=56 chr2L:21062702-21062822 ( 2) TTTGTTTT 1 chr3R:8112097-8112217 ( 29) TTTGTTTT 1 chr3L:6723580-6723700 ( 38) TTTGTTTT 1 chrX:11464161-11464281 ( 19) TTTGTTTT 1 chr3R:28846041-28846161 ( 44) TTTGTTTT 1 chr3R:8108946-8109066 ( 45) TTTGTTTT 1 chrX:13635103-13635223 ( 48) TTTGTTTT 1 chrX:16922323-16922443 ( 4) TTTGTTTT 1 chr3R:10185427-10185547 ( 31) TTTATTTT 1 chr3L:16769067-16769187 ( 45) TTTATTTT 1 chr2R:19415700-19415820 ( 30) TTTATTTT 1 chr2R:22426930-22427050 ( 85) TTTATTTT 1 chr3R:10395556-10395676 ( 112) TTTATTTT 1 chr3R:24275602-24275722 ( 22) TTTATTTT 1 chr3L:17742688-17742808 ( 68) TTCGTTTT 1 chr3R:27137062-27137182 ( 90) TTCGTTTT 1 chrX:18642598-18642718 ( 91) TTCGTTTT 1 chr2L:13292237-13292357 ( 41) TTCGTTTT 1 chr3R:10387087-10387207 ( 6) TTCGTTTT 1 chr3R:30431451-30431571 ( 39) TTTTTTTT 1 chr2L:2801519-2801639 ( 66) TTGGTTTT 1 chrX:7067524-7067644 ( 67) TTTTTTTT 1 chr3R:22684972-22685092 ( 6) TTGGTTTT 1 chr3L:21417061-21417181 ( 106) TTTTTTTT 1 chr2R:6112863-6112983 ( 102) TTTTTTTT 1 chr3R:23940963-23941083 ( 56) TTTTTTTT 1 chrX:12801036-12801156 ( 96) TTGGTTTT 1 chr3R:10384613-10384733 ( 71) TTTTTTTT 1 chr3L:17958369-17958489 ( 70) TTTGTTTG 1 chr3L:14548525-14548645 ( 71) TTTGTTTG 1 chr3R:9878753-9878873 ( 112) TTTGTTTG 1 chr3R:11244629-11244749 ( 71) TTTGTTTG 1 chr3R:16981415-16981535 ( 51) TTTGTTTG 1 chr3R:25238933-25239053 ( 54) TTCATTTT 1 chrX:4942080-4942200 ( 64) TTCATTTT 1 chr2R:16882442-16882562 ( 18) TTCATTTT 1 chr2L:5149766-5149886 ( 28) TTCATTTT 1 chr3R:9891149-9891269 ( 81) TTGATTTT 1 chr3R:6419212-6419332 ( 88) TTGATTTT 1 chrX:6738117-6738237 ( 50) TTGATTTT 1 chr3R:10390044-10390164 ( 71) TTGATTTT 1 chr3L:10482635-10482755 ( 37) TTCTTTTT 1 chr3R:19051284-19051404 ( 103) TTCTTTTT 1 chr3R:21022908-21023028 ( 89) TTCTTTTT 1 chr3L:12803464-12803584 ( 23) TTTATTTG 1 chrX:2654098-2654218 ( 49) TTTATTTG 1 chr3R:19625948-19626068 ( 112) TTTATTTG 1 chr3R:18783341-18783461 ( 38) TTGTTTTT 1 chr2R:9189895-9190015 ( 110) TTCGTTTG 1 chr3L:5595349-5595469 ( 10) TTGTTTTT 1 chrX:3379465-3379585 ( 66) TTGGTTTG 1 chrX:11922756-11922876 ( 4) TTTGTGTT 1 chr2L:13804678-13804798 ( 18) TTTGTGTT 1 chr3R:9592531-9592651 ( 6) TTTGTGTT 1 chr2R:11657266-11657386 ( 57) TTTGATTT 1 chrX:15520995-15521115 ( 61) TTTGATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.1998 E= 3.2e+002 -1245 -1245 -1245 186 -1245 -1245 -1245 186 -1245 3 -38 110 19 -1245 111 -49 -289 -1245 -1245 181 -1245 -1245 -211 178 -1245 -1245 -1245 186 -1245 -1245 -38 158 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 56 E= 3.2e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.232143 0.178571 0.589286 0.303571 0.000000 0.500000 0.196429 0.035714 0.000000 0.000000 0.964286 0.000000 0.000000 0.053571 0.946429 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.178571 0.821429 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRTTTT MEME-4 regular expression -------------------------------------------------------------------------------- TT[TC][GA]TTTT -------------------------------------------------------------------------------- Time 24.68 secs. ******************************************************************************** ******************************************************************************** MOTIF AATGCCAA MEME-5 width = 8 sites = 10 llr = 104 E-value = 3.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a7::::aa pos.-specific C ::::aa:: probability G :3:a:::: matrix T ::a::::: bits 2.1 *** 1.9 * ****** 1.7 * ****** 1.5 * ****** Relative 1.3 * ****** Entropy 1.1 ******** (15.1 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AATGCCAA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:3440697-3440817 2 1.64e-05 G AATGCCAA ACACGAGCCA chr3L:11125775-11125895 44 1.64e-05 CTCTTTTATG AATGCCAA GAAGGTCGTC chr3R:22776651-22776771 28 1.64e-05 GCCACCAATA AATGCCAA CCTTTTGGAC chr2R:14448943-14449063 1 1.64e-05 . AATGCCAA GTTGTGTGGC chrX:3411619-3411739 26 1.64e-05 ATAAGCATAA AATGCCAA CTACGAGTCG chr2R:23420634-23420754 100 1.64e-05 GCCGAAATCA AATGCCAA CGAAAAGGGT chr3R:21169659-21169779 46 1.64e-05 CAACTTAAAC AATGCCAA AACCCAAAAC chrX:18642598-18642718 59 3.07e-05 TAATAGAAGC AGTGCCAA AACAGAAGCA chr2R:22179958-22180078 23 3.07e-05 AATTTGTCAC AGTGCCAA AAGGTGTGTG chr2R:22079505-22079625 92 3.07e-05 GCACGTGAGA AGTGCCAA AAAAAAAATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:3440697-3440817 1.6e-05 1_[+5]_111 chr3L:11125775-11125895 1.6e-05 43_[+5]_69 chr3R:22776651-22776771 1.6e-05 27_[+5]_85 chr2R:14448943-14449063 1.6e-05 [+5]_112 chrX:3411619-3411739 1.6e-05 25_[+5]_87 chr2R:23420634-23420754 1.6e-05 99_[+5]_13 chr3R:21169659-21169779 1.6e-05 45_[+5]_67 chrX:18642598-18642718 3.1e-05 58_[+5]_54 chr2R:22179958-22180078 3.1e-05 22_[+5]_90 chr2R:22079505-22079625 3.1e-05 91_[+5]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AATGCCAA width=8 seqs=10 chrX:3440697-3440817 ( 2) AATGCCAA 1 chr3L:11125775-11125895 ( 44) AATGCCAA 1 chr3R:22776651-22776771 ( 28) AATGCCAA 1 chr2R:14448943-14449063 ( 1) AATGCCAA 1 chrX:3411619-3411739 ( 26) AATGCCAA 1 chr2R:23420634-23420754 ( 100) AATGCCAA 1 chr3R:21169659-21169779 ( 46) AATGCCAA 1 chrX:18642598-18642718 ( 59) AGTGCCAA 1 chr2R:22179958-22180078 ( 23) AGTGCCAA 1 chr2R:22079505-22079625 ( 92) AGTGCCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.7151 E= 3.4e+004 191 -997 -997 -997 140 -997 37 -997 -997 -997 -997 186 -997 -997 211 -997 -997 213 -997 -997 -997 213 -997 -997 191 -997 -997 -997 191 -997 -997 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 3.4e+004 1.000000 0.000000 0.000000 0.000000 0.700000 0.000000 0.300000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATGCCAA MEME-5 regular expression -------------------------------------------------------------------------------- A[AG]TGCCAA -------------------------------------------------------------------------------- Time 30.39 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:10384613-10384733 4.58e-02 96_[+1(9.17e-05)]_16 chr3R:10381118-10381238 7.44e-03 27_[+2(6.06e-05)]_85 chr3R:10387087-10387207 1.33e-02 5_[+4(8.20e-05)]_58_[+2(2.09e-05)]_\ 41 chr3R:9494749-9494869 2.21e-01 120 chr2R:11773289-11773409 1.25e-02 120 chr3L:22474451-22474571 8.29e-02 72_[+1(2.36e-05)]_40 chr2L:19899045-19899165 1.13e-01 57_[+1(2.36e-05)]_55 chr3R:27294257-27294377 6.47e-02 53_[+1(5.10e-05)]_59 chr3R:21022908-21023028 5.57e-02 120 chr3R:16981415-16981535 3.68e-03 70_[+1(2.36e-05)]_42 chr3R:24275602-24275722 9.34e-05 21_[+4(5.91e-05)]_12_[+3(1.76e-05)]_\ 71 chrX:12801036-12801156 1.48e-02 42_[+1(6.33e-05)]_70 chr2R:16134434-16134554 5.13e-01 120 chr3L:16855392-16855512 4.53e-02 72_[+1(6.33e-05)]_40 chr3R:17713751-17713871 7.49e-03 65_[+1(2.36e-05)]_47 chr2R:21118319-21118439 2.85e-01 61_[+1(6.33e-05)]_51 chr2R:23616379-23616499 8.11e-02 41_[+1(5.10e-05)]_71 chr2L:11056930-11057050 1.08e-02 33_[+1(2.36e-05)]_79 chr2R:21614529-21614649 8.14e-01 120 chr3R:10395556-10395676 2.06e-01 111_[+4(5.91e-05)]_1 chr3L:16652302-16652422 1.01e-01 120 chr3R:18432999-18433119 1.02e-01 120 chr3R:10390044-10390164 1.58e-03 27_[+2(3.89e-05)]_85 chrX:6738117-6738237 5.62e-04 16_[+2(6.06e-05)]_96 chrX:16922323-16922443 3.66e-03 3_[+4(2.76e-05)]_19_[+1(5.10e-05)]_\ 82 chr3R:19625948-19626068 2.20e-02 120 chr3R:5623777-5623897 8.29e-02 30_[+1(9.17e-05)]_82 chr3L:18810588-18810708 1.42e-02 32_[+1(9.17e-05)]_18_[+2(6.06e-05)]_\ 54 chr2R:22426930-22427050 1.22e-03 68_[+1(2.36e-05)]_8_[+4(5.91e-05)]_\ 28 chr3R:19051284-19051404 2.83e-02 120 chr3L:16798877-16798997 3.44e-01 120 chr3R:11570116-11570236 8.89e-02 120 chr3R:17147786-17147906 1.70e-02 67_[+1(2.36e-05)]_45 chr2L:12055441-12055561 1.10e-01 120 chr3R:19793800-19793920 2.73e-02 43_[+1(2.36e-05)]_69 chr3L:19902031-19902151 1.29e-02 120 chr2R:11430611-11430731 1.02e-01 64_[+1(5.10e-05)]_48 chr2L:17471663-17471783 2.46e-04 41_[+2(3.89e-05)]_2_[+1(5.10e-05)]_\ 61 chr2L:8956548-8956668 3.17e-01 120 chr2R:7770750-7770870 2.32e-02 66_[+1(5.10e-05)]_46 chr3R:5073905-5074025 8.73e-02 35_[+1(2.36e-05)]_77 chr3L:20196467-20196587 3.68e-02 70_[+1(9.17e-05)]_42 chr2L:6371391-6371511 2.23e-01 72_[+1(2.36e-05)]_40 chr2L:2010511-2010631 1.97e-02 16_[+1(6.33e-05)]_96 chr3R:21169659-21169779 1.43e-04 3_[+2(2.09e-05)]_34_[+5(1.64e-05)]_\ 67 chr2R:10020394-10020514 1.29e-01 55_[+1(2.36e-05)]_57 chr3L:22870537-22870657 3.33e-01 120 chr2R:14246735-14246855 4.15e-02 41_[+1(2.36e-05)]_71 chr3R:4449406-4449526 1.39e-01 42_[+1(5.10e-05)]_70 chr3L:21839869-21839989 1.05e-02 9_[+3(1.76e-05)]_103 chr3L:6723374-6723494 7.11e-02 [+1(2.36e-05)]_112 chr2R:14352698-14352818 1.51e-01 88_[+1(9.17e-05)]_24 chr3R:24563178-24563298 9.80e-03 58_[+1(9.17e-05)]_54 chr2L:5149766-5149886 2.13e-03 94_[+1(2.36e-05)]_18 chrX:21065533-21065653 6.32e-01 120 chr3L:5595349-5595469 1.48e-02 120 chr3R:17147997-17148117 6.86e-01 120 chrX:1397956-1398076 6.07e-01 120 chr2R:21605474-21605594 4.36e-02 70_[+1(5.10e-05)]_42 chr3R:8528856-8528976 4.97e-01 120 chr3R:21007148-21007268 1.04e-01 36_[+1(5.10e-05)]_76 chr2R:23420634-23420754 1.41e-03 60_[+1(2.36e-05)]_31_[+5(1.64e-05)]_\ 13 chr2R:22079505-22079625 8.41e-04 81_[+1(5.10e-05)]_2_[+5(3.07e-05)]_\ 21 chr3R:21072201-21072321 1.18e-01 70_[+1(2.36e-05)]_42 chr3R:11128587-11128707 2.02e-02 99_[+1(5.10e-05)]_13 chr2L:20879952-20880072 5.83e-03 76_[+1(9.17e-05)]_36 chr3R:5279727-5279847 3.55e-02 52_[+1(2.36e-05)]_60 chr3L:5594278-5594398 7.90e-02 120 chr3R:8520941-8521061 1.52e-01 40_[+1(6.33e-05)]_72 chr2L:11737824-11737944 8.19e-03 46_[+1(5.10e-05)]_49_[+2(6.06e-05)]_\ 9 chr3R:10392070-10392190 2.92e-01 120 chr3R:19620142-19620262 1.08e-01 64_[+1(2.36e-05)]_48 chr3R:23940963-23941083 8.09e-03 79_[+1(5.10e-05)]_33 chr3R:31386059-31386179 4.57e-02 107_[+1(6.33e-05)]_5 chr2R:22179958-22180078 8.95e-02 22_[+5(3.07e-05)]_90 chrX:18248429-18248549 8.50e-03 120 chr2L:4389606-4389726 8.67e-02 111_[+1(5.10e-05)]_1 chr2L:10851600-10851720 5.83e-02 13_[+1(9.17e-05)]_99 chrX:13635103-13635223 5.83e-03 17_[+4(2.76e-05)]_22_[+4(2.76e-05)]_\ 8_[+1(5.10e-05)]_49 chr3R:31322456-31322576 1.31e-02 35_[+1(2.36e-05)]_77 chr3L:2394432-2394552 3.28e-02 5_[+1(9.17e-05)]_107 chr3R:23589995-23590115 8.21e-02 120 chr3R:6419212-6419332 1.09e-02 29_[+1(2.36e-05)]_83 chr3R:9592531-9592651 4.00e-03 72_[+1(5.10e-05)]_40 chrX:2651858-2651978 9.20e-02 12_[+1(2.36e-05)]_100 chr3R:25967099-25967219 6.59e-02 120 chr2L:13292237-13292357 1.44e-03 40_[+4(8.20e-05)]_72 chr3R:10393090-10393210 1.69e-02 13_[+1(9.17e-05)]_99 chr2R:9149523-9149643 4.80e-03 111_[+3(1.76e-05)]_1 chr2L:12620468-12620588 8.27e-02 15_[+1(5.10e-05)]_97 chr2R:7373240-7373360 1.88e-02 48_[+2(2.09e-05)]_64 chr2R:6112863-6112983 1.48e-01 120 chr3R:29082151-29082271 4.48e-02 95_[+1(2.36e-05)]_17 chr2R:16882442-16882562 4.70e-03 58_[+1(2.36e-05)]_54 chr3R:30425741-30425861 2.89e-02 120 chr2R:19339122-19339242 3.83e-01 120 chr2L:10469162-10469282 4.36e-01 120 chr3R:26128472-26128592 4.53e-01 120 chr3L:15539177-15539297 5.66e-02 66_[+1(2.36e-05)]_46 chr3R:8809921-8810041 1.27e-02 63_[+1(9.17e-05)]_36_[+5(6.17e-05)]_\ 5 chr2R:17712719-17712839 7.09e-02 38_[+1(9.17e-05)]_74 chr3L:5818967-5819087 3.03e-01 5_[+1(9.17e-05)]_107 chr3L:21417061-21417181 5.78e-04 63_[+3(1.76e-05)]_30_[+4(8.20e-05)]_\ 11 chr2R:12565709-12565829 4.38e-02 6_[+1(2.36e-05)]_106 chr2L:4893714-4893834 8.44e-02 120 chr3L:16979652-16979772 1.02e-01 120 chr2R:19415700-19415820 5.14e-03 29_[+4(5.91e-05)]_83 chr3L:20524555-20524675 2.92e-02 31_[+3(1.76e-05)]_81 chrX:18642598-18642718 4.21e-05 58_[+5(3.07e-05)]_24_[+4(8.20e-05)]_\ 2_[+1(2.36e-05)]_12 chrX:3411619-3411739 2.29e-05 25_[+5(1.64e-05)]_55_[+1(2.36e-05)]_\ 24 chr2R:23612819-23612939 1.46e-01 120 chr2L:141005-141125 1.60e-03 120 chr3L:18922207-18922327 5.15e-02 19_[+1(9.17e-05)]_93 chr3L:16157089-16157209 1.80e-02 46_[+3(1.76e-05)]_66 chr3R:22684972-22685092 1.26e-01 120 chr2R:10277492-10277612 4.37e-02 91_[+1(9.17e-05)]_21 chrX:4942080-4942200 1.66e-02 33_[+1(9.17e-05)]_79 chr2L:20879127-20879247 1.77e-02 19_[+1(9.17e-05)]_93 chr2R:9189895-9190015 2.43e-03 56_[+1(5.10e-05)]_56 chr2R:14448943-14449063 1.29e-03 [+5(1.64e-05)]_70_[+1(2.36e-05)]_34 chr3R:22776651-22776771 5.45e-02 27_[+5(1.64e-05)]_85 chr3L:136681-136801 1.94e-03 36_[+1(5.10e-05)]_64_[+3(3.81e-05)]_\ 4 chr2L:10199127-10199247 5.61e-03 100_[+1(2.36e-05)]_12 chr3R:9891149-9891269 1.62e-02 37_[+1(2.36e-05)]_75 chr3R:8108946-8109066 4.79e-05 31_[+2(2.09e-05)]_5_[+4(2.76e-05)]_\ 7_[+1(2.36e-05)]_53 chr3L:2876848-2876968 5.60e-01 120 chr2R:14232409-14232529 7.67e-02 120 chr3R:22046836-22046956 6.31e-01 120 chr2R:18695647-18695767 8.52e-02 47_[+1(2.36e-05)]_65 chr3R:10395756-10395876 8.23e-01 120 chr3R:11244629-11244749 1.31e-02 89_[+1(5.10e-05)]_23 chr2L:12487972-12488092 4.76e-03 16_[+1(2.36e-05)]_96 chr3L:7390840-7390960 1.24e-01 120 chrX:7067524-7067644 3.11e-03 108_[+3(1.76e-05)]_4 chr3L:12004311-12004431 2.19e-01 120 chrX:13633690-13633810 8.34e-02 120 chr3L:10658469-10658589 2.07e-01 44_[+1(2.36e-05)]_68 chr3R:27137062-27137182 2.27e-05 9_[+2(3.89e-05)]_63_[+1(2.36e-05)]_\ 1_[+4(8.20e-05)]_23 chr3R:18783341-18783461 4.00e-04 1_[+3(3.81e-05)]_56_[+1(6.33e-05)]_\ 47 chr3L:5657396-5657516 1.80e-01 120 chr3R:9878753-9878873 3.62e-02 88_[+1(9.17e-05)]_24 chr3L:12039156-12039276 6.74e-02 120 chr2L:19809794-19809914 8.72e-02 23_[+1(2.36e-05)]_89 chr2L:21296490-21296610 5.07e-02 79_[+1(9.17e-05)]_33 chr2R:9390306-9390426 3.46e-02 103_[+1(5.10e-05)]_9 chr3R:27293247-27293367 4.95e-01 120 chr3L:11125775-11125895 1.41e-03 6_[+2(2.09e-05)]_29_[+5(1.64e-05)]_\ 69 chr2L:5156542-5156662 3.35e-04 23_[+1(2.36e-05)]_30_[+2(2.09e-05)]_\ 51 chr2L:20325501-20325621 1.74e-02 72_[+2(2.09e-05)]_40 chr3L:10867060-10867180 7.56e-02 59_[+1(9.17e-05)]_53 chr3R:11154912-11155032 6.77e-02 120 chr2L:18515266-18515386 7.12e-02 74_[+1(5.10e-05)]_38 chr3R:9049230-9049350 1.75e-01 44_[+1(9.17e-05)]_68 chrX:2654098-2654218 4.55e-02 86_[+1(9.17e-05)]_26 chr3L:11050689-11050809 7.01e-02 120 chr3R:16014742-16014862 1.95e-01 73_[+1(2.36e-05)]_39 chrX:15520995-15521115 2.71e-02 120 chr3L:17615711-17615831 1.59e-01 120 chr2L:13434915-13435035 1.78e-03 120 chr3L:16769067-16769187 3.26e-01 44_[+4(5.91e-05)]_68 chr2L:7023740-7023860 1.38e-01 120 chr3R:7506730-7506850 4.99e-01 120 chr3R:18621433-18621553 1.11e-02 16_[+2(3.89e-05)]_96 chr3L:17742688-17742808 1.28e-02 67_[+4(8.20e-05)]_5_[+1(9.17e-05)]_\ 32 chr2L:13804678-13804798 1.06e-01 120 chr3L:11543303-11543423 2.20e-01 120 chr3R:28846041-28846161 2.36e-04 29_[+1(2.36e-05)]_6_[+4(2.76e-05)]_\ 69 chr3L:18952688-18952808 2.09e-02 89_[+1(2.36e-05)]_23 chr2L:8098483-8098603 2.05e-02 68_[+1(2.36e-05)]_44 chr3L:14548525-14548645 1.22e-03 90_[+1(2.36e-05)]_22 chr3L:2530157-2530277 6.67e-05 16_[+3(1.76e-05)]_31_[+1(2.36e-05)]_\ 57 chrX:7303908-7304028 7.60e-01 120 chrX:11464161-11464281 1.41e-02 18_[+4(2.76e-05)]_94 chr2R:23429135-23429255 1.11e-02 51_[+2(3.89e-05)]_37_[+1(6.33e-05)]_\ 16 chr2R:18717357-18717477 1.84e-02 31_[+1(2.36e-05)]_81 chr2L:21623090-21623210 1.08e-02 32_[+1(2.36e-05)]_80 chrX:11922756-11922876 8.85e-03 39_[+1(5.10e-05)]_73 chr2R:8705402-8705522 5.56e-02 17_[+1(9.17e-05)]_95 chr3R:10185427-10185547 3.91e-02 30_[+4(5.91e-05)]_82 chr3R:31461425-31461545 5.98e-03 2_[+3(3.81e-05)]_110 chr2R:24984908-24985028 2.85e-01 120 chrX:11881940-11882060 1.59e-01 120 chr3R:27007155-27007275 3.21e-01 120 chr2R:11786227-11786347 7.38e-01 120 chr3L:18993005-18993125 2.96e-02 100_[+1(9.17e-05)]_12 chrX:1229652-1229772 8.53e-02 120 chr3R:8353505-8353625 5.07e-03 82_[+2(3.89e-05)]_30 chr2L:16789991-16790111 1.56e-02 120 chr2R:7988747-7988867 1.28e-01 120 chr3L:9775843-9775963 3.89e-02 33_[+1(9.17e-05)]_79 chr3R:24285766-24285886 4.93e-02 82_[+1(5.10e-05)]_30 chr2R:9561425-9561545 3.27e-02 40_[+1(5.10e-05)]_72 chr3R:29158770-29158890 6.10e-02 42_[+1(9.17e-05)]_70 chr2R:11657266-11657386 1.02e-01 120 chr3L:6723580-6723700 1.08e-04 24_[+4(2.76e-05)]_5_[+4(2.76e-05)]_\ 4_[+4(5.91e-05)]_3_[+1(2.36e-05)]_52 chrX:13636677-13636797 2.66e-03 16_[+2(2.09e-05)]_96 chr3R:20891871-20891991 6.72e-02 24_[+1(9.17e-05)]_88 chr2L:19402045-19402165 3.07e-01 120 chr3R:17707163-17707283 1.73e-01 64_[+1(2.36e-05)]_48 chr2R:21721076-21721196 2.04e-01 68_[+1(6.33e-05)]_44 chr3R:14445206-14445326 4.81e-01 120 chr2R:11667844-11667964 8.20e-02 71_[+2(2.09e-05)]_41 chr3L:1098556-1098676 1.01e-01 42_[+1(5.10e-05)]_70 chr3L:5594480-5594600 3.22e-02 120 chr2L:6169215-6169335 4.11e-03 61_[+3(1.76e-05)]_51 chr2R:16667962-16668082 1.10e-01 76_[+1(5.10e-05)]_36 chr2R:6643992-6644112 9.25e-03 10_[+1(2.36e-05)]_102 chr2R:12479554-12479674 3.48e-02 78_[+1(5.10e-05)]_34 chr3L:12803464-12803584 1.45e-04 46_[+1(2.36e-05)]_57_[+2(6.06e-05)]_\ 1 chr2R:19287103-19287223 1.58e-02 13_[+1(5.10e-05)]_99 chr3R:26227005-26227125 3.24e-02 57_[+1(2.36e-05)]_55 chr2R:25024139-25024259 3.90e-02 70_[+1(2.36e-05)]_42 chrX:3444048-3444168 5.44e-02 120 chr3L:1739005-1739125 6.72e-01 120 chrX:9872992-9873112 8.02e-01 120 chr3L:19139258-19139378 1.15e-01 43_[+1(6.33e-05)]_10_[+1(5.10e-05)]_\ 51 chr2L:8104861-8104981 9.21e-04 40_[+2(2.09e-05)]_72 chr3L:17958369-17958489 1.52e-01 120 chr2L:7027661-7027781 5.42e-02 80_[+1(2.36e-05)]_32 chr2R:15863584-15863704 2.19e-02 49_[+1(5.10e-05)]_63 chr2R:16131969-16132089 2.12e-01 120 chr2L:1669419-1669539 1.59e-03 [+2(2.09e-05)]_33_[+1(6.33e-05)]_71 chr3R:16353417-16353537 7.36e-01 120 chr3R:24563378-24563498 7.75e-01 120 chr3R:24275806-24275926 6.52e-01 120 chr3R:16870850-16870970 2.53e-02 120 chr2R:16669719-16669839 1.59e-01 71_[+1(5.10e-05)]_41 chr2L:2801519-2801639 1.64e-01 120 chr3R:26213080-26213200 8.91e-02 120 chr2R:21075550-21075670 3.13e-01 120 chrX:757050-757170 1.01e-01 66_[+1(9.17e-05)]_46 chr3L:3346467-3346587 6.77e-01 120 chr3R:8112097-8112217 8.09e-03 28_[+4(2.76e-05)]_59_[+1(9.17e-05)]_\ 17 chrX:3440697-3440817 6.59e-03 1_[+5(1.64e-05)]_111 chr2L:4889338-4889458 7.52e-02 77_[+1(5.10e-05)]_35 chr3R:5841464-5841584 2.45e-01 120 chr3R:20961083-20961203 4.98e-01 120 chrX:3379465-3379585 1.22e-02 120 chr2R:11384454-11384574 3.78e-02 120 chr3R:30431451-30431571 7.95e-04 76_[+1(2.36e-05)]_36 chr3L:10482635-10482755 1.18e-01 120 chr3R:22536274-22536394 1.94e-01 120 chr2L:3055746-3055866 8.17e-01 120 chr3R:25238933-25239053 1.76e-02 90_[+1(5.10e-05)]_22 chr3L:11684627-11684747 1.37e-01 120 chrX:8490450-8490570 6.76e-02 7_[+1(2.36e-05)]_105 chr2L:21062702-21062822 1.21e-02 1_[+4(2.76e-05)]_111 chr2L:10529111-10529231 3.86e-02 120 chr3L:9776909-9777029 4.07e-02 9_[+1(2.36e-05)]_103 chr3L:3253796-3253916 1.62e-01 62_[+1(5.10e-05)]_50 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n01.farnam.hpc.yale.internal ********************************************************************************