******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/Sry-δ.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2R:17786059-17786179 1.0000 120 chr2R:8939816-8939936 1.0000 120 chr3L:20788083-20788203 1.0000 120 chr2R:15218340-15218460 1.0000 120 chr2R:7709491-7709611 1.0000 120 chrX:18101892-18102012 1.0000 120 chr3L:5897379-5897499 1.0000 120 chrX:18090470-18090590 1.0000 120 chr2R:13552411-13552531 1.0000 120 chr2L:10483209-10483329 1.0000 120 chrX:6261033-6261153 1.0000 120 chrX:13090360-13090480 1.0000 120 chr3L:12118230-12118350 1.0000 120 chrX:3948949-3949069 1.0000 120 chr2L:13000585-13000705 1.0000 120 chrX:16640381-16640501 1.0000 120 chrX:15292962-15293082 1.0000 120 chr3R:22726879-22726999 1.0000 120 chr3L:13486296-13486416 1.0000 120 chrX:15574508-15574628 1.0000 120 chr3R:22381247-22381367 1.0000 120 chr3R:8217887-8218007 1.0000 120 chrX:11129028-11129148 1.0000 120 chrX:19664497-19664617 1.0000 120 chr2R:17781886-17782006 1.0000 120 chr2L:8220666-8220786 1.0000 120 chr2L:8305529-8305649 1.0000 120 chr3L:3162081-3162201 1.0000 120 chr3L:11626376-11626496 1.0000 120 chrX:17579207-17579327 1.0000 120 chr3R:10052840-10052960 1.0000 120 chr2R:17670008-17670128 1.0000 120 chrX:12017957-12018077 1.0000 120 chr3L:18904892-18905012 1.0000 120 chrX:9085859-9085979 1.0000 120 chr2L:8449542-8449662 1.0000 120 chr3R:16484158-16484278 1.0000 120 chr2L:5278946-5279066 1.0000 120 chrX:13194389-13194509 1.0000 120 chr3R:27938469-27938589 1.0000 120 chr2R:10885166-10885286 1.0000 120 chr3R:11749410-11749530 1.0000 120 chrX:6090209-6090329 1.0000 120 chrX:13091050-13091170 1.0000 120 chr3L:20028947-20029067 1.0000 120 chrX:15345099-15345219 1.0000 120 chr3R:5554245-5554365 1.0000 120 chr3L:1756256-1756376 1.0000 120 chr3R:7644459-7644579 1.0000 120 chrX:13285820-13285940 1.0000 120 chr2L:6960260-6960380 1.0000 120 chr2L:10405106-10405226 1.0000 120 chr2R:10068662-10068782 1.0000 120 chr2R:18411558-18411678 1.0000 120 chr2L:10728887-10729007 1.0000 120 chr3L:13412756-13412876 1.0000 120 chr2L:2969621-2969741 1.0000 120 chr2R:19191641-19191761 1.0000 120 chr4:481919-482039 1.0000 120 chr2L:5532177-5532297 1.0000 120 chr3R:29724884-29725004 1.0000 120 chrX:9273286-9273406 1.0000 120 chrX:17078746-17078866 1.0000 120 chr2L:3145665-3145785 1.0000 120 chrX:9556528-9556648 1.0000 120 chrX:16803323-16803443 1.0000 120 chr3L:8966729-8966849 1.0000 120 chrX:16599135-16599255 1.0000 120 chr3L:6955450-6955570 1.0000 120 chr2R:23396662-23396782 1.0000 120 chr3L:20491675-20491795 1.0000 120 chrX:11888289-11888409 1.0000 120 chr3L:20427612-20427732 1.0000 120 chr3R:24230068-24230188 1.0000 120 chr2R:6648481-6648601 1.0000 120 chr2R:8167876-8167996 1.0000 120 chr2L:15271958-15272078 1.0000 120 chr3R:10407263-10407383 1.0000 120 chrX:9159943-9160063 1.0000 120 chr3L:19836496-19836616 1.0000 120 chr2L:15038809-15038929 1.0000 120 chr2L:21677680-21677800 1.0000 120 chrX:9163179-9163299 1.0000 120 chrX:5691141-5691261 1.0000 120 chr2R:22185924-22186044 1.0000 120 chr2L:11100824-11100944 1.0000 120 chr3R:5659048-5659168 1.0000 120 chr3R:11412517-11412637 1.0000 120 chr2L:1982153-1982273 1.0000 120 chr2R:14771616-14771736 1.0000 120 chrX:22443670-22443790 1.0000 120 chr2R:16142117-16142237 1.0000 120 chrX:13718244-13718364 1.0000 120 chr3L:4607131-4607251 1.0000 120 chr3L:21441369-21441489 1.0000 120 chrX:8240574-8240694 1.0000 120 chrX:12018160-12018280 1.0000 120 chrX:23007632-23007752 1.0000 120 chr2R:23843256-23843376 1.0000 120 chr2L:19756887-19757007 1.0000 120 chrX:23097471-23097591 1.0000 120 chr2R:18614985-18615105 1.0000 120 chr2R:14770795-14770915 1.0000 120 chr3L:20361534-20361654 1.0000 120 chrX:11868964-11869084 1.0000 120 chrX:2727630-2727750 1.0000 120 chrX:4936209-4936329 1.0000 120 chr3R:15361635-15361755 1.0000 120 chr3R:15803581-15803701 1.0000 120 chrX:13154938-13155058 1.0000 120 chr3R:11437686-11437806 1.0000 120 chr3L:4406027-4406147 1.0000 120 chrX:8906152-8906272 1.0000 120 chr2L:1704852-1704972 1.0000 120 chr2L:16825152-16825272 1.0000 120 chr2R:5760786-5760906 1.0000 120 chr3R:29835054-29835174 1.0000 120 chr2R:17056789-17056909 1.0000 120 chr2L:8302939-8303059 1.0000 120 chrX:1900155-1900275 1.0000 120 chr3L:14006924-14007044 1.0000 120 chr3L:174662-174782 1.0000 120 chr2R:20262816-20262936 1.0000 120 chr2L:5271292-5271412 1.0000 120 chr3L:3937950-3938070 1.0000 120 chr2R:24603507-24603627 1.0000 120 chrX:18648099-18648219 1.0000 120 chr3L:22288144-22288264 1.0000 120 chrX:13212279-13212399 1.0000 120 chr2L:19033418-19033538 1.0000 120 chr2L:4847662-4847782 1.0000 120 chrX:10082465-10082585 1.0000 120 chr2R:21386203-21386323 1.0000 120 chr2L:8030226-8030346 1.0000 120 chr3L:4367465-4367585 1.0000 120 chr2L:9893355-9893475 1.0000 120 chrX:13285620-13285740 1.0000 120 chrX:8489726-8489846 1.0000 120 chr2R:16001233-16001353 1.0000 120 chr2L:20734864-20734984 1.0000 120 chr2L:1478632-1478752 1.0000 120 chr3L:3055011-3055131 1.0000 120 chr2R:17456432-17456552 1.0000 120 chr3L:13011703-13011823 1.0000 120 chr3R:10708292-10708412 1.0000 120 chr3R:14655639-14655759 1.0000 120 chr2R:12514973-12515093 1.0000 120 chr2L:5720984-5721104 1.0000 120 chrX:4931149-4931269 1.0000 120 chrX:11092381-11092501 1.0000 120 chrX:127363-127483 1.0000 120 chr3R:4390265-4390385 1.0000 120 chr3L:9624144-9624264 1.0000 120 chrX:5873303-5873423 1.0000 120 chr3R:6380316-6380436 1.0000 120 chrX:8101975-8102095 1.0000 120 chr3R:24661804-24661924 1.0000 120 chr2L:20065654-20065774 1.0000 120 chr3R:24234902-24235022 1.0000 120 chr3L:13994136-13994256 1.0000 120 chr3L:3192474-3192594 1.0000 120 chr3L:4283781-4283901 1.0000 120 chr3L:8304107-8304227 1.0000 120 chr3R:15832642-15832762 1.0000 120 chrX:1773633-1773753 1.0000 120 chr2L:10743890-10744010 1.0000 120 chr3R:5550597-5550717 1.0000 120 chr3R:12456483-12456603 1.0000 120 chr2L:15039038-15039158 1.0000 120 chr3L:12417507-12417627 1.0000 120 chr3R:16652287-16652407 1.0000 120 chrX:17143176-17143296 1.0000 120 chr2L:10517217-10517337 1.0000 120 chr3R:30806594-30806714 1.0000 120 chr3R:15363792-15363912 1.0000 120 chr3R:31738367-31738487 1.0000 120 chr2R:17669337-17669457 1.0000 120 chrX:1664969-1665089 1.0000 120 chr2R:18094870-18094990 1.0000 120 chr2R:7711978-7712098 1.0000 120 chr2R:11844187-11844307 1.0000 120 chr3R:25122820-25122940 1.0000 120 chrX:5941973-5942093 1.0000 120 chr3R:16651089-16651209 1.0000 120 chrX:5317296-5317416 1.0000 120 chr2L:10396608-10396728 1.0000 120 chr2R:22420306-22420426 1.0000 120 chrX:2713956-2714076 1.0000 120 chr3R:10413178-10413298 1.0000 120 chr4:1033020-1033140 1.0000 120 chr2R:17723250-17723370 1.0000 120 chr3L:11626577-11626697 1.0000 120 chr3R:21886935-21887055 1.0000 120 chr3R:7093683-7093803 1.0000 120 chr3R:18738222-18738342 1.0000 120 chrX:19746033-19746153 1.0000 120 chr2L:19064864-19064984 1.0000 120 chr3R:24805215-24805335 1.0000 120 chr3L:22072166-22072286 1.0000 120 chr3L:15816848-15816968 1.0000 120 chr2L:4387042-4387162 1.0000 120 chrX:7074434-7074554 1.0000 120 chr2L:5096322-5096442 1.0000 120 chr3L:11825690-11825810 1.0000 120 chr3R:5219529-5219649 1.0000 120 chrX:9162049-9162169 1.0000 120 chr2L:6677589-6677709 1.0000 120 chr3R:11407831-11407951 1.0000 120 chrX:5695152-5695272 1.0000 120 chr2L:10321246-10321366 1.0000 120 chr2L:10435972-10436092 1.0000 120 chr2R:9882313-9882433 1.0000 120 chr3R:27116648-27116768 1.0000 120 chr2L:16879377-16879497 1.0000 120 chr3R:21360076-21360196 1.0000 120 chrX:15802961-15803081 1.0000 120 chr3R:19644988-19645108 1.0000 120 chr4:1231779-1231899 1.0000 120 chr2L:560335-560455 1.0000 120 chrX:15482283-15482403 1.0000 120 chrX:23105880-23106000 1.0000 120 chr3L:17024239-17024359 1.0000 120 chr3L:19845186-19845306 1.0000 120 chrX:12763610-12763730 1.0000 120 chr2L:19041782-19041902 1.0000 120 chrX:2180821-2180941 1.0000 120 chr3R:17687007-17687127 1.0000 120 chr2R:23972397-23972517 1.0000 120 chr3R:9763130-9763250 1.0000 120 chrX:15484597-15484717 1.0000 120 chrX:6037738-6037858 1.0000 120 chr3L:8449343-8449463 1.0000 120 chr3L:4103146-4103266 1.0000 120 chr2L:10230573-10230693 1.0000 120 chr2L:19034571-19034691 1.0000 120 chrX:17852649-17852769 1.0000 120 chr3L:12118431-12118551 1.0000 120 chrX:4686867-4686987 1.0000 120 chr2R:20667260-20667380 1.0000 120 chrX:5332407-5332527 1.0000 120 chrX:16587187-16587307 1.0000 120 chr2L:10056845-10056965 1.0000 120 chrX:10595964-10596084 1.0000 120 chrX:15796172-15796292 1.0000 120 chr2R:23939709-23939829 1.0000 120 chr3R:4232301-4232421 1.0000 120 chr3L:14942924-14943044 1.0000 120 chr3R:23053459-23053579 1.0000 120 chr2R:14601153-14601273 1.0000 120 chrX:2698456-2698576 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_Sry-δ/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/Sry-δ.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.302 C 0.199 G 0.202 T 0.297 Background letter frequencies (from file dataset with add-one prior applied): A 0.302 C 0.199 G 0.202 T 0.297 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-1 width = 8 sites = 223 llr = 1716 E-value = 7.5e-225 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 29:::a17 pos.-specific C 1:1a:::: probability G ::::a::2 matrix T 619:::91 bits 2.3 ** 2.1 ** 1.9 ** 1.6 *** Relative 1.4 ***** Entropy 1.2 ****** (11.1 bits) 0.9 ****** 0.7 ****** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:4232301-4232421 50 2.90e-05 GATATACCAA TATCGATA AGTTGAGCCA chr2R:23939709-23939829 61 2.90e-05 TACACAGACA TATCGATA GCTCCTAGAG chrX:10595964-10596084 84 2.90e-05 TCAGTGGAGT TATCGATA GCAGCCAAGC chrX:17852649-17852769 66 2.90e-05 AAGCGATAAG TATCGATA GATTCTAAAA chr2R:23972397-23972517 23 2.90e-05 AGAATCGACT TATCGATA ACAGCATTAT chrX:2180821-2180941 11 2.90e-05 TGCTTATCGC TATCGATA ACAGCAAACT chrX:12763610-12763730 34 2.90e-05 TTGCTGCTCA TATCGATA CATATGTATA chr3L:17024239-17024359 92 2.90e-05 GTCAGAGATA TATCGATA CCAGAGCGAG chrX:15482283-15482403 39 2.90e-05 TAGGAAATTC TATCGATA CTTCGAAGCG chr2L:560335-560455 80 2.90e-05 TTGGATAAAA TATCGATA AGCAGTGCCT chr4:1231779-1231899 76 2.90e-05 CCATCGAAGT TATCGATA GTTCCATCGA chr3R:19644988-19645108 27 2.90e-05 GCTGACTAGC TATCGATA TCACCGATAG chrX:15802961-15803081 37 2.90e-05 TCAGTCTAGA TATCGATA AGTATTATCG chr2L:16879377-16879497 47 2.90e-05 GTGAGCTAAC TATCGATA TATCCATTAG chr2R:9882313-9882433 101 2.90e-05 AATAAAATGT TATCGATA CCAATGGTAA chr2L:10435972-10436092 17 2.90e-05 ATGTTCCAGC TATCGATA TCAGACTTAC chrX:5695152-5695272 50 2.90e-05 TTTTGTTGAC TATCGATA TTGGCCAGGT chr3L:15816848-15816968 106 2.90e-05 ATTAAACATC TATCGATA GTATCGA chr2L:19064864-19064984 4 2.90e-05 TGT TATCGATA TGTTGACTAA chr2R:22420306-22420426 65 2.90e-05 ACTTGGTGAC TATCGATA ACGAACCGGA chr2L:10396608-10396728 105 2.90e-05 CGCTTGCTAT TATCGATA GTTTGAGC chr3R:16651089-16651209 78 2.90e-05 TCCCTGAGTC TATCGATA GTTTTCCCAG chr2R:7711978-7712098 91 2.90e-05 AGCAATTATT TATCGATA AGACGGCAAA chrX:1664969-1665089 70 2.90e-05 GGCGACTGGC TATCGATA CTGCTAGTGC chr2R:17669337-17669457 14 2.90e-05 AAACTTCGGA TATCGATA TGCTCTTTTT chr3R:30806594-30806714 1 2.90e-05 . TATCGATA GACCGATATC chr3R:16652287-16652407 91 2.90e-05 GTTTCCGACT TATCGATA GGAATTAAGT chr3L:12417507-12417627 107 2.90e-05 TTGGGCATAC TATCGATA TTTACC chr2L:10743890-10744010 74 2.90e-05 TCTTAAATGA TATCGATA GCGATGCTTC chrX:1773633-1773753 33 2.90e-05 ATATCCAAAA TATCGATA TAAGCGGACT chr3R:15832642-15832762 49 2.90e-05 TGACATGAAA TATCGATA ACGATCTTTG chr3R:24234902-24235022 23 2.90e-05 TCTACTCTGT TATCGATA ATTAAATTTT chr2L:20065654-20065774 47 2.90e-05 CCAATCGAAA TATCGATA TTATTAGACA chr3R:24661804-24661924 59 2.90e-05 TCGTTGAAGC TATCGATA AGCTCAAATC chrX:5873303-5873423 38 2.90e-05 ATGCGGGCGT TATCGATA ACCTCGATAA chr3R:4390265-4390385 65 2.90e-05 CCATTCATAA TATCGATA TCTTAAGAAC chrX:11092381-11092501 97 2.90e-05 TCTAGGGATG TATCGATA TGCAATCGAT chr2L:5720984-5721104 42 2.90e-05 TCGATTTTCT TATCGATA AAATTGCTAA chr3R:10708292-10708412 83 2.90e-05 AGTATGTACC TATCGATA TATCGGTGGA chr3L:13011703-13011823 42 2.90e-05 CAACGATTCT TATCGATA GCTCTACGCA chrX:13285620-13285740 22 2.90e-05 TGTTCGATAC TATCGATA CGGTCGTAGA chr2L:9893355-9893475 74 2.90e-05 TTTTCCATGT TATCGATA TCGAAAGTGA chr2L:4847662-4847782 61 2.90e-05 AGCACGAAAA TATCGATA GAAAACATCG chrX:13212279-13212399 34 2.90e-05 ACTTCGACGC TATCGATA AGCATCGATT chr3L:22288144-22288264 80 2.90e-05 GATATATTGC TATCGATA ACGATAGCTA chr3L:3937950-3938070 86 2.90e-05 GCAACCGCTC TATCGATA TTTCTTACAG chr2L:5271292-5271412 111 2.90e-05 ATCGACGCGG TATCGATA TT chr2R:20262816-20262936 87 2.90e-05 CGACTGAATC TATCGATA GCAGCCAGCG chr3L:174662-174782 28 2.90e-05 GCTTAGTATG TATCGATA GTAATCGATA chr3L:14006924-14007044 75 2.90e-05 CCTTAACTTT TATCGATA AAGGCAATGT chr2R:5760786-5760906 36 2.90e-05 TAATATAATT TATCGATA GTTGATATTT chr3L:4406027-4406147 88 2.90e-05 AGCGGGCTCT TATCGATA GCGCAAATAA chrX:13154938-13155058 64 2.90e-05 CTGCCGGAAC TATCGATA GCTTCTTTTA chr3R:15361635-15361755 49 2.90e-05 TGTCGGCAAC TATCGATA TGGTTAATAC chr3L:20361534-20361654 77 2.90e-05 TGTCAGTTGT TATCGATA GTTTTCTGCT chr2L:19756887-19757007 53 2.90e-05 AGTGACCAGC TATCGATA GCAGTTCTAT chrX:13718244-13718364 91 2.90e-05 TGGGCGCTGT TATCGATA GCGATTTGCA chrX:5691141-5691261 60 2.90e-05 GCTAACTAGT TATCGATA ACGGACTTGA chrX:9163179-9163299 32 2.90e-05 TTTCAAAAAC TATCGATA CGTGGCTGTG chrX:9159943-9160063 36 2.90e-05 GCCTGCTGGC TATCGATA CTCGCTATCG chr3R:10407263-10407383 109 2.90e-05 GTAATTGAAC TATCGATA GATA chr2L:15271958-15272078 97 2.90e-05 TGGTGATAGC TATCGATA GTACTTTTCC chr2R:8167876-8167996 16 2.90e-05 CGCGCCATGA TATCGATA AAAATCGATT chr2L:3145665-3145785 91 2.90e-05 AACTCTCAGC TATCGATA GCGTGCGAAC chrX:13285820-13285940 28 2.90e-05 GATAGCTAAG TATCGATA TTTTCGACGA chrX:13091050-13091170 66 2.90e-05 CGTTGGGATA TATCGATA GGACCAACTG chrX:6090209-6090329 64 2.90e-05 ACAACATTGA TATCGATA ATAAACTAAC chr3R:11749410-11749530 63 2.90e-05 ATGAGCGTTG TATCGATA TGTCAGCATA chr2L:5278946-5279066 57 2.90e-05 TCTATCGCAC TATCGATA ACCTTGTGCA chr3R:16484158-16484278 79 2.90e-05 TGGCGCCAGA TATCGATA AGCCGTAATC chrX:17579207-17579327 22 2.90e-05 TGTGGAGTAA TATCGATA AAAAGTATCG chr3L:3162081-3162201 39 2.90e-05 GGTATAAAAA TATCGATA TTTTCGCTGG chrX:19664497-19664617 49 2.90e-05 GAATATATCG TATCGATA TTCGTGCTCG chrX:11129028-11129148 85 2.90e-05 CTACGCGCGT TATCGATA TCGAAAGCTG chr3R:22381247-22381367 52 2.90e-05 TCGGACTGTT TATCGATA GGCTAGAGGC chrX:15292962-15293082 64 2.90e-05 CCGCGCTATT TATCGATA AGTCACCAAT chrX:3948949-3949069 8 2.90e-05 CTAAAAA TATCGATA CCCGATGCAT chrX:6261033-6261153 65 2.90e-05 TTTGCACGCA TATCGATA CTTGATGCCA chr2L:10483209-10483329 59 2.90e-05 AGTTGGTTCT TATCGATA ACGGACGGGG chr3L:5897379-5897499 50 2.90e-05 TGTTGTCAAT TATCGATA TCTATGTGCA chr2R:8939816-8939936 84 2.90e-05 CACCCACTGA TATCGATA GCATGCAATT chr2L:10230573-10230693 99 4.84e-05 TCGATAAAGG TATCGATG ATTTTTTTTT chr3L:8449343-8449463 61 4.84e-05 TTCTTGTGGC TATCGATG TTAGGCGCAG chrX:6037738-6037858 50 4.84e-05 CGATGCGCAG TATCGATG GAAAACCATC chr3R:9763130-9763250 39 4.84e-05 TCGATGTTAG TATCGATG TCGTTTTCGA chr2R:11844187-11844307 56 4.84e-05 TTGCAGAACT TATCGATG GCCGCTTTAT chrX:8489726-8489846 39 4.84e-05 TATCGCCGTC TATCGATG ACACCGATAG chr3R:29835054-29835174 57 4.84e-05 TGGCGATACT TATCGATG TGACATCGGC chrX:8240574-8240694 59 4.84e-05 AAATTGAACA TATCGATG TAGCACAAAG chr3L:19836496-19836616 51 4.84e-05 GTTATCGAAC TATCGATG GCTCATCGCA chr4:481919-482039 45 4.84e-05 GCTGGAGAAA TATCGATG AAAACATCGA chr2L:2969621-2969741 63 4.84e-05 CGATTACATT TATCGATG TCGACCGGTT chr2L:10728887-10729007 53 4.84e-05 GAATATATGA TATCGATG TTTGCAATCG chrX:12017957-12018077 70 4.84e-05 TTTTATTTGC TATCGATG GTTATGGTTT chr2L:8305529-8305649 31 4.84e-05 TGAGCCAACG TATCGATG TATCGGTTGT chr3L:13486296-13486416 35 4.84e-05 ACTGTGCCGC TATCGATG GTTTTTACTT chr3R:21360076-21360196 73 6.78e-05 AGGTGCCAAA CATCGATA ACATAGTGAG chr3R:27116648-27116768 79 6.78e-05 AGTAGCCGCT CATCGATA GGCAACAGCT chr3L:3192474-3192594 35 6.78e-05 CGATGGGAGG CATCGATA ACAGAATTGA chrX:127363-127483 40 6.78e-05 TTCGAGCACA CATCGATA CTGGCGATAG chrX:4931149-4931269 95 6.78e-05 CGATGCCAAA CATCGATA TTTTCAAAAA chr3R:11437686-11437806 23 6.78e-05 GACGGCGCGA CATCGATA CATACATCGA chrX:4936209-4936329 6 6.78e-05 CCAAA CATCGATA TTTTCAAAAA chrX:23007632-23007752 101 6.78e-05 CATAACGATT CATCGATA TTTTTCTTGA chrX:9556528-9556648 7 6.78e-05 GACCGT CATCGATA ACACGAAAAC chrX:17078746-17078866 63 6.78e-05 AACCTCGGTG CATCGATA TTAGCATCGA chrX:9273286-9273406 87 6.78e-05 TAAAATTAAA CATCGATA GAAAAATTAA chrX:9085859-9085979 35 6.78e-05 CCAACCAACT CATCGATA GCTCTTCGAT chr2R:17670008-17670128 39 6.78e-05 ACGAAACGTA CATCGATA TGCTGTGTCC chr2L:8220666-8220786 90 6.78e-05 GCAGCTCTAA CATCGATA TCGAAAAAGC chrX:18090470-18090590 48 6.78e-05 TCGATGACAT CATCGATA TCATCGATCT chrX:15796172-15796292 102 9.73e-05 TGCCATGGAC AATCGATA GCAGGACTCA chrX:4686867-4686987 71 9.73e-05 GCAGCACACC AATCGATA ACAACGAGGA chr2L:19041782-19041902 78 9.73e-05 TTTACACGCT AATCGATA ACAACGTAGC chrX:23105880-23106000 111 9.73e-05 GCCGATGATT AATCGATA CT chrX:9162049-9162169 13 9.73e-05 GTGCAAGTTT AATCGATA GACGCTGACG chr3L:11825690-11825810 39 9.73e-05 AAACATTTAT AATCGATA GTTTTCTATC chr2R:18094870-18094990 65 9.73e-05 CAAGCCTAAA AATCGATA GTATCGAATA chr3R:12456483-12456603 32 9.73e-05 TATCTTTTAA AATCGATA GTACCATGTG chr2R:17056789-17056909 93 9.73e-05 GATTCCCTTT AATCGATA CGTAGTTTTT chr3L:21441369-21441489 37 9.73e-05 ACGATAGAAC AATCGATA CTAATGGGCT chr2R:22185924-22186044 54 9.73e-05 CTAGCATGTC AATCGATA TCAGGACGTC chrX:15345099-15345219 79 9.73e-05 TTAATGCTGT AATCGATA ACTTTGATTG chr3L:11626376-11626496 13 9.73e-05 AAACAAAGAC AATCGATA GAAGTTTCCG chr3R:8217887-8218007 35 9.73e-05 TCTTCTGCGT AATCGATA TGAATAGATA chr2L:13000585-13000705 96 9.73e-05 TGCTATCTGA AATCGATA TTTTCTCGCC chr3L:12118230-12118350 18 9.73e-05 TTTCTAGAAA AATCGATA TCGAGCTGCT chr2R:13552411-13552531 56 9.73e-05 TCGATTAAAT AATCGATA GCATCGATTT chr2R:17786059-17786179 14 9.73e-05 TTGATAGCTT AATCGATA ACGTTTGCGA chr2R:14601153-14601273 58 1.26e-04 GGTGGAACCG TATCGATT TTAACGGTCA chr3R:23053459-23053579 89 1.26e-04 AGCCAATGTT TATCGATT GGAGCGCGTG chr3L:14942924-14943044 11 1.26e-04 ACTCCTCGCC TATCGATT ATTTTTGGAG chr3R:11407831-11407951 41 1.26e-04 ACATTGGACT TATCGATT TTCCAATTAG chr3R:15363792-15363912 99 1.26e-04 TTCATTAGCT TATCGATT AATTATTGGA chr2L:8302939-8303059 97 1.26e-04 TCACCGCAGA TATCGATT AATGGTCTAT chr2L:16825152-16825272 70 1.26e-04 GAGTTTTCGA TATCGATT GTTTATAGTT chr2R:16142117-16142237 55 1.26e-04 TCAATCGATC TATCGATT AACAGTCAGC chr2L:1982153-1982273 27 1.26e-04 TATACAAAGA TATCGATT TAGCGAGACT chr2L:15038809-15038929 70 1.26e-04 CGAGCGGTGA TATCGATT GTACCTGCCT chr3L:6955450-6955570 69 1.26e-04 TCGGTGTTAA TATCGATT GGTTCGATAG chrX:16599135-16599255 62 1.26e-04 GCAGGCAACG TATCGATT AGCACACGCT chr3R:29724884-29725004 91 1.26e-04 TAGAGACTGC TATCGATT ACACAGATTA chr3R:21886935-21887055 21 1.58e-04 TTTTTTCGAA TACCGATA ATTACGCGCC chr3R:5550597-5550717 98 1.58e-04 CGTCACTCGA TACCGATA CCCGCCAATT chrX:18648099-18648219 54 1.58e-04 TTTTCGAAAA CATCGATG ACATCGATGT chr3R:15803581-15803701 29 1.58e-04 AATTGAACGT TACCGATA GTTGGCACTG chrX:2727630-2727750 48 1.58e-04 AATCGAAATC CATCGATG ACTGCTGCAC chr2R:6648481-6648601 106 1.58e-04 TTTTCAAAAA CATCGATG TTTCTCC chrX:16803323-16803443 19 1.58e-04 AAATCGCAAA CATCGATG TTTTTCGAGG chr3L:13412756-13412876 48 1.58e-04 AAGAAAAAAC CATCGATG ACGACGATGG chrX:13090360-13090480 74 1.58e-04 ATGCATCAGC CATCGATG GTTCTTCGCC chr2R:15218340-15218460 34 1.58e-04 TCCATGCTAG CATCGATG TTTCTCCATC chr2L:6677589-6677709 86 1.78e-04 TTTAAAAATC AATCGATG TTTTTTCAGA chr2L:1704852-1704972 18 1.78e-04 TCGAGCGAGC AATCGATG CTCCACCAAA chr2L:11100824-11100944 50 1.78e-04 GTGCTAGGGC AATCGATG GACAGCGTCT chr2R:17781886-17782006 79 1.78e-04 CGAAAGTGCC AATCGATG TGTACTCGAT chr2L:10056845-10056965 57 2.07e-04 TGGCATCAAA TTTCGATA ACTGACAAAG chr3L:9624144-9624264 41 2.07e-04 ACGATAGACT TTTCGATA GTATACAAAT chr2R:16001233-16001353 54 2.07e-04 GATGGCCAAG TTTCGATA GCTCTTTCAC chr3L:20788083-20788203 37 2.07e-04 TTTGATGGTT TTTCGATA GGCTTTCAGG chr2L:19033418-19033538 86 2.36e-04 GCACGACAGC TATCGAAA GCCATTGAGA chr3L:20491675-20491795 86 2.36e-04 TGGAAAACAA TATCGAAA ACAACTCGGC chr2R:19191641-19191761 15 2.36e-04 AAAAGTACTA TATCGAAA ATAAATTTCG chr2L:6960260-6960380 84 2.36e-04 GCAAAACAGT TATCGAAA TTTAGCAACA chr2R:10068662-10068782 54 2.75e-04 GGAAGTTCTA GATCGATA TATGCTCAAC chr3L:18904892-18905012 42 2.75e-04 CAACGCTTTT GATCGATA GATGACAACT chr3R:10052840-10052960 78 2.75e-04 CTTCAATCAC GATCGATA GGAAATTAAT chr3R:22726879-22726999 86 2.75e-04 ATCGAGACAA CATCGATT TAAGTTCCAG chr3L:13994136-13994256 49 2.88e-04 AACCGATTAA TACCGATG TTTTTCACGG chr2R:17723250-17723370 8 3.30e-04 TCGCGAC AATCGATT AACGGACAAC chr3R:10413178-10413298 101 3.30e-04 CATCATATTG CACCGATA TGTCGAGGGA chr2R:18614985-18615105 49 3.30e-04 ATAGACTGCT AATCGATT ATTAGCAGCT chr2R:23843256-23843376 76 3.30e-04 AGCTTTAGCG AATCGATT GGTCGCTGTT chr3R:11412517-11412637 22 3.30e-04 CCTTTTTAAA AATCGATT ACTATCCAAT chr2L:19034571-19034691 47 3.69e-04 CCCTAGGTGT TATCGATC ACTATCGAAT chr2L:4387042-4387162 40 3.69e-04 ACCTGTCCGC TATCGATC TCAATGCTAT chr3L:4283781-4283901 61 3.69e-04 TTTAGACGTA TATCGATC AGTTCACATC chr3L:3055011-3055131 19 3.69e-04 TGCCGCCGAT AACCGATA ACGAAGCACT chr2R:21386203-21386323 40 3.69e-04 ATTTTCTAAT AACCGATA ACAGTGGTGT chr2R:18411558-18411678 9 3.69e-04 CGATTATC AACCGATA TTTCACTTAC chr2R:7709491-7709611 45 3.69e-04 TATTGCAGCA AACCGATA AATCAGAATG chrX:5941973-5942093 67 3.88e-04 GGTGGGATGT TTTCGATG GGTTTAGAGC chr3R:25122820-25122940 13 3.88e-04 GGACAGAGAA TTTCGATG GCAACGCATC chr3R:14655639-14655759 6 3.88e-04 GTAAT TTTCGATG AAGTCGGGCT chrX:15484597-15484717 17 4.07e-04 CCAATAGCTT CTTCGATA GTGCGACAAT chr2R:24603507-24603627 46 4.07e-04 ATTGAGGCTG CTTCGATA ACGATACCGA chr2L:10405106-10405226 85 4.07e-04 AATGCTACGT CTTCGATA TGAGTTATTT chrX:13194389-13194509 61 4.07e-04 TTTAGTACAG CTTCGATA TATTAGTGCG chr3R:5219529-5219649 97 4.46e-04 GCACGGCTGC TATCGCTA TCGGCGGGCC chrX:17143176-17143296 56 5.27e-04 AGTGATGCCA GATCGATG GAGTATCGCA chr2L:20734864-20734984 20 5.27e-04 TCGCCTTTTT CATCGAAA CTCAGTGCTA chrX:22443670-22443790 100 5.27e-04 aAAAAACGAT TACCGATT ACATGCCTGA chr3L:20028947-20029067 73 5.27e-04 AATTGTACAT ATTCGATA AGATCAGTGC chrX:11888289-11888409 26 5.66e-04 CATATGAGAC TATCGACA TCAGCGTAGG chr3L:12118431-12118551 27 6.04e-04 AAATCGTGCG CACCGATG GTGCCATAAT chrX:19746033-19746153 96 6.04e-04 GCCCGAAACG AATCGAAA CAATAACACA chr2R:14770795-14770915 73 6.04e-04 CGCCCTTCAC AATCGAAA TCCACTGCCA chr2L:8449542-8449662 6 6.04e-04 ACAAC AATCGAAA CAGCTGTTCG chrX:2698456-2698576 59 6.46e-04 CTCCTTATCC AACCGATG GAAGGCAACT chr2L:8030226-8030346 94 6.46e-04 TTCTCTATGT TTTCGATT GTTGGCGAGT chr3R:5659048-5659168 28 6.46e-04 TCGGGTGTGC AACCGATG TCATTAACTA chr2L:5532177-5532297 112 6.46e-04 ACTATCGAGT TTTCGATT A chrX:7074434-7074554 21 7.19e-04 AGCGTGCTGT TATCGAAT CCACAGTGCT chr3L:22072166-22072286 13 7.19e-04 ATAGTTTTTC TTCCGATA ACATAGAAAT chr2L:10517217-10517337 83 7.19e-04 CACCACTAAC TATCGAAT GGCTGCTCGA chr3L:11626577-11626697 50 7.71e-04 AAAGTTGGTG GATCGATT CCTGAAACCG chr3R:17687007-17687127 80 8.88e-04 CGAGAGGACT TATCGACG TAGAAATTGG chr3L:20427612-20427732 87 8.88e-04 CTCGATAGTC CACCGATT AAAACCAGAA chrX:23097471-23097591 55 9.54e-04 TCCAATCAGT CGTCGATA TCTAAGCAGC chr3L:8966729-8966849 53 9.54e-04 CTGCCAACCC AATCGAAG TCGAAGAAGT chrX:12018160-12018280 111 9.93e-04 GCCGATATGC TATCGGTA GC chr2R:23396662-23396782 11 1.06e-03 GATGTGCTCC AGTCGATA GGATCCACCC chr3R:5554245-5554365 74 1.06e-03 ACTGACAAGC AATCGACA CATTCAAGCA chrX:18101892-18102012 73 1.06e-03 CGATAGCTGT AGTCGATA GTGCCGAACA chr3R:24805215-24805335 94 1.11e-03 TCGATATATA GTTCGATA GCCGGCCACT chrX:15574508-15574628 59 1.14e-03 ACAACAGTGA TATCGCTT AAGTCACTAC chr4:1033020-1033140 98 1.30e-03 CCATGGATGG TACCGAAG GCTTGGTTCG chr2R:12514973-12515093 74 1.39e-03 GGCGAAAGAA ATCCGATA GCCGCTTATG chrX:5317296-5317416 111 1.50e-03 CATTGGCGGC TATCGAAC GT chrX:16587187-16587307 27 1.64e-03 CGAGGAGCGA TTCCGATT GGACTGAATG chrX:10082465-10082585 83 1.70e-03 TGCATCCATA TATCGCAA GCACCCTAGA chr2R:10885166-10885286 56 1.70e-03 AACTGGCAGT TATCGCAA TGCTCCCATC chrX:2713956-2714076 76 1.80e-03 CAAAAGTTTT CTCCGATG TTTTTCATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:4232301-4232421 2.9e-05 49_[+1]_63 chr2R:23939709-23939829 2.9e-05 60_[+1]_52 chrX:10595964-10596084 2.9e-05 83_[+1]_29 chrX:17852649-17852769 2.9e-05 65_[+1]_47 chr2R:23972397-23972517 2.9e-05 22_[+1]_90 chrX:2180821-2180941 2.9e-05 10_[+1]_102 chrX:12763610-12763730 2.9e-05 33_[+1]_79 chr3L:17024239-17024359 2.9e-05 91_[+1]_21 chrX:15482283-15482403 2.9e-05 38_[+1]_74 chr2L:560335-560455 2.9e-05 79_[+1]_33 chr4:1231779-1231899 2.9e-05 75_[+1]_37 chr3R:19644988-19645108 2.9e-05 26_[+1]_86 chrX:15802961-15803081 2.9e-05 36_[+1]_76 chr2L:16879377-16879497 2.9e-05 46_[+1]_66 chr2R:9882313-9882433 2.9e-05 100_[+1]_12 chr2L:10435972-10436092 2.9e-05 16_[+1]_96 chrX:5695152-5695272 2.9e-05 49_[+1]_63 chr3L:15816848-15816968 2.9e-05 105_[+1]_7 chr2L:19064864-19064984 2.9e-05 3_[+1]_109 chr2R:22420306-22420426 2.9e-05 64_[+1]_48 chr2L:10396608-10396728 2.9e-05 104_[+1]_8 chr3R:16651089-16651209 2.9e-05 77_[+1]_35 chr2R:7711978-7712098 2.9e-05 90_[+1]_22 chrX:1664969-1665089 2.9e-05 69_[+1]_43 chr2R:17669337-17669457 2.9e-05 13_[+1]_99 chr3R:30806594-30806714 2.9e-05 [+1]_112 chr3R:16652287-16652407 2.9e-05 90_[+1]_22 chr3L:12417507-12417627 2.9e-05 106_[+1]_6 chr2L:10743890-10744010 2.9e-05 73_[+1]_39 chrX:1773633-1773753 2.9e-05 32_[+1]_80 chr3R:15832642-15832762 2.9e-05 48_[+1]_64 chr3R:24234902-24235022 2.9e-05 22_[+1]_90 chr2L:20065654-20065774 2.9e-05 46_[+1]_66 chr3R:24661804-24661924 2.9e-05 58_[+1]_54 chrX:5873303-5873423 2.9e-05 37_[+1]_75 chr3R:4390265-4390385 2.9e-05 64_[+1]_48 chrX:11092381-11092501 2.9e-05 96_[+1]_16 chr2L:5720984-5721104 2.9e-05 41_[+1]_71 chr3R:10708292-10708412 2.9e-05 82_[+1]_30 chr3L:13011703-13011823 2.9e-05 41_[+1]_71 chrX:13285620-13285740 2.9e-05 21_[+1]_91 chr2L:9893355-9893475 2.9e-05 73_[+1]_39 chr2L:4847662-4847782 2.9e-05 60_[+1]_52 chrX:13212279-13212399 2.9e-05 33_[+1]_79 chr3L:22288144-22288264 2.9e-05 79_[+1]_33 chr3L:3937950-3938070 2.9e-05 85_[+1]_27 chr2L:5271292-5271412 2.9e-05 110_[+1]_2 chr2R:20262816-20262936 2.9e-05 86_[+1]_26 chr3L:174662-174782 2.9e-05 27_[+1]_85 chr3L:14006924-14007044 2.9e-05 74_[+1]_38 chr2R:5760786-5760906 2.9e-05 35_[+1]_77 chr3L:4406027-4406147 2.9e-05 87_[+1]_25 chrX:13154938-13155058 2.9e-05 63_[+1]_49 chr3R:15361635-15361755 2.9e-05 48_[+1]_64 chr3L:20361534-20361654 2.9e-05 76_[+1]_36 chr2L:19756887-19757007 2.9e-05 52_[+1]_60 chrX:13718244-13718364 2.9e-05 90_[+1]_22 chrX:5691141-5691261 2.9e-05 59_[+1]_53 chrX:9163179-9163299 2.9e-05 31_[+1]_81 chrX:9159943-9160063 2.9e-05 35_[+1]_77 chr3R:10407263-10407383 2.9e-05 108_[+1]_4 chr2L:15271958-15272078 2.9e-05 96_[+1]_16 chr2R:8167876-8167996 2.9e-05 15_[+1]_97 chr2L:3145665-3145785 2.9e-05 90_[+1]_22 chrX:13285820-13285940 2.9e-05 27_[+1]_85 chrX:13091050-13091170 2.9e-05 65_[+1]_47 chrX:6090209-6090329 2.9e-05 63_[+1]_49 chr3R:11749410-11749530 2.9e-05 62_[+1]_50 chr2L:5278946-5279066 2.9e-05 56_[+1]_56 chr3R:16484158-16484278 2.9e-05 78_[+1]_34 chrX:17579207-17579327 2.9e-05 21_[+1]_91 chr3L:3162081-3162201 2.9e-05 38_[+1]_74 chrX:19664497-19664617 2.9e-05 48_[+1]_64 chrX:11129028-11129148 2.9e-05 84_[+1]_28 chr3R:22381247-22381367 2.9e-05 51_[+1]_61 chrX:15292962-15293082 2.9e-05 63_[+1]_49 chrX:3948949-3949069 2.9e-05 7_[+1]_105 chrX:6261033-6261153 2.9e-05 64_[+1]_48 chr2L:10483209-10483329 2.9e-05 58_[+1]_54 chr3L:5897379-5897499 2.9e-05 49_[+1]_63 chr2R:8939816-8939936 2.9e-05 83_[+1]_29 chr2L:10230573-10230693 4.8e-05 98_[+1]_14 chr3L:8449343-8449463 4.8e-05 60_[+1]_52 chrX:6037738-6037858 4.8e-05 49_[+1]_63 chr3R:9763130-9763250 4.8e-05 38_[+1]_74 chr2R:11844187-11844307 4.8e-05 55_[+1]_57 chrX:8489726-8489846 4.8e-05 38_[+1]_74 chr3R:29835054-29835174 4.8e-05 56_[+1]_56 chrX:8240574-8240694 4.8e-05 58_[+1]_54 chr3L:19836496-19836616 4.8e-05 50_[+1]_62 chr4:481919-482039 4.8e-05 44_[+1]_68 chr2L:2969621-2969741 4.8e-05 62_[+1]_50 chr2L:10728887-10729007 4.8e-05 52_[+1]_60 chrX:12017957-12018077 4.8e-05 69_[+1]_43 chr2L:8305529-8305649 4.8e-05 30_[+1]_82 chr3L:13486296-13486416 4.8e-05 34_[+1]_78 chr3R:21360076-21360196 6.8e-05 72_[+1]_40 chr3R:27116648-27116768 6.8e-05 78_[+1]_34 chr3L:3192474-3192594 6.8e-05 34_[+1]_78 chrX:127363-127483 6.8e-05 39_[+1]_73 chrX:4931149-4931269 6.8e-05 94_[+1]_18 chr3R:11437686-11437806 6.8e-05 22_[+1]_90 chrX:4936209-4936329 6.8e-05 5_[+1]_107 chrX:23007632-23007752 6.8e-05 100_[+1]_12 chrX:9556528-9556648 6.8e-05 6_[+1]_106 chrX:17078746-17078866 6.8e-05 62_[+1]_50 chrX:9273286-9273406 6.8e-05 86_[+1]_26 chrX:9085859-9085979 6.8e-05 34_[+1]_78 chr2R:17670008-17670128 6.8e-05 38_[+1]_74 chr2L:8220666-8220786 6.8e-05 89_[+1]_23 chrX:18090470-18090590 6.8e-05 47_[+1]_65 chrX:15796172-15796292 9.7e-05 101_[+1]_11 chrX:4686867-4686987 9.7e-05 70_[+1]_42 chr2L:19041782-19041902 9.7e-05 77_[+1]_35 chrX:23105880-23106000 9.7e-05 110_[+1]_2 chrX:9162049-9162169 9.7e-05 12_[+1]_100 chr3L:11825690-11825810 9.7e-05 38_[+1]_74 chr2R:18094870-18094990 9.7e-05 64_[+1]_48 chr3R:12456483-12456603 9.7e-05 31_[+1]_81 chr2R:17056789-17056909 9.7e-05 92_[+1]_20 chr3L:21441369-21441489 9.7e-05 36_[+1]_76 chr2R:22185924-22186044 9.7e-05 53_[+1]_59 chrX:15345099-15345219 9.7e-05 78_[+1]_34 chr3L:11626376-11626496 9.7e-05 12_[+1]_100 chr3R:8217887-8218007 9.7e-05 34_[+1]_78 chr2L:13000585-13000705 9.7e-05 95_[+1]_17 chr3L:12118230-12118350 9.7e-05 17_[+1]_95 chr2R:13552411-13552531 9.7e-05 55_[+1]_57 chr2R:17786059-17786179 9.7e-05 13_[+1]_99 chr2R:14601153-14601273 0.00013 57_[+1]_55 chr3R:23053459-23053579 0.00013 88_[+1]_24 chr3L:14942924-14943044 0.00013 10_[+1]_102 chr3R:11407831-11407951 0.00013 40_[+1]_72 chr3R:15363792-15363912 0.00013 98_[+1]_14 chr2L:8302939-8303059 0.00013 96_[+1]_16 chr2L:16825152-16825272 0.00013 69_[+1]_43 chr2R:16142117-16142237 0.00013 54_[+1]_58 chr2L:1982153-1982273 0.00013 26_[+1]_86 chr2L:15038809-15038929 0.00013 69_[+1]_43 chr3L:6955450-6955570 0.00013 68_[+1]_44 chrX:16599135-16599255 0.00013 61_[+1]_51 chr3R:29724884-29725004 0.00013 90_[+1]_22 chr3R:21886935-21887055 0.00016 20_[+1]_92 chr3R:5550597-5550717 0.00016 97_[+1]_15 chrX:18648099-18648219 0.00016 53_[+1]_59 chr3R:15803581-15803701 0.00016 28_[+1]_84 chrX:2727630-2727750 0.00016 47_[+1]_65 chr2R:6648481-6648601 0.00016 105_[+1]_7 chrX:16803323-16803443 0.00016 18_[+1]_94 chr3L:13412756-13412876 0.00016 47_[+1]_65 chrX:13090360-13090480 0.00016 73_[+1]_39 chr2R:15218340-15218460 0.00016 33_[+1]_79 chr2L:6677589-6677709 0.00018 85_[+1]_27 chr2L:1704852-1704972 0.00018 17_[+1]_95 chr2L:11100824-11100944 0.00018 49_[+1]_63 chr2R:17781886-17782006 0.00018 78_[+1]_34 chr2L:10056845-10056965 0.00021 56_[+1]_56 chr3L:9624144-9624264 0.00021 40_[+1]_72 chr2R:16001233-16001353 0.00021 53_[+1]_59 chr3L:20788083-20788203 0.00021 36_[+1]_76 chr2L:19033418-19033538 0.00024 85_[+1]_27 chr3L:20491675-20491795 0.00024 85_[+1]_27 chr2R:19191641-19191761 0.00024 14_[+1]_98 chr2L:6960260-6960380 0.00024 83_[+1]_29 chr2R:10068662-10068782 0.00027 53_[+1]_59 chr3L:18904892-18905012 0.00027 41_[+1]_71 chr3R:10052840-10052960 0.00027 77_[+1]_35 chr3R:22726879-22726999 0.00027 85_[+1]_27 chr3L:13994136-13994256 0.00029 48_[+1]_64 chr2R:17723250-17723370 0.00033 7_[+1]_105 chr3R:10413178-10413298 0.00033 100_[+1]_12 chr2R:18614985-18615105 0.00033 48_[+1]_64 chr2R:23843256-23843376 0.00033 75_[+1]_37 chr3R:11412517-11412637 0.00033 21_[+1]_91 chr2L:19034571-19034691 0.00037 46_[+1]_66 chr2L:4387042-4387162 0.00037 39_[+1]_73 chr3L:4283781-4283901 0.00037 60_[+1]_52 chr3L:3055011-3055131 0.00037 18_[+1]_94 chr2R:21386203-21386323 0.00037 39_[+1]_73 chr2R:18411558-18411678 0.00037 8_[+1]_104 chr2R:7709491-7709611 0.00037 44_[+1]_68 chrX:5941973-5942093 0.00039 66_[+1]_46 chr3R:25122820-25122940 0.00039 12_[+1]_100 chr3R:14655639-14655759 0.00039 5_[+1]_107 chrX:15484597-15484717 0.00041 16_[+1]_96 chr2R:24603507-24603627 0.00041 45_[+1]_67 chr2L:10405106-10405226 0.00041 84_[+1]_28 chrX:13194389-13194509 0.00041 60_[+1]_52 chr3R:5219529-5219649 0.00045 96_[+1]_16 chrX:17143176-17143296 0.00053 55_[+1]_57 chr2L:20734864-20734984 0.00053 19_[+1]_93 chrX:22443670-22443790 0.00053 99_[+1]_13 chr3L:20028947-20029067 0.00053 72_[+1]_40 chrX:11888289-11888409 0.00057 25_[+1]_87 chr3L:12118431-12118551 0.0006 26_[+1]_86 chrX:19746033-19746153 0.0006 95_[+1]_17 chr2R:14770795-14770915 0.0006 72_[+1]_40 chr2L:8449542-8449662 0.0006 5_[+1]_107 chrX:2698456-2698576 0.00065 58_[+1]_54 chr2L:8030226-8030346 0.00065 93_[+1]_19 chr3R:5659048-5659168 0.00065 27_[+1]_85 chr2L:5532177-5532297 0.00065 111_[+1]_1 chrX:7074434-7074554 0.00072 20_[+1]_92 chr3L:22072166-22072286 0.00072 12_[+1]_100 chr2L:10517217-10517337 0.00072 82_[+1]_30 chr3L:11626577-11626697 0.00077 49_[+1]_63 chr3R:17687007-17687127 0.00089 79_[+1]_33 chr3L:20427612-20427732 0.00089 86_[+1]_26 chrX:23097471-23097591 0.00095 54_[+1]_58 chr3L:8966729-8966849 0.00095 52_[+1]_60 chrX:12018160-12018280 0.00099 110_[+1]_2 chr2R:23396662-23396782 0.0011 10_[+1]_102 chr3R:5554245-5554365 0.0011 73_[+1]_39 chrX:18101892-18102012 0.0011 72_[+1]_40 chr3R:24805215-24805335 0.0011 93_[+1]_19 chrX:15574508-15574628 0.0011 58_[+1]_54 chr4:1033020-1033140 0.0013 97_[+1]_15 chr2R:12514973-12515093 0.0014 73_[+1]_39 chrX:5317296-5317416 0.0015 110_[+1]_2 chrX:16587187-16587307 0.0016 26_[+1]_86 chrX:10082465-10082585 0.0017 82_[+1]_30 chr2R:10885166-10885286 0.0017 55_[+1]_57 chrX:2713956-2714076 0.0018 75_[+1]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=223 chr3R:4232301-4232421 ( 50) TATCGATA 1 chr2R:23939709-23939829 ( 61) TATCGATA 1 chrX:10595964-10596084 ( 84) TATCGATA 1 chrX:17852649-17852769 ( 66) TATCGATA 1 chr2R:23972397-23972517 ( 23) TATCGATA 1 chrX:2180821-2180941 ( 11) TATCGATA 1 chrX:12763610-12763730 ( 34) TATCGATA 1 chr3L:17024239-17024359 ( 92) TATCGATA 1 chrX:15482283-15482403 ( 39) TATCGATA 1 chr2L:560335-560455 ( 80) TATCGATA 1 chr4:1231779-1231899 ( 76) TATCGATA 1 chr3R:19644988-19645108 ( 27) TATCGATA 1 chrX:15802961-15803081 ( 37) TATCGATA 1 chr2L:16879377-16879497 ( 47) TATCGATA 1 chr2R:9882313-9882433 ( 101) TATCGATA 1 chr2L:10435972-10436092 ( 17) TATCGATA 1 chrX:5695152-5695272 ( 50) TATCGATA 1 chr3L:15816848-15816968 ( 106) TATCGATA 1 chr2L:19064864-19064984 ( 4) TATCGATA 1 chr2R:22420306-22420426 ( 65) TATCGATA 1 chr2L:10396608-10396728 ( 105) TATCGATA 1 chr3R:16651089-16651209 ( 78) TATCGATA 1 chr2R:7711978-7712098 ( 91) TATCGATA 1 chrX:1664969-1665089 ( 70) TATCGATA 1 chr2R:17669337-17669457 ( 14) TATCGATA 1 chr3R:30806594-30806714 ( 1) TATCGATA 1 chr3R:16652287-16652407 ( 91) TATCGATA 1 chr3L:12417507-12417627 ( 107) TATCGATA 1 chr2L:10743890-10744010 ( 74) TATCGATA 1 chrX:1773633-1773753 ( 33) TATCGATA 1 chr3R:15832642-15832762 ( 49) TATCGATA 1 chr3R:24234902-24235022 ( 23) TATCGATA 1 chr2L:20065654-20065774 ( 47) TATCGATA 1 chr3R:24661804-24661924 ( 59) TATCGATA 1 chrX:5873303-5873423 ( 38) TATCGATA 1 chr3R:4390265-4390385 ( 65) TATCGATA 1 chrX:11092381-11092501 ( 97) TATCGATA 1 chr2L:5720984-5721104 ( 42) TATCGATA 1 chr3R:10708292-10708412 ( 83) TATCGATA 1 chr3L:13011703-13011823 ( 42) TATCGATA 1 chrX:13285620-13285740 ( 22) TATCGATA 1 chr2L:9893355-9893475 ( 74) TATCGATA 1 chr2L:4847662-4847782 ( 61) TATCGATA 1 chrX:13212279-13212399 ( 34) TATCGATA 1 chr3L:22288144-22288264 ( 80) TATCGATA 1 chr3L:3937950-3938070 ( 86) TATCGATA 1 chr2L:5271292-5271412 ( 111) TATCGATA 1 chr2R:20262816-20262936 ( 87) TATCGATA 1 chr3L:174662-174782 ( 28) TATCGATA 1 chr3L:14006924-14007044 ( 75) TATCGATA 1 chr2R:5760786-5760906 ( 36) TATCGATA 1 chr3L:4406027-4406147 ( 88) TATCGATA 1 chrX:13154938-13155058 ( 64) TATCGATA 1 chr3R:15361635-15361755 ( 49) TATCGATA 1 chr3L:20361534-20361654 ( 77) TATCGATA 1 chr2L:19756887-19757007 ( 53) TATCGATA 1 chrX:13718244-13718364 ( 91) TATCGATA 1 chrX:5691141-5691261 ( 60) TATCGATA 1 chrX:9163179-9163299 ( 32) TATCGATA 1 chrX:9159943-9160063 ( 36) TATCGATA 1 chr3R:10407263-10407383 ( 109) TATCGATA 1 chr2L:15271958-15272078 ( 97) TATCGATA 1 chr2R:8167876-8167996 ( 16) TATCGATA 1 chr2L:3145665-3145785 ( 91) TATCGATA 1 chrX:13285820-13285940 ( 28) TATCGATA 1 chrX:13091050-13091170 ( 66) TATCGATA 1 chrX:6090209-6090329 ( 64) TATCGATA 1 chr3R:11749410-11749530 ( 63) TATCGATA 1 chr2L:5278946-5279066 ( 57) TATCGATA 1 chr3R:16484158-16484278 ( 79) TATCGATA 1 chrX:17579207-17579327 ( 22) TATCGATA 1 chr3L:3162081-3162201 ( 39) TATCGATA 1 chrX:19664497-19664617 ( 49) TATCGATA 1 chrX:11129028-11129148 ( 85) TATCGATA 1 chr3R:22381247-22381367 ( 52) TATCGATA 1 chrX:15292962-15293082 ( 64) TATCGATA 1 chrX:3948949-3949069 ( 8) TATCGATA 1 chrX:6261033-6261153 ( 65) TATCGATA 1 chr2L:10483209-10483329 ( 59) TATCGATA 1 chr3L:5897379-5897499 ( 50) TATCGATA 1 chr2R:8939816-8939936 ( 84) TATCGATA 1 chr2L:10230573-10230693 ( 99) TATCGATG 1 chr3L:8449343-8449463 ( 61) TATCGATG 1 chrX:6037738-6037858 ( 50) TATCGATG 1 chr3R:9763130-9763250 ( 39) TATCGATG 1 chr2R:11844187-11844307 ( 56) TATCGATG 1 chrX:8489726-8489846 ( 39) TATCGATG 1 chr3R:29835054-29835174 ( 57) TATCGATG 1 chrX:8240574-8240694 ( 59) TATCGATG 1 chr3L:19836496-19836616 ( 51) TATCGATG 1 chr4:481919-482039 ( 45) TATCGATG 1 chr2L:2969621-2969741 ( 63) TATCGATG 1 chr2L:10728887-10729007 ( 53) TATCGATG 1 chrX:12017957-12018077 ( 70) TATCGATG 1 chr2L:8305529-8305649 ( 31) TATCGATG 1 chr3L:13486296-13486416 ( 35) TATCGATG 1 chr3R:21360076-21360196 ( 73) CATCGATA 1 chr3R:27116648-27116768 ( 79) CATCGATA 1 chr3L:3192474-3192594 ( 35) CATCGATA 1 chrX:127363-127483 ( 40) CATCGATA 1 chrX:4931149-4931269 ( 95) CATCGATA 1 chr3R:11437686-11437806 ( 23) CATCGATA 1 chrX:4936209-4936329 ( 6) CATCGATA 1 chrX:23007632-23007752 ( 101) CATCGATA 1 chrX:9556528-9556648 ( 7) CATCGATA 1 chrX:17078746-17078866 ( 63) CATCGATA 1 chrX:9273286-9273406 ( 87) CATCGATA 1 chrX:9085859-9085979 ( 35) CATCGATA 1 chr2R:17670008-17670128 ( 39) CATCGATA 1 chr2L:8220666-8220786 ( 90) CATCGATA 1 chrX:18090470-18090590 ( 48) CATCGATA 1 chrX:15796172-15796292 ( 102) AATCGATA 1 chrX:4686867-4686987 ( 71) AATCGATA 1 chr2L:19041782-19041902 ( 78) AATCGATA 1 chrX:23105880-23106000 ( 111) AATCGATA 1 chrX:9162049-9162169 ( 13) AATCGATA 1 chr3L:11825690-11825810 ( 39) AATCGATA 1 chr2R:18094870-18094990 ( 65) AATCGATA 1 chr3R:12456483-12456603 ( 32) AATCGATA 1 chr2R:17056789-17056909 ( 93) AATCGATA 1 chr3L:21441369-21441489 ( 37) AATCGATA 1 chr2R:22185924-22186044 ( 54) AATCGATA 1 chrX:15345099-15345219 ( 79) AATCGATA 1 chr3L:11626376-11626496 ( 13) AATCGATA 1 chr3R:8217887-8218007 ( 35) AATCGATA 1 chr2L:13000585-13000705 ( 96) AATCGATA 1 chr3L:12118230-12118350 ( 18) AATCGATA 1 chr2R:13552411-13552531 ( 56) AATCGATA 1 chr2R:17786059-17786179 ( 14) AATCGATA 1 chr2R:14601153-14601273 ( 58) TATCGATT 1 chr3R:23053459-23053579 ( 89) TATCGATT 1 chr3L:14942924-14943044 ( 11) TATCGATT 1 chr3R:11407831-11407951 ( 41) TATCGATT 1 chr3R:15363792-15363912 ( 99) TATCGATT 1 chr2L:8302939-8303059 ( 97) TATCGATT 1 chr2L:16825152-16825272 ( 70) TATCGATT 1 chr2R:16142117-16142237 ( 55) TATCGATT 1 chr2L:1982153-1982273 ( 27) TATCGATT 1 chr2L:15038809-15038929 ( 70) TATCGATT 1 chr3L:6955450-6955570 ( 69) TATCGATT 1 chrX:16599135-16599255 ( 62) TATCGATT 1 chr3R:29724884-29725004 ( 91) TATCGATT 1 chr3R:21886935-21887055 ( 21) TACCGATA 1 chr3R:5550597-5550717 ( 98) TACCGATA 1 chrX:18648099-18648219 ( 54) CATCGATG 1 chr3R:15803581-15803701 ( 29) TACCGATA 1 chrX:2727630-2727750 ( 48) CATCGATG 1 chr2R:6648481-6648601 ( 106) CATCGATG 1 chrX:16803323-16803443 ( 19) CATCGATG 1 chr3L:13412756-13412876 ( 48) CATCGATG 1 chrX:13090360-13090480 ( 74) CATCGATG 1 chr2R:15218340-15218460 ( 34) CATCGATG 1 chr2L:6677589-6677709 ( 86) AATCGATG 1 chr2L:1704852-1704972 ( 18) AATCGATG 1 chr2L:11100824-11100944 ( 50) AATCGATG 1 chr2R:17781886-17782006 ( 79) AATCGATG 1 chr2L:10056845-10056965 ( 57) TTTCGATA 1 chr3L:9624144-9624264 ( 41) TTTCGATA 1 chr2R:16001233-16001353 ( 54) TTTCGATA 1 chr3L:20788083-20788203 ( 37) TTTCGATA 1 chr2L:19033418-19033538 ( 86) TATCGAAA 1 chr3L:20491675-20491795 ( 86) TATCGAAA 1 chr2R:19191641-19191761 ( 15) TATCGAAA 1 chr2L:6960260-6960380 ( 84) TATCGAAA 1 chr2R:10068662-10068782 ( 54) GATCGATA 1 chr3L:18904892-18905012 ( 42) GATCGATA 1 chr3R:10052840-10052960 ( 78) GATCGATA 1 chr3R:22726879-22726999 ( 86) CATCGATT 1 chr3L:13994136-13994256 ( 49) TACCGATG 1 chr2R:17723250-17723370 ( 8) AATCGATT 1 chr3R:10413178-10413298 ( 101) CACCGATA 1 chr2R:18614985-18615105 ( 49) AATCGATT 1 chr2R:23843256-23843376 ( 76) AATCGATT 1 chr3R:11412517-11412637 ( 22) AATCGATT 1 chr2L:19034571-19034691 ( 47) TATCGATC 1 chr2L:4387042-4387162 ( 40) TATCGATC 1 chr3L:4283781-4283901 ( 61) TATCGATC 1 chr3L:3055011-3055131 ( 19) AACCGATA 1 chr2R:21386203-21386323 ( 40) AACCGATA 1 chr2R:18411558-18411678 ( 9) AACCGATA 1 chr2R:7709491-7709611 ( 45) AACCGATA 1 chrX:5941973-5942093 ( 67) TTTCGATG 1 chr3R:25122820-25122940 ( 13) TTTCGATG 1 chr3R:14655639-14655759 ( 6) TTTCGATG 1 chrX:15484597-15484717 ( 17) CTTCGATA 1 chr2R:24603507-24603627 ( 46) CTTCGATA 1 chr2L:10405106-10405226 ( 85) CTTCGATA 1 chrX:13194389-13194509 ( 61) CTTCGATA 1 chr3R:5219529-5219649 ( 97) TATCGCTA 1 chrX:17143176-17143296 ( 56) GATCGATG 1 chr2L:20734864-20734984 ( 20) CATCGAAA 1 chrX:22443670-22443790 ( 100) TACCGATT 1 chr3L:20028947-20029067 ( 73) ATTCGATA 1 chrX:11888289-11888409 ( 26) TATCGACA 1 chr3L:12118431-12118551 ( 27) CACCGATG 1 chrX:19746033-19746153 ( 96) AATCGAAA 1 chr2R:14770795-14770915 ( 73) AATCGAAA 1 chr2L:8449542-8449662 ( 6) AATCGAAA 1 chrX:2698456-2698576 ( 59) AACCGATG 1 chr2L:8030226-8030346 ( 94) TTTCGATT 1 chr3R:5659048-5659168 ( 28) AACCGATG 1 chr2L:5532177-5532297 ( 112) TTTCGATT 1 chrX:7074434-7074554 ( 21) TATCGAAT 1 chr3L:22072166-22072286 ( 13) TTCCGATA 1 chr2L:10517217-10517337 ( 83) TATCGAAT 1 chr3L:11626577-11626697 ( 50) GATCGATT 1 chr3R:17687007-17687127 ( 80) TATCGACG 1 chr3L:20427612-20427732 ( 87) CACCGATT 1 chrX:23097471-23097591 ( 55) CGTCGATA 1 chr3L:8966729-8966849 ( 53) AATCGAAG 1 chrX:12018160-12018280 ( 111) TATCGGTA 1 chr2R:23396662-23396782 ( 11) AGTCGATA 1 chr3R:5554245-5554365 ( 74) AATCGACA 1 chrX:18101892-18102012 ( 73) AGTCGATA 1 chr3R:24805215-24805335 ( 94) GTTCGATA 1 chrX:15574508-15574628 ( 59) TATCGCTT 1 chr4:1033020-1033140 ( 98) TACCGAAG 1 chr2R:12514973-12515093 ( 74) ATCCGATA 1 chrX:5317296-5317416 ( 111) TATCGAAC 1 chrX:16587187-16587307 ( 27) TTCCGATT 1 chrX:10082465-10082585 ( 83) TATCGCAA 1 chr2R:10885166-10885286 ( 56) TATCGCAA 1 chrX:2713956-2714076 ( 76) CTCCGATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.57876 E= 7.5e-225 -72 -43 -291 111 158 -1444 -390 -180 -1444 -123 -1444 162 -1444 233 -1444 -1444 -1444 -1444 231 -1444 169 -347 -549 -1444 -217 -389 -1444 163 119 -347 -24 -129 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 223 E= 7.5e-225 0.183857 0.147982 0.026906 0.641256 0.901345 0.000000 0.013453 0.085202 0.000000 0.085202 0.000000 0.914798 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.977578 0.017937 0.004484 0.000000 0.067265 0.013453 0.000000 0.919283 0.690583 0.017937 0.170404 0.121076 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 regular expression -------------------------------------------------------------------------------- TATCGATA -------------------------------------------------------------------------------- Time 7.29 secs. ******************************************************************************** ******************************************************************************** MOTIF TAGAGATG MEME-2 width = 8 sites = 76 llr = 656 E-value = 5.6e-044 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 Description -------------------------------------------------------------------------------- Simplified A :a:6:7:: pos.-specific C 1::1:1:: probability G ::a2a2:a matrix T 9::2::a: bits 2.3 * * * 2.1 * * * 1.9 * * ** 1.6 ** * ** Relative 1.4 *** * ** Entropy 1.2 *** * ** (12.5 bits) 0.9 *** * ** 0.7 *** **** 0.5 *** **** 0.2 ******** 0.0 -------- Multilevel TAGAGATG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:23939709-23939829 74 2.00e-05 CGATAGCTCC TAGAGATG GCGTGTGGTG chr2L:16879377-16879497 30 2.00e-05 CGCGGCAATG TAGAGATG TGAGCTAACT chr3R:7093683-7093803 31 2.00e-05 CATTTATTTT TAGAGATG GGATTATTGC chrX:5317296-5317416 54 2.00e-05 AGCTAGACGC TAGAGATG GCAAATGCGC chr3R:15832642-15832762 15 2.00e-05 CGCTTTTAAA TAGAGATG ATACCTATAT chr3L:8304107-8304227 59 2.00e-05 AACACTATTT TAGAGATG CACTAAGAAT chr3L:4367465-4367585 2 2.00e-05 C TAGAGATG GTCGTTGAGA chrX:10082465-10082585 19 2.00e-05 GCTTGAAAAC TAGAGATG GAACTGTCAG chr3L:14006924-14007044 53 2.00e-05 TCCTGGATAA TAGAGATG AGCTCCTTAA chrX:8906152-8906272 86 2.00e-05 AGGCTGAAGC TAGAGATG AGCGCTTCGC chr3L:4607131-4607251 8 2.00e-05 CGTTGGT TAGAGATG GAAATGTTTA chr3R:5659048-5659168 89 2.00e-05 TCATCACCTC TAGAGATG GTGACGGAGT chr2R:6648481-6648601 45 2.00e-05 CGATGCGCAG TAGAGATG GAAAAACATC chr2L:5532177-5532297 32 2.00e-05 TCTCGTCCGC TAGAGATG CACCAAAAAT chr2R:10068662-10068782 37 2.00e-05 AATATTTAAT TAGAGATG GAAGTTCTAG chr2L:6960260-6960380 54 2.00e-05 GCCTCTGCGC TAGAGATG GCAGCTCATT chr3L:18904892-18905012 13 2.00e-05 ACCGATAATC TAGAGATG GACAATGTGA chr3R:10052840-10052960 37 2.00e-05 CGGCCATAGT TAGAGATG TGCAGTCTTC chrX:15574508-15574628 30 2.00e-05 ACATTAGTGT TAGAGATG GACAAATATG chrX:16640381-16640501 14 2.00e-05 GACCGCAAGC TAGAGATG TCACTATTGA chr2R:14601153-14601273 44 3.34e-05 GTGTGGCTAT TAGAGGTG GAACCGTATC chr4:1033020-1033140 43 3.34e-05 CGGCTCGTGC TAGAGGTG GCCCAGCACT chrX:5941973-5942093 53 3.34e-05 TGCTGCGAGC TAGAGGTG GGATGTTTTC chrX:8101975-8102095 102 3.34e-05 CCTTTTAATG TAGAGGTG GGGCATGCCG chrX:4931149-4931269 65 3.34e-05 GAAAATCGAC TAGAGGTG GTGGAGAAAC chr2L:11100824-11100944 21 3.34e-05 CGCAAAACCA TAGAGGTG TGTAGCGGCG chr3L:20427612-20427732 49 3.34e-05 CGTGGAACTT TAGAGGTG GCAGATATTC chr2L:8220666-8220786 39 3.34e-05 GAATTTCAAC TAGAGGTG GCATCAGGCG chr2L:13000585-13000705 23 3.34e-05 ACACGTCAAC TAGAGGTG ACCAATAGCT chrX:18090470-18090590 22 3.34e-05 CAATCTGACT TAGAGGTG GAGAAACATC chrX:16587187-16587307 109 4.68e-05 TATAATATAA TAGGGATG GAAC chrX:11092381-11092501 89 4.68e-05 AATTGGGCTC TAGGGATG TATCGATATG chr3R:14655639-14655759 84 4.68e-05 TCGGGCGAAC TAGGGATG TGACAAATTT chr3R:10708292-10708412 61 4.68e-05 GCTGACCGGC TAGGGATG TGAAAGTATG chr2L:9893355-9893475 103 4.68e-05 GGGTGGAAAA TAGGGATG ACAATTGGGC chr2R:20262816-20262936 49 4.68e-05 ATGAGCGGGA TAGGGATG TGAAAAGCCA chr2L:8302939-8303059 46 4.68e-05 CAACTCAATT TAGGGATG ACACTTCTCC chr3R:29724884-29725004 39 4.68e-05 CCGCGCAAAT TAGGGATG GCACACAGTG chr3L:20028947-20029067 54 4.68e-05 CAAGTTTTTC TAGGGATG GAATTGTACA chr3R:11749410-11749530 48 4.68e-05 GCCAACGCAA TAGGGATG AGCGTTGTAT chr3R:9763130-9763250 13 9.29e-05 ATTTGTATAC TAGAGCTG CAAAAAAATC chr3R:25122820-25122940 101 9.29e-05 GGCCGACTGC TAGAGCTG GTAGTGACCT chr3R:5550597-5550717 32 9.29e-05 ATTTTGGCAC TAGTGATG CCACTGGTCG chr2R:16001233-16001353 40 9.29e-05 TTTCTTTAGC TAGCGATG GCCAAGTTTC chr3L:22288144-22288264 42 9.29e-05 GTTTTCGCGT TAGTGATG ACCAATGGGC chr2L:5271292-5271412 85 9.29e-05 GTGTGCCCGA TAGAGCTG GAAGAAACAT chrX:1900155-1900275 11 9.29e-05 GAAACCCAAC TAGCGATG GCCTGCTGCT chr3R:29835054-29835174 11 9.29e-05 CTGTTCATAT TAGTGATG TCACGGCACA chr3L:4406027-4406147 38 9.29e-05 GTGTTTTTGC TAGAGCTG GAAAACTGCC chrX:13718244-13718364 36 9.29e-05 GGGTGATCTC TAGTGATG GCAGCTCCTA chrX:9159943-9160063 18 9.29e-05 AACAGCTGAT TAGAGCTG GCCTGCTGGC chr3R:10407263-10407383 10 9.29e-05 TGCAACCGC TAGAGCTG GAACAAAAAT chr2L:15271958-15272078 40 9.29e-05 TAGGTTTTAA TAGCGATG GGCGACAAAA chr3L:6955450-6955570 42 9.29e-05 ACGTCGTCAA TAGAGCTG TGGAAAAAAT chr2L:3145665-3145785 63 9.29e-05 CTAACGCAGT TAGCGATG TCACTGGCAG chr2R:19191641-19191761 83 9.29e-05 TCATCTCTAT TAGCGATG GCAAAGTCAA chr3R:16484158-16484278 42 9.29e-05 TGACCAAGGT TAGTGATG GTACAAATAC chr3L:3162081-3162201 113 9.29e-05 ATCGGTGGTG TAGTGATG chrX:11129028-11129148 51 9.29e-05 GTCACTTGCC TAGCGATG GCAGCGCGCT chrX:13090360-13090480 43 9.29e-05 GCGTGTACAA TAGTGATG TAAAAAAACA chr2R:20667260-20667380 53 1.37e-04 CGGTCACACC TAGCGGTG CACCTGCGAG chr3L:8449343-8449463 29 1.37e-04 AAATAAACAA TAGTGGTG GTGCGTCGGT chr3R:24805215-24805335 52 1.37e-04 AGCGAAAAAG TAGTGGTG GGCGAAAGGT chr2L:19756887-19757007 28 1.37e-04 GGAGCGCACT TAGCGGTG GGGCCACAGT chr2R:13552411-13552531 30 1.46e-04 AAGTTTTGGC TAGGGCTG TCAATAAGTC chr3R:21886935-21887055 53 1.68e-04 ACTTTCGAAG TAGTGCTG AAAAAAGTTC chr3R:5219529-5219649 51 1.77e-04 CACGACTTAT CAGAGGTG GGACATTTAA chr3R:5554245-5554365 40 1.77e-04 AATATTGTAC CAGAGGTG GCAGGCCAAC chr3L:20788083-20788203 51 1.86e-04 GATAGGCTTT CAGGGATG TCACTATCGC chrX:2180821-2180941 43 2.17e-04 TCAGCTGGCG CAGTGATG GGCAGGTGTA chr2L:4387042-4387162 20 2.17e-04 CTCGAGCGGC CAGTGATG ACACCTGTCC chr2R:17056789-17056909 70 2.17e-04 GTGCTAGTGC CAGTGATG GCATCGATTC chr2R:23843256-23843376 31 2.17e-04 AAGAGCTTTC CAGCGATG GTATCAACTG chrX:15345099-15345219 61 2.17e-04 CGCACCGTAA CAGAGCTG TTAATGCTGT chr3L:12417507-12417627 31 2.36e-04 CACTTGGAAT TGGAGATG AGCTGACCAC chr2R:17781886-17782006 26 2.36e-04 AACAGCTGTG TGGAGATG GGAGGTATGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:23939709-23939829 2e-05 73_[+2]_39 chr2L:16879377-16879497 2e-05 29_[+2]_83 chr3R:7093683-7093803 2e-05 30_[+2]_82 chrX:5317296-5317416 2e-05 53_[+2]_59 chr3R:15832642-15832762 2e-05 14_[+2]_98 chr3L:8304107-8304227 2e-05 58_[+2]_54 chr3L:4367465-4367585 2e-05 1_[+2]_111 chrX:10082465-10082585 2e-05 18_[+2]_94 chr3L:14006924-14007044 2e-05 52_[+2]_60 chrX:8906152-8906272 2e-05 85_[+2]_27 chr3L:4607131-4607251 2e-05 7_[+2]_105 chr3R:5659048-5659168 2e-05 88_[+2]_24 chr2R:6648481-6648601 2e-05 44_[+2]_68 chr2L:5532177-5532297 2e-05 31_[+2]_81 chr2R:10068662-10068782 2e-05 36_[+2]_76 chr2L:6960260-6960380 2e-05 53_[+2]_59 chr3L:18904892-18905012 2e-05 12_[+2]_100 chr3R:10052840-10052960 2e-05 36_[+2]_76 chrX:15574508-15574628 2e-05 29_[+2]_83 chrX:16640381-16640501 2e-05 13_[+2]_99 chr2R:14601153-14601273 3.3e-05 43_[+2]_69 chr4:1033020-1033140 3.3e-05 42_[+2]_70 chrX:5941973-5942093 3.3e-05 52_[+2]_60 chrX:8101975-8102095 3.3e-05 101_[+2]_11 chrX:4931149-4931269 3.3e-05 64_[+2]_48 chr2L:11100824-11100944 3.3e-05 20_[+2]_92 chr3L:20427612-20427732 3.3e-05 48_[+2]_64 chr2L:8220666-8220786 3.3e-05 38_[+2]_74 chr2L:13000585-13000705 3.3e-05 22_[+2]_90 chrX:18090470-18090590 3.3e-05 21_[+2]_91 chrX:16587187-16587307 4.7e-05 108_[+2]_4 chrX:11092381-11092501 4.7e-05 88_[+2]_24 chr3R:14655639-14655759 4.7e-05 83_[+2]_29 chr3R:10708292-10708412 4.7e-05 60_[+2]_52 chr2L:9893355-9893475 4.7e-05 102_[+2]_10 chr2R:20262816-20262936 4.7e-05 48_[+2]_64 chr2L:8302939-8303059 4.7e-05 45_[+2]_67 chr3R:29724884-29725004 4.7e-05 38_[+2]_74 chr3L:20028947-20029067 4.7e-05 53_[+2]_59 chr3R:11749410-11749530 4.7e-05 47_[+2]_65 chr3R:9763130-9763250 9.3e-05 12_[+2]_100 chr3R:25122820-25122940 9.3e-05 100_[+2]_12 chr3R:5550597-5550717 9.3e-05 31_[+2]_81 chr2R:16001233-16001353 9.3e-05 39_[+2]_73 chr3L:22288144-22288264 9.3e-05 41_[+2]_71 chr2L:5271292-5271412 9.3e-05 84_[+2]_28 chrX:1900155-1900275 9.3e-05 10_[+2]_102 chr3R:29835054-29835174 9.3e-05 10_[+2]_102 chr3L:4406027-4406147 9.3e-05 37_[+2]_75 chrX:13718244-13718364 9.3e-05 35_[+2]_77 chrX:9159943-9160063 9.3e-05 17_[+2]_95 chr3R:10407263-10407383 9.3e-05 9_[+2]_103 chr2L:15271958-15272078 9.3e-05 39_[+2]_73 chr3L:6955450-6955570 9.3e-05 41_[+2]_71 chr2L:3145665-3145785 9.3e-05 62_[+2]_50 chr2R:19191641-19191761 9.3e-05 82_[+2]_30 chr3R:16484158-16484278 9.3e-05 41_[+2]_71 chr3L:3162081-3162201 9.3e-05 112_[+2] chrX:11129028-11129148 9.3e-05 50_[+2]_62 chrX:13090360-13090480 9.3e-05 42_[+2]_70 chr2R:20667260-20667380 0.00014 52_[+2]_60 chr3L:8449343-8449463 0.00014 28_[+2]_84 chr3R:24805215-24805335 0.00014 51_[+2]_61 chr2L:19756887-19757007 0.00014 27_[+2]_85 chr2R:13552411-13552531 0.00015 29_[+2]_83 chr3R:21886935-21887055 0.00017 52_[+2]_60 chr3R:5219529-5219649 0.00018 50_[+2]_62 chr3R:5554245-5554365 0.00018 39_[+2]_73 chr3L:20788083-20788203 0.00019 50_[+2]_62 chrX:2180821-2180941 0.00022 42_[+2]_70 chr2L:4387042-4387162 0.00022 19_[+2]_93 chr2R:17056789-17056909 0.00022 69_[+2]_43 chr2R:23843256-23843376 0.00022 30_[+2]_82 chrX:15345099-15345219 0.00022 60_[+2]_52 chr3L:12417507-12417627 0.00024 30_[+2]_82 chr2R:17781886-17782006 0.00024 25_[+2]_87 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAGAGATG width=8 seqs=76 chr2R:23939709-23939829 ( 74) TAGAGATG 1 chr2L:16879377-16879497 ( 30) TAGAGATG 1 chr3R:7093683-7093803 ( 31) TAGAGATG 1 chrX:5317296-5317416 ( 54) TAGAGATG 1 chr3R:15832642-15832762 ( 15) TAGAGATG 1 chr3L:8304107-8304227 ( 59) TAGAGATG 1 chr3L:4367465-4367585 ( 2) TAGAGATG 1 chrX:10082465-10082585 ( 19) TAGAGATG 1 chr3L:14006924-14007044 ( 53) TAGAGATG 1 chrX:8906152-8906272 ( 86) TAGAGATG 1 chr3L:4607131-4607251 ( 8) TAGAGATG 1 chr3R:5659048-5659168 ( 89) TAGAGATG 1 chr2R:6648481-6648601 ( 45) TAGAGATG 1 chr2L:5532177-5532297 ( 32) TAGAGATG 1 chr2R:10068662-10068782 ( 37) TAGAGATG 1 chr2L:6960260-6960380 ( 54) TAGAGATG 1 chr3L:18904892-18905012 ( 13) TAGAGATG 1 chr3R:10052840-10052960 ( 37) TAGAGATG 1 chrX:15574508-15574628 ( 30) TAGAGATG 1 chrX:16640381-16640501 ( 14) TAGAGATG 1 chr2R:14601153-14601273 ( 44) TAGAGGTG 1 chr4:1033020-1033140 ( 43) TAGAGGTG 1 chrX:5941973-5942093 ( 53) TAGAGGTG 1 chrX:8101975-8102095 ( 102) TAGAGGTG 1 chrX:4931149-4931269 ( 65) TAGAGGTG 1 chr2L:11100824-11100944 ( 21) TAGAGGTG 1 chr3L:20427612-20427732 ( 49) TAGAGGTG 1 chr2L:8220666-8220786 ( 39) TAGAGGTG 1 chr2L:13000585-13000705 ( 23) TAGAGGTG 1 chrX:18090470-18090590 ( 22) TAGAGGTG 1 chrX:16587187-16587307 ( 109) TAGGGATG 1 chrX:11092381-11092501 ( 89) TAGGGATG 1 chr3R:14655639-14655759 ( 84) TAGGGATG 1 chr3R:10708292-10708412 ( 61) TAGGGATG 1 chr2L:9893355-9893475 ( 103) TAGGGATG 1 chr2R:20262816-20262936 ( 49) TAGGGATG 1 chr2L:8302939-8303059 ( 46) TAGGGATG 1 chr3R:29724884-29725004 ( 39) TAGGGATG 1 chr3L:20028947-20029067 ( 54) TAGGGATG 1 chr3R:11749410-11749530 ( 48) TAGGGATG 1 chr3R:9763130-9763250 ( 13) TAGAGCTG 1 chr3R:25122820-25122940 ( 101) TAGAGCTG 1 chr3R:5550597-5550717 ( 32) TAGTGATG 1 chr2R:16001233-16001353 ( 40) TAGCGATG 1 chr3L:22288144-22288264 ( 42) TAGTGATG 1 chr2L:5271292-5271412 ( 85) TAGAGCTG 1 chrX:1900155-1900275 ( 11) TAGCGATG 1 chr3R:29835054-29835174 ( 11) TAGTGATG 1 chr3L:4406027-4406147 ( 38) TAGAGCTG 1 chrX:13718244-13718364 ( 36) TAGTGATG 1 chrX:9159943-9160063 ( 18) TAGAGCTG 1 chr3R:10407263-10407383 ( 10) TAGAGCTG 1 chr2L:15271958-15272078 ( 40) TAGCGATG 1 chr3L:6955450-6955570 ( 42) TAGAGCTG 1 chr2L:3145665-3145785 ( 63) TAGCGATG 1 chr2R:19191641-19191761 ( 83) TAGCGATG 1 chr3R:16484158-16484278 ( 42) TAGTGATG 1 chr3L:3162081-3162201 ( 113) TAGTGATG 1 chrX:11129028-11129148 ( 51) TAGCGATG 1 chrX:13090360-13090480 ( 43) TAGTGATG 1 chr2R:20667260-20667380 ( 53) TAGCGGTG 1 chr3L:8449343-8449463 ( 29) TAGTGGTG 1 chr3R:24805215-24805335 ( 52) TAGTGGTG 1 chr2L:19756887-19757007 ( 28) TAGCGGTG 1 chr2R:13552411-13552531 ( 30) TAGGGCTG 1 chr3R:21886935-21887055 ( 53) TAGTGCTG 1 chr3R:5219529-5219649 ( 51) CAGAGGTG 1 chr3R:5554245-5554365 ( 40) CAGAGGTG 1 chr3L:20788083-20788203 ( 51) CAGGGATG 1 chrX:2180821-2180941 ( 43) CAGTGATG 1 chr2L:4387042-4387162 ( 20) CAGTGATG 1 chr2R:17056789-17056909 ( 70) CAGTGATG 1 chr2R:23843256-23843376 ( 31) CAGCGATG 1 chrX:15345099-15345219 ( 61) CAGAGCTG 1 chr3L:12417507-12417627 ( 31) TGGAGATG 1 chr2R:17781886-17782006 ( 26) TGGAGATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.72946 E= 5.6e-044 -1289 -92 -1289 159 169 -1289 -294 -1289 -1289 -1289 231 -1289 87 -75 -35 -80 -1289 -1289 231 -1289 112 -60 6 -1289 -1289 -1289 -1289 175 -1289 -1289 231 -1289 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 76 E= 5.6e-044 0.000000 0.105263 0.000000 0.894737 0.973684 0.000000 0.026316 0.000000 0.000000 0.000000 1.000000 0.000000 0.552632 0.118421 0.157895 0.171053 0.000000 0.000000 1.000000 0.000000 0.657895 0.131579 0.210526 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAGAGATG MEME-2 regular expression -------------------------------------------------------------------------------- TAGAG[AG]TG -------------------------------------------------------------------------------- Time 13.62 secs. ******************************************************************************** ******************************************************************************** MOTIF CATCTCTA MEME-3 width = 8 sites = 73 llr = 631 E-value = 8.3e-041 ******************************************************************************** -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a::2::8 pos.-specific C a:2a2a:: probability G ::2:1::2 matrix T ::6:6:a: bits 2.3 * * * 2.1 * * * 1.9 * * ** 1.6 ** * ** Relative 1.4 ** * ** Entropy 1.2 ** * *** (12.5 bits) 0.9 ** * *** 0.7 **** *** 0.5 **** *** 0.2 ******** 0.0 -------- Multilevel CATCTCTA consensus C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:5332407-5332527 41 1.88e-05 TGCGATGGTC CATCTCTA GCAGAAATTC chrX:15482283-15482403 73 1.88e-05 CCACACTTTT CATCTCTA TCAATAGTTC chrX:7074434-7074554 88 1.88e-05 AAAAAGATCC CATCTCTA TGAAAACGAC chr3R:31738367-31738487 83 1.88e-05 AATCCTGTGC CATCTCTA GGTCGGAATC chr3L:4283781-4283901 75 1.88e-05 GATCAGTTCA CATCTCTA TCTTGTCTGT chr2R:17456432-17456552 46 1.88e-05 ACTGACAGTG CATCTCTA ATATTGAACA chr3L:4367465-4367585 59 1.88e-05 GTTAACATGC CATCTCTA GCAGCGCTGT chrX:11888289-11888409 84 1.88e-05 TTTGCTTGTC CATCTCTA AACACCACGT chr2R:19191641-19191761 74 1.88e-05 CTCACGCTCT CATCTCTA TTAGCGATGG chr2L:10728887-10729007 105 1.88e-05 GGTGTTTTAC CATCTCTA TGGACATT chr3R:7644459-7644579 47 1.88e-05 GGAAATAAAC CATCTCTA AAAGTTTGGT chr2R:10885166-10885286 70 1.88e-05 GCAATGCTCC CATCTCTA TGAGGCATGT chr3L:11626376-11626496 68 1.88e-05 CCTGACCTAC CATCTCTA ATTTTGCCGC chr3L:12118230-12118350 39 1.88e-05 AGCTGCTGCC CATCTCTA GGCACATTTT chr2R:15218340-15218460 48 1.88e-05 GATGTTTCTC CATCTCTA GCTGAAACTC chr2R:17786059-17786179 84 1.88e-05 GAGCTTTTTC CATCTCTA TTGTGTCGCA chr3L:19845186-19845306 60 3.14e-05 ACACTTGGGC CACCTCTA ATCAGCTGAG chr2R:17723250-17723370 56 3.14e-05 GTATGAATTC CACCTCTA ACACCAGAGA chr3R:4390265-4390385 104 3.14e-05 ATTTGTTGGA CACCTCTA GTGTTCGAC chrX:127363-127483 67 3.14e-05 GTGGCTAGTC CACCTCTA ACGTCCACAT chrX:13212279-13212399 65 3.14e-05 CTTTTTCTTC CACCTCTA GCACCACATG chrX:18648099-18648219 79 3.14e-05 TGTTGGCATC CACCTCTA GCATTTCGAC chr3R:11437686-11437806 75 3.14e-05 ATTTTACATC CACCTCTA gtttttcgtt chrX:4936209-4936329 78 3.14e-05 GATGTTTCTC CACCTCTA AAACCGACGC chr2R:16142117-16142237 93 3.14e-05 TTGCAACTTT CACCTCTA GGCTTGAAAT chrX:17078746-17078866 89 3.14e-05 GATGTTTCGG CACCTCTA TTAAAAACTC chr2L:2969621-2969741 85 3.14e-05 CCGGTTATAT CACCTCTA GCGATTTTTA chrX:15292962-15293082 93 3.14e-05 GACATTAACC CACCTCTA ATGTATCGCA chr3R:21360076-21360196 94 4.43e-05 TAGTGAGTGC CAGCTCTA AAGTACAGTG chr2R:18094870-18094990 100 4.43e-05 ATTTCAGTTC CAGCTCTA ATAAATTACA chr2L:20734864-20734984 62 4.43e-05 ACATTCGTTT CAGCTCTA TTTCAAATCG chr2L:1704852-1704972 70 4.43e-05 GGCTGTGTTC CAGCTCTA GCACACCATA chrX:12018160-12018280 61 4.43e-05 CCTATACTTT CAGCTCTA GCTGGAGCGG chr2L:8305529-8305649 66 4.43e-05 TTCTTATTTC CAGCTCTA GAATGAATGT chr2L:8220666-8220786 81 4.43e-05 CGATAACACG CAGCTCTA ACATCGATAT chr3R:22726879-22726999 101 4.43e-05 ATTTAAGTTC CAGCTCTA TGAGGGAAGC chr3R:19644988-19645108 48 6.95e-05 CCGATAGTGT CATCTCTG TCCTAGAAGT chr2R:17669337-17669457 38 6.95e-05 TTTTTTCTCA CATCTCTG AAACCTTTTC chr2L:5720984-5721104 68 6.95e-05 AATTTAGGGC CATCCCTA TTGTCAATGG chr2R:5760786-5760906 74 6.95e-05 CATTCTTGTC CATCCCTA TCCAGCATCT chr2R:14771616-14771736 95 6.95e-05 CGCCGGCGCC CATCTCTG GGTTATGATA chrX:9163179-9163299 67 6.95e-05 ATATATCTAT CATCCCTA GCTGCACTGC chr3L:1756256-1756376 59 6.95e-05 AGGCAAGTGC CATCTCTG CTAGTTGGAC chr3R:27938469-27938589 94 6.95e-05 GTGGGGCGGC CATCCCTA GCGTAAACAT chrX:9085859-9085979 85 6.95e-05 TGACAACTGT CATCCCTA ATAGCGTGCA chr2R:17670008-17670128 59 6.95e-05 CTGTGTCCCA CATCTCTG ATAGCTTATC chr3L:3162081-3162201 64 6.95e-05 TGGTTTTTCA CATCCCTA TCGCAATCTT chr2L:10483209-10483329 89 6.95e-05 GGATATGTGT CATCTCTG TCGGACATCT chr2R:7709491-7709611 79 6.95e-05 TGGTCGCTTC CATCCCTA GAAACCATGT chrX:2713956-2714076 89 8.86e-05 CGATGTTTTT CATCACTA GCCAGGATTA chr2R:18614985-18615105 76 8.86e-05 TGCGTCGGCT CATCACTA ATCGAATATT chr2L:1982153-1982273 53 8.86e-05 CTAGCCGTGC CATCACTA AAAGCAGTTG chr3R:11412517-11412637 51 8.86e-05 GTAAGTTTGT CATCACTA GTTTCGCACG chr2R:22185924-22186044 39 8.86e-05 GAAGAACTTG CATCACTA GCATGTCAAT chrX:3948949-3949069 40 8.86e-05 ATTTTTTTCA CATCACTA GCTGACAGAA chrX:18101892-18102012 95 8.86e-05 CGAACAGTGC CATCACTA GCCGCTAAAG chr2L:10517217-10517337 73 1.18e-04 GTATGTGGTC CACCACTA ACTATCGAAT chr3L:13412756-13412876 86 1.18e-04 GATCTTAGCC CACCACTA ATCGTCGGCG chr3R:11407831-11407951 80 1.48e-04 GAGATAGGTC CATCGCTA GGACATTGAA chr2L:4387042-4387162 88 1.48e-04 TCTGGCAGCC CAGCTCTG CTATTGACCG chr3L:15816848-15816968 74 1.48e-04 CGACATTAAG CAGCTCTG CATTGTATCG chrX:1773633-1773753 110 1.48e-04 TAACTGCTCA CATCGCTA GAT chr3L:3055011-3055131 45 1.48e-04 CTGTTATTGT CATCGCTA ACCATACCGG chrX:6261033-6261153 98 1.48e-04 ATTGCTGTAC CATCGCTA TGAACTACTA chr3R:16651089-16651209 66 1.57e-04 ATCTGAAAAT CATCCCTG AGTCTATCGA chr2R:24603507-24603627 88 1.57e-04 CGGATTGTCT CATCCCTG CTGCACGCGA chr3R:24234902-24235022 80 1.83e-04 GTCGCATTGG CATCACTG TTCAAACGTC chr2L:19064864-19064984 29 1.97e-04 TAACGTATGT CACCCCTG GCGAGCTACT chr3L:8966729-8966849 75 1.97e-04 AGAAGTGCTT CACCCCTG CGAGCTATCG chrX:15484597-15484717 54 2.05e-04 TTGTTATGAC CACCACtg tgtgtgtagt chr3L:19836496-19836616 80 2.05e-04 TTTTTCGCCC CACCACTG ATATTTTGAT chrX:13091050-13091170 92 2.14e-04 TGCGGCTGGC CAGCGCTA GTGgaaaaga chr2L:10743890-10744010 56 2.37e-04 AAATATCTGG CAGCACTG TCTTAAATGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:5332407-5332527 1.9e-05 40_[+3]_72 chrX:15482283-15482403 1.9e-05 72_[+3]_40 chrX:7074434-7074554 1.9e-05 87_[+3]_25 chr3R:31738367-31738487 1.9e-05 82_[+3]_30 chr3L:4283781-4283901 1.9e-05 74_[+3]_38 chr2R:17456432-17456552 1.9e-05 45_[+3]_67 chr3L:4367465-4367585 1.9e-05 58_[+3]_54 chrX:11888289-11888409 1.9e-05 83_[+3]_29 chr2R:19191641-19191761 1.9e-05 73_[+3]_39 chr2L:10728887-10729007 1.9e-05 104_[+3]_8 chr3R:7644459-7644579 1.9e-05 46_[+3]_66 chr2R:10885166-10885286 1.9e-05 69_[+3]_43 chr3L:11626376-11626496 1.9e-05 67_[+3]_45 chr3L:12118230-12118350 1.9e-05 38_[+3]_74 chr2R:15218340-15218460 1.9e-05 47_[+3]_65 chr2R:17786059-17786179 1.9e-05 83_[+3]_29 chr3L:19845186-19845306 3.1e-05 59_[+3]_53 chr2R:17723250-17723370 3.1e-05 55_[+3]_57 chr3R:4390265-4390385 3.1e-05 103_[+3]_9 chrX:127363-127483 3.1e-05 66_[+3]_46 chrX:13212279-13212399 3.1e-05 64_[+3]_48 chrX:18648099-18648219 3.1e-05 78_[+3]_34 chr3R:11437686-11437806 3.1e-05 74_[+3]_38 chrX:4936209-4936329 3.1e-05 77_[+3]_35 chr2R:16142117-16142237 3.1e-05 92_[+3]_20 chrX:17078746-17078866 3.1e-05 88_[+3]_24 chr2L:2969621-2969741 3.1e-05 84_[+3]_28 chrX:15292962-15293082 3.1e-05 92_[+3]_20 chr3R:21360076-21360196 4.4e-05 93_[+3]_19 chr2R:18094870-18094990 4.4e-05 99_[+3]_13 chr2L:20734864-20734984 4.4e-05 61_[+3]_51 chr2L:1704852-1704972 4.4e-05 69_[+3]_43 chrX:12018160-12018280 4.4e-05 60_[+3]_52 chr2L:8305529-8305649 4.4e-05 65_[+3]_47 chr2L:8220666-8220786 4.4e-05 80_[+3]_32 chr3R:22726879-22726999 4.4e-05 100_[+3]_12 chr3R:19644988-19645108 6.9e-05 47_[+3]_65 chr2R:17669337-17669457 6.9e-05 37_[+3]_75 chr2L:5720984-5721104 6.9e-05 67_[+3]_45 chr2R:5760786-5760906 6.9e-05 73_[+3]_39 chr2R:14771616-14771736 6.9e-05 94_[+3]_18 chrX:9163179-9163299 6.9e-05 66_[+3]_46 chr3L:1756256-1756376 6.9e-05 58_[+3]_54 chr3R:27938469-27938589 6.9e-05 93_[+3]_19 chrX:9085859-9085979 6.9e-05 84_[+3]_28 chr2R:17670008-17670128 6.9e-05 58_[+3]_54 chr3L:3162081-3162201 6.9e-05 63_[+3]_49 chr2L:10483209-10483329 6.9e-05 88_[+3]_24 chr2R:7709491-7709611 6.9e-05 78_[+3]_34 chrX:2713956-2714076 8.9e-05 88_[+3]_24 chr2R:18614985-18615105 8.9e-05 75_[+3]_37 chr2L:1982153-1982273 8.9e-05 52_[+3]_60 chr3R:11412517-11412637 8.9e-05 50_[+3]_62 chr2R:22185924-22186044 8.9e-05 38_[+3]_74 chrX:3948949-3949069 8.9e-05 39_[+3]_73 chrX:18101892-18102012 8.9e-05 94_[+3]_18 chr2L:10517217-10517337 0.00012 72_[+3]_40 chr3L:13412756-13412876 0.00012 85_[+3]_27 chr3R:11407831-11407951 0.00015 79_[+3]_33 chr2L:4387042-4387162 0.00015 87_[+3]_25 chr3L:15816848-15816968 0.00015 73_[+3]_39 chrX:1773633-1773753 0.00015 109_[+3]_3 chr3L:3055011-3055131 0.00015 44_[+3]_68 chrX:6261033-6261153 0.00015 97_[+3]_15 chr3R:16651089-16651209 0.00016 65_[+3]_47 chr2R:24603507-24603627 0.00016 87_[+3]_25 chr3R:24234902-24235022 0.00018 79_[+3]_33 chr2L:19064864-19064984 0.0002 28_[+3]_84 chr3L:8966729-8966849 0.0002 74_[+3]_38 chrX:15484597-15484717 0.00021 53_[+3]_59 chr3L:19836496-19836616 0.00021 79_[+3]_33 chrX:13091050-13091170 0.00021 91_[+3]_21 chr2L:10743890-10744010 0.00024 55_[+3]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CATCTCTA width=8 seqs=73 chrX:5332407-5332527 ( 41) CATCTCTA 1 chrX:15482283-15482403 ( 73) CATCTCTA 1 chrX:7074434-7074554 ( 88) CATCTCTA 1 chr3R:31738367-31738487 ( 83) CATCTCTA 1 chr3L:4283781-4283901 ( 75) CATCTCTA 1 chr2R:17456432-17456552 ( 46) CATCTCTA 1 chr3L:4367465-4367585 ( 59) CATCTCTA 1 chrX:11888289-11888409 ( 84) CATCTCTA 1 chr2R:19191641-19191761 ( 74) CATCTCTA 1 chr2L:10728887-10729007 ( 105) CATCTCTA 1 chr3R:7644459-7644579 ( 47) CATCTCTA 1 chr2R:10885166-10885286 ( 70) CATCTCTA 1 chr3L:11626376-11626496 ( 68) CATCTCTA 1 chr3L:12118230-12118350 ( 39) CATCTCTA 1 chr2R:15218340-15218460 ( 48) CATCTCTA 1 chr2R:17786059-17786179 ( 84) CATCTCTA 1 chr3L:19845186-19845306 ( 60) CACCTCTA 1 chr2R:17723250-17723370 ( 56) CACCTCTA 1 chr3R:4390265-4390385 ( 104) CACCTCTA 1 chrX:127363-127483 ( 67) CACCTCTA 1 chrX:13212279-13212399 ( 65) CACCTCTA 1 chrX:18648099-18648219 ( 79) CACCTCTA 1 chr3R:11437686-11437806 ( 75) CACCTCTA 1 chrX:4936209-4936329 ( 78) CACCTCTA 1 chr2R:16142117-16142237 ( 93) CACCTCTA 1 chrX:17078746-17078866 ( 89) CACCTCTA 1 chr2L:2969621-2969741 ( 85) CACCTCTA 1 chrX:15292962-15293082 ( 93) CACCTCTA 1 chr3R:21360076-21360196 ( 94) CAGCTCTA 1 chr2R:18094870-18094990 ( 100) CAGCTCTA 1 chr2L:20734864-20734984 ( 62) CAGCTCTA 1 chr2L:1704852-1704972 ( 70) CAGCTCTA 1 chrX:12018160-12018280 ( 61) CAGCTCTA 1 chr2L:8305529-8305649 ( 66) CAGCTCTA 1 chr2L:8220666-8220786 ( 81) CAGCTCTA 1 chr3R:22726879-22726999 ( 101) CAGCTCTA 1 chr3R:19644988-19645108 ( 48) CATCTCTG 1 chr2R:17669337-17669457 ( 38) CATCTCTG 1 chr2L:5720984-5721104 ( 68) CATCCCTA 1 chr2R:5760786-5760906 ( 74) CATCCCTA 1 chr2R:14771616-14771736 ( 95) CATCTCTG 1 chrX:9163179-9163299 ( 67) CATCCCTA 1 chr3L:1756256-1756376 ( 59) CATCTCTG 1 chr3R:27938469-27938589 ( 94) CATCCCTA 1 chrX:9085859-9085979 ( 85) CATCCCTA 1 chr2R:17670008-17670128 ( 59) CATCTCTG 1 chr3L:3162081-3162201 ( 64) CATCCCTA 1 chr2L:10483209-10483329 ( 89) CATCTCTG 1 chr2R:7709491-7709611 ( 79) CATCCCTA 1 chrX:2713956-2714076 ( 89) CATCACTA 1 chr2R:18614985-18615105 ( 76) CATCACTA 1 chr2L:1982153-1982273 ( 53) CATCACTA 1 chr3R:11412517-11412637 ( 51) CATCACTA 1 chr2R:22185924-22186044 ( 39) CATCACTA 1 chrX:3948949-3949069 ( 40) CATCACTA 1 chrX:18101892-18102012 ( 95) CATCACTA 1 chr2L:10517217-10517337 ( 73) CACCACTA 1 chr3L:13412756-13412876 ( 86) CACCACTA 1 chr3R:11407831-11407951 ( 80) CATCGCTA 1 chr2L:4387042-4387162 ( 88) CAGCTCTG 1 chr3L:15816848-15816968 ( 74) CAGCTCTG 1 chrX:1773633-1773753 ( 110) CATCGCTA 1 chr3L:3055011-3055131 ( 45) CATCGCTA 1 chrX:6261033-6261153 ( 98) CATCGCTA 1 chr3R:16651089-16651209 ( 66) CATCCCTG 1 chr2R:24603507-24603627 ( 88) CATCCCTG 1 chr3R:24234902-24235022 ( 80) CATCACTG 1 chr2L:19064864-19064984 ( 29) CACCCCTG 1 chr3L:8966729-8966849 ( 75) CACCCCTG 1 chrX:15484597-15484717 ( 54) CACCACTG 1 chr3L:19836496-19836616 ( 80) CACCACTG 1 chrX:13091050-13091170 ( 92) CAGCGCTA 1 chr2L:10743890-10744010 ( 56) CAGCACTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.0085 E= 8.3e-041 -1283 233 -1283 -1283 173 -1283 -1283 -1283 -1283 31 -29 99 -1283 233 -1283 -1283 -76 -40 -156 102 -1283 233 -1283 -1283 -1283 -1283 -1283 175 137 -1283 12 -1283 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 73 E= 8.3e-041 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.246575 0.164384 0.589041 0.000000 1.000000 0.000000 0.000000 0.178082 0.150685 0.068493 0.602740 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.780822 0.000000 0.219178 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATCTCTA MEME-3 regular expression -------------------------------------------------------------------------------- CA[TC]CTCT[AG] -------------------------------------------------------------------------------- Time 19.24 secs. ******************************************************************************** ******************************************************************************** MOTIF MHATCGAT MEME-4 width = 8 sites = 83 llr = 668 E-value = 5.2e-033 ******************************************************************************** -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 Description -------------------------------------------------------------------------------- Simplified A 43a:::a: pos.-specific C 35:2a::: probability G 2::::a:: matrix T 22:8:::a bits 2.3 ** 2.1 ** 1.9 ** * 1.6 * **** Relative 1.4 * **** Entropy 1.2 ****** (11.6 bits) 0.9 ****** 0.7 ****** 0.5 ******* 0.2 ******* 0.0 -------- Multilevel ACATCGAT consensus CA sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:6037738-6037858 63 1.28e-05 CGATGGAAAA CCATCGAT GATTCCTCGA chr4:1231779-1231899 87 1.28e-05 ATCGATAGTT CCATCGAT TTTTTTTGCT chr3L:174662-174782 9 1.28e-05 TAAAAAAG CCATCGAT GGCTTAGTAT chr2L:15271958-15272078 113 1.28e-05 TAGTACTTTT CCATCGAT chr2L:13000585-13000705 113 1.28e-05 ATTTTCTCGC CCATCGAT chr2R:18094870-18094990 38 3.22e-05 TTGCAATATA ACATCGAT GTTTCTTAAC chr3R:30806594-30806714 103 3.22e-05 TGGTATATAA ACATCGAT ATTATACTGA chr2L:20065654-20065774 22 3.22e-05 AAGACCAAAT ACATCGAT TTGTGTACCA chrX:4931149-4931269 81 3.22e-05 TGGTGGAGAA ACATCGAT GCCAAACATC chrX:13285620-13285740 1 3.22e-05 . ACATCGAT ATCTGTTCGA chrX:18648099-18648219 62 3.22e-05 AACATCGATG ACATCGAT GTTGGCATCC chr3R:29835054-29835174 26 3.22e-05 ATGTCACGGC ACATCGAT GCATCGATGT chr3R:11437686-11437806 47 3.22e-05 TCGACATCAT ACATCGAT TGCAGAATTA chr2R:6648481-6648601 58 3.22e-05 AGATGGAAAA ACATCGAT GTTTTCTCGA chr3L:6955450-6955570 103 3.22e-05 TTTTCTGGAA ACATCGAT TGAATTTTCT chrX:16599135-16599255 107 3.22e-05 TATCTGACAA ACATCGAT TTTGGT chrX:17078746-17078866 5 3.22e-05 AAAA ACATCGAT AGTCTGAAAT chr4:481919-482039 56 3.22e-05 ATCGATGAAA ACATCGAT GCATGATTTT chr3L:13412756-13412876 71 3.22e-05 GATGGTGAAA ACATCGAT CTTAGCCCAC chrX:15345099-15345219 2 3.22e-05 A ACATCGAT GTTCGCCAAC chrX:13090360-13090480 58 3.22e-05 ATGTAAAAAA ACATCGAT GCATCAGCCA chrX:6261033-6261153 22 3.22e-05 CGTTGCCAAA ACATCGAT ATGCACACCG chrX:18090470-18090590 35 3.22e-05 AGGTGGAGAA ACATCGAT GACATCATCG chr3L:12417507-12417627 57 4.52e-05 ACTCACGACA GCATCGAT ATACCGAATA chrX:13212279-13212399 43 4.52e-05 CTATCGATAA GCATCGAT TATTCTTTTT chr2R:17056789-17056909 78 4.52e-05 GCCAGTGATG GCATCGAT TCCCTTTAAT chrX:3948949-3949069 22 4.52e-05 GATACCCGAT GCATCGAT ATTTTTTTCA chr2R:13552411-13552531 64 4.52e-05 ATAATCGATA GCATCGAT TTCTTGGCCC chr3R:4232301-4232421 94 6.47e-05 TCAAAGTCAG CAATCGAT ATAATTTATT chrX:4686867-4686987 97 6.47e-05 GACGGGGTTG CAATCGAT GAATGTATTG chr2L:10230573-10230693 86 6.47e-05 TCCGTGGGGA CAATCGAT AAAGGTATCG chrX:15484597-15484717 31 6.47e-05 GATAGTGCGA CAATCGAT CAAATTTGTT chr2L:19041782-19041902 51 6.47e-05 TTGAGCGAAA CAATCGAT ACCTCCAGAT chr3R:27116648-27116768 61 6.47e-05 ATAGCCTACC CAATCGAT AGTAGCCGCT chr2R:11844187-11844307 39 6.47e-05 AAGCTAATCG CAATCGAT TGCAGAACTT chr3R:24661804-24661924 94 6.47e-05 GCTGAGCTTG CAATCGAT GTTATATGCG chrX:127363-127483 86 6.47e-05 CGTCCACATG CAATCGAT AAACGATATT chrX:11092381-11092501 107 6.47e-05 TATCGATATG CAATCGAT GTTTCA chr2R:16142117-16142237 46 6.47e-05 TGCTTGACGT CAATCGAT CTATCGATTA chr2R:22185924-22186044 94 6.47e-05 CGGCTGTCGG CAATCGAT ATCTCCTCTG chr3R:9763130-9763250 26 1.13e-04 AGCTGCAAAA AAATCGAT GTTAGTATCG chr3L:15816848-15816968 40 1.13e-04 CGTAAATTAA AAATCGAT TAATTCAATT chr3R:15832642-15832762 109 1.13e-04 TTAAACTTAT AAATCGAT GTAA chrX:13154938-13155058 45 1.13e-04 AAGCTTTAGA TCATCGAT ACTGCCGGAA chr2R:8167876-8167996 25 1.13e-04 ATATCGATAA AAATCGAT TGTGCAAACT chrX:16803323-16803443 39 1.13e-04 TTTCGAGGAA TCATCGAT TATTTTCTTT chrX:6090209-6090329 14 1.13e-04 GCTGGAACAA AAATCGAT GATTTTTTCG chr2L:8305529-8305649 4 1.13e-04 ATA AAATCGAT ATTTCAGTTT chr2R:9882313-9882433 79 1.32e-04 TCTGGGTCGC CTATCGAT TGCAAATAAA chr3L:11825690-11825810 52 1.32e-04 CGATAGTTTT CTATCGAT TATAAAGCAA chr2L:5278946-5279066 106 1.32e-04 GCCAATGGTT CTATCGAT TGTTTGG chrX:12017957-12018077 45 1.32e-04 TTCTGAGACA CTATCGAT TCTTTTTTTT chr2L:10483209-10483329 40 1.32e-04 GCCCCTAATT CTATCGAT TAGTTGGTTC chr3L:3192474-3192594 21 1.90e-04 TCAGCTGGTG ATATCGAT GGGAGGCATC chr2L:6960260-6960380 101 1.90e-04 ATTTAGCAAC ATATCGAT CTTGGATCAT chr3R:11749410-11749530 78 1.90e-04 ATATGTCAGC ATATCGAT ATGTCTAAGC chr3L:17024239-17024359 40 2.03e-04 TCCATCTGGT ACACCGAT CAACGAAATA chrX:8489726-8489846 47 2.03e-04 TCTATCGATG ACACCGAT AGCGGCATCA chr3L:18904892-18905012 1 2.03e-04 . ACACCGAT AATCTAGAGA chrX:12763610-12763730 96 2.22e-04 TTAAAAATAT GTATCGAT AGTCCGCTTT chrX:1773633-1773753 78 2.22e-04 TACGATGTAA GTATCGAT ATTAGATATT chrX:5873303-5873423 22 2.22e-04 CGGCGGAATT GTATCGAT GCGGGCGTTA chr2L:5720984-5721104 29 2.22e-04 TAGTACTTTT GTATCGAT TTTCTTATCG chr3R:15361635-15361755 15 2.31e-04 TCGGGTCTTA GCACCGAT ATCAGGTGGC chrX:2727630-2727750 62 2.31e-04 GATGACTGCT GCACCGAT AATATCGCAT chr2R:14770795-14770915 3 2.31e-04 CG GCACCGAT GTCTCCACTC chr2R:18614985-18615105 33 2.31e-04 AAGAAGAGCG GCACCGAT AGACTGCTAA chr3R:21360076-21360196 49 2.60e-04 AGAAAAGCAC TAATCGAT AATGTTAGGT chr2L:19064864-19064984 68 2.60e-04 CTTATATGCT TAATCGAT ATCGAGATAT chr2L:8220666-8220786 67 2.60e-04 GACTAGCGAA TAATCGAT AACACGCAGC chr3R:8217887-8218007 6 2.60e-04 TAATC TAATCGAT CTTCTAATGT chr3L:13486296-13486416 2 2.60e-04 C TAATCGAT ACTTTCAATG chrX:15802961-15803081 49 3.01e-04 TCGATAAGTA TTATCGAT GTTCGCATTT chr3L:13994136-13994256 38 3.01e-04 GAAAGCTCTT CAACCGAT TAATACCGAT chr3L:3937950-3938070 60 3.01e-04 AAATAAATAC TTATCGAT ATTGTTCGGC chr3L:20361534-20361654 97 3.01e-04 TTTCTGCTCA TTATCGAT GCTTGCGGTT chr2L:1982153-1982273 10 3.01e-04 TAGAATTTC CAACCGAT ATACAAAGAT chr3R:10407263-10407383 72 3.01e-04 GTAGCATTAG TTATCGAT AAGAACAAAA chr3R:19644988-19645108 35 3.34e-04 GCTATCGATA TCACCGAT AGTGTCATCT chr2R:24603507-24603627 57 3.79e-04 TTCGATAACG ATACCGAT TAGTCAGTGT chr2L:15038809-15038929 12 3.79e-04 GCACCGAACG GAACCGAT TTTTGATTTC chrX:8240574-8240694 26 3.92e-04 TTATTTGTTA GTACCGAT AGTTTTCGAT chr2R:8939816-8939936 61 4.31e-04 CCTGATATGA TTACCGAT TGCACCACCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:6037738-6037858 1.3e-05 62_[+4]_50 chr4:1231779-1231899 1.3e-05 86_[+4]_26 chr3L:174662-174782 1.3e-05 8_[+4]_104 chr2L:15271958-15272078 1.3e-05 112_[+4] chr2L:13000585-13000705 1.3e-05 112_[+4] chr2R:18094870-18094990 3.2e-05 37_[+4]_75 chr3R:30806594-30806714 3.2e-05 102_[+4]_10 chr2L:20065654-20065774 3.2e-05 21_[+4]_91 chrX:4931149-4931269 3.2e-05 80_[+4]_32 chrX:13285620-13285740 3.2e-05 [+4]_112 chrX:18648099-18648219 3.2e-05 61_[+4]_51 chr3R:29835054-29835174 3.2e-05 25_[+4]_87 chr3R:11437686-11437806 3.2e-05 46_[+4]_66 chr2R:6648481-6648601 3.2e-05 57_[+4]_55 chr3L:6955450-6955570 3.2e-05 102_[+4]_10 chrX:16599135-16599255 3.2e-05 106_[+4]_6 chrX:17078746-17078866 3.2e-05 4_[+4]_108 chr4:481919-482039 3.2e-05 55_[+4]_57 chr3L:13412756-13412876 3.2e-05 70_[+4]_42 chrX:15345099-15345219 3.2e-05 1_[+4]_111 chrX:13090360-13090480 3.2e-05 57_[+4]_55 chrX:6261033-6261153 3.2e-05 21_[+4]_91 chrX:18090470-18090590 3.2e-05 34_[+4]_78 chr3L:12417507-12417627 4.5e-05 56_[+4]_56 chrX:13212279-13212399 4.5e-05 42_[+4]_70 chr2R:17056789-17056909 4.5e-05 77_[+4]_35 chrX:3948949-3949069 4.5e-05 21_[+4]_91 chr2R:13552411-13552531 4.5e-05 63_[+4]_49 chr3R:4232301-4232421 6.5e-05 93_[+4]_19 chrX:4686867-4686987 6.5e-05 96_[+4]_16 chr2L:10230573-10230693 6.5e-05 85_[+4]_27 chrX:15484597-15484717 6.5e-05 30_[+4]_82 chr2L:19041782-19041902 6.5e-05 50_[+4]_62 chr3R:27116648-27116768 6.5e-05 60_[+4]_52 chr2R:11844187-11844307 6.5e-05 38_[+4]_74 chr3R:24661804-24661924 6.5e-05 93_[+4]_19 chrX:127363-127483 6.5e-05 85_[+4]_27 chrX:11092381-11092501 6.5e-05 106_[+4]_6 chr2R:16142117-16142237 6.5e-05 45_[+4]_67 chr2R:22185924-22186044 6.5e-05 93_[+4]_19 chr3R:9763130-9763250 0.00011 25_[+4]_87 chr3L:15816848-15816968 0.00011 39_[+4]_73 chr3R:15832642-15832762 0.00011 108_[+4]_4 chrX:13154938-13155058 0.00011 44_[+4]_68 chr2R:8167876-8167996 0.00011 24_[+4]_88 chrX:16803323-16803443 0.00011 38_[+4]_74 chrX:6090209-6090329 0.00011 13_[+4]_99 chr2L:8305529-8305649 0.00011 3_[+4]_109 chr2R:9882313-9882433 0.00013 78_[+4]_34 chr3L:11825690-11825810 0.00013 51_[+4]_61 chr2L:5278946-5279066 0.00013 105_[+4]_7 chrX:12017957-12018077 0.00013 44_[+4]_68 chr2L:10483209-10483329 0.00013 39_[+4]_73 chr3L:3192474-3192594 0.00019 20_[+4]_92 chr2L:6960260-6960380 0.00019 100_[+4]_12 chr3R:11749410-11749530 0.00019 77_[+4]_35 chr3L:17024239-17024359 0.0002 39_[+4]_73 chrX:8489726-8489846 0.0002 46_[+4]_66 chr3L:18904892-18905012 0.0002 [+4]_112 chrX:12763610-12763730 0.00022 95_[+4]_17 chrX:1773633-1773753 0.00022 77_[+4]_35 chrX:5873303-5873423 0.00022 21_[+4]_91 chr2L:5720984-5721104 0.00022 28_[+4]_84 chr3R:15361635-15361755 0.00023 14_[+4]_98 chrX:2727630-2727750 0.00023 61_[+4]_51 chr2R:14770795-14770915 0.00023 2_[+4]_110 chr2R:18614985-18615105 0.00023 32_[+4]_80 chr3R:21360076-21360196 0.00026 48_[+4]_64 chr2L:19064864-19064984 0.00026 67_[+4]_45 chr2L:8220666-8220786 0.00026 66_[+4]_46 chr3R:8217887-8218007 0.00026 5_[+4]_107 chr3L:13486296-13486416 0.00026 1_[+4]_111 chrX:15802961-15803081 0.0003 48_[+4]_64 chr3L:13994136-13994256 0.0003 37_[+4]_75 chr3L:3937950-3938070 0.0003 59_[+4]_53 chr3L:20361534-20361654 0.0003 96_[+4]_16 chr2L:1982153-1982273 0.0003 9_[+4]_103 chr3R:10407263-10407383 0.0003 71_[+4]_41 chr3R:19644988-19645108 0.00033 34_[+4]_78 chr2R:24603507-24603627 0.00038 56_[+4]_56 chr2L:15038809-15038929 0.00038 11_[+4]_101 chrX:8240574-8240694 0.00039 25_[+4]_87 chr2R:8939816-8939936 0.00043 60_[+4]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MHATCGAT width=8 seqs=83 chrX:6037738-6037858 ( 63) CCATCGAT 1 chr4:1231779-1231899 ( 87) CCATCGAT 1 chr3L:174662-174782 ( 9) CCATCGAT 1 chr2L:15271958-15272078 ( 113) CCATCGAT 1 chr2L:13000585-13000705 ( 113) CCATCGAT 1 chr2R:18094870-18094990 ( 38) ACATCGAT 1 chr3R:30806594-30806714 ( 103) ACATCGAT 1 chr2L:20065654-20065774 ( 22) ACATCGAT 1 chrX:4931149-4931269 ( 81) ACATCGAT 1 chrX:13285620-13285740 ( 1) ACATCGAT 1 chrX:18648099-18648219 ( 62) ACATCGAT 1 chr3R:29835054-29835174 ( 26) ACATCGAT 1 chr3R:11437686-11437806 ( 47) ACATCGAT 1 chr2R:6648481-6648601 ( 58) ACATCGAT 1 chr3L:6955450-6955570 ( 103) ACATCGAT 1 chrX:16599135-16599255 ( 107) ACATCGAT 1 chrX:17078746-17078866 ( 5) ACATCGAT 1 chr4:481919-482039 ( 56) ACATCGAT 1 chr3L:13412756-13412876 ( 71) ACATCGAT 1 chrX:15345099-15345219 ( 2) ACATCGAT 1 chrX:13090360-13090480 ( 58) ACATCGAT 1 chrX:6261033-6261153 ( 22) ACATCGAT 1 chrX:18090470-18090590 ( 35) ACATCGAT 1 chr3L:12417507-12417627 ( 57) GCATCGAT 1 chrX:13212279-13212399 ( 43) GCATCGAT 1 chr2R:17056789-17056909 ( 78) GCATCGAT 1 chrX:3948949-3949069 ( 22) GCATCGAT 1 chr2R:13552411-13552531 ( 64) GCATCGAT 1 chr3R:4232301-4232421 ( 94) CAATCGAT 1 chrX:4686867-4686987 ( 97) CAATCGAT 1 chr2L:10230573-10230693 ( 86) CAATCGAT 1 chrX:15484597-15484717 ( 31) CAATCGAT 1 chr2L:19041782-19041902 ( 51) CAATCGAT 1 chr3R:27116648-27116768 ( 61) CAATCGAT 1 chr2R:11844187-11844307 ( 39) CAATCGAT 1 chr3R:24661804-24661924 ( 94) CAATCGAT 1 chrX:127363-127483 ( 86) CAATCGAT 1 chrX:11092381-11092501 ( 107) CAATCGAT 1 chr2R:16142117-16142237 ( 46) CAATCGAT 1 chr2R:22185924-22186044 ( 94) CAATCGAT 1 chr3R:9763130-9763250 ( 26) AAATCGAT 1 chr3L:15816848-15816968 ( 40) AAATCGAT 1 chr3R:15832642-15832762 ( 109) AAATCGAT 1 chrX:13154938-13155058 ( 45) TCATCGAT 1 chr2R:8167876-8167996 ( 25) AAATCGAT 1 chrX:16803323-16803443 ( 39) TCATCGAT 1 chrX:6090209-6090329 ( 14) AAATCGAT 1 chr2L:8305529-8305649 ( 4) AAATCGAT 1 chr2R:9882313-9882433 ( 79) CTATCGAT 1 chr3L:11825690-11825810 ( 52) CTATCGAT 1 chr2L:5278946-5279066 ( 106) CTATCGAT 1 chrX:12017957-12018077 ( 45) CTATCGAT 1 chr2L:10483209-10483329 ( 40) CTATCGAT 1 chr3L:3192474-3192594 ( 21) ATATCGAT 1 chr2L:6960260-6960380 ( 101) ATATCGAT 1 chr3R:11749410-11749530 ( 78) ATATCGAT 1 chr3L:17024239-17024359 ( 40) ACACCGAT 1 chrX:8489726-8489846 ( 47) ACACCGAT 1 chr3L:18904892-18905012 ( 1) ACACCGAT 1 chrX:12763610-12763730 ( 96) GTATCGAT 1 chrX:1773633-1773753 ( 78) GTATCGAT 1 chrX:5873303-5873423 ( 22) GTATCGAT 1 chr2L:5720984-5721104 ( 29) GTATCGAT 1 chr3R:15361635-15361755 ( 15) GCACCGAT 1 chrX:2727630-2727750 ( 62) GCACCGAT 1 chr2R:14770795-14770915 ( 3) GCACCGAT 1 chr2R:18614985-18615105 ( 33) GCACCGAT 1 chr3R:21360076-21360196 ( 49) TAATCGAT 1 chr2L:19064864-19064984 ( 68) TAATCGAT 1 chr2L:8220666-8220786 ( 67) TAATCGAT 1 chr3R:8217887-8218007 ( 6) TAATCGAT 1 chr3L:13486296-13486416 ( 2) TAATCGAT 1 chrX:15802961-15803081 ( 49) TTATCGAT 1 chr3L:13994136-13994256 ( 38) CAACCGAT 1 chr3L:3937950-3938070 ( 60) TTATCGAT 1 chr3L:20361534-20361654 ( 97) TTATCGAT 1 chr2L:1982153-1982273 ( 10) CAACCGAT 1 chr3R:10407263-10407383 ( 72) TTATCGAT 1 chr3R:19644988-19645108 ( 35) TCACCGAT 1 chr2R:24603507-24603627 ( 57) ATACCGAT 1 chr2L:15038809-15038929 ( 12) GAACCGAT 1 chrX:8240574-8240694 ( 26) GTACCGAT 1 chr2R:8939816-8939936 ( 61) TTACCGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.90672 E= 5.2e-033 31 54 -16 -92 5 120 -1302 -38 173 -1302 -1302 -1302 -1302 -24 -1302 149 -1302 233 -1302 -1302 -1302 -1302 231 -1302 173 -1302 -1302 -1302 -1302 -1302 -1302 175 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 83 E= 5.2e-033 0.373494 0.289157 0.180723 0.156627 0.313253 0.457831 0.000000 0.228916 1.000000 0.000000 0.000000 0.000000 0.000000 0.168675 0.000000 0.831325 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MHATCGAT MEME-4 regular expression -------------------------------------------------------------------------------- [AC][CAT]ATCGAT -------------------------------------------------------------------------------- Time 24.81 secs. ******************************************************************************** ******************************************************************************** MOTIF AWCAGCTG MEME-5 width = 8 sites = 24 llr = 229 E-value = 1.5e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 94:a:::: pos.-specific C ::a::a1: probability G 11::a::a matrix T :5::::9: bits 2.3 * ** * 2.1 * ** * 1.9 * ** * 1.6 * ** * Relative 1.4 * ****** Entropy 1.2 * ****** (13.7 bits) 0.9 * ****** 0.7 * ****** 0.5 * ****** 0.2 ******** 0.0 -------- Multilevel ATCAGCTG consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:2180821-2180941 32 1.30e-05 GCAAACTGCA ATCAGCTG GCGCAGTGAT chr3L:19845186-19845306 68 1.30e-05 GCCACCTCTA ATCAGCTG AGCGCCGATG chr2L:5096322-5096442 45 1.30e-05 CAGTGCTAAC ATCAGCTG TTGGGGGCGC chr2L:10517217-10517337 105 1.30e-05 GCTCGATATC ATCAGCTG TCCCAACC chr3R:16652287-16652407 27 1.30e-05 TTGACTCATA ATCAGCTG ATTAGTCATA chr2L:10743890-10744010 15 1.30e-05 AAGATTCTGC ATCAGCTG TTTGAGTTCT chr3L:20361534-20361654 59 1.30e-05 GATGGCAAAT ATCAGCTG TGTCAGTTGT chrX:11888289-11888409 65 1.30e-05 TTGTTGTATC ATCAGCTG CTTTGCTTGT chr2L:16879377-16879497 103 2.62e-05 AGCGCCATAA AACAGCTG TTACAGAAAC chr3R:27116648-27116768 90 2.62e-05 ATCGATAGGC AACAGCTG ATTGAGTGAT chr3R:11407831-11407951 108 2.62e-05 CAGCAACAAA AACAGCTG TTCGT chrX:9159943-9160063 8 2.62e-05 CAAACCA AACAGCTG ATTAGAGCTG chr3L:20028947-20029067 106 2.62e-05 GACAGTTTAA AACAGCTG TATACAT chr2R:17781886-17782006 16 2.62e-05 TGTTTAACAA AACAGCTG TGTGGAGATG chr3R:8217887-8218007 59 2.62e-05 GATACGGGCG AACAGCTG ACTCGTTCCA chrX:15796172-15796292 79 3.51e-05 actaTTCATA AGCAGCTG TTGTGTGCCA chr3R:30806594-30806714 41 3.51e-05 TCTAGGGAGG AGCAGCTG TACTTGGTCT chr2R:18614985-18615105 60 3.51e-05 ATCGATTATT AGCAGCTG CGTCGGCTCA chrX:5695152-5695272 75 5.25e-05 GGTGCGGATA ACCAGCTG TTTTGCTATC chr3L:3192474-3192594 10 6.12e-05 AGTGTTAGC GTCAGCTG GTGATATCGA chr2R:16142117-16142237 67 6.12e-05 TCGATTAACA GTCAGCTG TTTACGTCTT chr2R:14601153-14601273 19 7.00e-05 AGATGAGCGC AACAGCCG CGCACGTGTG chrX:13194389-13194509 18 7.00e-05 AAAAACACGA AACAGCCG GTTAGATATG chr2L:4847662-4847782 75 8.76e-05 GATAGAAAAC ATCGGCTG TTCCTTCAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:2180821-2180941 1.3e-05 31_[+5]_81 chr3L:19845186-19845306 1.3e-05 67_[+5]_45 chr2L:5096322-5096442 1.3e-05 44_[+5]_68 chr2L:10517217-10517337 1.3e-05 104_[+5]_8 chr3R:16652287-16652407 1.3e-05 26_[+5]_86 chr2L:10743890-10744010 1.3e-05 14_[+5]_98 chr3L:20361534-20361654 1.3e-05 58_[+5]_54 chrX:11888289-11888409 1.3e-05 64_[+5]_48 chr2L:16879377-16879497 2.6e-05 102_[+5]_10 chr3R:27116648-27116768 2.6e-05 89_[+5]_23 chr3R:11407831-11407951 2.6e-05 107_[+5]_5 chrX:9159943-9160063 2.6e-05 7_[+5]_105 chr3L:20028947-20029067 2.6e-05 105_[+5]_7 chr2R:17781886-17782006 2.6e-05 15_[+5]_97 chr3R:8217887-8218007 2.6e-05 58_[+5]_54 chrX:15796172-15796292 3.5e-05 78_[+5]_34 chr3R:30806594-30806714 3.5e-05 40_[+5]_72 chr2R:18614985-18615105 3.5e-05 59_[+5]_53 chrX:5695152-5695272 5.2e-05 74_[+5]_38 chr3L:3192474-3192594 6.1e-05 9_[+5]_103 chr2R:16142117-16142237 6.1e-05 66_[+5]_46 chr2R:14601153-14601273 7e-05 18_[+5]_94 chrX:13194389-13194509 7e-05 17_[+5]_95 chr2L:4847662-4847782 8.8e-05 74_[+5]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AWCAGCTG width=8 seqs=24 chrX:2180821-2180941 ( 32) ATCAGCTG 1 chr3L:19845186-19845306 ( 68) ATCAGCTG 1 chr2L:5096322-5096442 ( 45) ATCAGCTG 1 chr2L:10517217-10517337 ( 105) ATCAGCTG 1 chr3R:16652287-16652407 ( 27) ATCAGCTG 1 chr2L:10743890-10744010 ( 15) ATCAGCTG 1 chr3L:20361534-20361654 ( 59) ATCAGCTG 1 chrX:11888289-11888409 ( 65) ATCAGCTG 1 chr2L:16879377-16879497 ( 103) AACAGCTG 1 chr3R:27116648-27116768 ( 90) AACAGCTG 1 chr3R:11407831-11407951 ( 108) AACAGCTG 1 chrX:9159943-9160063 ( 8) AACAGCTG 1 chr3L:20028947-20029067 ( 106) AACAGCTG 1 chr2R:17781886-17782006 ( 16) AACAGCTG 1 chr3R:8217887-8218007 ( 59) AACAGCTG 1 chrX:15796172-15796292 ( 79) AGCAGCTG 1 chr3R:30806594-30806714 ( 41) AGCAGCTG 1 chr2R:18614985-18615105 ( 60) AGCAGCTG 1 chrX:5695152-5695272 ( 75) ACCAGCTG 1 chr3L:3192474-3192594 ( 10) GTCAGCTG 1 chr2R:16142117-16142237 ( 67) GTCAGCTG 1 chr2R:14601153-14601273 ( 19) AACAGCCG 1 chrX:13194389-13194509 ( 18) AACAGCCG 1 chr2L:4847662-4847782 ( 75) ATCGGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.85841 E= 1.5e-002 160 -1123 -127 -1123 31 -226 -69 63 -1123 233 -1123 -1123 166 -1123 -227 -1123 -1123 -1123 231 -1123 -1123 233 -1123 -1123 -1123 -126 -1123 163 -1123 -1123 231 -1123 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 24 E= 1.5e-002 0.916667 0.000000 0.083333 0.000000 0.375000 0.041667 0.125000 0.458333 0.000000 1.000000 0.000000 0.000000 0.958333 0.000000 0.041667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.083333 0.000000 0.916667 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-5 regular expression -------------------------------------------------------------------------------- A[TA]CAGCTG -------------------------------------------------------------------------------- Time 30.23 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:17786059-17786179 7.51e-04 13_[+1(9.73e-05)]_62_[+3(1.88e-05)]_\ 29 chr2R:8939816-8939936 8.16e-03 83_[+1(2.90e-05)]_29 chr3L:20788083-20788203 1.55e-03 120 chr2R:15218340-15218460 8.45e-05 32_[+4(4.52e-05)]_7_[+3(1.88e-05)]_\ 65 chr2R:7709491-7709611 5.40e-04 78_[+3(6.95e-05)]_34 chrX:18101892-18102012 1.86e-02 94_[+3(8.86e-05)]_18 chr3L:5897379-5897499 3.27e-04 49_[+1(2.90e-05)]_63 chrX:18090470-18090590 1.46e-04 21_[+2(3.34e-05)]_5_[+4(3.22e-05)]_\ 5_[+1(6.78e-05)]_26_[+4(4.52e-05)]_31 chr2R:13552411-13552531 4.86e-04 55_[+1(9.73e-05)]_[+4(4.52e-05)]_49 chr2L:10483209-10483329 7.28e-05 58_[+1(2.90e-05)]_22_[+3(6.95e-05)]_\ 24 chrX:6261033-6261153 2.60e-04 21_[+4(3.22e-05)]_35_[+1(2.90e-05)]_\ 48 chrX:13090360-13090480 8.48e-05 42_[+2(9.29e-05)]_7_[+4(3.22e-05)]_\ 7_[+4(1.28e-05)]_40 chr3L:12118230-12118350 2.77e-05 17_[+1(9.73e-05)]_13_[+3(1.88e-05)]_\ 74 chrX:3948949-3949069 9.86e-05 7_[+1(2.90e-05)]_6_[+4(4.52e-05)]_\ 10_[+3(8.86e-05)]_73 chr2L:13000585-13000705 7.26e-05 22_[+2(3.34e-05)]_65_[+1(9.73e-05)]_\ 9_[+4(1.28e-05)] chrX:16640381-16640501 2.09e-02 13_[+2(2.00e-05)]_99 chrX:15292962-15293082 2.05e-04 63_[+1(2.90e-05)]_21_[+3(3.14e-05)]_\ 20 chr3R:22726879-22726999 6.23e-04 84_[+4(3.22e-05)]_8_[+3(4.43e-05)]_\ 12 chr3L:13486296-13486416 6.64e-03 2_[+1(9.73e-05)]_24_[+1(4.84e-05)]_\ 78 chrX:15574508-15574628 1.54e-02 29_[+2(2.00e-05)]_83 chr3R:22381247-22381367 1.47e-03 51_[+1(2.90e-05)]_61 chr3R:8217887-8218007 2.09e-04 34_[+1(9.73e-05)]_16_[+5(2.62e-05)]_\ 54 chrX:11129028-11129148 4.85e-04 50_[+2(9.29e-05)]_26_[+1(2.90e-05)]_\ 28 chrX:19664497-19664617 2.13e-03 48_[+1(2.90e-05)]_64 chr2R:17781886-17782006 2.60e-05 15_[+5(2.62e-05)]_54_[+4(6.47e-05)]_\ 35 chr2L:8220666-8220786 1.11e-06 38_[+2(3.34e-05)]_21_[+1(9.73e-05)]_\ 5_[+3(4.43e-05)]_[+4(3.22e-05)]_24 chr2L:8305529-8305649 8.58e-05 4_[+1(9.73e-05)]_18_[+1(4.84e-05)]_\ 27_[+3(4.43e-05)]_47 chr3L:3162081-3162201 3.09e-05 38_[+1(2.90e-05)]_17_[+3(6.95e-05)]_\ 41_[+2(9.29e-05)] chr3L:11626376-11626496 2.22e-04 11_[+4(6.47e-05)]_48_[+3(1.88e-05)]_\ 45 chrX:17579207-17579327 3.26e-03 21_[+1(2.90e-05)]_91 chr3R:10052840-10052960 2.05e-04 36_[+2(2.00e-05)]_76 chr2R:17670008-17670128 2.63e-04 37_[+4(3.22e-05)]_13_[+3(6.95e-05)]_\ 54 chrX:12017957-12018077 6.99e-03 69_[+1(4.84e-05)]_43 chr3L:18904892-18905012 3.78e-04 12_[+2(2.00e-05)]_100 chrX:9085859-9085979 4.49e-04 34_[+1(6.78e-05)]_42_[+3(6.95e-05)]_\ 28 chr2L:8449542-8449662 5.11e-03 11_[+5(2.62e-05)]_101 chr3R:16484158-16484278 3.34e-04 41_[+2(9.29e-05)]_29_[+1(2.90e-05)]_\ 34 chr2L:5278946-5279066 8.31e-03 56_[+1(2.90e-05)]_56 chrX:13194389-13194509 3.63e-03 17_[+5(7.00e-05)]_95 chr3R:27938469-27938589 8.00e-02 93_[+3(6.95e-05)]_19 chr2R:10885166-10885286 2.93e-02 69_[+3(1.88e-05)]_43 chr3R:11749410-11749530 2.96e-04 47_[+2(4.68e-05)]_7_[+1(2.90e-05)]_\ 8_[+1(2.90e-05)]_34 chrX:6090209-6090329 8.98e-03 63_[+1(2.90e-05)]_49 chrX:13091050-13091170 2.22e-04 65_[+1(2.90e-05)]_47 chr3L:20028947-20029067 2.20e-04 53_[+2(4.68e-05)]_44_[+5(2.62e-05)]_\ 7 chrX:15345099-15345219 6.14e-04 1_[+4(3.22e-05)]_69_[+1(9.73e-05)]_\ 34 chr3R:5554245-5554365 7.50e-03 120 chr3L:1756256-1756376 5.94e-02 58_[+3(6.95e-05)]_54 chr3R:7644459-7644579 2.85e-02 46_[+3(1.88e-05)]_66 chrX:13285820-13285940 5.82e-03 27_[+1(2.90e-05)]_85 chr2L:6960260-6960380 2.31e-04 53_[+2(2.00e-05)]_59 chr2L:10405106-10405226 1.24e-01 120 chr2R:10068662-10068782 3.32e-03 36_[+2(2.00e-05)]_76 chr2R:18411558-18411678 4.69e-02 120 chr2L:10728887-10729007 1.65e-05 52_[+1(4.84e-05)]_44_[+3(1.88e-05)]_\ 8 chr3L:13412756-13412876 4.07e-04 46_[+4(1.28e-05)]_16_[+4(3.22e-05)]_\ 42 chr2L:2969621-2969741 2.17e-04 62_[+1(4.84e-05)]_14_[+3(3.14e-05)]_\ 28 chr2R:19191641-19191761 5.02e-04 73_[+3(1.88e-05)]_1_[+2(9.29e-05)]_\ 30 chr4:481919-482039 2.90e-04 44_[+1(4.84e-05)]_3_[+4(3.22e-05)]_\ 17_[+1(9.73e-05)]_32 chr2L:5532177-5532297 1.40e-02 31_[+2(2.00e-05)]_81 chr3R:29724884-29725004 1.74e-03 38_[+2(4.68e-05)]_74 chrX:9273286-9273406 9.29e-03 85_[+4(3.22e-05)]_27 chrX:17078746-17078866 1.59e-04 4_[+4(3.22e-05)]_12_[+4(4.52e-05)]_\ 29_[+4(4.52e-05)]_4_[+4(4.52e-05)]_7_[+3(3.14e-05)]_24 chr2L:3145665-3145785 5.23e-04 62_[+2(9.29e-05)]_20_[+1(2.90e-05)]_\ 22 chrX:9556528-9556648 2.50e-03 6_[+1(6.78e-05)]_106 chrX:16803323-16803443 4.66e-03 17_[+4(3.22e-05)]_95 chr3L:8966729-8966849 1.27e-02 120 chrX:16599135-16599255 8.30e-03 106_[+4(3.22e-05)]_6 chr3L:6955450-6955570 6.28e-04 41_[+2(9.29e-05)]_53_[+4(3.22e-05)]_\ 10 chr2R:23396662-23396782 5.10e-02 120 chr3L:20491675-20491795 1.22e-01 120 chrX:11888289-11888409 1.75e-04 64_[+5(1.30e-05)]_11_[+3(1.88e-05)]_\ 29 chr3L:20427612-20427732 5.98e-04 48_[+2(3.34e-05)]_64 chr3R:24230068-24230188 5.57e-01 120 chr2R:6648481-6648601 2.37e-04 44_[+2(2.00e-05)]_5_[+4(3.22e-05)]_\ 13_[+4(3.22e-05)]_18_[+4(3.22e-05)]_8 chr2R:8167876-8167996 5.43e-03 15_[+1(2.90e-05)]_97 chr2L:15271958-15272078 1.85e-04 39_[+2(9.29e-05)]_49_[+1(2.90e-05)]_\ 8_[+4(1.28e-05)] chr3R:10407263-10407383 3.47e-04 9_[+2(9.29e-05)]_55_[+1(2.90e-05)]_\ 28_[+1(2.90e-05)]_4 chrX:9159943-9160063 1.25e-05 7_[+5(2.62e-05)]_2_[+2(9.29e-05)]_\ 10_[+1(2.90e-05)]_77 chr3L:19836496-19836616 5.84e-04 50_[+1(4.84e-05)]_62 chr2L:15038809-15038929 1.65e-02 120 chr2L:21677680-21677800 7.97e-01 120 chrX:9163179-9163299 4.22e-04 [+1(2.90e-05)]_23_[+1(2.90e-05)]_27_\ [+3(6.95e-05)]_46 chrX:5691141-5691261 8.26e-03 59_[+1(2.90e-05)]_53 chr2R:22185924-22186044 6.95e-05 38_[+3(8.86e-05)]_6_[+4(6.47e-05)]_\ 33_[+4(6.47e-05)]_19 chr2L:11100824-11100944 4.55e-04 20_[+2(3.34e-05)]_20_[+4(6.47e-05)]_\ 64 chr3R:5659048-5659168 3.91e-05 88_[+2(2.00e-05)]_24 chr3R:11412517-11412637 1.12e-03 50_[+3(8.86e-05)]_62 chr2L:1982153-1982273 3.32e-04 52_[+3(8.86e-05)]_60 chr2R:14771616-14771736 2.59e-02 94_[+3(6.95e-05)]_18 chrX:22443670-22443790 8.65e-02 120 chr2R:16142117-16142237 1.43e-05 45_[+4(6.47e-05)]_13_[+5(6.12e-05)]_\ 18_[+3(3.14e-05)]_20 chrX:13718244-13718364 1.08e-04 35_[+2(9.29e-05)]_47_[+1(2.90e-05)]_\ 22 chr3L:4607131-4607251 4.62e-02 7_[+2(2.00e-05)]_105 chr3L:21441369-21441489 1.03e-02 35_[+4(6.47e-05)]_77 chrX:8240574-8240694 4.14e-03 58_[+1(4.84e-05)]_54 chrX:12018160-12018280 1.51e-02 60_[+3(4.43e-05)]_52 chrX:23007632-23007752 1.72e-02 100_[+1(6.78e-05)]_12 chr2R:23843256-23843376 1.17e-03 120 chr2L:19756887-19757007 8.72e-05 52_[+1(2.90e-05)]_60 chrX:23097471-23097591 6.40e-03 66_[+5(9.35e-05)]_46 chr2R:18614985-18615105 1.33e-04 59_[+5(3.51e-05)]_8_[+3(8.86e-05)]_\ 37 chr2R:14770795-14770915 1.64e-02 120 chr3L:20361534-20361654 6.47e-05 58_[+5(1.30e-05)]_10_[+1(2.90e-05)]_\ 13_[+1(4.84e-05)]_15 chrX:11868964-11869084 6.00e-01 120 chrX:2727630-2727750 3.52e-04 46_[+4(1.28e-05)]_66 chrX:4936209-4936329 1.11e-04 4_[+4(3.22e-05)]_65_[+3(3.14e-05)]_\ 35 chr3R:15361635-15361755 1.25e-03 48_[+1(2.90e-05)]_64 chr3R:15803581-15803701 1.02e-01 120 chrX:13154938-13155058 2.44e-03 45_[+1(6.78e-05)]_10_[+1(2.90e-05)]_\ 49 chr3R:11437686-11437806 2.14e-04 21_[+4(3.22e-05)]_17_[+4(3.22e-05)]_\ 20_[+3(3.14e-05)]_38 chr3L:4406027-4406147 1.01e-03 37_[+2(9.29e-05)]_42_[+1(2.90e-05)]_\ 25 chrX:8906152-8906272 1.87e-02 85_[+2(2.00e-05)]_27 chr2L:1704852-1704972 4.55e-04 16_[+4(6.47e-05)]_45_[+3(4.43e-05)]_\ 43 chr2L:16825152-16825272 9.23e-03 120 chr2R:5760786-5760906 1.27e-03 35_[+1(2.90e-05)]_30_[+3(6.95e-05)]_\ 39 chr3R:29835054-29835174 9.17e-05 10_[+2(9.29e-05)]_7_[+4(3.22e-05)]_\ [+4(4.52e-05)]_15_[+1(4.84e-05)]_56 chr2R:17056789-17056909 5.49e-04 77_[+4(4.52e-05)]_7_[+1(9.73e-05)]_\ 20 chr2L:8302939-8303059 2.28e-04 45_[+2(4.68e-05)]_67 chrX:1900155-1900275 8.39e-02 10_[+2(9.29e-05)]_102 chr3L:14006924-14007044 3.55e-04 52_[+2(2.00e-05)]_14_[+1(2.90e-05)]_\ 38 chr3L:174662-174782 1.17e-03 8_[+4(1.28e-05)]_11_[+1(2.90e-05)]_\ 2_[+1(9.73e-05)]_75 chr2R:20262816-20262936 2.17e-04 48_[+2(4.68e-05)]_30_[+1(2.90e-05)]_\ 26 chr2L:5271292-5271412 1.08e-03 84_[+2(9.29e-05)]_18_[+1(2.90e-05)]_\ 2 chr3L:3937950-3938070 7.85e-04 60_[+1(2.90e-05)]_17_[+1(2.90e-05)]_\ 27 chr2R:24603507-24603627 1.22e-02 120 chrX:18648099-18648219 3.13e-04 5_[+4(3.22e-05)]_13_[+4(3.22e-05)]_\ 18_[+4(3.22e-05)]_1_[+4(3.22e-05)]_9_[+3(3.14e-05)]_34 chr3L:22288144-22288264 2.76e-04 41_[+2(9.29e-05)]_30_[+1(2.90e-05)]_\ 33 chrX:13212279-13212399 1.95e-04 33_[+1(2.90e-05)]_1_[+4(4.52e-05)]_\ 14_[+3(3.14e-05)]_48 chr2L:19033418-19033538 3.68e-03 120 chr2L:4847662-4847782 1.24e-03 60_[+1(2.90e-05)]_6_[+5(8.76e-05)]_\ 38 chrX:10082465-10082585 3.20e-03 18_[+2(2.00e-05)]_94 chr2R:21386203-21386323 1.91e-02 120 chr2L:8030226-8030346 6.80e-02 120 chr3L:4367465-4367585 3.13e-03 1_[+2(2.00e-05)]_49_[+3(1.88e-05)]_\ 54 chr2L:9893355-9893475 1.07e-04 73_[+1(2.90e-05)]_21_[+2(4.68e-05)]_\ 10 chrX:13285620-13285740 2.75e-03 [+4(3.22e-05)]_13_[+1(2.90e-05)]_17_\ [+1(9.73e-05)]_11_[+4(3.22e-05)]_47 chrX:8489726-8489846 4.42e-04 38_[+1(4.84e-05)]_74 chr2R:16001233-16001353 2.14e-02 39_[+2(9.29e-05)]_73 chr2L:20734864-20734984 1.16e-02 61_[+3(4.43e-05)]_51 chr2L:1478632-1478752 8.79e-01 120 chr3L:3055011-3055131 2.01e-03 120 chr2R:17456432-17456552 4.66e-02 45_[+3(1.88e-05)]_67 chr3L:13011703-13011823 5.30e-03 41_[+1(2.90e-05)]_71 chr3R:10708292-10708412 2.40e-05 60_[+2(4.68e-05)]_14_[+1(2.90e-05)]_\ 30 chr3R:14655639-14655759 2.74e-02 83_[+2(4.68e-05)]_29 chr2R:12514973-12515093 3.04e-01 120 chr2L:5720984-5721104 7.69e-04 41_[+1(2.90e-05)]_18_[+3(6.95e-05)]_\ 45 chrX:4931149-4931269 1.24e-04 64_[+2(3.34e-05)]_8_[+4(3.22e-05)]_\ 5_[+4(3.22e-05)]_19 chrX:11092381-11092501 1.04e-04 88_[+2(4.68e-05)]_[+1(2.90e-05)]_2_\ [+4(6.47e-05)]_6 chrX:127363-127483 1.97e-04 38_[+4(3.22e-05)]_20_[+3(3.14e-05)]_\ 11_[+4(6.47e-05)]_27 chr3R:4390265-4390385 2.78e-04 64_[+1(2.90e-05)]_31_[+3(3.14e-05)]_\ 9 chr3L:9624144-9624264 4.22e-02 120 chrX:5873303-5873423 2.76e-03 22_[+1(4.84e-05)]_7_[+1(2.90e-05)]_\ 75 chr3R:6380316-6380436 9.14e-01 120 chrX:8101975-8102095 8.86e-02 101_[+2(3.34e-05)]_11 chr3R:24661804-24661924 2.70e-03 58_[+1(2.90e-05)]_27_[+4(6.47e-05)]_\ 19 chr2L:20065654-20065774 7.62e-04 21_[+4(3.22e-05)]_17_[+1(2.90e-05)]_\ 66 chr3R:24234902-24235022 2.56e-03 22_[+1(2.90e-05)]_90 chr3L:13994136-13994256 2.43e-02 120 chr3L:3192474-3192594 7.43e-05 9_[+5(6.12e-05)]_4_[+1(4.84e-05)]_4_\ [+4(4.52e-05)]_79 chr3L:4283781-4283901 3.91e-04 74_[+3(1.88e-05)]_38 chr3L:8304107-8304227 1.32e-02 58_[+2(2.00e-05)]_54 chr3R:15832642-15832762 2.66e-04 14_[+2(2.00e-05)]_26_[+1(2.90e-05)]_\ 64 chrX:1773633-1773753 2.70e-04 32_[+1(2.90e-05)]_38_[+1(2.90e-05)]_\ 34 chr2L:10743890-10744010 4.85e-07 14_[+5(1.30e-05)]_51_[+1(2.90e-05)]_\ 39 chr3R:5550597-5550717 5.65e-03 31_[+2(9.29e-05)]_81 chr3R:12456483-12456603 6.23e-03 31_[+1(9.73e-05)]_81 chr2L:15039038-15039158 9.51e-01 120 chr3L:12417507-12417627 5.08e-05 56_[+4(4.52e-05)]_42_[+1(2.90e-05)]_\ 6 chr3R:16652287-16652407 3.10e-05 26_[+5(1.30e-05)]_56_[+1(2.90e-05)]_\ 22 chrX:17143176-17143296 3.56e-02 120 chr2L:10517217-10517337 2.68e-04 104_[+5(1.30e-05)]_8 chr3R:30806594-30806714 7.38e-06 [+1(2.90e-05)]_6_[+1(2.90e-05)]_18_\ [+5(3.51e-05)]_25_[+1(2.90e-05)]_21_[+4(3.22e-05)]_10 chr3R:15363792-15363912 1.76e-03 120 chr3R:31738367-31738487 1.14e-01 82_[+3(1.88e-05)]_30 chr2R:17669337-17669457 9.50e-04 13_[+1(2.90e-05)]_16_[+3(6.95e-05)]_\ 75 chrX:1664969-1665089 3.08e-03 69_[+1(2.90e-05)]_43 chr2R:18094870-18094990 2.36e-04 37_[+4(3.22e-05)]_19_[+1(9.73e-05)]_\ 27_[+3(4.43e-05)]_13 chr2R:7711978-7712098 1.67e-03 90_[+1(2.90e-05)]_22 chr2R:11844187-11844307 3.88e-03 38_[+4(6.47e-05)]_9_[+1(4.84e-05)]_\ 57 chr3R:25122820-25122940 1.67e-02 100_[+2(9.29e-05)]_12 chrX:5941973-5942093 2.08e-03 52_[+2(3.34e-05)]_60 chr3R:16651089-16651209 1.17e-03 77_[+1(2.90e-05)]_35 chrX:5317296-5317416 6.71e-03 53_[+2(2.00e-05)]_59 chr2L:10396608-10396728 8.88e-03 104_[+1(2.90e-05)]_8 chr2R:22420306-22420426 8.46e-04 64_[+1(2.90e-05)]_48 chrX:2713956-2714076 2.70e-02 88_[+3(8.86e-05)]_24 chr3R:10413178-10413298 4.30e-02 120 chr4:1033020-1033140 5.39e-03 42_[+2(3.34e-05)]_70 chr2R:17723250-17723370 3.14e-04 6_[+4(6.47e-05)]_41_[+3(3.14e-05)]_\ 57 chr3L:11626577-11626697 3.68e-02 120 chr3R:21886935-21887055 2.70e-03 120 chr3R:7093683-7093803 2.19e-01 30_[+2(2.00e-05)]_82 chr3R:18738222-18738342 3.33e-01 120 chrX:19746033-19746153 4.14e-02 120 chr2L:19064864-19064984 1.94e-03 3_[+1(2.90e-05)]_57_[+1(9.73e-05)]_\ 44 chr3R:24805215-24805335 9.26e-02 120 chr3L:22072166-22072286 2.23e-01 120 chr3L:15816848-15816968 1.51e-04 86_[+1(2.90e-05)]_11_[+1(2.90e-05)]_\ 7 chr2L:4387042-4387162 1.99e-04 120 chrX:7074434-7074554 1.60e-03 87_[+3(1.88e-05)]_25 chr2L:5096322-5096442 3.80e-02 44_[+5(1.30e-05)]_43_[+5(6.12e-05)]_\ 17 chr3L:11825690-11825810 4.51e-02 38_[+1(9.73e-05)]_74 chr3R:5219529-5219649 1.20e-02 120 chrX:9162049-9162169 2.33e-02 12_[+1(9.73e-05)]_100 chr2L:6677589-6677709 7.74e-03 84_[+4(6.47e-05)]_28 chr3R:11407831-11407951 8.50e-05 107_[+5(2.62e-05)]_5 chrX:5695152-5695272 2.64e-04 49_[+1(2.90e-05)]_17_[+5(5.25e-05)]_\ 38 chr2L:10321246-10321366 7.79e-01 120 chr2L:10435972-10436092 5.06e-03 16_[+1(2.90e-05)]_96 chr2R:9882313-9882433 2.22e-03 100_[+1(2.90e-05)]_12 chr3R:27116648-27116768 8.31e-05 60_[+4(6.47e-05)]_10_[+1(6.78e-05)]_\ 3_[+5(2.62e-05)]_23 chr2L:16879377-16879497 1.59e-06 29_[+2(2.00e-05)]_9_[+1(2.90e-05)]_\ 48_[+5(2.62e-05)]_10 chr3R:21360076-21360196 9.36e-05 49_[+1(9.73e-05)]_14_[+4(3.22e-05)]_\ 14_[+3(4.43e-05)]_19 chrX:15802961-15803081 1.21e-02 36_[+1(2.90e-05)]_5_[+1(4.84e-05)]_\ 63 chr3R:19644988-19645108 1.70e-04 26_[+1(2.90e-05)]_13_[+3(6.95e-05)]_\ 65 chr4:1231779-1231899 1.46e-03 75_[+1(2.90e-05)]_3_[+4(1.28e-05)]_\ 26 chr2L:560335-560455 9.97e-04 79_[+1(2.90e-05)]_33 chrX:15482283-15482403 1.82e-04 38_[+1(2.90e-05)]_26_[+3(1.88e-05)]_\ 40 chrX:23105880-23106000 1.51e-02 110_[+1(9.73e-05)]_2 chr3L:17024239-17024359 1.12e-02 56_[+1(9.73e-05)]_27_[+1(2.90e-05)]_\ 21 chr3L:19845186-19845306 2.69e-04 59_[+3(3.14e-05)]_[+5(1.30e-05)]_45 chrX:12763610-12763730 1.75e-02 33_[+1(2.90e-05)]_55_[+1(2.90e-05)]_\ 16 chr2L:19041782-19041902 2.91e-02 50_[+4(6.47e-05)]_19_[+1(9.73e-05)]_\ 35 chrX:2180821-2180941 5.62e-06 10_[+1(2.90e-05)]_13_[+5(1.30e-05)]_\ 81 chr3R:17687007-17687127 4.35e-02 120 chr2R:23972397-23972517 1.83e-03 22_[+1(2.90e-05)]_90 chr3R:9763130-9763250 9.82e-04 12_[+2(9.29e-05)]_18_[+1(4.84e-05)]_\ 74 chrX:15484597-15484717 2.88e-03 30_[+4(6.47e-05)]_82 chrX:6037738-6037858 1.55e-03 49_[+1(4.84e-05)]_5_[+4(1.28e-05)]_\ 13_[+4(3.22e-05)]_18_[+4(3.22e-05)]_3 chr3L:8449343-8449463 1.72e-03 60_[+1(4.84e-05)]_52 chr3L:4103146-4103266 6.88e-01 120 chr2L:10230573-10230693 8.82e-03 85_[+4(6.47e-05)]_5_[+1(4.84e-05)]_\ 14 chr2L:19034571-19034691 5.28e-03 120 chrX:17852649-17852769 7.42e-03 65_[+1(2.90e-05)]_47 chr3L:12118431-12118551 4.25e-02 120 chrX:4686867-4686987 1.49e-02 69_[+4(6.47e-05)]_19_[+4(6.47e-05)]_\ 16 chr2R:20667260-20667380 8.35e-02 120 chrX:5332407-5332527 4.18e-02 40_[+3(1.88e-05)]_72 chrX:16587187-16587307 6.69e-02 108_[+2(4.68e-05)]_4 chr2L:10056845-10056965 3.64e-02 120 chrX:10595964-10596084 4.14e-03 83_[+1(2.90e-05)]_29 chrX:15796172-15796292 3.23e-04 78_[+5(3.51e-05)]_14_[+4(6.47e-05)]_\ 12 chr2R:23939709-23939829 4.59e-05 60_[+1(2.90e-05)]_5_[+2(2.00e-05)]_\ 39 chr3R:4232301-4232421 1.25e-03 49_[+1(2.90e-05)]_36_[+4(6.47e-05)]_\ 19 chr3L:14942924-14943044 1.90e-03 120 chr3R:23053459-23053579 5.36e-02 120 chr2R:14601153-14601273 3.89e-05 18_[+5(7.00e-05)]_17_[+2(3.34e-05)]_\ 69 chrX:2698456-2698576 1.09e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n07.farnam.hpc.yale.internal ********************************************************************************