******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/crp.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2R:12321158-12321278 1.0000 120 chr2L:4465101-4465221 1.0000 120 chr2L:13179195-13179315 1.0000 120 chr3R:7902645-7902765 1.0000 120 chr2L:12048889-12049009 1.0000 120 chr2R:23560457-23560577 1.0000 120 chr3R:15786632-15786752 1.0000 120 chrX:2344576-2344696 1.0000 120 chr2L:2744947-2745067 1.0000 120 chrX:3936266-3936386 1.0000 120 chr3R:22613667-22613787 1.0000 120 chr2L:13182580-13182700 1.0000 120 chr3R:9754601-9754721 1.0000 120 chr2L:16282832-16282952 1.0000 120 chr3R:11231822-11231942 1.0000 120 chr3L:16100158-16100278 1.0000 120 chrX:20426965-20427085 1.0000 120 chr2L:4794564-4794684 1.0000 120 chr2L:10743895-10744015 1.0000 120 chr3R:21878641-21878761 1.0000 120 chrX:2180759-2180879 1.0000 120 chr2R:24668282-24668402 1.0000 120 chr2L:1502846-1502966 1.0000 120 chr3R:11749549-11749669 1.0000 120 chr3L:16233071-16233191 1.0000 120 chr3L:2780791-2780911 1.0000 120 chr3R:25335193-25335313 1.0000 120 chr2R:12423485-12423605 1.0000 120 chr2R:13220149-13220269 1.0000 120 chr3R:18980945-18981065 1.0000 120 chr3R:11230488-11230608 1.0000 120 chr2R:16957424-16957544 1.0000 120 chr3R:8303995-8304115 1.0000 120 chr3L:16417018-16417138 1.0000 120 chr3R:30425151-30425271 1.0000 120 chrX:7967246-7967366 1.0000 120 chr3R:20831111-20831231 1.0000 120 chr2R:13206656-13206776 1.0000 120 chr3R:30177622-30177742 1.0000 120 chr3R:24918427-24918547 1.0000 120 chr2R:12692691-12692811 1.0000 120 chr2R:20870700-20870820 1.0000 120 chr3L:19845201-19845321 1.0000 120 chr3L:2782125-2782245 1.0000 120 chr3L:17427173-17427293 1.0000 120 chrX:14201301-14201421 1.0000 120 chr3R:14259916-14260036 1.0000 120 chr3L:18622255-18622375 1.0000 120 chr2L:20922908-20923028 1.0000 120 chrX:3936466-3936586 1.0000 120 chr3L:17035590-17035710 1.0000 120 chr3R:26058223-26058343 1.0000 120 chr3R:13699467-13699587 1.0000 120 chr3R:23995649-23995769 1.0000 120 chr2R:16142096-16142216 1.0000 120 chr3R:25489931-25490051 1.0000 120 chr2L:7013276-7013396 1.0000 120 chr2L:18606803-18606923 1.0000 120 chr2L:15005627-15005747 1.0000 120 chr2R:7655426-7655546 1.0000 120 chr2L:10728914-10729034 1.0000 120 chrX:12901042-12901162 1.0000 120 chr2R:19390057-19390177 1.0000 120 chr2R:24783468-24783588 1.0000 120 chr2R:16143083-16143203 1.0000 120 chr3R:25594292-25594412 1.0000 120 chr3L:690449-690569 1.0000 120 chr2L:4949735-4949855 1.0000 120 chr2R:12138691-12138811 1.0000 120 chr2L:19530272-19530392 1.0000 120 chr2R:24664333-24664453 1.0000 120 chr3L:19896039-19896159 1.0000 120 chr2R:24661478-24661598 1.0000 120 chr2L:8043302-8043422 1.0000 120 chr3R:10815183-10815303 1.0000 120 chr2L:12020888-12021008 1.0000 120 chr3L:12267455-12267575 1.0000 120 chr2L:16327016-16327136 1.0000 120 chrX:19618464-19618584 1.0000 120 chr3L:16348119-16348239 1.0000 120 chrX:5695176-5695296 1.0000 120 chr2R:17781889-17782009 1.0000 120 chr3L:15509525-15509645 1.0000 120 chr3R:11236152-11236272 1.0000 120 chr3R:9756309-9756429 1.0000 120 chr2L:6048601-6048721 1.0000 120 chr3L:6958048-6958168 1.0000 120 chrX:546583-546703 1.0000 120 chrX:11891928-11892048 1.0000 120 chr3L:17849673-17849793 1.0000 120 chr3R:17733489-17733609 1.0000 120 chr3R:30180113-30180233 1.0000 120 chr3R:5563621-5563741 1.0000 120 chrX:10220047-10220167 1.0000 120 chr2R:24195431-24195551 1.0000 120 chr2L:4818192-4818312 1.0000 120 chr3L:834048-834168 1.0000 120 chr3R:22468074-22468194 1.0000 120 chrX:254849-254969 1.0000 120 chr3L:20361561-20361681 1.0000 120 chr2R:23402249-23402369 1.0000 120 chr2L:8196826-8196946 1.0000 120 chr3L:3376689-3376809 1.0000 120 chr3L:18112910-18113030 1.0000 120 chr2R:23693920-23694040 1.0000 120 chr2R:24057153-24057273 1.0000 120 chr3L:20129096-20129216 1.0000 120 chr3R:19027316-19027436 1.0000 120 chr3R:17805237-17805357 1.0000 120 chr3R:24148886-24149006 1.0000 120 chrX:5916803-5916923 1.0000 120 chrX:1375408-1375528 1.0000 120 chr3R:7155016-7155136 1.0000 120 chrX:8294931-8295051 1.0000 120 chr3R:30459198-30459318 1.0000 120 chr2L:5528026-5528146 1.0000 120 chr2L:8686030-8686150 1.0000 120 chr2R:13205378-13205498 1.0000 120 chrX:10596057-10596177 1.0000 120 chr3R:27116657-27116777 1.0000 120 chr2L:2979243-2979363 1.0000 120 chr2R:18658176-18658296 1.0000 120 chr2R:11982826-11982946 1.0000 120 chr2R:13439220-13439340 1.0000 120 chr2L:5096320-5096440 1.0000 120 chr3L:21529287-21529407 1.0000 120 chr2L:11120247-11120367 1.0000 120 chr2L:2575030-2575150 1.0000 120 chr2L:1728639-1728759 1.0000 120 chr2R:20278900-20279020 1.0000 120 chr2L:10342598-10342718 1.0000 120 chrX:17423431-17423551 1.0000 120 chr2R:18613002-18613122 1.0000 120 chr2L:16286138-16286258 1.0000 120 chr2L:4198025-4198145 1.0000 120 chr2L:6036853-6036973 1.0000 120 chr3R:10885456-10885576 1.0000 120 chr3L:16587091-16587211 1.0000 120 chr3L:1964340-1964460 1.0000 120 chrX:15697410-15697530 1.0000 120 chr2R:14526183-14526303 1.0000 120 chr2L:18943882-18944002 1.0000 120 chr2L:16287344-16287464 1.0000 120 chrX:8152813-8152933 1.0000 120 chr2L:10009858-10009978 1.0000 120 chr2R:16196512-16196632 1.0000 120 chr3R:11407900-11408020 1.0000 120 chr2R:18426351-18426471 1.0000 120 chr2L:21397290-21397410 1.0000 120 chr3L:15163578-15163698 1.0000 120 chr3L:4193877-4193997 1.0000 120 chr3R:14513578-14513698 1.0000 120 chr3L:20769487-20769607 1.0000 120 chr3R:20592595-20592715 1.0000 120 chr3L:9679069-9679189 1.0000 120 chrX:8121079-8121199 1.0000 120 chr3L:18667287-18667407 1.0000 120 chr2R:17518128-17518248 1.0000 120 chr2R:13439015-13439135 1.0000 120 chr3R:25335396-25335516 1.0000 120 chr3L:4286962-4287082 1.0000 120 chrX:8251685-8251805 1.0000 120 chr3L:8634034-8634154 1.0000 120 chr3R:24659564-24659684 1.0000 120 chr2R:13485298-13485418 1.0000 120 chr2L:3711695-3711815 1.0000 120 chr3L:8954421-8954541 1.0000 120 chr3L:3060150-3060270 1.0000 120 chr3R:14879358-14879478 1.0000 120 chr2L:16879394-16879514 1.0000 120 chr2R:12425516-12425636 1.0000 120 chr3L:11691574-11691694 1.0000 120 chr2R:22483217-22483337 1.0000 120 chr3R:11626788-11626908 1.0000 120 chrX:15139742-15139862 1.0000 120 chrX:9159891-9160011 1.0000 120 chr2L:13367547-13367667 1.0000 120 chr3R:13710787-13710907 1.0000 120 chrX:8906938-8907058 1.0000 120 chr3L:2980928-2981048 1.0000 120 chr2L:10270052-10270172 1.0000 120 chr3R:18667807-18667927 1.0000 120 chr3L:6082685-6082805 1.0000 120 chr2L:7182022-7182142 1.0000 120 chr3L:5146016-5146136 1.0000 120 chr2R:23553950-23554070 1.0000 120 chr2R:10421311-10421431 1.0000 120 chr3R:28696160-28696280 1.0000 120 chr3R:10045478-10045598 1.0000 120 chr2L:3319817-3319937 1.0000 120 chr3R:30465732-30465852 1.0000 120 chr3L:20823494-20823614 1.0000 120 chr2R:21025055-21025175 1.0000 120 chr2R:17407215-17407335 1.0000 120 chr2R:21312656-21312776 1.0000 120 chr2R:19396238-19396358 1.0000 120 chr2R:7463437-7463557 1.0000 120 chr3L:1798695-1798815 1.0000 120 chr3R:10048815-10048935 1.0000 120 chr3R:28544770-28544890 1.0000 120 chrX:8900218-8900338 1.0000 120 chr2L:1164389-1164509 1.0000 120 chr3R:10708278-10708398 1.0000 120 chr2L:18677122-18677242 1.0000 120 chr3R:7913252-7913372 1.0000 120 chr3L:9358868-9358988 1.0000 120 chr3L:10886057-10886177 1.0000 120 chr2L:9911917-9912037 1.0000 120 chr3L:8178309-8178429 1.0000 120 chr3L:5136324-5136444 1.0000 120 chr2L:14348759-14348879 1.0000 120 chr3R:29723109-29723229 1.0000 120 chr3R:26876572-26876692 1.0000 120 chrX:1460601-1460721 1.0000 120 chr2R:14860713-14860833 1.0000 120 chr3L:711846-711966 1.0000 120 chr2L:19497984-19498104 1.0000 120 chr2L:1752097-1752217 1.0000 120 chr2R:24574461-24574581 1.0000 120 chr3R:14890156-14890276 1.0000 120 chr3L:16419302-16419422 1.0000 120 chr3R:15933821-15933941 1.0000 120 chr2L:8521829-8521949 1.0000 120 chr2R:13239394-13239514 1.0000 120 chrX:1342010-1342130 1.0000 120 chrX:6661406-6661526 1.0000 120 chr2L:5100113-5100233 1.0000 120 chr2R:9145194-9145314 1.0000 120 chr2R:22637681-22637801 1.0000 120 chr3L:8297039-8297159 1.0000 120 chr2L:12063201-12063321 1.0000 120 chr2R:10110867-10110987 1.0000 120 chr3L:4021395-4021515 1.0000 120 chr2R:7539695-7539815 1.0000 120 chr3R:5463294-5463414 1.0000 120 chr2L:4973907-4974027 1.0000 120 chr2L:21154024-21154144 1.0000 120 chr3R:25493466-25493586 1.0000 120 chr3R:22747576-22747696 1.0000 120 chr3R:9456524-9456644 1.0000 120 chr3L:1884842-1884962 1.0000 120 chr3R:16614345-16614465 1.0000 120 chr3R:7246954-7247074 1.0000 120 chr3R:26863337-26863457 1.0000 120 chr2L:18158655-18158775 1.0000 120 chr3R:19641197-19641317 1.0000 120 chr3L:21617505-21617625 1.0000 120 chr2L:19114316-19114436 1.0000 120 chr3L:11815345-11815465 1.0000 120 chr2L:12436363-12436483 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_crp/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/crp.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.291 C 0.207 G 0.208 T 0.294 Background letter frequencies (from file dataset with add-one prior applied): A 0.291 C 0.207 G 0.208 T 0.294 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CAGCTGWT MEME-1 width = 8 sites = 207 llr = 1965 E-value = 1.8e-357 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :a::::3: pos.-specific C a::a:::1 probability G ::a::a:1 matrix T ::::a:68 bits 2.3 * * 2.0 * ** * 1.8 ****** 1.6 ****** Relative 1.4 ****** Entropy 1.1 ****** (13.7 bits) 0.9 ****** * 0.7 ****** * 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CAGCTGTT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:12436363-12436483 59 1.37e-05 CGTTGACAAG CAGCTGTT TGTGCTGCCA chr3L:11815345-11815465 106 1.37e-05 GATTATCGAA CAGCTGTT TAACTGT chr2L:19114316-19114436 64 1.37e-05 CGCAGGCAAA CAGCTGTT TCTCCCAATT chr3R:26863337-26863457 69 1.37e-05 ACCAAACAAA CAGCTGTT GCGCGGGCAT chr3R:9456524-9456644 28 1.37e-05 TAAGAATACT CAGCTGTT CTGATTGGAG chr2L:21154024-21154144 34 1.37e-05 ACATCTTAAT CAGCTGTT CCAAGTACAA chr2L:4973907-4974027 84 1.37e-05 CACATACGAA CAGCTGTT TTTTCCAAAC chr2R:22637681-22637801 7 1.37e-05 TTTCTA CAGCTGTT GACTAAAGAA chr2R:9145194-9145314 74 1.37e-05 AGAAGTCAAT CAGCTGTT GCTGCTTGCA chrX:6661406-6661526 84 1.37e-05 CACTGATACA CAGCTGTT TTTATTTATT chrX:1342010-1342130 103 1.37e-05 ATTGCTGTTA CAGCTGTT CGCGCATATG chr3R:15933821-15933941 42 1.37e-05 CATCTCCAAT CAGCTGTT TCACCTGCTT chr3L:16419302-16419422 28 1.37e-05 GCGTGGTGAT CAGCTGTT TCTACAGCTG chr2R:14860713-14860833 49 1.37e-05 TTTGTGGTAT CAGCTGTT TGGCGAGTGC chr3R:29723109-29723229 51 1.37e-05 CGACACAAGT CAGCTGTT CCGCGCCGac chr3L:5136324-5136444 55 1.37e-05 GCCCCTTCAT CAGCTGTT TCTTTATTTA chr2L:9911917-9912037 87 1.37e-05 TGGCTAACGA CAGCTGTT CGCAACGCCG chr3L:10886057-10886177 62 1.37e-05 AGCAGAGTCA CAGCTGTT CCGGAAAAGC chr3L:9358868-9358988 69 1.37e-05 TTTTTGCCAC CAGCTGTT GCGTCCAACA chr3R:7913252-7913372 35 1.37e-05 TAAAGCGAAT CAGCTGTT GCCTTCGGGC chrX:8900218-8900338 40 1.37e-05 TCCCTCTAAT CAGCTGTT GTGCCGGCTG chr3R:28544770-28544890 45 1.37e-05 GAAATCAAAT CAGCTGTT TTACAGCGCC chr3R:10048815-10048935 40 1.37e-05 AATCAATGCT CAGCTGTT TCTATCGATG chr2R:7463437-7463557 72 1.37e-05 CCCTGGAAAT CAGCTGTT GCTGGCGGGA chr2R:21025055-21025175 56 1.37e-05 CACTGGCGAA CAGCTGTT TTTTGTCAAT chr3R:10045478-10045598 43 1.37e-05 GTTTTCGAAT CAGCTGTT CGTTATGCTA chr2R:23553950-23554070 3 1.37e-05 AT CAGCTGTT GACGCACTAG chr3L:5146016-5146136 110 1.37e-05 GCCATGTGAT CAGCTGTT CGG chr3R:18667807-18667927 70 1.37e-05 CCCTGGCAAC CAGCTGTT CGGCGATGTG chrX:8906938-8907058 88 1.37e-05 GAGTGCCCAC CAGCTGTT TGATCTCAAT chr3R:13710787-13710907 91 1.37e-05 CGCGTGTTAT CAGCTGTT CTTGTTGGTC chr2L:13367547-13367667 79 1.37e-05 ATTTTGTAAA CAGCTGTT TCGGCGTCGG chrX:15139742-15139862 52 1.37e-05 TATGTTAAAT CAGCTGTT CCTTCAAAAG chr3R:11626788-11626908 81 1.37e-05 ATAATAAAAC CAGCTGTT GCATCACAAT chr3L:11691574-11691694 80 1.37e-05 GCCTGATAAT CAGCTGTT TGTTTGTTAT chr2L:16879394-16879514 88 1.37e-05 CGCCATAAAA CAGCTGTT ACAGAAACAA chr2L:3711695-3711815 25 1.37e-05 CAAACATTAA CAGCTGTT CGATGGCAGA chr2R:13439015-13439135 80 1.37e-05 TACCTCATAA CAGCTGTT CGCAATCTAT chr2R:17518128-17518248 51 1.37e-05 ACGCACAAAT CAGCTGTT TGTTTTTATG chr3L:18667287-18667407 76 1.37e-05 CTTTGCGCAT CAGCTGTT GCCTCGTTCG chr3R:20592595-20592715 81 1.37e-05 TGTTACGGAT CAGCTGTT TTATTTAACA chr3L:4193877-4193997 95 1.37e-05 AAGAAGCAAT CAGCTGTT GCCGTTTTCA chr2R:18426351-18426471 57 1.37e-05 CAACGTAAAA CAGCTGTT TGCTTTGACG chr3R:11407900-11408020 41 1.37e-05 GCAACAAAAA CAGCTGTT CGTACATTAC chr3L:1964340-1964460 46 1.37e-05 CTTTTACAAA CAGCTGTT TCATGGAAGT chr3R:10885456-10885576 48 1.37e-05 CACCGCGCAA CAGCTGTT CGTGCTATCG chr2L:16286138-16286258 46 1.37e-05 TGCGGGTGCG CAGCTGTT TTCTACCTCC chr2R:18613002-18613122 33 1.37e-05 AATATCCAAA CAGCTGTT TCAACGCCAG chrX:17423431-17423551 96 1.37e-05 GCACTGCTGT CAGCTGTT TTTAAGTAAA chr2R:20278900-20279020 37 1.37e-05 CTGTTAAGCT CAGCTGTT CGGTATTGAA chr2L:2575030-2575150 29 1.37e-05 CAGGCGTCAA CAGCTGTT CTGAACAAAA chr2L:11120247-11120367 59 1.37e-05 TGACAGGCAC CAGCTGTT TGTCTTATGC chr2L:5096320-5096440 49 1.37e-05 GTGCTAACAT CAGCTGTT GGGGGCGCGT chr2R:18658176-18658296 107 1.37e-05 AGATACCAAA CAGCTGTT TGACGC chrX:10596057-10596177 89 1.37e-05 GCTTACCAGT CAGCTGTT TAGCCGGCAG chr3R:30459198-30459318 47 1.37e-05 AAGCTGGAAA CAGCTGTT CTCCCACGCA chr3L:20129096-20129216 85 1.37e-05 ACACTGCGCT CAGCTGTT TAGTGACTTC chr3L:3376689-3376809 52 1.37e-05 TAGTCGCAGT CAGCTGTT GCAACGATAA chr2R:23402249-23402369 48 1.37e-05 TGATAGAGGT CAGCTGTT AGAGTGGCCA chrX:10220047-10220167 49 1.37e-05 CTAAAAAACA CAGCTGTT TACATCGCTC chr3R:30180113-30180233 86 1.37e-05 CTACCATCAT CAGCTGTT TTGGTATTTT chrX:546583-546703 18 1.37e-05 AGAAAACGAT CAGCTGTT TCTATTTATT chr3L:15509525-15509645 86 1.37e-05 CCCTGGCGCT CAGCTGTT CGTGCGGCGA chrX:5695176-5695296 53 1.37e-05 TGCGGATAAC CAGCTGTT TTGCTATCGC chr2L:12020888-12021008 70 1.37e-05 CTTGAGGAAT CAGCTGTT GATCAGTGTG chr2R:24664333-24664453 101 1.37e-05 GGATCTAAAT CAGCTGTT GTGTTGTAAG chr2L:4949735-4949855 41 1.37e-05 TGATAGCAAT CAGCTGTT GCTTTGGCAT chr3L:690449-690569 75 1.37e-05 TTTGCACAAA CAGCTGTT GTCGCACTGT chr2R:16143083-16143203 57 1.37e-05 TGCCGACAAC CAGCTGTT GCTCACAAGC chr2R:19390057-19390177 47 1.37e-05 AAGCAAAATA CAGCTGTT TCGCCTTCCA chr2L:10728914-10729034 59 1.37e-05 GCAGTCGCTA CAGCTGTT TGGTGTTTTA chr2L:18606803-18606923 59 1.37e-05 GTCCTATTAT CAGCTGTT TATTTCCACA chr2R:16142096-16142216 90 1.37e-05 GATTAACAGT CAGCTGTT TACGTCTTGC chr3R:13699467-13699587 74 1.37e-05 TGTCAGCAGT CAGCTGTT CGTCGCTCGC chr3L:17035590-17035710 72 1.37e-05 CTGCTCCAAT CAGCTGTT ATGTTATGCC chr3L:2782125-2782245 97 1.37e-05 AATGTCCGAA CAGCTGTT TACAATGAAG chr3R:30177622-30177742 61 1.37e-05 TCGAGTCGAT CAGCTGTT CGGCAGTGTG chr2R:13206656-13206776 73 1.37e-05 TTCAGCCGGT CAGCTGTT GCTTCCGATA chr3R:20831111-20831231 30 1.37e-05 CTACAGCGAT CAGCTGTT GGCGACCGCA chr3R:30425151-30425271 50 1.37e-05 GATGTGTAAT CAGCTGTT CTCTTCGATA chr3R:8303995-8304115 23 1.37e-05 GTCTGCCGAT CAGCTGTT TTCGCTGAGA chr2R:13220149-13220269 91 1.37e-05 TAGCGGCAAT CAGCTGTT TCATAGGGTT chr2R:12423485-12423605 69 1.37e-05 GCTGTCAGAT CAGCTGTT GTTGTTTCCA chr3L:16233071-16233191 45 1.37e-05 AGTTTCATAT CAGCTGTT TTTTGTTATT chr3R:11749549-11749669 107 1.37e-05 AAACTATGAA CAGCTGTT CAATGA chr2L:1502846-1502966 85 1.37e-05 TCTTGGCGCA CAGCTGTT TGGCTTACAT chr3R:21878641-21878761 41 1.37e-05 ATCGAATCAA CAGCTGTT CTGCAATCGA chr2L:10743895-10744015 12 1.37e-05 GATTCTGCAT CAGCTGTT TGAGTTCTGA chrX:20426965-20427085 78 1.37e-05 GCTTCACCAT CAGCTGTT GCCGAgttat chr3R:11231822-11231942 58 1.37e-05 TTTACTGGAT CAGCTGTT CGCTGCAACG chr3R:9754601-9754721 56 1.37e-05 TTTGAACCAA CAGCTGTT CCGACAGTCA chr2L:13182580-13182700 20 1.37e-05 TGTCCTCAGT CAGCTGTT CGCCGCTGCA chr3R:15786632-15786752 55 1.37e-05 TGGCGTGTAA CAGCTGTT AAGTCTGCAC chr2R:23560457-23560577 52 1.37e-05 CTGTTGTGGA CAGCTGTT GTGGCTGCTC chr2L:12048889-12049009 48 1.37e-05 GACGGCTAAA CAGCTGTT CAACAGTGTG chr2L:4465101-4465221 67 1.37e-05 AGATGATGAT CAGCTGTT TGTTGTTTAT chr2R:12321158-12321278 67 1.37e-05 CCTGCCGGAA CAGCTGTT AAAACAGACT chr3R:16614345-16614465 38 2.73e-05 TACAACTAGA CAGCTGAT TCTGATTGTC chr3L:1884842-1884962 71 2.73e-05 GCTGATAAGT CAGCTGAT ATCGGGGAAG chr2R:7539695-7539815 28 2.73e-05 GCACTAAAAT CAGCTGAT CACGAAGCAC chr2R:10110867-10110987 22 2.73e-05 CAGTGATAAC CAGCTGAT CAACAGCTGA chr3L:8297039-8297159 111 2.73e-05 CGACTGCCAA CAGCTGAT AT chr2R:24574461-24574581 103 2.73e-05 GCACACTAAA CAGCTGAT TCGTTTCTTG chr2L:14348759-14348879 18 2.73e-05 AAGCGGAAAA CAGCTGAT ATGTTGCGGC chr3L:8178309-8178429 93 2.73e-05 ACAAGCAGAG CAGCTGAT TTTTTTGGCG chr2L:18677122-18677242 43 2.73e-05 AACAAATAAA CAGCTGAT TAGGCAGTGG chr2R:21312656-21312776 7 2.73e-05 CTCAAC CAGCTGAT GACCACAAAA chr3R:28696160-28696280 83 2.73e-05 ACTGGCGTTA CAGCTGAT TGAAATCATA chr2R:10421311-10421431 102 2.73e-05 GCTGATCCAA CAGCTGAT CATTTTCCAA chr3L:6082685-6082805 10 2.73e-05 GAATTTCAT CAGCTGAT TGGCTCGAAA chr3L:2980928-2981048 71 2.73e-05 CAATGGCGAA CAGCTGAT CTGGCTCGCG chrX:9159891-9160011 62 2.73e-05 ACAAACCAAA CAGCTGAT TAGAGCTGGC chr3L:3060150-3060270 87 2.73e-05 AGGCCTCGAA CAGCTGAT TTGGCCACGA chr3L:8634034-8634154 54 2.73e-05 CCACGAGCAA CAGCTGAT CAAGCCTGGT chr3L:9679069-9679189 39 2.73e-05 AATTATAAAG CAGCTGAT TTTTGTTTTG chr3L:20769487-20769607 18 2.73e-05 ACAAGTATAA CAGCTGAT GTATTCTACG chr2L:18943882-18944002 49 2.73e-05 CGAGCAGAGC CAGCTGAT TTAAGCGTTG chr2L:4198025-4198145 40 2.73e-05 CACTGGCGAA CAGCTGAT TCCGCTGTTA chr2L:10342598-10342718 11 2.73e-05 CAGCTGATAT CAGCTGAT CTTTGCCTTA chr3L:21529287-21529407 11 2.73e-05 TTGGATCTAT CAGCTGAT TAGTATTACC chr2R:11982826-11982946 104 2.73e-05 TTGTTCAGCA CAGCTGAT AGTAAAAAT chr3R:27116657-27116777 83 2.73e-05 CGATAGGCAA CAGCTGAT TGAGTGATTT chr2L:5528026-5528146 46 2.73e-05 AGAGGCGCCG CAGCTGAT GCAGTTTGAG chr3L:18112910-18113030 31 2.73e-05 CTTGATAAAA CAGCTGAT ATGGCTCAAT chrX:254849-254969 44 2.73e-05 TCGAAACGAA CAGCTGAT TTTTGTTTTG chr3R:22468074-22468194 63 2.73e-05 CCGTTGATAA CAGCTGAT TGATAAGAAC chr2L:4818192-4818312 22 2.73e-05 ATTAAATAAA CAGCTGAT GGACTCAATG chr2R:24195431-24195551 27 2.73e-05 CCGCTCTTGC CAGCTGAT TGCCCGTTTC chr3L:6958048-6958168 47 2.73e-05 CAGACTAAAA CAGCTGAT CGTAACGGGG chr3R:11236152-11236272 96 2.73e-05 AAACAGACAA CAGCTGAT GTGCATCTTC chrX:19618464-19618584 52 2.73e-05 ACGAGCGGAA CAGCTGAT TAGTCTGTGC chr3L:12267455-12267575 77 2.73e-05 CTCCGCAACT CAGCTGAT CGATCAAACA chr2R:24661478-24661598 35 2.73e-05 TGGTAGTAAA CAGCTGAT ACAATTTGCA chr2R:12138691-12138811 72 2.73e-05 TCACACTAGA CAGCTGAT TTTTTCCAAC chr2R:24783468-24783588 23 2.73e-05 TTGGAGCCAT CAGCTGAT CGGCGCGCGG chr2L:7013276-7013396 106 2.73e-05 CTATTATCAA CAGCTGAT CGCACGA chr3R:26058223-26058343 61 2.73e-05 ATCTCGTGAA CAGCTGAT TGAAGAATTC chr2R:20870700-20870820 110 2.73e-05 CAAATGATCT CAGCTGAT CAG chr3R:24918427-24918547 41 2.73e-05 TAGGGCCAAA CAGCTGAT TCCGCCTGGC chr3R:18980945-18981065 58 2.73e-05 TTATCGCCGA CAGCTGAT TCTCAGTATA chr3R:25335193-25335313 75 2.73e-05 CATTGTGAAA CAGCTGAT TGCATAAACA chr3L:2780791-2780911 96 2.73e-05 TTTCTGTAAA CAGCTGAT TGCTTGCTAT chr2R:24668282-24668402 58 2.73e-05 ACGAACAAAA CAGCTGAT CGGCAAAATA chr3R:22613667-22613787 35 2.73e-05 AAAAAATAAA CAGCTGAT AAAAGTGGTT chrX:3936266-3936386 4 2.73e-05 GAA CAGCTGAT TTGTCTGCAT chr3R:7902645-7902765 77 2.73e-05 CACAAGCTTT CAGCTGAT TTTTGGCGCC chr2R:12425516-12425636 56 3.69e-05 ACGTCGTCAT CAGCTGTC CAACAAGCAA chrX:8121079-8121199 56 3.69e-05 TTCTTCAAAT CAGCTGTC CCGGAGTGTG chr3R:24148886-24149006 63 3.69e-05 AAGGCAAAAT CAGCTGTC GCCAGCGCTG chr3R:19027316-19027436 54 3.69e-05 TCACACTGCG CAGCTGTC AGAAGTCCAG chr3L:17849673-17849793 27 3.69e-05 TCACTGTTCA CAGCTGTC GTACCGGCTT chr3R:10815183-10815303 59 3.69e-05 AATTTTAAAA CAGCTGTC CCGCTGGCGC chr2L:19530272-19530392 16 3.69e-05 TTACTGGAAA CAGCTGTC TATTACAGTG chr3R:25594292-25594412 86 3.69e-05 CTGCAAGAAT CAGCTGTC ACTTGCCAGC chr2L:1752097-1752217 31 4.66e-05 CGGGCGTGAA CAGCTGTG GCTATCGCAG chrX:1460601-1460721 53 4.66e-05 CGCCGGCAAT CAGCTGTG CCTTCCAGTC chr2R:13485298-13485418 73 4.66e-05 AATTTCACAT CAGCTGTG CACTAACGAT chr3R:24659564-24659684 70 4.66e-05 TAATTGTAAA CAGCTGTG CGAGAAGCAT chr2L:21397290-21397410 60 4.66e-05 acgaggcgat cagctgtg agagctttaa chr2L:6036853-6036973 4 4.66e-05 TTG CAGCTGTG TTTTCTTTTC chr3L:20361561-20361681 34 4.66e-05 TGGCAAATAT CAGCTGTG TCAGTTGTTA chr2R:17781889-17782009 15 4.66e-05 TTTAACAAAA CAGCTGTG TGGAGATGGG chr3R:23995649-23995769 33 4.66e-05 TCTGCGAAAA CAGCTGTG GCTATTGTCT chr3R:14259916-14260036 75 4.66e-05 TAACATTGAA CAGCTGTG CCACCAGTGC chrX:14201301-14201421 62 4.66e-05 CCCCGCCGAT CAGCTGTG CCCAAGAACG chr2L:4794564-4794684 45 4.66e-05 CGGTATTAAT CAGCTGTG TTCTCACAAA chr3R:5463294-5463414 101 5.62e-05 CTGGCAGACC CAGCTGAC AGCGTAGAAA chr2L:8521829-8521949 61 5.62e-05 AATACAATAT CAGCTGAC CACATTTGAG chr3R:14890156-14890276 63 5.62e-05 TTTCCACGAA CAGCTGAC TGGCCGCAGC chr3R:10708278-10708398 63 5.62e-05 TCATACTGGC CAGCTGAC CGGCTAGGGA chr3L:8954421-8954541 79 5.62e-05 ATACCACAAA CAGCTGAC ACGTTAGAGT chr3R:14513578-14513698 46 5.62e-05 GGGTTATAAA CAGCTGAC TGCTGGGCTC chrX:15697410-15697530 54 5.62e-05 ACTGCCGGAT CAGCTGAC TGACTTTTCT chr2R:23693920-23694040 73 5.62e-05 GAAGTGAAAA CAGCTGAC AGCAGCAGAT chr3L:834048-834168 70 5.62e-05 TTCTTCAAAA CAGCTGAC AGCTAAAAAC chr3R:5563621-5563741 9 5.62e-05 AAATCAAA CAGCTGAC GAGTAGAATT chrX:12901042-12901162 80 5.62e-05 GCTGGCAAAA CAGCTGAC TGGCCATCTA chr2R:16957424-16957544 52 5.62e-05 CACTCAGAAT CAGCTGAC TTGGGTGGTT chr2R:13239394-13239514 57 7.55e-05 TGTGGCCGAT CAGCTGAG TCTAACAGTC chrX:8251685-8251805 16 7.55e-05 GCCGCGTTGA CAGCTGGT CAATCGCAAT chr3L:4286962-4287082 91 7.55e-05 GTTCCACGGA CAGCTGAG CAGGCATTGT chr2L:10009858-10009978 88 7.55e-05 ACAATACAAA CAGCTGAG CTTACAAGCT chr2L:16287344-16287464 8 7.55e-05 CATGCGT CAGCTGGT CTCAGCTGCT chr2L:2979243-2979363 38 7.55e-05 AAGTTCGAAA CAGCTGAG CCGCAGATGC chr2L:8196826-8196946 72 7.55e-05 ACGCTTCTAA CAGCTGAG CAGCTTTTCA chr2L:15005627-15005747 113 7.55e-05 CCACACACAT CAGCTGGT chr2L:20922908-20923028 12 7.55e-05 TGACTTTAAG CAGCTGAG AGTCGCTGAG chr3L:19845201-19845321 55 7.55e-05 CACCTCTAAT CAGCTGAG CGCCGATGGC chr2L:13179195-13179315 52 7.55e-05 AGCCGCCGAA CAGCTGAG TTTGTTGTTA chr3R:7246954-7247074 37 8.51e-05 CGGAGCGCAA CAGCTGCT CAGAAGCGGA chr3R:14879358-14879478 78 8.51e-05 CAGCTGAAGT CAGCTGCT TTTTGTTTAC chrX:1375408-1375528 108 8.51e-05 gGGCGCGAAT CAGCTGCT GGAAC chr2L:5100113-5100233 102 9.20e-05 CTGACAGCGT CAGCTGGC CTAACAGCAA chr3R:26876572-26876692 45 9.20e-05 GCAGCAGAAA CAGCTGGC TGAGCACCAG chr3R:17733489-17733609 106 9.20e-05 CCCTGGCGAA CAGCTGGC TTTGAAA chr3R:11230488-11230608 67 9.20e-05 CAAATTTCAG CAGCTGGC ACGCGGGCCT chrX:2180759-2180879 96 9.20e-05 AAACTGCAAT CAGCTGGC GCAGTGATGG chr3R:19641197-19641317 49 9.88e-05 AGAGGCAAAC CAGCTGGG TTTTTTTGCC chrX:8152813-8152933 93 9.88e-05 ACACTACCAT CAGCTGGG GAAAACCACC chrX:7967246-7967366 59 1.06e-04 TTAAGCTTTC CAGCTGCC CTTCTAATCC chr3L:15163578-15163698 46 1.32e-04 TACGGCCAAA CAGATGTT CGCTGTGGTT chr3L:1798695-1798815 51 1.61e-04 GAAAAGGTGG CAACTGTT CCGATTATGT chr3L:16100158-16100278 106 1.61e-04 TCCACTTTGC CGGCTGTT GTTACGT chr2L:16327016-16327136 19 1.80e-04 CGGGTGATAA CAGATGAT TTTAAGAGCA chrX:3936466-3936586 4 1.80e-04 GAA CAGATGAT CTCTCAGCAT chr2L:3319817-3319937 70 2.28e-04 ATACAGCAAT CATCTGTT TAGCCAAGTT chr2R:12692691-12692811 35 3.29e-04 CTCCAAGTTA CAACTGTG TGCTGCCACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:12436363-12436483 1.4e-05 58_[+1]_54 chr3L:11815345-11815465 1.4e-05 105_[+1]_7 chr2L:19114316-19114436 1.4e-05 63_[+1]_49 chr3R:26863337-26863457 1.4e-05 68_[+1]_44 chr3R:9456524-9456644 1.4e-05 27_[+1]_85 chr2L:21154024-21154144 1.4e-05 33_[+1]_79 chr2L:4973907-4974027 1.4e-05 83_[+1]_29 chr2R:22637681-22637801 1.4e-05 6_[+1]_106 chr2R:9145194-9145314 1.4e-05 73_[+1]_39 chrX:6661406-6661526 1.4e-05 83_[+1]_29 chrX:1342010-1342130 1.4e-05 102_[+1]_10 chr3R:15933821-15933941 1.4e-05 41_[+1]_71 chr3L:16419302-16419422 1.4e-05 27_[+1]_85 chr2R:14860713-14860833 1.4e-05 48_[+1]_64 chr3R:29723109-29723229 1.4e-05 50_[+1]_62 chr3L:5136324-5136444 1.4e-05 54_[+1]_58 chr2L:9911917-9912037 1.4e-05 86_[+1]_26 chr3L:10886057-10886177 1.4e-05 61_[+1]_51 chr3L:9358868-9358988 1.4e-05 68_[+1]_44 chr3R:7913252-7913372 1.4e-05 34_[+1]_78 chrX:8900218-8900338 1.4e-05 39_[+1]_73 chr3R:28544770-28544890 1.4e-05 44_[+1]_68 chr3R:10048815-10048935 1.4e-05 39_[+1]_73 chr2R:7463437-7463557 1.4e-05 71_[+1]_41 chr2R:21025055-21025175 1.4e-05 55_[+1]_57 chr3R:10045478-10045598 1.4e-05 42_[+1]_70 chr2R:23553950-23554070 1.4e-05 2_[+1]_110 chr3L:5146016-5146136 1.4e-05 109_[+1]_3 chr3R:18667807-18667927 1.4e-05 69_[+1]_43 chrX:8906938-8907058 1.4e-05 87_[+1]_25 chr3R:13710787-13710907 1.4e-05 90_[+1]_22 chr2L:13367547-13367667 1.4e-05 78_[+1]_34 chrX:15139742-15139862 1.4e-05 51_[+1]_61 chr3R:11626788-11626908 1.4e-05 80_[+1]_32 chr3L:11691574-11691694 1.4e-05 79_[+1]_33 chr2L:16879394-16879514 1.4e-05 87_[+1]_25 chr2L:3711695-3711815 1.4e-05 24_[+1]_88 chr2R:13439015-13439135 1.4e-05 79_[+1]_33 chr2R:17518128-17518248 1.4e-05 50_[+1]_62 chr3L:18667287-18667407 1.4e-05 75_[+1]_37 chr3R:20592595-20592715 1.4e-05 80_[+1]_32 chr3L:4193877-4193997 1.4e-05 94_[+1]_18 chr2R:18426351-18426471 1.4e-05 56_[+1]_56 chr3R:11407900-11408020 1.4e-05 40_[+1]_72 chr3L:1964340-1964460 1.4e-05 45_[+1]_67 chr3R:10885456-10885576 1.4e-05 47_[+1]_65 chr2L:16286138-16286258 1.4e-05 45_[+1]_67 chr2R:18613002-18613122 1.4e-05 32_[+1]_80 chrX:17423431-17423551 1.4e-05 95_[+1]_17 chr2R:20278900-20279020 1.4e-05 36_[+1]_76 chr2L:2575030-2575150 1.4e-05 28_[+1]_84 chr2L:11120247-11120367 1.4e-05 58_[+1]_54 chr2L:5096320-5096440 1.4e-05 48_[+1]_64 chr2R:18658176-18658296 1.4e-05 106_[+1]_6 chrX:10596057-10596177 1.4e-05 88_[+1]_24 chr3R:30459198-30459318 1.4e-05 46_[+1]_66 chr3L:20129096-20129216 1.4e-05 84_[+1]_28 chr3L:3376689-3376809 1.4e-05 51_[+1]_61 chr2R:23402249-23402369 1.4e-05 47_[+1]_65 chrX:10220047-10220167 1.4e-05 48_[+1]_64 chr3R:30180113-30180233 1.4e-05 85_[+1]_27 chrX:546583-546703 1.4e-05 17_[+1]_95 chr3L:15509525-15509645 1.4e-05 85_[+1]_27 chrX:5695176-5695296 1.4e-05 52_[+1]_60 chr2L:12020888-12021008 1.4e-05 69_[+1]_43 chr2R:24664333-24664453 1.4e-05 100_[+1]_12 chr2L:4949735-4949855 1.4e-05 40_[+1]_72 chr3L:690449-690569 1.4e-05 74_[+1]_38 chr2R:16143083-16143203 1.4e-05 56_[+1]_56 chr2R:19390057-19390177 1.4e-05 46_[+1]_66 chr2L:10728914-10729034 1.4e-05 58_[+1]_54 chr2L:18606803-18606923 1.4e-05 58_[+1]_54 chr2R:16142096-16142216 1.4e-05 89_[+1]_23 chr3R:13699467-13699587 1.4e-05 73_[+1]_39 chr3L:17035590-17035710 1.4e-05 71_[+1]_41 chr3L:2782125-2782245 1.4e-05 96_[+1]_16 chr3R:30177622-30177742 1.4e-05 60_[+1]_52 chr2R:13206656-13206776 1.4e-05 72_[+1]_40 chr3R:20831111-20831231 1.4e-05 29_[+1]_83 chr3R:30425151-30425271 1.4e-05 49_[+1]_63 chr3R:8303995-8304115 1.4e-05 22_[+1]_90 chr2R:13220149-13220269 1.4e-05 90_[+1]_22 chr2R:12423485-12423605 1.4e-05 68_[+1]_44 chr3L:16233071-16233191 1.4e-05 44_[+1]_68 chr3R:11749549-11749669 1.4e-05 106_[+1]_6 chr2L:1502846-1502966 1.4e-05 84_[+1]_28 chr3R:21878641-21878761 1.4e-05 40_[+1]_72 chr2L:10743895-10744015 1.4e-05 11_[+1]_101 chrX:20426965-20427085 1.4e-05 77_[+1]_35 chr3R:11231822-11231942 1.4e-05 57_[+1]_55 chr3R:9754601-9754721 1.4e-05 55_[+1]_57 chr2L:13182580-13182700 1.4e-05 19_[+1]_93 chr3R:15786632-15786752 1.4e-05 54_[+1]_58 chr2R:23560457-23560577 1.4e-05 51_[+1]_61 chr2L:12048889-12049009 1.4e-05 47_[+1]_65 chr2L:4465101-4465221 1.4e-05 66_[+1]_46 chr2R:12321158-12321278 1.4e-05 66_[+1]_46 chr3R:16614345-16614465 2.7e-05 37_[+1]_75 chr3L:1884842-1884962 2.7e-05 70_[+1]_42 chr2R:7539695-7539815 2.7e-05 27_[+1]_85 chr2R:10110867-10110987 2.7e-05 21_[+1]_91 chr3L:8297039-8297159 2.7e-05 110_[+1]_2 chr2R:24574461-24574581 2.7e-05 102_[+1]_10 chr2L:14348759-14348879 2.7e-05 17_[+1]_95 chr3L:8178309-8178429 2.7e-05 92_[+1]_20 chr2L:18677122-18677242 2.7e-05 42_[+1]_70 chr2R:21312656-21312776 2.7e-05 6_[+1]_106 chr3R:28696160-28696280 2.7e-05 82_[+1]_30 chr2R:10421311-10421431 2.7e-05 101_[+1]_11 chr3L:6082685-6082805 2.7e-05 9_[+1]_103 chr3L:2980928-2981048 2.7e-05 70_[+1]_42 chrX:9159891-9160011 2.7e-05 61_[+1]_51 chr3L:3060150-3060270 2.7e-05 86_[+1]_26 chr3L:8634034-8634154 2.7e-05 53_[+1]_59 chr3L:9679069-9679189 2.7e-05 38_[+1]_74 chr3L:20769487-20769607 2.7e-05 17_[+1]_95 chr2L:18943882-18944002 2.7e-05 48_[+1]_64 chr2L:4198025-4198145 2.7e-05 39_[+1]_73 chr2L:10342598-10342718 2.7e-05 10_[+1]_102 chr3L:21529287-21529407 2.7e-05 10_[+1]_102 chr2R:11982826-11982946 2.7e-05 103_[+1]_9 chr3R:27116657-27116777 2.7e-05 82_[+1]_30 chr2L:5528026-5528146 2.7e-05 45_[+1]_67 chr3L:18112910-18113030 2.7e-05 30_[+1]_82 chrX:254849-254969 2.7e-05 43_[+1]_69 chr3R:22468074-22468194 2.7e-05 62_[+1]_50 chr2L:4818192-4818312 2.7e-05 21_[+1]_91 chr2R:24195431-24195551 2.7e-05 26_[+1]_86 chr3L:6958048-6958168 2.7e-05 46_[+1]_66 chr3R:11236152-11236272 2.7e-05 95_[+1]_17 chrX:19618464-19618584 2.7e-05 51_[+1]_61 chr3L:12267455-12267575 2.7e-05 76_[+1]_36 chr2R:24661478-24661598 2.7e-05 34_[+1]_78 chr2R:12138691-12138811 2.7e-05 71_[+1]_41 chr2R:24783468-24783588 2.7e-05 22_[+1]_90 chr2L:7013276-7013396 2.7e-05 105_[+1]_7 chr3R:26058223-26058343 2.7e-05 60_[+1]_52 chr2R:20870700-20870820 2.7e-05 109_[+1]_3 chr3R:24918427-24918547 2.7e-05 40_[+1]_72 chr3R:18980945-18981065 2.7e-05 57_[+1]_55 chr3R:25335193-25335313 2.7e-05 74_[+1]_38 chr3L:2780791-2780911 2.7e-05 95_[+1]_17 chr2R:24668282-24668402 2.7e-05 57_[+1]_55 chr3R:22613667-22613787 2.7e-05 34_[+1]_78 chrX:3936266-3936386 2.7e-05 3_[+1]_109 chr3R:7902645-7902765 2.7e-05 76_[+1]_36 chr2R:12425516-12425636 3.7e-05 55_[+1]_57 chrX:8121079-8121199 3.7e-05 55_[+1]_57 chr3R:24148886-24149006 3.7e-05 62_[+1]_50 chr3R:19027316-19027436 3.7e-05 53_[+1]_59 chr3L:17849673-17849793 3.7e-05 26_[+1]_86 chr3R:10815183-10815303 3.7e-05 58_[+1]_54 chr2L:19530272-19530392 3.7e-05 15_[+1]_97 chr3R:25594292-25594412 3.7e-05 85_[+1]_27 chr2L:1752097-1752217 4.7e-05 30_[+1]_82 chrX:1460601-1460721 4.7e-05 52_[+1]_60 chr2R:13485298-13485418 4.7e-05 72_[+1]_40 chr3R:24659564-24659684 4.7e-05 69_[+1]_43 chr2L:21397290-21397410 4.7e-05 59_[+1]_53 chr2L:6036853-6036973 4.7e-05 3_[+1]_109 chr3L:20361561-20361681 4.7e-05 33_[+1]_79 chr2R:17781889-17782009 4.7e-05 14_[+1]_98 chr3R:23995649-23995769 4.7e-05 32_[+1]_80 chr3R:14259916-14260036 4.7e-05 74_[+1]_38 chrX:14201301-14201421 4.7e-05 61_[+1]_51 chr2L:4794564-4794684 4.7e-05 44_[+1]_68 chr3R:5463294-5463414 5.6e-05 100_[+1]_12 chr2L:8521829-8521949 5.6e-05 60_[+1]_52 chr3R:14890156-14890276 5.6e-05 62_[+1]_50 chr3R:10708278-10708398 5.6e-05 62_[+1]_50 chr3L:8954421-8954541 5.6e-05 78_[+1]_34 chr3R:14513578-14513698 5.6e-05 45_[+1]_67 chrX:15697410-15697530 5.6e-05 53_[+1]_59 chr2R:23693920-23694040 5.6e-05 72_[+1]_40 chr3L:834048-834168 5.6e-05 69_[+1]_43 chr3R:5563621-5563741 5.6e-05 8_[+1]_104 chrX:12901042-12901162 5.6e-05 79_[+1]_33 chr2R:16957424-16957544 5.6e-05 51_[+1]_61 chr2R:13239394-13239514 7.5e-05 56_[+1]_56 chrX:8251685-8251805 7.5e-05 15_[+1]_97 chr3L:4286962-4287082 7.5e-05 90_[+1]_22 chr2L:10009858-10009978 7.5e-05 87_[+1]_25 chr2L:16287344-16287464 7.5e-05 7_[+1]_105 chr2L:2979243-2979363 7.5e-05 37_[+1]_75 chr2L:8196826-8196946 7.5e-05 71_[+1]_41 chr2L:15005627-15005747 7.5e-05 112_[+1] chr2L:20922908-20923028 7.5e-05 11_[+1]_101 chr3L:19845201-19845321 7.5e-05 54_[+1]_58 chr2L:13179195-13179315 7.5e-05 51_[+1]_61 chr3R:7246954-7247074 8.5e-05 36_[+1]_76 chr3R:14879358-14879478 8.5e-05 77_[+1]_35 chrX:1375408-1375528 8.5e-05 107_[+1]_5 chr2L:5100113-5100233 9.2e-05 101_[+1]_11 chr3R:26876572-26876692 9.2e-05 44_[+1]_68 chr3R:17733489-17733609 9.2e-05 105_[+1]_7 chr3R:11230488-11230608 9.2e-05 66_[+1]_46 chrX:2180759-2180879 9.2e-05 95_[+1]_17 chr3R:19641197-19641317 9.9e-05 48_[+1]_64 chrX:8152813-8152933 9.9e-05 92_[+1]_20 chrX:7967246-7967366 0.00011 58_[+1]_54 chr3L:15163578-15163698 0.00013 45_[+1]_67 chr3L:1798695-1798815 0.00016 50_[+1]_62 chr3L:16100158-16100278 0.00016 105_[+1]_7 chr2L:16327016-16327136 0.00018 18_[+1]_94 chrX:3936466-3936586 0.00018 3_[+1]_109 chr2L:3319817-3319937 0.00023 69_[+1]_43 chr2R:12692691-12692811 0.00033 34_[+1]_78 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCTGWT width=8 seqs=207 chr2L:12436363-12436483 ( 59) CAGCTGTT 1 chr3L:11815345-11815465 ( 106) CAGCTGTT 1 chr2L:19114316-19114436 ( 64) CAGCTGTT 1 chr3R:26863337-26863457 ( 69) CAGCTGTT 1 chr3R:9456524-9456644 ( 28) CAGCTGTT 1 chr2L:21154024-21154144 ( 34) CAGCTGTT 1 chr2L:4973907-4974027 ( 84) CAGCTGTT 1 chr2R:22637681-22637801 ( 7) CAGCTGTT 1 chr2R:9145194-9145314 ( 74) CAGCTGTT 1 chrX:6661406-6661526 ( 84) CAGCTGTT 1 chrX:1342010-1342130 ( 103) CAGCTGTT 1 chr3R:15933821-15933941 ( 42) CAGCTGTT 1 chr3L:16419302-16419422 ( 28) CAGCTGTT 1 chr2R:14860713-14860833 ( 49) CAGCTGTT 1 chr3R:29723109-29723229 ( 51) CAGCTGTT 1 chr3L:5136324-5136444 ( 55) CAGCTGTT 1 chr2L:9911917-9912037 ( 87) CAGCTGTT 1 chr3L:10886057-10886177 ( 62) CAGCTGTT 1 chr3L:9358868-9358988 ( 69) CAGCTGTT 1 chr3R:7913252-7913372 ( 35) CAGCTGTT 1 chrX:8900218-8900338 ( 40) CAGCTGTT 1 chr3R:28544770-28544890 ( 45) CAGCTGTT 1 chr3R:10048815-10048935 ( 40) CAGCTGTT 1 chr2R:7463437-7463557 ( 72) CAGCTGTT 1 chr2R:21025055-21025175 ( 56) CAGCTGTT 1 chr3R:10045478-10045598 ( 43) CAGCTGTT 1 chr2R:23553950-23554070 ( 3) CAGCTGTT 1 chr3L:5146016-5146136 ( 110) CAGCTGTT 1 chr3R:18667807-18667927 ( 70) CAGCTGTT 1 chrX:8906938-8907058 ( 88) CAGCTGTT 1 chr3R:13710787-13710907 ( 91) CAGCTGTT 1 chr2L:13367547-13367667 ( 79) CAGCTGTT 1 chrX:15139742-15139862 ( 52) CAGCTGTT 1 chr3R:11626788-11626908 ( 81) CAGCTGTT 1 chr3L:11691574-11691694 ( 80) CAGCTGTT 1 chr2L:16879394-16879514 ( 88) CAGCTGTT 1 chr2L:3711695-3711815 ( 25) CAGCTGTT 1 chr2R:13439015-13439135 ( 80) CAGCTGTT 1 chr2R:17518128-17518248 ( 51) CAGCTGTT 1 chr3L:18667287-18667407 ( 76) CAGCTGTT 1 chr3R:20592595-20592715 ( 81) CAGCTGTT 1 chr3L:4193877-4193997 ( 95) CAGCTGTT 1 chr2R:18426351-18426471 ( 57) CAGCTGTT 1 chr3R:11407900-11408020 ( 41) CAGCTGTT 1 chr3L:1964340-1964460 ( 46) CAGCTGTT 1 chr3R:10885456-10885576 ( 48) CAGCTGTT 1 chr2L:16286138-16286258 ( 46) CAGCTGTT 1 chr2R:18613002-18613122 ( 33) CAGCTGTT 1 chrX:17423431-17423551 ( 96) CAGCTGTT 1 chr2R:20278900-20279020 ( 37) CAGCTGTT 1 chr2L:2575030-2575150 ( 29) CAGCTGTT 1 chr2L:11120247-11120367 ( 59) CAGCTGTT 1 chr2L:5096320-5096440 ( 49) CAGCTGTT 1 chr2R:18658176-18658296 ( 107) CAGCTGTT 1 chrX:10596057-10596177 ( 89) CAGCTGTT 1 chr3R:30459198-30459318 ( 47) CAGCTGTT 1 chr3L:20129096-20129216 ( 85) CAGCTGTT 1 chr3L:3376689-3376809 ( 52) CAGCTGTT 1 chr2R:23402249-23402369 ( 48) CAGCTGTT 1 chrX:10220047-10220167 ( 49) CAGCTGTT 1 chr3R:30180113-30180233 ( 86) CAGCTGTT 1 chrX:546583-546703 ( 18) CAGCTGTT 1 chr3L:15509525-15509645 ( 86) CAGCTGTT 1 chrX:5695176-5695296 ( 53) CAGCTGTT 1 chr2L:12020888-12021008 ( 70) CAGCTGTT 1 chr2R:24664333-24664453 ( 101) CAGCTGTT 1 chr2L:4949735-4949855 ( 41) CAGCTGTT 1 chr3L:690449-690569 ( 75) CAGCTGTT 1 chr2R:16143083-16143203 ( 57) CAGCTGTT 1 chr2R:19390057-19390177 ( 47) CAGCTGTT 1 chr2L:10728914-10729034 ( 59) CAGCTGTT 1 chr2L:18606803-18606923 ( 59) CAGCTGTT 1 chr2R:16142096-16142216 ( 90) CAGCTGTT 1 chr3R:13699467-13699587 ( 74) CAGCTGTT 1 chr3L:17035590-17035710 ( 72) CAGCTGTT 1 chr3L:2782125-2782245 ( 97) CAGCTGTT 1 chr3R:30177622-30177742 ( 61) CAGCTGTT 1 chr2R:13206656-13206776 ( 73) CAGCTGTT 1 chr3R:20831111-20831231 ( 30) CAGCTGTT 1 chr3R:30425151-30425271 ( 50) CAGCTGTT 1 chr3R:8303995-8304115 ( 23) CAGCTGTT 1 chr2R:13220149-13220269 ( 91) CAGCTGTT 1 chr2R:12423485-12423605 ( 69) CAGCTGTT 1 chr3L:16233071-16233191 ( 45) CAGCTGTT 1 chr3R:11749549-11749669 ( 107) CAGCTGTT 1 chr2L:1502846-1502966 ( 85) CAGCTGTT 1 chr3R:21878641-21878761 ( 41) CAGCTGTT 1 chr2L:10743895-10744015 ( 12) CAGCTGTT 1 chrX:20426965-20427085 ( 78) CAGCTGTT 1 chr3R:11231822-11231942 ( 58) CAGCTGTT 1 chr3R:9754601-9754721 ( 56) CAGCTGTT 1 chr2L:13182580-13182700 ( 20) CAGCTGTT 1 chr3R:15786632-15786752 ( 55) CAGCTGTT 1 chr2R:23560457-23560577 ( 52) CAGCTGTT 1 chr2L:12048889-12049009 ( 48) CAGCTGTT 1 chr2L:4465101-4465221 ( 67) CAGCTGTT 1 chr2R:12321158-12321278 ( 67) CAGCTGTT 1 chr3R:16614345-16614465 ( 38) CAGCTGAT 1 chr3L:1884842-1884962 ( 71) CAGCTGAT 1 chr2R:7539695-7539815 ( 28) CAGCTGAT 1 chr2R:10110867-10110987 ( 22) CAGCTGAT 1 chr3L:8297039-8297159 ( 111) CAGCTGAT 1 chr2R:24574461-24574581 ( 103) CAGCTGAT 1 chr2L:14348759-14348879 ( 18) CAGCTGAT 1 chr3L:8178309-8178429 ( 93) CAGCTGAT 1 chr2L:18677122-18677242 ( 43) CAGCTGAT 1 chr2R:21312656-21312776 ( 7) CAGCTGAT 1 chr3R:28696160-28696280 ( 83) CAGCTGAT 1 chr2R:10421311-10421431 ( 102) CAGCTGAT 1 chr3L:6082685-6082805 ( 10) CAGCTGAT 1 chr3L:2980928-2981048 ( 71) CAGCTGAT 1 chrX:9159891-9160011 ( 62) CAGCTGAT 1 chr3L:3060150-3060270 ( 87) CAGCTGAT 1 chr3L:8634034-8634154 ( 54) CAGCTGAT 1 chr3L:9679069-9679189 ( 39) CAGCTGAT 1 chr3L:20769487-20769607 ( 18) CAGCTGAT 1 chr2L:18943882-18944002 ( 49) CAGCTGAT 1 chr2L:4198025-4198145 ( 40) CAGCTGAT 1 chr2L:10342598-10342718 ( 11) CAGCTGAT 1 chr3L:21529287-21529407 ( 11) CAGCTGAT 1 chr2R:11982826-11982946 ( 104) CAGCTGAT 1 chr3R:27116657-27116777 ( 83) CAGCTGAT 1 chr2L:5528026-5528146 ( 46) CAGCTGAT 1 chr3L:18112910-18113030 ( 31) CAGCTGAT 1 chrX:254849-254969 ( 44) CAGCTGAT 1 chr3R:22468074-22468194 ( 63) CAGCTGAT 1 chr2L:4818192-4818312 ( 22) CAGCTGAT 1 chr2R:24195431-24195551 ( 27) CAGCTGAT 1 chr3L:6958048-6958168 ( 47) CAGCTGAT 1 chr3R:11236152-11236272 ( 96) CAGCTGAT 1 chrX:19618464-19618584 ( 52) CAGCTGAT 1 chr3L:12267455-12267575 ( 77) CAGCTGAT 1 chr2R:24661478-24661598 ( 35) CAGCTGAT 1 chr2R:12138691-12138811 ( 72) CAGCTGAT 1 chr2R:24783468-24783588 ( 23) CAGCTGAT 1 chr2L:7013276-7013396 ( 106) CAGCTGAT 1 chr3R:26058223-26058343 ( 61) CAGCTGAT 1 chr2R:20870700-20870820 ( 110) CAGCTGAT 1 chr3R:24918427-24918547 ( 41) CAGCTGAT 1 chr3R:18980945-18981065 ( 58) CAGCTGAT 1 chr3R:25335193-25335313 ( 75) CAGCTGAT 1 chr3L:2780791-2780911 ( 96) CAGCTGAT 1 chr2R:24668282-24668402 ( 58) CAGCTGAT 1 chr3R:22613667-22613787 ( 35) CAGCTGAT 1 chrX:3936266-3936386 ( 4) CAGCTGAT 1 chr3R:7902645-7902765 ( 77) CAGCTGAT 1 chr2R:12425516-12425636 ( 56) CAGCTGTC 1 chrX:8121079-8121199 ( 56) CAGCTGTC 1 chr3R:24148886-24149006 ( 63) CAGCTGTC 1 chr3R:19027316-19027436 ( 54) CAGCTGTC 1 chr3L:17849673-17849793 ( 27) CAGCTGTC 1 chr3R:10815183-10815303 ( 59) CAGCTGTC 1 chr2L:19530272-19530392 ( 16) CAGCTGTC 1 chr3R:25594292-25594412 ( 86) CAGCTGTC 1 chr2L:1752097-1752217 ( 31) CAGCTGTG 1 chrX:1460601-1460721 ( 53) CAGCTGTG 1 chr2R:13485298-13485418 ( 73) CAGCTGTG 1 chr3R:24659564-24659684 ( 70) CAGCTGTG 1 chr2L:21397290-21397410 ( 60) CAGCTGTG 1 chr2L:6036853-6036973 ( 4) CAGCTGTG 1 chr3L:20361561-20361681 ( 34) CAGCTGTG 1 chr2R:17781889-17782009 ( 15) CAGCTGTG 1 chr3R:23995649-23995769 ( 33) CAGCTGTG 1 chr3R:14259916-14260036 ( 75) CAGCTGTG 1 chrX:14201301-14201421 ( 62) CAGCTGTG 1 chr2L:4794564-4794684 ( 45) CAGCTGTG 1 chr3R:5463294-5463414 ( 101) CAGCTGAC 1 chr2L:8521829-8521949 ( 61) CAGCTGAC 1 chr3R:14890156-14890276 ( 63) CAGCTGAC 1 chr3R:10708278-10708398 ( 63) CAGCTGAC 1 chr3L:8954421-8954541 ( 79) CAGCTGAC 1 chr3R:14513578-14513698 ( 46) CAGCTGAC 1 chrX:15697410-15697530 ( 54) CAGCTGAC 1 chr2R:23693920-23694040 ( 73) CAGCTGAC 1 chr3L:834048-834168 ( 70) CAGCTGAC 1 chr3R:5563621-5563741 ( 9) CAGCTGAC 1 chrX:12901042-12901162 ( 80) CAGCTGAC 1 chr2R:16957424-16957544 ( 52) CAGCTGAC 1 chr2R:13239394-13239514 ( 57) CAGCTGAG 1 chrX:8251685-8251805 ( 16) CAGCTGGT 1 chr3L:4286962-4287082 ( 91) CAGCTGAG 1 chr2L:10009858-10009978 ( 88) CAGCTGAG 1 chr2L:16287344-16287464 ( 8) CAGCTGGT 1 chr2L:2979243-2979363 ( 38) CAGCTGAG 1 chr2L:8196826-8196946 ( 72) CAGCTGAG 1 chr2L:15005627-15005747 ( 113) CAGCTGGT 1 chr2L:20922908-20923028 ( 12) CAGCTGAG 1 chr3L:19845201-19845321 ( 55) CAGCTGAG 1 chr2L:13179195-13179315 ( 52) CAGCTGAG 1 chr3R:7246954-7247074 ( 37) CAGCTGCT 1 chr3R:14879358-14879478 ( 78) CAGCTGCT 1 chrX:1375408-1375528 ( 108) CAGCTGCT 1 chr2L:5100113-5100233 ( 102) CAGCTGGC 1 chr3R:26876572-26876692 ( 45) CAGCTGGC 1 chr3R:17733489-17733609 ( 106) CAGCTGGC 1 chr3R:11230488-11230608 ( 67) CAGCTGGC 1 chrX:2180759-2180879 ( 96) CAGCTGGC 1 chr3R:19641197-19641317 ( 49) CAGCTGGG 1 chrX:8152813-8152933 ( 93) CAGCTGGG 1 chrX:7967246-7967366 ( 59) CAGCTGCC 1 chr3L:15163578-15163698 ( 46) CAGATGTT 1 chr3L:1798695-1798815 ( 51) CAACTGTT 1 chr3L:16100158-16100278 ( 106) CGGCTGTT 1 chr2L:16327016-16327136 ( 19) CAGATGAT 1 chrX:3936466-3936586 ( 4) CAGATGAT 1 chr2L:3319817-3319937 ( 70) CATCTGTT 1 chr2R:12692691-12692811 ( 35) CAACTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.20458 E= 1.8e-357 -1434 227 -1434 -1434 177 -1434 -543 -1434 -491 -1434 224 -592 -433 225 -1434 -1434 -1434 -1434 -1434 177 -1434 -1434 226 -1434 24 -342 -211 100 -1434 -72 -91 138 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 207 E= 1.8e-357 0.000000 1.000000 0.000000 0.000000 0.995169 0.000000 0.004831 0.000000 0.009662 0.000000 0.985507 0.004831 0.014493 0.985507 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.342995 0.019324 0.048309 0.589372 0.000000 0.125604 0.111111 0.763285 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-1 regular expression -------------------------------------------------------------------------------- CAGCTG[TA]T -------------------------------------------------------------------------------- Time 6.88 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-2 width = 8 sites = 65 llr = 577 E-value = 1.6e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 19:::a:9 pos.-specific C :::a:::: probability G ::::a::1 matrix T 8:a:::a: bits 2.3 ** 2.0 ** 1.8 *** 1.6 ***** Relative 1.4 ****** Entropy 1.1 ******** (12.8 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:11815345-11815465 42 2.70e-05 AGTTAGTAAC TATCGATA AGTCAGCGAT chr3R:16614345-16614465 79 2.70e-05 ATACTATATA TATCGATA GTTGGCTCTA chr3R:9456524-9456644 61 2.70e-05 TGTGCCGAAC TATCGATA GGTTCCCTAC chr3L:8297039-8297159 83 2.70e-05 TTTACCCCTA TATCGATA GGTCAACTAT chr2R:22637681-22637801 53 2.70e-05 TGTCAAGGCC TATCGATA AGAAATCGAT chrX:6661406-6661526 42 2.70e-05 ATTGGTTTCT TATCGATA ACTGAAGAAA chrX:1342010-1342130 68 2.70e-05 GCGATGATTG TATCGATA GTATCGAGTG chr3R:15933821-15933941 2 2.70e-05 A TATCGATA GCTAATTATG chr2L:1752097-1752217 54 2.70e-05 CGCAGCGATA TATCGATA TGTGTCTGTC chr3L:711846-711966 30 2.70e-05 GATTTTTCTC TATCGATA ACTATCGAAA chr3R:26876572-26876692 9 2.70e-05 TAACCATC TATCGATA GTTTCCGCCA chr3R:10708278-10708398 97 2.70e-05 AGTATGTACC TATCGATA TATCGGTGGA chr2L:3319817-3319937 111 2.70e-05 CTGGTATCGT TATCGATA TA chr3R:10045478-10045598 59 2.70e-05 TTCGTTATGC TATCGATA AGTTATTGGG chrX:9159891-9160011 88 2.70e-05 GCCTGCTGGC TATCGATA CTCGCTATCG chr2R:22483217-22483337 89 2.70e-05 GCCGACTGTC TATCGATA ACAGTGCGTA chr2L:16879394-16879514 30 2.70e-05 GTGAGCTAAC TATCGATA TATCCATTAG chr3L:8954421-8954541 54 2.70e-05 CAAGCAAAGT TATCGATA TACCACAATA chr3R:24659564-24659684 3 2.70e-05 GT TATCGATA AGTTGATTTT chr2R:18613002-18613122 62 2.70e-05 GCTTGGCACT TATCGATA ACCTATTTCA chr2L:10342598-10342718 67 2.70e-05 ATACTAGGAA TATCGATA AGTGTTGAAG chr2L:11120247-11120367 77 2.70e-05 TGTCTTATGC TATCGATA GCGCCGACTT chr3R:30459198-30459318 106 2.70e-05 ATCGACGTCC TATCGATA CTAATCG chrX:1375408-1375528 57 2.70e-05 GGCCGCCACT TATCGATA GCCACTGGAA chr2R:23693920-23694040 15 2.70e-05 ACCGCCCCGT TATCGATA TCAGCTGCAA chr3L:20361561-20361681 50 2.70e-05 TGTCAGTTGT TATCGATA GTTTTCTGCT chrX:5695176-5695296 26 2.70e-05 TTTTGTTGAC TATCGATA TTGGCCAGGT chr2R:24664333-24664453 48 2.70e-05 ACGGCTACAC TATCGATA TAAATTGTTA chr3L:690449-690569 19 2.70e-05 AATTATCGGT TATCGATA GCGTTCAAAT chr3L:17035590-17035710 40 2.70e-05 GCATTACAGT TATCGATA TGATCTACTT chr2R:13206656-13206776 32 2.70e-05 TGCTGCTGGA TATCGATA TCCACTATCA chr3R:30425151-30425271 66 2.70e-05 TTCTCTTCGA TATCGATA ACACGCGAAA chrX:2180759-2180879 73 2.70e-05 TGCTTATCGC TATCGATA ACAGCAAACT chr2L:10743895-10744015 69 2.70e-05 TCTTAAATGA TATCGATA GCGATGCTTC chr3R:22613667-22613787 12 2.70e-05 TAGCGCCACT TATCGATA ACTATAAAAA chr2R:12321158-12321278 25 2.70e-05 CGGCTTGAAT TATCGATA ACTCCAGCCG chr3R:10048815-10048935 50 7.29e-05 CAGCTGTTTC TATCGATG AGTTGAAAAA chr3L:1798695-1798815 77 7.29e-05 GTCGATTGCT TATCGATG CACAACGCAG chr3L:2980928-2981048 32 7.29e-05 GTAAGGTAAC TATCGATG ACGGCGATCA chr3L:9679069-9679189 82 7.29e-05 GAAACTTGCC AATCGATA GGCGATTGTA chr2L:18943882-18944002 98 7.29e-05 GTCATTGGGT AATCGATA GAAGCTAAAC chr3R:27116657-27116777 53 7.29e-05 TAGCCTACCC AATCGATA GTAGCCGCTC chr2L:5528026-5528146 5 7.29e-05 TTAA AATCGATA ACAAACGATA chr3L:3376689-3376809 31 7.29e-05 CACGATTACC AATCGATA GAATAGTCGC chr2L:6048601-6048721 109 7.29e-05 CGCACCCAGC AATCGATA ACCG chr2L:10728914-10729034 26 7.29e-05 GAATATATGA TATCGATG TTTGCAATCG chr3R:21878641-21878761 53 7.29e-05 GCTGTTCTGC AATCGATA ATCGACATAC chrX:2344576-2344696 112 7.29e-05 ACAGCGCAGT TATCGATG T chr3R:18667807-18667927 27 9.22e-05 TTTTTCTGCT TGTCGATA AGCACTCGTT chr3R:11626788-11626908 66 9.22e-05 TTATCGATTT TGTCGATA ATAAAACCAG chrX:10220047-10220167 7 9.22e-05 ATCGAT TGTCGATA GGCGCCGATA chr2L:21154024-21154144 7 1.92e-04 TAACGT TTTCGATA ACGTATCCCA chrX:1460601-1460721 77 1.92e-04 AGTCGAAAGA TATCGAAA ACAGTGCTGC chr2L:14348759-14348879 94 1.92e-04 CTCAAACAAT TATCGTTA TCGGTTTTGA chr2L:3711695-3711815 52 1.92e-04 AGTTGCCAAC TATCGTTA TCAAAGTGAT chr2R:13485298-13485418 98 1.92e-04 GATGGGAATT GATCGATA CCTGTATAGT chr3R:10885456-10885576 84 1.92e-04 CTCTCACGGT TATCGAAA GAGAGCTGCA chrX:254849-254969 32 1.92e-04 TACACTAAGT TATCGAAA CGAACAGCTG chr3R:9756309-9756429 82 1.92e-04 GATTAAGCCC GATCGATA TATAAAAATT chr2L:12020888-12021008 6 1.92e-04 GGGTG TTTCGATA ATTTTTTCTT chr3R:18980945-18981065 43 1.92e-04 AGCTGACCGT TATCGTTA TCGCCGACAG chr3R:11749549-11749669 38 1.92e-04 ATATTGAATG TTTCGATA CTATTGACTT chr2L:12063201-12063321 37 2.20e-04 ATGTATCGAT TATCGATT ATGTATCGAT chr2R:16142096-16142216 76 2.20e-04 TCAATCGATC TATCGATT AACAGTCAGC chr2R:17781889-17782009 76 2.39e-04 CGAAAGTGCC AATCGATG TGTACTCGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:11815345-11815465 2.7e-05 41_[+2]_71 chr3R:16614345-16614465 2.7e-05 78_[+2]_34 chr3R:9456524-9456644 2.7e-05 60_[+2]_52 chr3L:8297039-8297159 2.7e-05 82_[+2]_30 chr2R:22637681-22637801 2.7e-05 52_[+2]_60 chrX:6661406-6661526 2.7e-05 41_[+2]_71 chrX:1342010-1342130 2.7e-05 67_[+2]_45 chr3R:15933821-15933941 2.7e-05 1_[+2]_111 chr2L:1752097-1752217 2.7e-05 53_[+2]_59 chr3L:711846-711966 2.7e-05 29_[+2]_83 chr3R:26876572-26876692 2.7e-05 8_[+2]_104 chr3R:10708278-10708398 2.7e-05 96_[+2]_16 chr2L:3319817-3319937 2.7e-05 110_[+2]_2 chr3R:10045478-10045598 2.7e-05 58_[+2]_54 chrX:9159891-9160011 2.7e-05 87_[+2]_25 chr2R:22483217-22483337 2.7e-05 88_[+2]_24 chr2L:16879394-16879514 2.7e-05 29_[+2]_83 chr3L:8954421-8954541 2.7e-05 53_[+2]_59 chr3R:24659564-24659684 2.7e-05 2_[+2]_110 chr2R:18613002-18613122 2.7e-05 61_[+2]_51 chr2L:10342598-10342718 2.7e-05 66_[+2]_46 chr2L:11120247-11120367 2.7e-05 76_[+2]_36 chr3R:30459198-30459318 2.7e-05 105_[+2]_7 chrX:1375408-1375528 2.7e-05 56_[+2]_56 chr2R:23693920-23694040 2.7e-05 14_[+2]_98 chr3L:20361561-20361681 2.7e-05 49_[+2]_63 chrX:5695176-5695296 2.7e-05 25_[+2]_87 chr2R:24664333-24664453 2.7e-05 47_[+2]_65 chr3L:690449-690569 2.7e-05 18_[+2]_94 chr3L:17035590-17035710 2.7e-05 39_[+2]_73 chr2R:13206656-13206776 2.7e-05 31_[+2]_81 chr3R:30425151-30425271 2.7e-05 65_[+2]_47 chrX:2180759-2180879 2.7e-05 72_[+2]_40 chr2L:10743895-10744015 2.7e-05 68_[+2]_44 chr3R:22613667-22613787 2.7e-05 11_[+2]_101 chr2R:12321158-12321278 2.7e-05 24_[+2]_88 chr3R:10048815-10048935 7.3e-05 49_[+2]_63 chr3L:1798695-1798815 7.3e-05 76_[+2]_36 chr3L:2980928-2981048 7.3e-05 31_[+2]_81 chr3L:9679069-9679189 7.3e-05 81_[+2]_31 chr2L:18943882-18944002 7.3e-05 97_[+2]_15 chr3R:27116657-27116777 7.3e-05 52_[+2]_60 chr2L:5528026-5528146 7.3e-05 4_[+2]_108 chr3L:3376689-3376809 7.3e-05 30_[+2]_82 chr2L:6048601-6048721 7.3e-05 108_[+2]_4 chr2L:10728914-10729034 7.3e-05 25_[+2]_87 chr3R:21878641-21878761 7.3e-05 52_[+2]_60 chrX:2344576-2344696 7.3e-05 111_[+2]_1 chr3R:18667807-18667927 9.2e-05 26_[+2]_86 chr3R:11626788-11626908 9.2e-05 65_[+2]_47 chrX:10220047-10220167 9.2e-05 6_[+2]_106 chr2L:21154024-21154144 0.00019 6_[+2]_106 chrX:1460601-1460721 0.00019 76_[+2]_36 chr2L:14348759-14348879 0.00019 93_[+2]_19 chr2L:3711695-3711815 0.00019 51_[+2]_61 chr2R:13485298-13485418 0.00019 97_[+2]_15 chr3R:10885456-10885576 0.00019 83_[+2]_29 chrX:254849-254969 0.00019 31_[+2]_81 chr3R:9756309-9756429 0.00019 81_[+2]_31 chr2L:12020888-12021008 0.00019 5_[+2]_107 chr3R:18980945-18981065 0.00019 42_[+2]_70 chr3R:11749549-11749669 0.00019 37_[+2]_75 chr2L:12063201-12063321 0.00022 36_[+2]_76 chr2R:16142096-16142216 0.00022 75_[+2]_37 chr2R:17781889-17782009 0.00024 75_[+2]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=65 chr3L:11815345-11815465 ( 42) TATCGATA 1 chr3R:16614345-16614465 ( 79) TATCGATA 1 chr3R:9456524-9456644 ( 61) TATCGATA 1 chr3L:8297039-8297159 ( 83) TATCGATA 1 chr2R:22637681-22637801 ( 53) TATCGATA 1 chrX:6661406-6661526 ( 42) TATCGATA 1 chrX:1342010-1342130 ( 68) TATCGATA 1 chr3R:15933821-15933941 ( 2) TATCGATA 1 chr2L:1752097-1752217 ( 54) TATCGATA 1 chr3L:711846-711966 ( 30) TATCGATA 1 chr3R:26876572-26876692 ( 9) TATCGATA 1 chr3R:10708278-10708398 ( 97) TATCGATA 1 chr2L:3319817-3319937 ( 111) TATCGATA 1 chr3R:10045478-10045598 ( 59) TATCGATA 1 chrX:9159891-9160011 ( 88) TATCGATA 1 chr2R:22483217-22483337 ( 89) TATCGATA 1 chr2L:16879394-16879514 ( 30) TATCGATA 1 chr3L:8954421-8954541 ( 54) TATCGATA 1 chr3R:24659564-24659684 ( 3) TATCGATA 1 chr2R:18613002-18613122 ( 62) TATCGATA 1 chr2L:10342598-10342718 ( 67) TATCGATA 1 chr2L:11120247-11120367 ( 77) TATCGATA 1 chr3R:30459198-30459318 ( 106) TATCGATA 1 chrX:1375408-1375528 ( 57) TATCGATA 1 chr2R:23693920-23694040 ( 15) TATCGATA 1 chr3L:20361561-20361681 ( 50) TATCGATA 1 chrX:5695176-5695296 ( 26) TATCGATA 1 chr2R:24664333-24664453 ( 48) TATCGATA 1 chr3L:690449-690569 ( 19) TATCGATA 1 chr3L:17035590-17035710 ( 40) TATCGATA 1 chr2R:13206656-13206776 ( 32) TATCGATA 1 chr3R:30425151-30425271 ( 66) TATCGATA 1 chrX:2180759-2180879 ( 73) TATCGATA 1 chr2L:10743895-10744015 ( 69) TATCGATA 1 chr3R:22613667-22613787 ( 12) TATCGATA 1 chr2R:12321158-12321278 ( 25) TATCGATA 1 chr3R:10048815-10048935 ( 50) TATCGATG 1 chr3L:1798695-1798815 ( 77) TATCGATG 1 chr3L:2980928-2981048 ( 32) TATCGATG 1 chr3L:9679069-9679189 ( 82) AATCGATA 1 chr2L:18943882-18944002 ( 98) AATCGATA 1 chr3R:27116657-27116777 ( 53) AATCGATA 1 chr2L:5528026-5528146 ( 5) AATCGATA 1 chr3L:3376689-3376809 ( 31) AATCGATA 1 chr2L:6048601-6048721 ( 109) AATCGATA 1 chr2L:10728914-10729034 ( 26) TATCGATG 1 chr3R:21878641-21878761 ( 53) AATCGATA 1 chrX:2344576-2344696 ( 112) TATCGATG 1 chr3R:18667807-18667927 ( 27) TGTCGATA 1 chr3R:11626788-11626908 ( 66) TGTCGATA 1 chrX:10220047-10220167 ( 7) TGTCGATA 1 chr2L:21154024-21154144 ( 7) TTTCGATA 1 chrX:1460601-1460721 ( 77) TATCGAAA 1 chr2L:14348759-14348879 ( 94) TATCGTTA 1 chr2L:3711695-3711815 ( 52) TATCGTTA 1 chr2R:13485298-13485418 ( 98) GATCGATA 1 chr3R:10885456-10885576 ( 84) TATCGAAA 1 chrX:254849-254969 ( 32) TATCGAAA 1 chr3R:9756309-9756429 ( 82) GATCGATA 1 chr2L:12020888-12021008 ( 6) TTTCGATA 1 chr3R:18980945-18981065 ( 43) TATCGTTA 1 chr3R:11749549-11749669 ( 38) TTTCGATA 1 chr2L:12063201-12063321 ( 37) TATCGATT 1 chr2R:16142096-16142216 ( 76) TATCGATT 1 chr2R:17781889-17782009 ( 76) AATCGATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.51346 E= 1.6e-037 -124 -1267 -276 152 164 -1267 -217 -267 -1267 -1267 -1267 177 -1267 227 -1267 -1267 -1267 -1267 226 -1267 171 -1267 -1267 -267 -266 -1267 -1267 170 159 -1267 -117 -325 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 65 E= 1.6e-037 0.123077 0.000000 0.030769 0.846154 0.907692 0.000000 0.046154 0.046154 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.953846 0.000000 0.000000 0.046154 0.046154 0.000000 0.000000 0.953846 0.876923 0.000000 0.092308 0.030769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 regular expression -------------------------------------------------------------------------------- TATCGATA -------------------------------------------------------------------------------- Time 12.72 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCNCTG MEME-3 width = 8 sites = 61 llr = 516 E-value = 3.2e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a2:3:1: pos.-specific C a::a3a1: probability G ::7:2::9 matrix T ::::2:81 bits 2.3 * * * 2.0 * * * 1.8 ** * * 1.6 ** * * * Relative 1.4 ** * * * Entropy 1.1 **** * * (12.2 bits) 0.9 **** *** 0.7 **** *** 0.5 **** *** 0.2 **** *** 0.0 -------- Multilevel CAGCACTG consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:21154024-21154144 59 6.80e-06 CAACACTTTC CAGCCCTG GAAAAATACC chr2R:7463437-7463557 59 6.80e-06 GAGCACCTGC CAGCCCTG GAAATCAGCT chr3R:18667807-18667927 57 6.80e-06 TGCGATAGTT CAGCCCTG GCAACCAGCT chr3R:13710787-13710907 52 6.80e-06 CCGCAACCTG CAGCCCTG GCCTCAACAG chr2L:13367547-13367667 35 6.80e-06 TTTTATACAC CAGCCCTG GTTTATCTGG chr3L:4286962-4287082 63 6.80e-06 TTCAGTGTCG CAGCCCTG GTAAGTTCCG chr3R:17733489-17733609 93 6.80e-06 GTGCAGTCGT CAGCCCTG GCGAACAGCT chr3L:15509525-15509645 73 6.80e-06 CTGCAGTTTG CAGCCCTG GCGCTCAGCT chr2R:24664333-24664453 84 6.80e-06 TACGTCTCAG CAGCCCTG GATCTAAATC chr3R:23995649-23995769 5 6.80e-06 AACT CAGCCCTG TTAATATTTG chr2R:12423485-12423605 85 6.80e-06 TTGTTGTTTC CAGCCCTG GTTTGGGAAA chr3R:22747576-22747696 80 1.63e-05 TTGGGTGTGG CAGCACTG GCTGatttaa chr3L:20823494-20823614 94 1.63e-05 ttaacttttc cagcactg ggtaagcgta chrX:15697410-15697530 40 1.63e-05 GCCAGGCTGG CAGCACTG CCGGATCAGC chrX:17423431-17423551 40 1.63e-05 TAGTGTTTTG CAGCACTG CTCTGCCCGT chr2L:10743895-10744015 51 1.63e-05 AAATATCTGG CAGCACTG TCTTAAATGA chr2L:2575030-2575150 53 2.32e-05 AAAAGTCTGG CAGCGCTG CATATTGGTG chr3R:24148886-24149006 73 2.32e-05 CAGCTGTCGC CAGCGCTG CCAGATCCGG chr2R:23402249-23402369 94 2.32e-05 TGCAGGGTGG CAGCGCTG TGTGCTGCAA chr2R:16143083-16143203 34 2.32e-05 CAACTCCCTG CAGCGCTG CCACCTGCCG chr3R:20592595-20592715 97 3.28e-05 TTTTATTTAA CAGCTCTG TTTGGCTAAT chr3R:15786632-15786752 81 3.28e-05 ACTGAGTTGA CAGCTCTG ACTCAAATCC chr2L:4973907-4974027 53 4.71e-05 TCAAACCTGG CAACCCTG GCTGCCAGCC chr3L:1798695-1798815 103 4.71e-05 AGCCGCTCGG CAACCCTG TCCATCAGCT chrX:14201301-14201421 49 4.71e-05 AGCGGGATGG CAGCCCCG CCGATCAGCT chr3R:11231822-11231942 82 4.71e-05 AACGAGTTGG CAGCCCCG CAACACAACG chr3R:19641197-19641317 96 6.72e-05 CAGCTACCAA CAGCACCG TTATATACAT chr3L:4021395-4021515 81 6.72e-05 GGAAACACAG CAACACTG AGTAAACATA chr3R:14513578-14513698 105 6.72e-05 ACACGTTAGC CAACACTG AACTTAGT chr3L:4193877-4193997 52 6.72e-05 GCGCATTTTA CAACACTG CCAAACAATG chrX:8152813-8152933 61 6.72e-05 AAGGTAAGCT CAACACTG CGGTTCGTTA chr3R:10885456-10885576 35 6.72e-05 CGCCCGGTGG CAGCACCG CGCAACAGCT chrX:11891928-11892048 58 6.72e-05 TGCGATCTGG CAGCACCG CTCAGAACAT chr2L:13182580-13182700 74 6.72e-05 ATGGGCCTTA CAACACTG GTTGTTACTG chr2L:4465101-4465221 25 6.72e-05 CTCACGCTGC CAACACTG GCCATTTCTC chr3R:28544770-28544890 56 8.16e-05 AGCTGTTTTA CAGCGCCG CTAACCATCG chrX:10596057-10596177 72 8.16e-05 TTCGTTCTGG CAACGCTG CTTACCAGTC chr2R:23693920-23694040 35 8.83e-05 AGCTGCAATG CAGCCCAG CGAAGGAAGG chr3R:30177622-30177742 22 9.79e-05 TGATAAGAAA CAGCCCTT GCAAAAATAA chr2L:5528026-5528146 24 1.07e-04 CAAACGATAA CAGCACAG TTTGAGAGGC chr3L:5146016-5146136 50 1.28e-04 CTGTGACTGG CAACTCTG ATTGGAATTT chrX:8906938-8907058 11 1.28e-04 CGCCCATCGC CAGCTCCG CAGTCTGGCC chr3R:24659564-24659684 35 1.28e-04 CCGCACTTGG CAACTCTG GCTGCCAGTT chr2R:18426351-18426471 24 1.28e-04 ATAAAGTTGA CAACTCTG ATTTAACCCA chr3L:690449-690569 43 1.28e-04 AAATGGCTGG CAACTCTG CGATGTTGGC chr2R:12321158-12321278 101 1.28e-04 CATAACCTGA CAACTCTG AGACAAAAAA chr3R:14890156-14890276 91 1.48e-04 CAACTTTGCG CAGCGCAG TACATTGGTG chrX:15139742-15139862 5 1.48e-04 ACAA CAGCACTT GGCAAGTTGG chr2L:5096320-5096440 13 1.48e-04 GAGAGGTTTC CAGCGCAG ACACTGTTAG chr3R:30180113-30180233 48 1.48e-04 GTTTTATGGG CAGCACTT GCCACCACAG chr2L:16327016-16327136 62 1.48e-04 ATTAAGTTGG CAGCACTT ACCGGCCAAT chr3L:19896039-19896159 29 1.48e-04 CACTAATTTT CAGCACTT TAAATATTGT chrX:2344576-2344696 103 1.48e-04 GATTTAGCTA CAGCGCAG TTATCGATGT chr2R:18613002-18613122 48 1.58e-04 GTTTCAACGC CAGCGCTT GGCACTTATC chrX:20426965-20427085 64 1.58e-04 TACATCAAAT CAGCGCTT CACCATCAGC chr3L:9358868-9358988 85 1.83e-04 TTGCGTCCAA CAGCTCAG AAATGTAGCA chr2L:7013276-7013396 10 1.83e-04 AATTTGATG CATCCCTG GAGTGACTAT chr2R:24668282-24668402 91 1.83e-04 AATGAAGGTC CATCCCTG GTATAACCGA chr3L:15163578-15163698 102 2.06e-04 ATCtacatgc cagctctt actttacatg chr2L:9911917-9912037 97 2.27e-04 CAGCTGTTCG CAACGCCG GGCCGAACCG chrX:1375408-1375528 40 2.27e-04 AACTACCTGG CATCACTG GCCGCCACTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:21154024-21154144 6.8e-06 58_[+3]_54 chr2R:7463437-7463557 6.8e-06 58_[+3]_54 chr3R:18667807-18667927 6.8e-06 56_[+3]_56 chr3R:13710787-13710907 6.8e-06 51_[+3]_61 chr2L:13367547-13367667 6.8e-06 34_[+3]_78 chr3L:4286962-4287082 6.8e-06 62_[+3]_50 chr3R:17733489-17733609 6.8e-06 92_[+3]_20 chr3L:15509525-15509645 6.8e-06 72_[+3]_40 chr2R:24664333-24664453 6.8e-06 83_[+3]_29 chr3R:23995649-23995769 6.8e-06 4_[+3]_108 chr2R:12423485-12423605 6.8e-06 84_[+3]_28 chr3R:22747576-22747696 1.6e-05 79_[+3]_33 chr3L:20823494-20823614 1.6e-05 93_[+3]_19 chrX:15697410-15697530 1.6e-05 39_[+3]_73 chrX:17423431-17423551 1.6e-05 39_[+3]_73 chr2L:10743895-10744015 1.6e-05 50_[+3]_62 chr2L:2575030-2575150 2.3e-05 52_[+3]_60 chr3R:24148886-24149006 2.3e-05 72_[+3]_40 chr2R:23402249-23402369 2.3e-05 93_[+3]_19 chr2R:16143083-16143203 2.3e-05 33_[+3]_79 chr3R:20592595-20592715 3.3e-05 96_[+3]_16 chr3R:15786632-15786752 3.3e-05 80_[+3]_32 chr2L:4973907-4974027 4.7e-05 52_[+3]_60 chr3L:1798695-1798815 4.7e-05 102_[+3]_10 chrX:14201301-14201421 4.7e-05 48_[+3]_64 chr3R:11231822-11231942 4.7e-05 81_[+3]_31 chr3R:19641197-19641317 6.7e-05 95_[+3]_17 chr3L:4021395-4021515 6.7e-05 80_[+3]_32 chr3R:14513578-14513698 6.7e-05 104_[+3]_8 chr3L:4193877-4193997 6.7e-05 51_[+3]_61 chrX:8152813-8152933 6.7e-05 60_[+3]_52 chr3R:10885456-10885576 6.7e-05 34_[+3]_78 chrX:11891928-11892048 6.7e-05 57_[+3]_55 chr2L:13182580-13182700 6.7e-05 73_[+3]_39 chr2L:4465101-4465221 6.7e-05 24_[+3]_88 chr3R:28544770-28544890 8.2e-05 55_[+3]_57 chrX:10596057-10596177 8.2e-05 71_[+3]_41 chr2R:23693920-23694040 8.8e-05 34_[+3]_78 chr3R:30177622-30177742 9.8e-05 21_[+3]_91 chr2L:5528026-5528146 0.00011 23_[+3]_89 chr3L:5146016-5146136 0.00013 49_[+3]_63 chrX:8906938-8907058 0.00013 10_[+3]_102 chr3R:24659564-24659684 0.00013 34_[+3]_78 chr2R:18426351-18426471 0.00013 23_[+3]_89 chr3L:690449-690569 0.00013 42_[+3]_70 chr2R:12321158-12321278 0.00013 100_[+3]_12 chr3R:14890156-14890276 0.00015 90_[+3]_22 chrX:15139742-15139862 0.00015 4_[+3]_108 chr2L:5096320-5096440 0.00015 12_[+3]_100 chr3R:30180113-30180233 0.00015 47_[+3]_65 chr2L:16327016-16327136 0.00015 61_[+3]_51 chr3L:19896039-19896159 0.00015 28_[+3]_84 chrX:2344576-2344696 0.00015 102_[+3]_10 chr2R:18613002-18613122 0.00016 47_[+3]_65 chrX:20426965-20427085 0.00016 63_[+3]_49 chr3L:9358868-9358988 0.00018 84_[+3]_28 chr2L:7013276-7013396 0.00018 9_[+3]_103 chr2R:24668282-24668402 0.00018 90_[+3]_22 chr3L:15163578-15163698 0.00021 101_[+3]_11 chr2L:9911917-9912037 0.00023 96_[+3]_16 chrX:1375408-1375528 0.00023 39_[+3]_73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCNCTG width=8 seqs=61 chr2L:21154024-21154144 ( 59) CAGCCCTG 1 chr2R:7463437-7463557 ( 59) CAGCCCTG 1 chr3R:18667807-18667927 ( 57) CAGCCCTG 1 chr3R:13710787-13710907 ( 52) CAGCCCTG 1 chr2L:13367547-13367667 ( 35) CAGCCCTG 1 chr3L:4286962-4287082 ( 63) CAGCCCTG 1 chr3R:17733489-17733609 ( 93) CAGCCCTG 1 chr3L:15509525-15509645 ( 73) CAGCCCTG 1 chr2R:24664333-24664453 ( 84) CAGCCCTG 1 chr3R:23995649-23995769 ( 5) CAGCCCTG 1 chr2R:12423485-12423605 ( 85) CAGCCCTG 1 chr3R:22747576-22747696 ( 80) CAGCACTG 1 chr3L:20823494-20823614 ( 94) CAGCACTG 1 chrX:15697410-15697530 ( 40) CAGCACTG 1 chrX:17423431-17423551 ( 40) CAGCACTG 1 chr2L:10743895-10744015 ( 51) CAGCACTG 1 chr2L:2575030-2575150 ( 53) CAGCGCTG 1 chr3R:24148886-24149006 ( 73) CAGCGCTG 1 chr2R:23402249-23402369 ( 94) CAGCGCTG 1 chr2R:16143083-16143203 ( 34) CAGCGCTG 1 chr3R:20592595-20592715 ( 97) CAGCTCTG 1 chr3R:15786632-15786752 ( 81) CAGCTCTG 1 chr2L:4973907-4974027 ( 53) CAACCCTG 1 chr3L:1798695-1798815 ( 103) CAACCCTG 1 chrX:14201301-14201421 ( 49) CAGCCCCG 1 chr3R:11231822-11231942 ( 82) CAGCCCCG 1 chr3R:19641197-19641317 ( 96) CAGCACCG 1 chr3L:4021395-4021515 ( 81) CAACACTG 1 chr3R:14513578-14513698 ( 105) CAACACTG 1 chr3L:4193877-4193997 ( 52) CAACACTG 1 chrX:8152813-8152933 ( 61) CAACACTG 1 chr3R:10885456-10885576 ( 35) CAGCACCG 1 chrX:11891928-11892048 ( 58) CAGCACCG 1 chr2L:13182580-13182700 ( 74) CAACACTG 1 chr2L:4465101-4465221 ( 25) CAACACTG 1 chr3R:28544770-28544890 ( 56) CAGCGCCG 1 chrX:10596057-10596177 ( 72) CAACGCTG 1 chr2R:23693920-23694040 ( 35) CAGCCCAG 1 chr3R:30177622-30177742 ( 22) CAGCCCTT 1 chr2L:5528026-5528146 ( 24) CAGCACAG 1 chr3L:5146016-5146136 ( 50) CAACTCTG 1 chrX:8906938-8907058 ( 11) CAGCTCCG 1 chr3R:24659564-24659684 ( 35) CAACTCTG 1 chr2R:18426351-18426471 ( 24) CAACTCTG 1 chr3L:690449-690569 ( 43) CAACTCTG 1 chr2R:12321158-12321278 ( 101) CAACTCTG 1 chr3R:14890156-14890276 ( 91) CAGCGCAG 1 chrX:15139742-15139862 ( 5) CAGCACTT 1 chr2L:5096320-5096440 ( 13) CAGCGCAG 1 chr3R:30180113-30180233 ( 48) CAGCACTT 1 chr2L:16327016-16327136 ( 62) CAGCACTT 1 chr3L:19896039-19896159 ( 29) CAGCACTT 1 chrX:2344576-2344696 ( 103) CAGCGCAG 1 chr2R:18613002-18613122 ( 48) CAGCGCTT 1 chrX:20426965-20427085 ( 64) CAGCGCTT 1 chr3L:9358868-9358988 ( 85) CAGCTCAG 1 chr2L:7013276-7013396 ( 10) CATCCCTG 1 chr2R:24668282-24668402 ( 91) CATCCCTG 1 chr3L:15163578-15163698 ( 102) CAGCTCTT 1 chr2L:9911917-9912037 ( 97) CAACGCCG 1 chrX:1375408-1375528 ( 40) CATCACTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5678 E= 3.2e-022 -1257 227 -1257 -1257 178 -1257 -1257 -1257 -24 -1257 176 -258 -1257 227 -1257 -1257 17 59 -8 -84 -1257 227 -1257 -1257 -156 -66 -1257 139 -1257 -1257 206 -116 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 61 E= 3.2e-022 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.245902 0.000000 0.704918 0.049180 0.000000 1.000000 0.000000 0.000000 0.327869 0.311475 0.196721 0.163934 0.000000 1.000000 0.000000 0.000000 0.098361 0.131148 0.000000 0.770492 0.000000 0.000000 0.868852 0.131148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCNCTG MEME-3 regular expression -------------------------------------------------------------------------------- CA[GA]C[AC]CTG -------------------------------------------------------------------------------- Time 18.44 secs. ******************************************************************************** ******************************************************************************** MOTIF AWCAGCTG MEME-4 width = 8 sites = 37 llr = 345 E-value = 2.1e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 75:a:::: pos.-specific C :2a::a:: probability G 2:::a::a matrix T 13::::a: bits 2.3 * ** * 2.0 * ** * 1.8 **** * 1.6 ****** Relative 1.4 ****** Entropy 1.1 ****** (13.4 bits) 0.9 ****** 0.7 * ****** 0.5 * ****** 0.2 ******** 0.0 -------- Multilevel AACAGCTG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:1884842-1884962 57 1.34e-05 TGCCGTACGG AACAGCTG ATAAGTCAGC chr2R:10110867-10110987 31 1.34e-05 CCAGCTGATC AACAGCTG AACGATTGTG chr2R:22637681-22637801 77 1.34e-05 CGATGGGTCA AACAGCTG GGTAGTAATA chr2L:8521829-8521949 112 1.34e-05 CGGTGCACTC AACAGCTG A chr2L:14348759-14348879 40 1.34e-05 TGCGGCGATA AACAGCTG ACCAAGTGGG chr2R:10421311-10421431 88 1.34e-05 ATGCAATCCA AACAGCTG ATCCAACAGC chr3L:5146016-5146136 12 1.34e-05 TAAAAAATAG AACAGCTG CAGCTGGTGA chr3R:14879358-14879478 66 1.34e-05 CGAGGGCTGC AACAGCTG AAGTCAGCTG chr3R:22468074-22468194 78 1.34e-05 GATTGATAAG AACAGCTG TAAGTAAACG chr2R:24195431-24195551 68 1.34e-05 TTCGCATGCG AACAGCTG CTTGGCATGT chr2R:24783468-24783588 74 1.34e-05 TTGGCTTGCA AACAGCTG GTTGTCGCTG chr2L:20922908-20923028 49 1.34e-05 GGTGAGATTG AACAGCTG GCGAGCAAGA chrX:7967246-7967366 19 1.34e-05 CACAAGCCCG AACAGCTG TAATCCTGCA chr3R:18980945-18981065 30 1.34e-05 CTATGCACAG AACAGCTG ACCGTTATCG chr2R:12423485-12423605 55 1.34e-05 CATCCGTGCG AACAGCTG TCAGATCAGC chr3R:25335193-25335313 29 1.34e-05 CAACTGAAAA AACAGCTG AGTGAGTAGT chr2R:23560457-23560577 30 1.34e-05 TCGCCGTTCG AACAGCTG TTTTCTGTTG chr3L:2980928-2981048 46 2.70e-05 GATGACGGCG ATCAGCTG TGATCATCAA chrX:12901042-12901162 66 2.70e-05 TGCGGCGAAA ATCAGCTG GCAAAACAGC chr3R:11749549-11749669 76 2.70e-05 AAAACGCCAA ATCAGCTG TTCGGCTGTG chrX:2180759-2180879 36 2.70e-05 AGGATTTAGG ATCAGCTG GCGCCAGACA chr3L:20769487-20769607 55 3.66e-05 CATCCCGGGC ACCAGCTG TCCATCAAGT chr3L:1964340-1964460 84 3.66e-05 GTTCGATGGA ACCAGCTG ACTTGGTACC chrX:546583-546703 43 3.66e-05 ATTTCGAGCT ACCAGCTG CAGCCTGCTA chr3L:16419302-16419422 38 5.97e-05 CAGCTGTTTC TACAGCTG GTTTAAACAG chr2R:13439015-13439135 29 5.97e-05 TTTTATTAAC TACAGCTG TCTTCATTCG chr2L:5096320-5096440 98 6.94e-05 ATTTTCAGTT GTCAGCTG TGCAGTTGTC chr3R:30459198-30459318 65 6.94e-05 CTCCCACGCA GTCAGCTG TGTGCGATTG chr2R:12321158-12321278 42 6.94e-05 AACTCCAGCC GTCAGCTG GTACTTACCT chr3R:10045478-10045598 19 7.62e-05 TAAAAGCATG GCCAGCTG TTATATGTTT chr3R:19027316-19027436 18 7.62e-05 TACCCTCTCG GCCAGCTG ACAAATTGCA chr3R:25594292-25594412 98 7.62e-05 GCTGTCACTT GCCAGCTG CTCGGCAACC chr2L:1164389-1164509 58 9.00e-05 CGAATGGCAC TTCAGCTG GAGCAGAAGA chr3R:10885456-10885576 11 9.00e-05 AATTAACCGC TTCAGCTG GCCAGGCGCC chr2L:4794564-4794684 68 9.00e-05 ACAAATGCGT TTCAGCTG CTCACCGAAA chr3R:28544770-28544890 11 1.09e-04 CGCGTAACGC AGCAGCTG ACTGATACCA chr3R:29723109-29723229 84 1.23e-04 cagcaacaaa aacagcag ctaagaacaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:1884842-1884962 1.3e-05 56_[+4]_56 chr2R:10110867-10110987 1.3e-05 30_[+4]_82 chr2R:22637681-22637801 1.3e-05 76_[+4]_36 chr2L:8521829-8521949 1.3e-05 111_[+4]_1 chr2L:14348759-14348879 1.3e-05 39_[+4]_73 chr2R:10421311-10421431 1.3e-05 87_[+4]_25 chr3L:5146016-5146136 1.3e-05 11_[+4]_101 chr3R:14879358-14879478 1.3e-05 65_[+4]_47 chr3R:22468074-22468194 1.3e-05 77_[+4]_35 chr2R:24195431-24195551 1.3e-05 67_[+4]_45 chr2R:24783468-24783588 1.3e-05 73_[+4]_39 chr2L:20922908-20923028 1.3e-05 48_[+4]_64 chrX:7967246-7967366 1.3e-05 18_[+4]_94 chr3R:18980945-18981065 1.3e-05 29_[+4]_83 chr2R:12423485-12423605 1.3e-05 54_[+4]_58 chr3R:25335193-25335313 1.3e-05 28_[+4]_84 chr2R:23560457-23560577 1.3e-05 29_[+4]_83 chr3L:2980928-2981048 2.7e-05 45_[+4]_67 chrX:12901042-12901162 2.7e-05 65_[+4]_47 chr3R:11749549-11749669 2.7e-05 75_[+4]_37 chrX:2180759-2180879 2.7e-05 35_[+4]_77 chr3L:20769487-20769607 3.7e-05 54_[+4]_58 chr3L:1964340-1964460 3.7e-05 83_[+4]_29 chrX:546583-546703 3.7e-05 42_[+4]_70 chr3L:16419302-16419422 6e-05 37_[+4]_75 chr2R:13439015-13439135 6e-05 28_[+4]_84 chr2L:5096320-5096440 6.9e-05 97_[+4]_15 chr3R:30459198-30459318 6.9e-05 64_[+4]_48 chr2R:12321158-12321278 6.9e-05 41_[+4]_71 chr3R:10045478-10045598 7.6e-05 18_[+4]_94 chr3R:19027316-19027436 7.6e-05 17_[+4]_95 chr3R:25594292-25594412 7.6e-05 97_[+4]_15 chr2L:1164389-1164509 9e-05 57_[+4]_55 chr3R:10885456-10885576 9e-05 10_[+4]_102 chr2L:4794564-4794684 9e-05 67_[+4]_45 chr3R:28544770-28544890 0.00011 10_[+4]_102 chr3R:29723109-29723229 0.00012 83_[+4]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AWCAGCTG width=8 seqs=37 chr3L:1884842-1884962 ( 57) AACAGCTG 1 chr2R:10110867-10110987 ( 31) AACAGCTG 1 chr2R:22637681-22637801 ( 77) AACAGCTG 1 chr2L:8521829-8521949 ( 112) AACAGCTG 1 chr2L:14348759-14348879 ( 40) AACAGCTG 1 chr2R:10421311-10421431 ( 88) AACAGCTG 1 chr3L:5146016-5146136 ( 12) AACAGCTG 1 chr3R:14879358-14879478 ( 66) AACAGCTG 1 chr3R:22468074-22468194 ( 78) AACAGCTG 1 chr2R:24195431-24195551 ( 68) AACAGCTG 1 chr2R:24783468-24783588 ( 74) AACAGCTG 1 chr2L:20922908-20923028 ( 49) AACAGCTG 1 chrX:7967246-7967366 ( 19) AACAGCTG 1 chr3R:18980945-18981065 ( 30) AACAGCTG 1 chr2R:12423485-12423605 ( 55) AACAGCTG 1 chr3R:25335193-25335313 ( 29) AACAGCTG 1 chr2R:23560457-23560577 ( 30) AACAGCTG 1 chr3L:2980928-2981048 ( 46) ATCAGCTG 1 chrX:12901042-12901162 ( 66) ATCAGCTG 1 chr3R:11749549-11749669 ( 76) ATCAGCTG 1 chrX:2180759-2180879 ( 36) ATCAGCTG 1 chr3L:20769487-20769607 ( 55) ACCAGCTG 1 chr3L:1964340-1964460 ( 84) ACCAGCTG 1 chrX:546583-546703 ( 43) ACCAGCTG 1 chr3L:16419302-16419422 ( 38) TACAGCTG 1 chr2R:13439015-13439135 ( 29) TACAGCTG 1 chr2L:5096320-5096440 ( 98) GTCAGCTG 1 chr3R:30459198-30459318 ( 65) GTCAGCTG 1 chr2R:12321158-12321278 ( 42) GTCAGCTG 1 chr3R:10045478-10045598 ( 19) GCCAGCTG 1 chr3R:19027316-19027436 ( 18) GCCAGCTG 1 chr3R:25594292-25594412 ( 98) GCCAGCTG 1 chr2L:1164389-1164509 ( 58) TTCAGCTG 1 chr3R:10885456-10885576 ( 11) TTCAGCTG 1 chr2L:4794564-4794684 ( 68) TTCAGCTG 1 chr3R:28544770-28544890 ( 11) AGCAGCTG 1 chr3R:29723109-29723229 ( 84) AACAGCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.4486 E= 2.1e-013 127 -1185 -36 -112 89 -35 -294 -12 -1185 227 -1185 -1185 178 -1185 -1185 -1185 -1185 -1185 226 -1185 -1185 227 -1185 -1185 -342 -1185 -1185 173 -1185 -1185 226 -1185 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 37 E= 2.1e-013 0.702703 0.000000 0.162162 0.135135 0.540541 0.162162 0.027027 0.270270 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.027027 0.000000 0.000000 0.972973 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 regular expression -------------------------------------------------------------------------------- A[AT]CAGCTG -------------------------------------------------------------------------------- Time 24.02 secs. ******************************************************************************** ******************************************************************************** MOTIF KGSYGCCA MEME-5 width = 8 sites = 30 llr = 280 E-value = 1.3e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::a pos.-specific C :347:aa: probability G 576:a::: matrix T 5::3:::: bits 2.3 *** 2.0 *** 1.8 **** 1.6 **** Relative 1.4 ** **** Entropy 1.1 ******* (13.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGGCGCCA consensus GCCT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:20922908-20923028 67 4.83e-06 GCGAGCAAGA GGGCGCCA CTGTTACGGA chr3R:30425151-30425271 112 4.83e-06 TGACAGTAGA GGGCGCCA C chr2R:7539695-7539815 67 1.17e-05 GATGCTCATT TGGCGCCA AAGGAAAATT chr3L:6082685-6082805 29 1.17e-05 GGCTCGAAAG TGGCGCCA CCTACCGTAC chr3L:4193877-4193997 18 1.17e-05 GATCAAAATT TGGCGCCA ACATTTTTGG chrX:8152813-8152933 38 1.17e-05 ATTTCAAATG TGGCGCCA CAACCAAGGT chr3R:17805237-17805357 50 1.17e-05 TGCCAAGCGG TGGCGCCA AAATTTGAAA chr3R:17733489-17733609 47 1.17e-05 TGGCTTCTAG TGGCGCCA TCTAGGTGTG chr2L:15005627-15005747 29 1.17e-05 AATTCAAATT TGGCGCCA AGCTAATGTG chr2R:13206656-13206776 9 1.17e-05 ATTCGTTT TGGCGCCA AATGTTGCTG chr3R:25493466-25493586 35 2.33e-05 ATTCAAATTA TGCCGCCA AAAAATCTAC chr2L:19497984-19498104 98 2.81e-05 TTTTCAAAAG GCGCGCCA CTTTTTATCG chr2R:14526183-14526303 3 2.81e-05 GA GCGCGCCA AACAGCGCAT chrX:15697410-15697530 76 2.81e-05 TTTTCTGTGT GCGCGCCA TCCCTAGAAA chrX:1375408-1375528 16 2.81e-05 GTTTTAAATT GCGCGCCA CTGCGGAACT chr3R:10815183-10815303 32 2.81e-05 GTTTTTAAAC GCGCGCCA CAAAGGGGAA chr3R:15786632-15786752 9 2.81e-05 TTAAATAT GCGCGCCA ATTCTGACAG chr2L:3711695-3711815 1 4.17e-05 . TCGCGCCA AAATGGCAAA chr3R:30465732-30465852 94 4.65e-05 AATTCAAATT GCCCGCCA CCATATACGA chrX:15139742-15139862 93 4.65e-05 GCTTATTATT GCCCGCCA ATTTTGAAGT chr3R:7913252-7913372 50 6.98e-05 GTTGCCTTCG GGCTGCCA ACCTGTTTCA chrX:8900218-8900338 65 6.98e-05 CTGTCCGCAG GGCTGCCA GATCGTCGAG chr3L:6958048-6958168 63 6.98e-05 ATCGTAACGG GGCTGCCA ACTTGGGTAT chr3R:24918427-24918547 56 6.98e-05 GATTCCGCCT GGCTGCCA CCTGATTTGT chr2L:12436363-12436483 69 7.95e-05 CAGCTGTTTG TGCTGCCA TTTTACTGCC chrX:8906938-8907058 49 7.95e-05 CTGTTCCCAG TGCTGCCA GACAGCGGCA chr2L:6036853-6036973 64 7.95e-05 CATGCAGCAG TGCTGCCA ACTCACGCAA chr2R:12138691-12138811 37 7.95e-05 AAAAATGCAG TGCTGCCA CTACGATCGA chrX:12901042-12901162 99 7.95e-05 GGCCATCTAG TGCTGCCA TGCTGGCGTT chr2R:12692691-12692811 43 7.95e-05 TACAACTGTG TGCTGCCA CTTCTTTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:20922908-20923028 4.8e-06 66_[+5]_46 chr3R:30425151-30425271 4.8e-06 111_[+5]_1 chr2R:7539695-7539815 1.2e-05 66_[+5]_46 chr3L:6082685-6082805 1.2e-05 28_[+5]_84 chr3L:4193877-4193997 1.2e-05 17_[+5]_95 chrX:8152813-8152933 1.2e-05 37_[+5]_75 chr3R:17805237-17805357 1.2e-05 49_[+5]_63 chr3R:17733489-17733609 1.2e-05 46_[+5]_66 chr2L:15005627-15005747 1.2e-05 28_[+5]_84 chr2R:13206656-13206776 1.2e-05 8_[+5]_104 chr3R:25493466-25493586 2.3e-05 34_[+5]_78 chr2L:19497984-19498104 2.8e-05 97_[+5]_15 chr2R:14526183-14526303 2.8e-05 2_[+5]_110 chrX:15697410-15697530 2.8e-05 75_[+5]_37 chrX:1375408-1375528 2.8e-05 15_[+5]_97 chr3R:10815183-10815303 2.8e-05 31_[+5]_81 chr3R:15786632-15786752 2.8e-05 8_[+5]_104 chr2L:3711695-3711815 4.2e-05 [+5]_112 chr3R:30465732-30465852 4.7e-05 93_[+5]_19 chrX:15139742-15139862 4.7e-05 92_[+5]_20 chr3R:7913252-7913372 7e-05 49_[+5]_63 chrX:8900218-8900338 7e-05 64_[+5]_48 chr3L:6958048-6958168 7e-05 62_[+5]_50 chr3R:24918427-24918547 7e-05 55_[+5]_57 chr2L:12436363-12436483 7.9e-05 68_[+5]_44 chrX:8906938-8907058 7.9e-05 48_[+5]_64 chr2L:6036853-6036973 7.9e-05 63_[+5]_49 chr2R:12138691-12138811 7.9e-05 36_[+5]_76 chrX:12901042-12901162 7.9e-05 98_[+5]_14 chr2R:12692691-12692811 7.9e-05 42_[+5]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KGSYGCCA width=8 seqs=30 chr2L:20922908-20923028 ( 67) GGGCGCCA 1 chr3R:30425151-30425271 ( 112) GGGCGCCA 1 chr2R:7539695-7539815 ( 67) TGGCGCCA 1 chr3L:6082685-6082805 ( 29) TGGCGCCA 1 chr3L:4193877-4193997 ( 18) TGGCGCCA 1 chrX:8152813-8152933 ( 38) TGGCGCCA 1 chr3R:17805237-17805357 ( 50) TGGCGCCA 1 chr3R:17733489-17733609 ( 47) TGGCGCCA 1 chr2L:15005627-15005747 ( 29) TGGCGCCA 1 chr2R:13206656-13206776 ( 9) TGGCGCCA 1 chr3R:25493466-25493586 ( 35) TGCCGCCA 1 chr2L:19497984-19498104 ( 98) GCGCGCCA 1 chr2R:14526183-14526303 ( 3) GCGCGCCA 1 chrX:15697410-15697530 ( 76) GCGCGCCA 1 chrX:1375408-1375528 ( 16) GCGCGCCA 1 chr3R:10815183-10815303 ( 32) GCGCGCCA 1 chr3R:15786632-15786752 ( 9) GCGCGCCA 1 chr2L:3711695-3711815 ( 1) TCGCGCCA 1 chr3R:30465732-30465852 ( 94) GCCCGCCA 1 chrX:15139742-15139862 ( 93) GCCCGCCA 1 chr3R:7913252-7913372 ( 50) GGCTGCCA 1 chrX:8900218-8900338 ( 65) GGCTGCCA 1 chr3L:6958048-6958168 ( 63) GGCTGCCA 1 chr3R:24918427-24918547 ( 56) GGCTGCCA 1 chr2L:12436363-12436483 ( 69) TGCTGCCA 1 chrX:8906938-8907058 ( 49) TGCTGCCA 1 chr2L:6036853-6036973 ( 64) TGCTGCCA 1 chr2R:12138691-12138811 ( 37) TGCTGCCA 1 chrX:12901042-12901162 ( 99) TGCTGCCA 1 chr2R:12692691-12692811 ( 43) TGCTGCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5523 E= 1.3e-005 -1155 -1155 116 86 -1155 54 175 -1155 -1155 107 144 -1155 -1155 169 -1155 18 -1155 -1155 226 -1155 -1155 227 -1155 -1155 -1155 227 -1155 -1155 178 -1155 -1155 -1155 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 30 E= 1.3e-005 0.000000 0.000000 0.466667 0.533333 0.000000 0.300000 0.700000 0.000000 0.000000 0.433333 0.566667 0.000000 0.000000 0.666667 0.000000 0.333333 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGSYGCCA MEME-5 regular expression -------------------------------------------------------------------------------- [TG][GC][GC][CT]GCCA -------------------------------------------------------------------------------- Time 29.53 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:12321158-12321278 5.55e-07 24_[+2(2.70e-05)]_9_[+4(6.94e-05)]_\ 15_[+4(1.34e-05)]_48 chr2L:4465101-4465221 1.35e-05 24_[+3(6.72e-05)]_34_[+1(1.37e-05)]_\ 46 chr2L:13179195-13179315 3.66e-04 49_[+4(1.34e-05)]_63 chr3R:7902645-7902765 1.15e-03 76_[+1(2.73e-05)]_36 chr2L:12048889-12049009 8.49e-04 45_[+4(1.34e-05)]_67 chr2R:23560457-23560577 4.77e-04 29_[+4(1.34e-05)]_14_[+1(1.37e-05)]_\ 61 chr3R:15786632-15786752 4.18e-07 8_[+5(2.81e-05)]_36_[+4(1.34e-05)]_\ 20_[+3(3.28e-05)]_32 chrX:2344576-2344696 4.91e-03 111_[+2(7.29e-05)]_1 chr2L:2744947-2745067 5.65e-01 120 chrX:3936266-3936386 6.40e-04 1_[+4(1.34e-05)]_111 chr3R:22613667-22613787 3.14e-06 11_[+2(2.70e-05)]_13_[+4(1.34e-05)]_\ 80 chr2L:13182580-13182700 2.17e-05 19_[+1(1.37e-05)]_46_[+3(6.72e-05)]_\ 39 chr3R:9754601-9754721 3.80e-05 53_[+4(1.34e-05)]_59 chr2L:16282832-16282952 1.81e-01 120 chr3R:11231822-11231942 3.72e-05 57_[+1(1.37e-05)]_16_[+3(4.71e-05)]_\ 31 chr3L:16100158-16100278 7.85e-02 120 chrX:20426965-20427085 2.12e-05 77_[+1(1.37e-05)]_35 chr2L:4794564-4794684 2.11e-03 42_[+4(2.70e-05)]_19_[+1(8.51e-05)]_\ 43 chr2L:10743895-10744015 2.25e-07 11_[+1(1.37e-05)]_31_[+3(1.63e-05)]_\ 10_[+2(2.70e-05)]_44 chr3R:21878641-21878761 3.81e-05 38_[+4(1.34e-05)]_6_[+2(7.29e-05)]_\ 60 chrX:2180759-2180879 1.49e-06 41_[+5(1.17e-05)]_23_[+2(2.70e-05)]_\ 13_[+4(2.70e-05)]_19 chr2R:24668282-24668402 1.14e-04 55_[+4(1.34e-05)]_57 chr2L:1502846-1502966 3.52e-03 84_[+1(1.37e-05)]_28 chr3R:11749549-11749669 9.51e-05 77_[+1(1.37e-05)]_19_[+4(1.34e-05)]_\ 8 chr3L:16233071-16233191 1.03e-03 44_[+1(1.37e-05)]_68 chr3L:2780791-2780911 2.71e-03 93_[+4(1.34e-05)]_19 chr3R:25335193-25335313 2.74e-03 28_[+4(1.34e-05)]_36_[+4(1.34e-05)]_\ 40 chr2R:12423485-12423605 8.44e-06 54_[+4(1.34e-05)]_6_[+1(1.37e-05)]_\ 8_[+3(6.80e-06)]_28 chr2R:13220149-13220269 1.21e-03 90_[+1(1.37e-05)]_22 chr3R:18980945-18981065 5.54e-05 29_[+4(1.34e-05)]_20_[+1(2.73e-05)]_\ 55 chr3R:11230488-11230608 1.56e-03 66_[+1(9.20e-05)]_46 chr2R:16957424-16957544 7.74e-03 49_[+4(2.70e-05)]_63 chr3R:8303995-8304115 6.61e-04 22_[+1(1.37e-05)]_90 chr3L:16417018-16417138 5.55e-01 120 chr3R:30425151-30425271 5.49e-08 49_[+1(1.37e-05)]_8_[+2(2.70e-05)]_\ 38_[+5(4.83e-06)]_1 chrX:7967246-7967366 1.84e-03 18_[+4(1.34e-05)]_30_[+4(9.96e-05)]_\ 56 chr3R:20831111-20831231 1.23e-03 29_[+1(1.37e-05)]_83 chr2R:13206656-13206776 3.52e-07 8_[+5(1.17e-05)]_15_[+2(2.70e-05)]_\ 33_[+1(1.37e-05)]_40 chr3R:30177622-30177742 1.14e-04 21_[+3(9.79e-05)]_31_[+1(1.37e-05)]_\ 52 chr3R:24918427-24918547 1.13e-04 38_[+4(1.34e-05)]_9_[+5(6.98e-05)]_\ 57 chr2R:12692691-12692811 2.06e-03 42_[+5(7.95e-05)]_70 chr2R:20870700-20870820 3.42e-02 109_[+1(2.73e-05)]_3 chr3L:19845201-19845321 4.71e-04 52_[+4(2.70e-05)]_60 chr3L:2782125-2782245 4.10e-04 94_[+4(1.34e-05)]_18 chr3L:17427173-17427293 6.20e-01 120 chrX:14201301-14201421 2.03e-05 48_[+3(4.71e-05)]_3_[+4(2.70e-05)]_\ 53 chr3R:14259916-14260036 2.91e-04 72_[+4(1.34e-05)]_40 chr3L:18622255-18622375 5.98e-01 120 chr2L:20922908-20923028 1.60e-05 11_[+1(7.55e-05)]_29_[+4(1.34e-05)]_\ 10_[+5(4.83e-06)]_46 chrX:3936466-3936586 1.74e-02 120 chr3L:17035590-17035710 4.89e-06 18_[+2(7.29e-05)]_13_[+2(2.70e-05)]_\ 24_[+1(1.37e-05)]_41 chr3R:26058223-26058343 4.11e-03 58_[+4(1.34e-05)]_54 chr3R:13699467-13699587 2.50e-03 73_[+1(1.37e-05)]_39 chr3R:23995649-23995769 7.54e-07 4_[+3(6.80e-06)]_18_[+4(1.34e-05)]_\ 82 chr2R:16142096-16142216 1.93e-04 89_[+1(1.37e-05)]_23 chr3R:25489931-25490051 5.47e-02 120 chr2L:7013276-7013396 2.40e-04 103_[+4(1.34e-05)]_9 chr2L:18606803-18606923 2.00e-03 58_[+1(1.37e-05)]_54 chr2L:15005627-15005747 1.14e-04 28_[+5(1.17e-05)]_74_[+4(2.70e-05)]_\ 2 chr2R:7655426-7655546 6.83e-01 120 chr2L:10728914-10729034 1.30e-04 25_[+2(7.29e-05)]_25_[+1(1.37e-05)]_\ 54 chrX:12901042-12901162 1.66e-04 65_[+4(2.70e-05)]_4_[+4(1.34e-05)]_\ 13_[+5(7.95e-05)]_14 chr2R:19390057-19390177 8.35e-04 46_[+1(1.37e-05)]_66 chr2R:24783468-24783588 1.21e-04 20_[+4(2.70e-05)]_45_[+4(1.34e-05)]_\ 39 chr2R:16143083-16143203 7.79e-06 33_[+3(2.32e-05)]_15_[+1(1.37e-05)]_\ 56 chr3R:25594292-25594412 1.51e-03 83_[+4(2.70e-05)]_6_[+4(7.62e-05)]_\ 15 chr3L:690449-690569 3.16e-07 18_[+2(2.70e-05)]_46_[+4(1.34e-05)]_\ 40 chr2L:4949735-4949855 1.20e-03 40_[+1(1.37e-05)]_72 chr2R:12138691-12138811 1.20e-05 36_[+5(7.95e-05)]_27_[+1(2.73e-05)]_\ 41 chr2L:19530272-19530392 1.70e-03 13_[+4(1.34e-05)]_99 chr2R:24664333-24664453 1.96e-07 19_[+2(7.29e-05)]_20_[+2(2.70e-05)]_\ 28_[+3(6.80e-06)]_9_[+1(1.37e-05)]_12 chr3L:19896039-19896159 2.26e-01 120 chr2R:24661478-24661598 1.06e-03 32_[+4(1.34e-05)]_80 chr2L:8043302-8043422 1.06e-01 120 chr3R:10815183-10815303 6.54e-05 31_[+5(2.81e-05)]_17_[+4(1.34e-05)]_\ 56 chr2L:12020888-12021008 1.59e-04 69_[+1(1.37e-05)]_43 chr3L:12267455-12267575 1.63e-03 76_[+1(2.73e-05)]_36 chr2L:16327016-16327136 9.07e-03 120 chrX:19618464-19618584 2.27e-04 49_[+4(1.34e-05)]_63 chr3L:16348119-16348239 2.41e-01 120 chrX:5695176-5695296 2.36e-06 25_[+2(2.70e-05)]_19_[+1(1.37e-05)]_\ 37_[+2(2.70e-05)]_15 chr2R:17781889-17782009 7.60e-05 12_[+4(1.34e-05)]_100 chr3L:15509525-15509645 8.01e-06 72_[+3(6.80e-06)]_5_[+1(1.37e-05)]_\ 27 chr3R:11236152-11236272 6.86e-04 93_[+4(1.34e-05)]_19 chr3R:9756309-9756429 5.94e-01 120 chr2L:6048601-6048721 2.97e-01 108_[+2(7.29e-05)]_4 chr3L:6958048-6958168 2.29e-05 44_[+4(1.34e-05)]_10_[+5(6.98e-05)]_\ 50 chrX:546583-546703 8.50e-04 17_[+1(1.37e-05)]_17_[+4(3.66e-05)]_\ 70 chrX:11891928-11892048 1.80e-02 57_[+3(6.72e-05)]_55 chr3L:17849673-17849793 1.03e-02 26_[+1(3.69e-05)]_86 chr3R:17733489-17733609 2.02e-07 46_[+5(1.17e-05)]_38_[+3(6.80e-06)]_\ 3_[+4(1.34e-05)]_9 chr3R:30180113-30180233 2.08e-05 85_[+1(1.37e-05)]_27 chr3R:5563621-5563741 1.02e-03 6_[+4(1.34e-05)]_106 chrX:10220047-10220167 1.06e-04 6_[+2(9.22e-05)]_34_[+1(1.37e-05)]_\ 64 chr2R:24195431-24195551 2.62e-04 26_[+1(2.73e-05)]_33_[+4(1.34e-05)]_\ 45 chr2L:4818192-4818312 2.12e-04 19_[+4(1.34e-05)]_93 chr3L:834048-834168 3.34e-03 67_[+4(1.34e-05)]_45 chr3R:22468074-22468194 1.09e-03 60_[+4(1.34e-05)]_9_[+4(1.34e-05)]_\ 35 chrX:254849-254969 1.25e-04 41_[+4(1.34e-05)]_71 chr3L:20361561-20361681 7.40e-06 31_[+4(2.70e-05)]_10_[+2(2.70e-05)]_\ 13_[+2(7.29e-05)]_42 chr2R:23402249-23402369 9.99e-06 47_[+1(1.37e-05)]_38_[+3(2.32e-05)]_\ 19 chr2L:8196826-8196946 4.36e-03 69_[+4(1.34e-05)]_43 chr3L:3376689-3376809 4.30e-05 30_[+2(7.29e-05)]_13_[+1(1.37e-05)]_\ 61 chr3L:18112910-18113030 3.06e-04 28_[+4(1.34e-05)]_84 chr2R:23693920-23694040 1.18e-06 14_[+2(2.70e-05)]_12_[+3(8.83e-05)]_\ 28_[+4(1.34e-05)]_42 chr2R:24057153-24057273 3.73e-01 120 chr3L:20129096-20129216 4.74e-03 84_[+1(1.37e-05)]_28 chr3R:19027316-19027436 4.29e-03 19_[+1(5.62e-05)]_26_[+1(3.69e-05)]_\ 59 chr3R:17805237-17805357 1.41e-02 49_[+5(1.17e-05)]_63 chr3R:24148886-24149006 9.52e-07 60_[+4(2.70e-05)]_4_[+3(2.32e-05)]_\ 40 chrX:5916803-5916923 7.58e-02 120 chrX:1375408-1375528 9.60e-08 15_[+5(2.81e-05)]_23_[+5(1.65e-05)]_\ 2_[+2(2.70e-05)]_41_[+4(2.70e-05)]_7 chr3R:7155016-7155136 7.37e-01 120 chrX:8294931-8295051 3.15e-02 120 chr3R:30459198-30459318 4.35e-06 44_[+4(1.34e-05)]_14_[+1(4.66e-05)]_\ 31_[+2(2.70e-05)]_7 chr2L:5528026-5528146 7.01e-05 4_[+2(7.29e-05)]_33_[+1(2.73e-05)]_\ 67 chr2L:8686030-8686150 1.00e+00 120 chr2R:13205378-13205498 7.40e-01 120 chrX:10596057-10596177 2.03e-05 71_[+3(8.16e-05)]_9_[+1(1.37e-05)]_\ 24 chr3R:27116657-27116777 5.41e-05 52_[+2(7.29e-05)]_20_[+4(1.34e-05)]_\ 32 chr2L:2979243-2979363 2.63e-04 35_[+4(1.34e-05)]_77 chr2R:18658176-18658296 4.33e-04 104_[+4(1.34e-05)]_8 chr2R:11982826-11982946 7.86e-04 103_[+1(2.73e-05)]_9 chr2R:13439220-13439340 5.79e-01 120 chr2L:5096320-5096440 8.34e-05 48_[+1(1.37e-05)]_43_[+1(4.66e-05)]_\ 13 chr3L:21529287-21529407 4.81e-03 8_[+4(2.70e-05)]_104 chr2L:11120247-11120367 1.14e-05 58_[+1(1.37e-05)]_10_[+2(2.70e-05)]_\ 36 chr2L:2575030-2575150 2.56e-06 26_[+4(1.34e-05)]_18_[+3(2.32e-05)]_\ 60 chr2L:1728639-1728759 3.26e-01 120 chr2R:20278900-20279020 1.40e-02 36_[+1(1.37e-05)]_76 chr2L:10342598-10342718 1.28e-05 [+1(2.73e-05)]_[+4(2.70e-05)]_50_\ [+2(2.70e-05)]_46 chrX:17423431-17423551 1.61e-05 39_[+3(1.63e-05)]_48_[+1(1.37e-05)]_\ 17 chr2R:18613002-18613122 8.37e-07 30_[+4(1.34e-05)]_23_[+2(2.70e-05)]_\ 51 chr2L:16286138-16286258 9.53e-03 45_[+1(1.37e-05)]_67 chr2L:4198025-4198145 1.14e-03 37_[+4(1.34e-05)]_75 chr2L:6036853-6036973 2.41e-04 3_[+1(4.66e-05)]_52_[+5(7.95e-05)]_\ 49 chr3R:10885456-10885576 1.14e-06 10_[+4(9.00e-05)]_16_[+3(6.72e-05)]_\ 3_[+4(1.34e-05)]_67 chr3L:16587091-16587211 5.38e-01 120 chr3L:1964340-1964460 2.04e-04 43_[+4(1.34e-05)]_32_[+4(3.66e-05)]_\ 29 chrX:15697410-15697530 1.45e-06 39_[+3(1.63e-05)]_4_[+4(2.70e-05)]_\ 16_[+5(2.81e-05)]_37 chr2R:14526183-14526303 2.03e-02 2_[+5(2.81e-05)]_110 chr2L:18943882-18944002 4.67e-05 48_[+1(2.73e-05)]_41_[+2(7.29e-05)]_\ 15 chr2L:16287344-16287464 4.55e-03 5_[+4(6.94e-05)]_4_[+1(8.51e-05)]_\ 95 chrX:8152813-8152933 7.66e-07 37_[+5(1.17e-05)]_15_[+3(6.72e-05)]_\ 22_[+4(2.70e-05)]_22 chr2L:10009858-10009978 5.60e-03 85_[+4(1.34e-05)]_27 chr2R:16196512-16196632 6.82e-02 120 chr3R:11407900-11408020 6.07e-05 38_[+4(1.34e-05)]_74 chr2R:18426351-18426471 1.03e-04 54_[+4(1.34e-05)]_58 chr2L:21397290-21397410 1.97e-03 57_[+4(2.70e-05)]_55 chr3L:15163578-15163698 2.07e-03 120 chr3L:4193877-4193997 5.76e-07 17_[+5(1.17e-05)]_26_[+3(6.72e-05)]_\ 35_[+1(1.37e-05)]_18 chr3R:14513578-14513698 4.23e-05 43_[+4(1.34e-05)]_53_[+3(6.72e-05)]_\ 8 chr3L:20769487-20769607 1.41e-04 15_[+4(1.34e-05)]_31_[+4(3.66e-05)]_\ 58 chr3R:20592595-20592715 7.96e-05 80_[+1(1.37e-05)]_8_[+3(3.28e-05)]_\ 16 chr3L:9679069-9679189 4.52e-04 38_[+1(2.73e-05)]_35_[+2(7.29e-05)]_\ 31 chrX:8121079-8121199 3.11e-03 53_[+4(2.70e-05)]_59 chr3L:18667287-18667407 5.13e-04 75_[+1(1.37e-05)]_37 chr2R:17518128-17518248 2.67e-04 50_[+1(1.37e-05)]_62 chr2R:13439015-13439135 7.92e-05 30_[+1(3.69e-05)]_39_[+4(1.34e-05)]_\ 35 chr3R:25335396-25335516 3.13e-01 120 chr3L:4286962-4287082 2.06e-05 62_[+3(6.80e-06)]_18_[+4(4.62e-05)]_\ 24 chrX:8251685-8251805 5.71e-03 13_[+4(4.62e-05)]_99 chr3L:8634034-8634154 9.97e-05 51_[+4(1.34e-05)]_61 chr3R:24659564-24659684 6.68e-08 2_[+2(2.70e-05)]_31_[+5(6.98e-05)]_\ 18_[+4(1.34e-05)]_45 chr2R:13485298-13485418 1.37e-04 70_[+4(2.70e-05)]_42 chr2L:3711695-3711815 1.34e-06 [+5(4.17e-05)]_14_[+4(1.34e-05)]_90 chr3L:8954421-8954541 4.11e-05 53_[+2(2.70e-05)]_15_[+4(1.34e-05)]_\ 36 chr3L:3060150-3060270 1.07e-03 84_[+4(1.34e-05)]_28 chr3R:14879358-14879478 6.79e-04 65_[+4(1.34e-05)]_2_[+4(6.94e-05)]_\ 37 chr2L:16879394-16879514 2.05e-06 29_[+2(2.70e-05)]_48_[+4(1.34e-05)]_\ 27 chr2R:12425516-12425636 7.22e-04 53_[+4(2.70e-05)]_59 chr3L:11691574-11691694 1.33e-03 79_[+1(1.37e-05)]_33 chr2R:22483217-22483337 3.52e-03 34_[+2(2.70e-05)]_46_[+2(2.70e-05)]_\ 24 chr3R:11626788-11626908 5.70e-05 65_[+2(9.22e-05)]_7_[+1(1.37e-05)]_\ 32 chrX:15139742-15139862 2.39e-06 51_[+1(1.37e-05)]_33_[+5(4.65e-05)]_\ 20 chrX:9159891-9160011 2.09e-05 59_[+4(1.34e-05)]_20_[+2(2.70e-05)]_\ 25 chr2L:13367547-13367667 9.29e-06 34_[+3(6.80e-06)]_34_[+4(1.34e-05)]_\ 36 chr3R:13710787-13710907 1.14e-05 51_[+3(6.80e-06)]_31_[+1(1.37e-05)]_\ 22 chrX:8906938-8907058 1.08e-06 48_[+5(7.95e-05)]_31_[+1(1.37e-05)]_\ 25 chr3L:2980928-2981048 2.51e-05 31_[+2(7.29e-05)]_6_[+4(2.70e-05)]_\ 15_[+4(1.34e-05)]_44 chr2L:10270052-10270172 1.73e-01 120 chr3R:18667807-18667927 1.89e-07 26_[+2(9.22e-05)]_22_[+3(6.80e-06)]_\ 5_[+1(1.37e-05)]_43 chr3L:6082685-6082805 4.59e-06 7_[+4(2.70e-05)]_13_[+5(1.17e-05)]_\ 84 chr2L:7182022-7182142 4.60e-01 120 chr3L:5146016-5146136 7.18e-05 11_[+4(1.34e-05)]_[+1(7.55e-05)]_82_\ [+1(1.37e-05)]_3 chr2R:23553950-23554070 1.10e-03 2_[+1(1.37e-05)]_110 chr2R:10421311-10421431 2.35e-03 87_[+4(1.34e-05)]_4_[+4(1.34e-05)]_\ 13 chr3R:28696160-28696280 1.97e-03 82_[+1(2.73e-05)]_30 chr3R:10045478-10045598 3.65e-05 20_[+1(1.37e-05)]_14_[+1(1.37e-05)]_\ 8_[+2(2.70e-05)]_54 chr2L:3319817-3319937 7.96e-04 110_[+2(2.70e-05)]_2 chr3R:30465732-30465852 3.06e-02 93_[+5(4.65e-05)]_19 chr3L:20823494-20823614 8.53e-02 93_[+3(1.63e-05)]_19 chr2R:21025055-21025175 4.64e-04 53_[+4(1.34e-05)]_59 chr2R:17407215-17407335 5.51e-02 120 chr2R:21312656-21312776 9.86e-04 6_[+1(2.73e-05)]_106 chr2R:19396238-19396358 9.89e-01 120 chr2R:7463437-7463557 3.11e-06 58_[+3(6.80e-06)]_5_[+1(1.37e-05)]_\ 41 chr3L:1798695-1798815 3.91e-04 76_[+2(7.29e-05)]_18_[+3(4.71e-05)]_\ 10 chr3R:10048815-10048935 6.64e-04 39_[+1(1.37e-05)]_2_[+2(7.29e-05)]_\ 63 chr3R:28544770-28544890 5.71e-05 12_[+1(5.62e-05)]_24_[+1(1.37e-05)]_\ 3_[+3(8.16e-05)]_57 chrX:8900218-8900338 2.82e-05 39_[+1(1.37e-05)]_17_[+5(6.98e-05)]_\ 48 chr2L:1164389-1164509 4.02e-02 57_[+4(9.00e-05)]_55 chr3R:10708278-10708398 1.19e-04 62_[+1(5.62e-05)]_26_[+2(2.70e-05)]_\ 16 chr2L:18677122-18677242 5.80e-04 40_[+4(1.34e-05)]_72 chr3R:7913252-7913372 6.42e-05 34_[+1(1.37e-05)]_7_[+5(6.98e-05)]_\ 63 chr3L:9358868-9358988 6.07e-05 68_[+1(1.37e-05)]_44 chr3L:10886057-10886177 1.11e-03 61_[+1(1.37e-05)]_51 chr2L:9911917-9912037 1.45e-04 86_[+1(1.37e-05)]_26 chr3L:8178309-8178429 3.49e-03 92_[+1(2.73e-05)]_20 chr3L:5136324-5136444 6.39e-05 54_[+1(1.37e-05)]_58 chr2L:14348759-14348879 9.68e-05 15_[+4(1.34e-05)]_16_[+4(1.34e-05)]_\ 73 chr3R:29723109-29723229 2.22e-04 50_[+1(1.37e-05)]_62 chr3R:26876572-26876692 3.35e-06 8_[+2(2.70e-05)]_26_[+4(1.34e-05)]_\ 70 chrX:1460601-1460721 4.13e-05 50_[+4(2.70e-05)]_62 chr2R:14860713-14860833 6.78e-04 48_[+1(1.37e-05)]_64 chr3L:711846-711966 7.98e-02 29_[+2(2.70e-05)]_83 chr2L:19497984-19498104 3.67e-02 97_[+5(2.81e-05)]_15 chr2L:1752097-1752217 7.59e-06 28_[+4(1.34e-05)]_17_[+2(2.70e-05)]_\ 59 chr2R:24574461-24574581 7.38e-05 100_[+4(1.34e-05)]_12 chr3R:14890156-14890276 1.10e-04 60_[+4(1.34e-05)]_52 chr3L:16419302-16419422 1.64e-04 27_[+1(1.37e-05)]_2_[+4(5.97e-05)]_\ 75 chr3R:15933821-15933941 1.25e-05 1_[+2(2.70e-05)]_32_[+1(1.37e-05)]_\ 71 chr2L:8521829-8521949 3.33e-03 58_[+4(2.70e-05)]_45_[+4(1.34e-05)]_\ 1 chr2R:13239394-13239514 9.95e-04 54_[+4(2.70e-05)]_58 chrX:1342010-1342130 1.05e-05 67_[+2(2.70e-05)]_27_[+1(1.37e-05)]_\ 10 chrX:6661406-6661526 1.17e-04 41_[+2(2.70e-05)]_34_[+1(1.37e-05)]_\ 29 chr2L:5100113-5100233 1.08e-02 99_[+4(6.94e-05)]_13 chr2R:9145194-9145314 2.53e-04 73_[+1(1.37e-05)]_39 chr2R:22637681-22637801 2.18e-05 6_[+1(1.37e-05)]_38_[+2(2.70e-05)]_\ 16_[+4(1.34e-05)]_36 chr3L:8297039-8297159 9.53e-06 82_[+2(2.70e-05)]_18_[+4(1.34e-05)]_\ 4 chr2L:12063201-12063321 2.00e-01 120 chr2R:10110867-10110987 3.07e-03 21_[+1(2.73e-05)]_1_[+4(1.34e-05)]_\ 82 chr3L:4021395-4021515 3.51e-02 80_[+3(6.72e-05)]_32 chr2R:7539695-7539815 7.83e-06 25_[+4(2.70e-05)]_33_[+5(1.17e-05)]_\ 46 chr3R:5463294-5463414 2.26e-02 100_[+1(5.62e-05)]_12 chr2L:4973907-4974027 1.07e-06 52_[+3(4.71e-05)]_21_[+4(1.34e-05)]_\ 31 chr2L:21154024-21154144 8.02e-07 33_[+1(1.37e-05)]_17_[+3(6.80e-06)]_\ 54 chr3R:25493466-25493586 3.43e-02 34_[+5(2.33e-05)]_78 chr3R:22747576-22747696 5.90e-02 79_[+3(1.63e-05)]_33 chr3R:9456524-9456644 1.03e-04 27_[+1(1.37e-05)]_25_[+2(2.70e-05)]_\ 52 chr3L:1884842-1884962 4.17e-04 56_[+4(1.34e-05)]_6_[+1(2.73e-05)]_\ 42 chr3R:16614345-16614465 6.82e-05 37_[+1(2.73e-05)]_18_[+2(7.29e-05)]_\ 7_[+2(2.70e-05)]_34 chr3R:7246954-7247074 2.75e-03 34_[+4(1.34e-05)]_78 chr3R:26863337-26863457 1.95e-04 66_[+4(1.34e-05)]_46 chr2L:18158655-18158775 5.41e-01 120 chr3R:19641197-19641317 2.35e-04 46_[+4(3.66e-05)]_41_[+3(6.72e-05)]_\ 17 chr3L:21617505-21617625 6.64e-01 120 chr2L:19114316-19114436 2.82e-04 61_[+4(1.34e-05)]_51 chr3L:11815345-11815465 2.42e-06 41_[+2(2.70e-05)]_54_[+4(1.34e-05)]_\ 9 chr2L:12436363-12436483 8.79e-06 58_[+1(1.37e-05)]_2_[+5(7.95e-05)]_\ 44 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n12.farnam.hpc.yale.internal ********************************************************************************