******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/Myb.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2L:885128-885248 1.0000 120 chr2R:7931023-7931143 1.0000 120 chr2L:1166413-1166533 1.0000 120 chr2L:7013258-7013378 1.0000 120 chr3R:7973165-7973285 1.0000 120 chr2L:122405-122525 1.0000 120 chr3R:25023150-25023270 1.0000 120 chr3R:22492923-22493043 1.0000 120 chrX:18018543-18018663 1.0000 120 chrX:8265391-8265511 1.0000 120 chr3R:29816424-29816544 1.0000 120 chr3R:27228524-27228644 1.0000 120 chr3L:2780815-2780935 1.0000 120 chr3R:16180648-16180768 1.0000 120 chr3L:4003369-4003489 1.0000 120 chr2R:24313241-24313361 1.0000 120 chr2L:19518666-19518786 1.0000 120 chr3L:5133767-5133887 1.0000 120 chr3L:8160185-8160305 1.0000 120 chr2R:9822932-9823052 1.0000 120 chr2R:23878342-23878462 1.0000 120 chr3L:21773984-21774104 1.0000 120 chr3R:24357902-24358022 1.0000 120 chr3L:8652010-8652130 1.0000 120 chr2R:19670542-19670662 1.0000 120 chr2R:6668027-6668147 1.0000 120 chr3R:25235496-25235616 1.0000 120 chr3R:27273270-27273390 1.0000 120 chrX:19276877-19276997 1.0000 120 chr3R:27651839-27651959 1.0000 120 chrX:644087-644207 1.0000 120 chrX:19326861-19326981 1.0000 120 chr3R:12704994-12705114 1.0000 120 chr2L:12048883-12049003 1.0000 120 chr2R:24661366-24661486 1.0000 120 chr2L:14288030-14288150 1.0000 120 chr3R:5632200-5632320 1.0000 120 chr3R:7644420-7644540 1.0000 120 chrX:11129043-11129163 1.0000 120 chr2L:10476995-10477115 1.0000 120 chr2R:14526143-14526263 1.0000 120 chr3R:15268578-15268698 1.0000 120 chr3L:5777268-5777388 1.0000 120 chrX:7066744-7066864 1.0000 120 chr3R:18230381-18230501 1.0000 120 chr3R:15249850-15249970 1.0000 120 chr2R:16143044-16143164 1.0000 120 chr2L:15118150-15118270 1.0000 120 chr2R:23877622-23877742 1.0000 120 chr2R:14770775-14770895 1.0000 120 chr2L:13827711-13827831 1.0000 120 chrX:9085840-9085960 1.0000 120 chrX:7986678-7986798 1.0000 120 chr3L:4136013-4136133 1.0000 120 chr3L:7916374-7916494 1.0000 120 chr3L:3515412-3515532 1.0000 120 chr2R:12182559-12182679 1.0000 120 chr2L:2969636-2969756 1.0000 120 chr2R:17748030-17748150 1.0000 120 chr2L:13332889-13333009 1.0000 120 chr3R:24717397-24717517 1.0000 120 chr2L:10671655-10671775 1.0000 120 chr2L:21397445-21397565 1.0000 120 chr3L:11630799-11630919 1.0000 120 chrX:927679-927799 1.0000 120 chr2R:16230683-16230803 1.0000 120 chrX:14603675-14603795 1.0000 120 chr2L:4331969-4332089 1.0000 120 chr2R:19283927-19284047 1.0000 120 chr3R:23924302-23924422 1.0000 120 chrX:7074470-7074590 1.0000 120 chr3R:13699487-13699607 1.0000 120 chr2L:19530273-19530393 1.0000 120 chr3L:17806531-17806651 1.0000 120 chr2R:21251983-21252103 1.0000 120 chr2R:8665393-8665513 1.0000 120 chr2R:11293131-11293251 1.0000 120 chr3L:10225477-10225597 1.0000 120 chr3R:10076770-10076890 1.0000 120 chr3L:21441393-21441513 1.0000 120 chrX:9502409-9502529 1.0000 120 chr3L:11998085-11998205 1.0000 120 chr2R:12468092-12468212 1.0000 120 chr2R:11289763-11289883 1.0000 120 chr2R:16583363-16583483 1.0000 120 chr2L:19063167-19063287 1.0000 120 chr3R:26137408-26137528 1.0000 120 chr3R:8726741-8726861 1.0000 120 chr3L:16347960-16348080 1.0000 120 chrX:16881033-16881153 1.0000 120 chr2L:2151659-2151779 1.0000 120 chr2L:20223474-20223594 1.0000 120 chr2R:7711998-7712118 1.0000 120 chr3R:8723106-8723226 1.0000 120 chr2L:21220550-21220670 1.0000 120 chr2R:13439221-13439341 1.0000 120 chr2R:16149811-16149931 1.0000 120 chr2L:5532208-5532328 1.0000 120 chr3L:9211425-9211545 1.0000 120 chr3R:24922434-24922554 1.0000 120 chr2R:23402260-23402380 1.0000 120 chr3L:15072289-15072409 1.0000 120 chr3R:16436789-16436909 1.0000 120 chr2R:6647967-6648087 1.0000 120 chr3L:20221046-20221166 1.0000 120 chr3R:27582769-27582889 1.0000 120 chr3L:17669664-17669784 1.0000 120 chr2R:10112195-10112315 1.0000 120 chr2L:10743895-10744015 1.0000 120 chr2R:9863480-9863600 1.0000 120 chr3L:1970102-1970222 1.0000 120 chr3L:12193691-12193811 1.0000 120 chr3R:10815168-10815288 1.0000 120 chr3R:27928220-27928340 1.0000 120 chr2L:16738365-16738485 1.0000 120 chr2L:5525789-5525909 1.0000 120 chr3R:20634980-20635100 1.0000 120 chr2R:7447428-7447548 1.0000 120 chr3L:2409427-2409547 1.0000 120 chr2R:12423455-12423575 1.0000 120 chr3R:16436547-16436667 1.0000 120 chr2L:11100847-11100967 1.0000 120 chr3L:13040967-13041087 1.0000 120 chrX:17622883-17623003 1.0000 120 chr3R:22094121-22094241 1.0000 120 chr3L:332609-332729 1.0000 120 chrX:12765224-12765344 1.0000 120 chr3R:15340443-15340563 1.0000 120 chrX:16587776-16587896 1.0000 120 chr2R:24603549-24603669 1.0000 120 chr3R:7085578-7085698 1.0000 120 chr2R:15940008-15940128 1.0000 120 chr3R:30000412-30000532 1.0000 120 chr2R:21704051-21704171 1.0000 120 chr3R:17449530-17449650 1.0000 120 chr2R:9039573-9039693 1.0000 120 chrX:927888-928008 1.0000 120 chr2R:8051928-8052048 1.0000 120 chr2R:22293246-22293366 1.0000 120 chrX:15328264-15328384 1.0000 120 chr2L:4019912-4020032 1.0000 120 chr3L:174671-174791 1.0000 120 chr2L:472959-473079 1.0000 120 chr2L:9540101-9540221 1.0000 120 chr2L:4442330-4442450 1.0000 120 chr2L:3145681-3145801 1.0000 120 chr3R:29138795-29138915 1.0000 120 chr3R:22618404-22618524 1.0000 120 chr2L:3648233-3648353 1.0000 120 chr3L:3252122-3252242 1.0000 120 chr3R:13471497-13471617 1.0000 120 chrX:1523438-1523558 1.0000 120 chr3L:3937973-3938093 1.0000 120 chr2L:6100214-6100334 1.0000 120 chr3L:20361541-20361661 1.0000 120 chrX:20393722-20393842 1.0000 120 chr3L:9047349-9047469 1.0000 120 chr2L:9253054-9253174 1.0000 120 chr3R:13271989-13272109 1.0000 120 chr2L:20294065-20294185 1.0000 120 chr2L:6127613-6127733 1.0000 120 chr3R:26966811-26966931 1.0000 120 chr2L:4382687-4382807 1.0000 120 chrX:16073757-16073877 1.0000 120 chr3R:19027284-19027404 1.0000 120 chr3R:23159460-23159580 1.0000 120 chr3R:29138591-29138711 1.0000 120 chr2R:19502960-19503080 1.0000 120 chr2R:20287055-20287175 1.0000 120 chrX:5613201-5613321 1.0000 120 chrX:17532343-17532463 1.0000 120 chr3R:5550580-5550700 1.0000 120 chrX:12967427-12967547 1.0000 120 chr3L:5927674-5927794 1.0000 120 chrX:932947-933067 1.0000 120 chr3L:12203968-12204088 1.0000 120 chr3R:20831102-20831222 1.0000 120 chr2R:18173084-18173204 1.0000 120 chr2L:8043286-8043406 1.0000 120 chr2R:20287286-20287406 1.0000 120 chrX:8177136-8177256 1.0000 120 chr2L:13021542-13021662 1.0000 120 chr2L:7473366-7473486 1.0000 120 chr3R:12219702-12219822 1.0000 120 chr2R:24138514-24138634 1.0000 120 chr2R:23357372-23357492 1.0000 120 chr2L:10206901-10207021 1.0000 120 chrX:9192553-9192673 1.0000 120 chrX:6261027-6261147 1.0000 120 chr2L:15771124-15771244 1.0000 120 chr2L:2045389-2045509 1.0000 120 chr3L:9629975-9630095 1.0000 120 chrX:12496670-12496790 1.0000 120 chr2R:23396688-23396808 1.0000 120 chrX:6683731-6683851 1.0000 120 chr3L:2782148-2782268 1.0000 120 chr3L:1318334-1318454 1.0000 120 chr3L:7640456-7640576 1.0000 120 chr2R:14758057-14758177 1.0000 120 chrX:12592242-12592362 1.0000 120 chrX:13154915-13155035 1.0000 120 chr2R:8627826-8627946 1.0000 120 chr3R:7131076-7131196 1.0000 120 chr2R:16142102-16142222 1.0000 120 chr3R:24719582-24719702 1.0000 120 chr3L:16842076-16842196 1.0000 120 chr3R:21069842-21069962 1.0000 120 chrX:13811554-13811674 1.0000 120 chr2L:16902149-16902269 1.0000 120 chr3L:20393535-20393655 1.0000 120 chrX:1460653-1460773 1.0000 120 chrX:2727592-2727712 1.0000 120 chr2L:7856523-7856643 1.0000 120 chr3L:4532221-4532341 1.0000 120 chr3L:995853-995973 1.0000 120 chr3R:8806201-8806321 1.0000 120 chr3R:12723957-12724077 1.0000 120 chr3L:4092848-4092968 1.0000 120 chr2R:17739392-17739512 1.0000 120 chr3L:21529311-21529431 1.0000 120 chr2R:23752647-23752767 1.0000 120 chr3L:3050279-3050399 1.0000 120 chr2R:9400267-9400387 1.0000 120 chrX:10220010-10220130 1.0000 120 chr3R:14259955-14260075 1.0000 120 chrX:8407491-8407611 1.0000 120 chr2L:6663809-6663929 1.0000 120 chr2L:4387058-4387178 1.0000 120 chr2L:14351595-14351715 1.0000 120 chr3L:12537250-12537370 1.0000 120 chr3R:9763679-9763799 1.0000 120 chr2L:4818167-4818287 1.0000 120 chrX:1664959-1665079 1.0000 120 chr2R:7709494-7709614 1.0000 120 chr3L:16139263-16139383 1.0000 120 chrX:2624708-2624828 1.0000 120 chr3L:11998288-11998408 1.0000 120 chr3R:14901540-14901660 1.0000 120 chr3L:21554964-21555084 1.0000 120 chrX:13738024-13738144 1.0000 120 chr2L:1704835-1704955 1.0000 120 chr2L:18714244-18714364 1.0000 120 chr2R:9843695-9843815 1.0000 120 chrX:15482266-15482386 1.0000 120 chr2L:9460123-9460243 1.0000 120 chr2R:10885138-10885258 1.0000 120 chr2L:11120274-11120394 1.0000 120 chrX:19762337-19762457 1.0000 120 chrX:2172416-2172536 1.0000 120 chr3R:27283715-27283835 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_Myb/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/Myb.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.301 C 0.205 G 0.194 T 0.3 Background letter frequencies (from file dataset with add-one prior applied): A 0.301 C 0.205 G 0.194 T 0.3 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF WWTTBAAA MEME-1 width = 8 sites = 182 llr = 1150 E-value = 5.6e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 54:::8a9 pos.-specific C 1:::4::: probability G :1::32:: matrix T 36aa3::1 bits 2.4 2.1 1.9 1.7 ** * Relative 1.4 ** ** Entropy 1.2 ** *** (9.1 bits) 0.9 ** *** 0.7 ** *** 0.5 ******* 0.2 ******** 0.0 -------- Multilevel ATTTCAAA consensus TA T sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:4092848-4092968 111 4.54e-05 TTTAAACAGT ATTTCAAA TC chr2L:7473366-7473486 67 4.54e-05 CCGCAAGACA ATTTCAAA TTCAACGACA chrX:8177136-8177256 95 4.54e-05 AATATTTGGT ATTTCAAA ATACCTTATT chr3R:8723106-8723226 20 4.54e-05 TTAGCGGGTA ATTTCAAA TCTAATGTGC chr2L:2151659-2151779 1 4.54e-05 . ATTTCAAA AACCAACGAA chr3L:17806531-17806651 7 4.54e-05 TTTTAC ATTTCAAA ATACAGAGCT chr3R:23924302-23924422 13 4.54e-05 AAAAAGATAA ATTTCAAA AAACCGTTTT chr2R:16230683-16230803 69 4.54e-05 AGACGTTATG ATTTCAAA AATCTTTTCG chr2R:17748030-17748150 42 4.54e-05 CTTTACTTGA ATTTCAAA TGATAGCTGG chrX:19762337-19762457 106 8.84e-05 TTAAATATTT ATTTGAAA ACAAACG chr2R:9843695-9843815 28 8.84e-05 ATTTAACGGC ATTTGAAA TTCCAGCGAA chr2L:6663809-6663929 33 8.84e-05 AGAATTAACT ATTTGAAA GCTGTATAAG chr2R:19502960-19503080 2 8.84e-05 A ATTTGAAA AGGCGCCAAC chr3R:23159460-23159580 105 8.84e-05 TTAACTTTAA ATTTGAAA AGATATTA chr3R:26966811-26966931 20 8.84e-05 AATTCGCACT ATTTGAAA TCAACGACTG chr2L:9540101-9540221 12 8.84e-05 TTTTTTAGTT ATTTGAAA TTTTGGCACA chr3L:15072289-15072409 12 8.84e-05 CAACCGTTGG ATTTGAAA TGAGCGATTA chr3R:26137408-26137528 59 8.84e-05 GTGGCGCTAC ATTTGAAA AACGTAAGAG chr3L:7916374-7916494 90 8.84e-05 GCGCATTGGT ATTTGAAA ATTTTTAACG chr2R:6668027-6668147 49 8.84e-05 TAAATGAAAC ATTTGAAA GTAACCGACT chr2L:19518666-19518786 16 8.84e-05 TAAAAAATCT ATTTGAAA CATCGACAGC chr2R:24313241-24313361 98 8.84e-05 TGAAAAACTA ATTTGAAA TTATTGAGCA chr3R:27228524-27228644 110 8.84e-05 TACTATTCGA ATTTGAAA AGT chr2L:885128-885248 93 8.84e-05 ACGGTTTAGC ATTTGAAA TTTTATTCAA chr2L:11120274-11120394 111 1.79e-04 CGGATTTTTA AATTCAAA TT chrX:15482266-15482386 12 1.79e-04 AAACATCGGC TTTTCAAA TATACCGTTA chrX:13738024-13738144 21 1.79e-04 CATTATTCAA TTTTCAAA AAACCATTTC chrX:1664959-1665079 13 1.79e-04 AACGAATGCT AATTCAAA TTCCGATAAC chr2R:23752647-23752767 28 1.79e-04 GCACATATTT AATTCAAA ATGACCGCGA chr3L:20393535-20393655 94 1.79e-04 TCAATGATTA AATTCAAA CGTGTGTTCT chr3L:7640456-7640576 26 1.79e-04 GCGTCTAAGC TTTTCAAA AAAATCCACC chr2R:23396688-23396808 68 1.79e-04 AGCCTTGGCA AATTCAAA AGTTGTGCGC chr2R:23357372-23357492 93 1.79e-04 TTCCAACGCT TTTTCAAA TATTTTTTGT chr3L:12203968-12204088 110 1.79e-04 CGAATTGGTC AATTCAAA TTT chr3R:5550580-5550700 24 1.79e-04 tgcgtttttg ttttcAAA CTGCCACATT chrX:1523438-1523558 98 1.79e-04 GTTGCCGTTT AATTCAAA CAAGAAAAAT chr3R:30000412-30000532 20 1.79e-04 TTTCAATTTA AATTCAAA TCAGCGATAT chrX:16587776-16587896 3 1.79e-04 CA AATTCAAA AAGGCATATT chr3L:13040967-13041087 58 1.79e-04 GCTTGTGTCT TTTTCAAA TACGATTAAT chr3L:1970102-1970222 54 1.79e-04 CGAAAGAGCT TTTTCAAA GCTCAACACA chr2R:10112195-10112315 29 1.79e-04 ATTTTTTCAC TTTTCAAA TTAAGAGCGT chr3L:16347960-16348080 3 1.79e-04 TT TTTTCAAA ATTTAACTGG chr3L:21441393-21441513 81 1.79e-04 AAATAACCAA AATTCAAA CTCTCTATTA chrX:14603675-14603795 79 1.79e-04 AACCAATTAA AATTCAAA ACAAAGTTTA chr2L:13827711-13827831 106 1.79e-04 ACATTGATTT AATTCAAA TTTATTT chrX:7066744-7066864 53 1.79e-04 TTTCAATAAT TTTTCAAA ACTTTTTTTG chr3L:5777268-5777388 104 1.79e-04 GGTACGTTAG AATTCAAA AATGTTTTA chr3R:5632200-5632320 3 1.79e-04 AA AATTCAAA AACTATTTTC chr3L:21773984-21774104 24 1.79e-04 ATGGCGCCAG AATTCAAA TACAACGACT chr3L:8160185-8160305 17 1.79e-04 ATTTTTTTCG AATTCAAA ATCTTGAACG chrX:8265391-8265511 10 1.79e-04 TTAAATTTA AATTCAAA CTAACCTCCG chr2L:7013258-7013378 5 1.79e-04 GCAT AATTCAAA TAATTAAATT chrX:9192553-9192673 26 2.46e-04 AAAATACAAA ATTTTAAA TTCAAACCGG chr2L:6127613-6127733 101 2.46e-04 GTGCATTTCC ATTTTAAA CGAATTTTCG chrX:17622883-17623003 105 2.46e-04 GCCGTTAAAC ATTTTAAA AGCTTACA chr3R:16436547-16436667 93 2.46e-04 CATTCCTCAA ATTTTAAA CCTGTATTGA chr2R:12423455-12423575 16 2.46e-04 AATTTTAGCA ATTTTAAA TTTTAAAATG chr3R:10815168-10815288 65 2.46e-04 CAAAGGGGAA ATTTTAAA ACAGCTGTCC chr3L:20221046-20221166 7 2.46e-04 TAAACT ATTTTAAA TCTATCCGCC chr2L:19063167-19063287 2 2.46e-04 A ATTTTAAA GAAAAAAAAT chr3L:11998085-11998205 96 2.46e-04 TTTCCGTTAT ATTTTAAA AATACCTTTT chr3R:13699487-13699607 111 2.46e-04 AACGGTAATT ATTTTAAA AT chrX:7074470-7074590 93 2.46e-04 TTCTGTTTGA ATTTTAAA TGTTCTTTCG chr3R:12704994-12705114 22 2.46e-04 AAACTTTCAA ATTTTAAA CTTTTCGAAA chr3R:25023150-25023270 12 2.46e-04 TTAAGTTGAA ATTTTAAA AAATCGTTAT chr2L:4818167-4818287 30 3.32e-04 ATAGATTCAG TTTTGAAA TTAAATAAAC chr3R:8806201-8806321 5 3.32e-04 ACAA AATTGAAA TTTGTATTTT chrX:13811554-13811674 30 3.32e-04 GAATATGGTA TTTTGAAA GTGGTTGAGT chr2R:16142102-16142222 22 3.32e-04 AAAAATAAAC TTTTGAAA ATAACATTCA chr3L:2782148-2782268 9 3.32e-04 TAATTTTG AATTGAAA CTGGGCAACC chr3R:13471497-13471617 72 3.32e-04 GCCACCTATC TTTTGAAA CCAGCAACAC chr3L:3252122-3252242 16 3.32e-04 ATTTTTTAAA TTTTGAAA AGTATACAAC chr2L:5525789-5525909 44 3.32e-04 TTTTGTACCA TTTTGAAA ACAAACCGCT chr3R:27928220-27928340 79 3.32e-04 ACTGTCCCCC AATTGAAA TGCAGTGAAG chr3L:12193691-12193811 16 3.32e-04 AGTATATTAT TTTTGAAA AATATACCTA chr2R:16149811-16149931 4 3.32e-04 GCA TTTTGAAA GCTAACAAAA chr3L:10225477-10225597 69 3.32e-04 CACCATCCAA AATTGAAA CGCCCAGTAA chr2L:21397445-21397565 75 3.32e-04 gctaagcatt ttttgaaa atagataacg chr2R:12182559-12182679 102 3.32e-04 GGTAAAAACA AATTGAAA TATCCACCGA chrX:7986678-7986798 106 3.32e-04 TGTACTGCTA TTTTGAAA AGGCGTT chrX:11129043-11129163 92 3.32e-04 AAGCTGTCAC TTTTGAAA GCCGAAAAAC chrX:19326861-19326981 7 3.32e-04 TCTTCA TTTTGAAA CCTATGCAAG chr3R:27273270-27273390 56 3.32e-04 ATGTCGGTTA TTTTGAAA AGGCGGAAAT chr3R:24357902-24358022 100 3.32e-04 AGTAACGTAA TTTTGAAA AACCTTTTTT chr3L:4003369-4003489 1 3.32e-04 . TTTTGAAA ATTAACGGTC chr2R:14758057-14758177 49 3.77e-04 TAGTCGTTAC TATTCAAA CTCAATAGTT chr3R:24717397-24717517 25 3.77e-04 ACCATTAATT TATTCAAA TATTCGTTAG chr2R:23877622-23877742 11 3.77e-04 TGTAAAGCTT TATTCAAA TTTTGGCGCC chr3R:29816424-29816544 89 3.77e-04 TATTTTCGGC TATTCAAA TATTTAAAAA chr2R:10885138-10885258 1 5.10e-04 . TTTTTAAA TTAATGATAA chr3L:16139263-16139383 107 5.10e-04 TTACGTTTTA AATTTAAA ATTCAA chr3R:9763679-9763799 26 5.10e-04 TACTTTTCAT AATTTAAA GCCGCGCATT chr3L:995853-995973 70 5.10e-04 ACGGTCGTGG TTTTTAAA ATCAAGTACC chr3L:4532221-4532341 110 5.10e-04 AACCGTTGGG AATTTAAA TGG chr3L:332609-332729 29 5.10e-04 ACAGCTTTAG TTTTTAAA TATTTAGGTG chr2L:16738365-16738485 97 5.10e-04 CTGTAGTTTG AATTTAAA TTAAAAGTCG chr2R:9863480-9863600 106 5.10e-04 TAGCCACCTT TTTTTAAA TAAAATG chr3R:24922434-24922554 106 5.10e-04 TGGCATTTTA TTTTTAAA CATAAAC chr2R:7711998-7712118 5 5.10e-04 AAGC TTTTTAAA ACGACGGGTA chr2L:20223474-20223594 52 5.10e-04 AATGGTTTCG TTTTTAAA TACTTGATAT chrX:16881033-16881153 12 5.10e-04 TTGATCTTTC AATTTAAA ATTTCAACGC chr3L:11630799-11630919 40 5.10e-04 TAACTGACCT TTTTTAAA ATTTTGATGG chr2L:2969636-2969756 82 5.10e-04 CCTCTAGCGA TTTTTAAA AATTTAAATC chr2L:14288030-14288150 97 5.10e-04 AGTCAGTTAA AATTTAAA ATTCTTTATT chr3R:22492923-22493043 104 5.10e-04 TGGTAACGCT TTTTTAAA TACTAAATA chr2L:122405-122525 43 5.10e-04 AAGCGATTCG AATTTAAA CGGCCGACTC chr2L:1166413-1166533 8 5.10e-04 TCGTAAA AATTTAAA TCTTAAAAGT chr2R:7931023-7931143 90 5.10e-04 AAATACGGTA AATTTAAA ATAGCTTTTC chr3L:16842076-16842196 75 5.39e-04 CGAAACTTGT ATTTCGAA TTATCTTGTA chr2R:6647967-6648087 66 5.39e-04 CGAAGCCGTT ATTTCGAA ACCGTTACCG chr3R:14901540-14901660 43 6.13e-04 GGAGCTGTCA CTTTCAAA ATGGCCGCGA chrX:12592242-12592362 78 6.13e-04 CAGAATTGAA TATTGAAA TAGTTTTTCT chr2L:13021542-13021662 101 6.13e-04 CGCAGGCTAC CTTTCAAA TTAAAATTCC chr2L:5532208-5532328 103 6.13e-04 CTTTAACGAG CTTTCAAA TTTTGATACT chr3L:3937973-3938093 15 7.08e-04 ATCACACAAT ATTTGGAA GAGTAAATAA chr2L:3145681-3145801 113 7.08e-04 CCGTAACGAT TATTTAAA chr3R:16436789-16436909 112 7.08e-04 AATTAGTTTT TATTTAAA A chr2R:12468092-12468212 111 7.08e-04 CTATAACGGT TATTTAAA TT chr2R:16143044-16143164 7 7.08e-04 CTGGGT TATTTAAA ATAAAAATAA chr3L:11998288-11998408 98 7.95e-04 TAAAAACACG TTTTCGAA ATGTACACTA chrX:2624708-2624828 29 7.95e-04 CATAAGGGTT AATTCGAA TTTTTCGAGA chr2L:14351595-14351715 33 7.95e-04 AAGTTGGCCA AATTCGAA AGCTCCGAAA chrX:12496670-12496790 98 7.95e-04 CGATAACTGT CTTTGAAA TATGATAGCT chr2R:9039573-9039693 103 7.95e-04 AAAAAGGCTT TTTTCGAA GGCGGTTAAA chr3R:7085578-7085698 20 7.95e-04 TTGATTCGAA AATTCGAA TCGAAGCGGT chr2R:11289763-11289883 91 7.95e-04 AAAGCGTTAC AATTCGAA CATGCCCGGA chr2L:13332889-13333009 83 7.95e-04 CAAACGATGG CTTTGAAA TTCTTCAGAC chr3L:3515412-3515532 6 7.95e-04 AAAAA CTTTGAAA GCAGGCTGCC chr3R:18230381-18230501 11 7.95e-04 CAAAGTGAGA AATTCGAA TTCAAGCTCG chr2L:10476995-10477115 20 7.95e-04 TTTCGAGTGG CTTTGAAA AACCAGTAAG chr3R:27651839-27651959 98 7.95e-04 CAGCCATGTG AATTCGAA ATTAACTAAT chr3L:5133767-5133887 73 7.95e-04 ACCTGCCAAC TTTTCGAA ATTAGCTGCA chr2R:21704051-21704171 6 8.69e-04 CCCTC CATTCAAA ATTTCAATTC chr2R:13439221-13439341 41 8.69e-04 TAATGCCTTT CATTCAAA TGCATCAAGC chr3L:21529311-21529431 90 9.15e-04 AATCCAATGC CTTTTAAA TCCCTATTAT chrX:17532343-17532463 31 9.15e-04 AGCCGTTACC CTTTTAAA TACGAGTGTA chr2R:17739392-17739512 6 9.99e-04 TAGTC AGTTCAAA TAATCGTTAT chr3R:24719582-24719702 96 9.99e-04 ATTAGTTTAA AATTGGAA ATAACTTGAT chr3R:22094121-22094241 68 9.99e-04 CCGACGAAGC TTTTGGAA GCCCATCATG chr2R:7709494-7709614 104 1.06e-03 TGGGCGCCAA TATTCGAA ATTAACCAA chr3R:7131076-7131196 74 1.14e-03 ATTTCAGTTA AATTTGAA TTGCTGAGAG chrX:13154915-13155035 52 1.14e-03 AAACCGATAG TTTTTGAA GCTTTAGATC chrX:6683731-6683851 23 1.14e-03 CGGTTTTTAG TTTTTGAA TTCTCCAAAT chr2R:16583363-16583483 68 1.14e-03 GGCCGTTAGG AATTTGAA TTAACAGAGC chr2R:19283927-19284047 6 1.14e-03 AATAT TTTTTGAA GAGCAGAATG chrX:644087-644207 73 1.14e-03 CCGTTGAACG TTTTTGAA TTCCTAAAAA chrX:18018543-18018663 39 1.14e-03 GTTTGTTTCG AATTTGAA TCGGTTGTTA chr3R:7973165-7973285 47 1.14e-03 AAGACCTTTG AATTTGAA TTTTGATTAT chrX:927888-928008 38 1.22e-03 TGTTGGCTTG CATTTAAA GACGCCATCG chr2L:11100847-11100967 91 1.32e-03 GCGAAACGTT CTTTCGAA ATCAAGAAAA chr2L:4331969-4332089 43 1.32e-03 TTTAATGTAG CTTTCGAA CTTGTGAGCT chr2L:15118150-15118270 107 1.32e-03 ACGGTCGCTT GTTTCAAA CTGAAG chr2L:10671655-10671775 14 1.37e-03 TAAAACGAAG AGTTTAAA GCTGTGTGAA chr3R:15268578-15268698 104 1.37e-03 GCAACTGTTT AGTTTAAA AATAGTAAA chrX:2727592-2727712 56 1.53e-03 ATAACAGAAG TGTTGAAA GTGAATTCGA chr2R:8627826-8627946 13 1.53e-03 GGACCAAAGC ATTTCAAT TCGTAAGTAA chr3R:12219702-12219822 98 1.53e-03 AAGCCGTTAC ATTTCAAT ATAACATAAA chrX:9085840-9085960 36 1.69e-03 TTACAAAGTG CTTTTGAA CCAACCAACT chr2R:23878342-23878462 20 1.69e-03 AATGGAGCAC TGTTTAAA CTCCGCTTTC chr2L:18714244-18714364 17 1.75e-03 AATCTTAAAG ATTTGAAT AGCTCAGATC chr3L:9211425-9211545 83 1.75e-03 TCAGGTTTTG AGTTCGAA TGCAAAATGC chr2L:16902149-16902269 97 1.91e-03 AAATACCATG CGTTCAAA ATAAAAATAC chr2L:10206901-10207021 10 1.91e-03 ATTGCTCTC AATTCAAT TAATTCGCAG chr3R:29138591-29138711 25 1.91e-03 ACTCATACGA CGTTCAAA TAAATGGCAG chr3R:13271989-13272109 111 1.91e-03 AAATAACGGA TTTTCAAT AT chr2L:9253054-9253174 96 1.91e-03 GTTCACGACC GATTGAAA ATACTAGAAA chr2L:21220550-21220670 38 1.91e-03 AAATCATCAT CATTGGAA CTGGGTTCGG chr3R:7644420-7644540 36 1.91e-03 CTCGGCCACA CGTTCAAA GATTAAAACC chr3R:25235496-25235616 113 1.91e-03 AGGCGGTTAC AATTCAAT chr3R:8726741-8726861 13 1.98e-03 AGATTGTTTG ATTTTAAT TAGTAGCAGC chrX:1460653-1460773 81 2.07e-03 TGCAGATTTT GATTTAAA GTTTAAGTTA chr3R:21069842-21069962 52 2.07e-03 CTTAAAAATC GATTTAAA TGGGGCTAAA chr3R:20634980-20635100 38 2.07e-03 CTGCTTAACT GATTTAAA TAATATCGAT chr3L:2780815-2780935 12 2.07e-03 TTTACAAAAT GATTTAAA AAGACGTTAC chr2L:7856523-7856643 103 2.28e-03 ACGGCGTTGT AGTTTGAA TCTTGAGTTC chr3L:20361541-20361661 108 2.28e-03 GCTTGCGGTT TATTCAAT TTGTA chr2L:2045389-2045509 19 2.45e-03 TTGGTTTTAT AATTTAAT CGATCCTTTC chr3R:15340443-15340563 85 2.45e-03 CGCTTAACTA TTTTTAAT TTTCTTTCAA chr2L:19530273-19530393 107 2.45e-03 CCCGTTACTT TTTTTAAT TTAAGA chr2L:8043286-8043406 13 2.51e-03 CATATATAAT ATTTCGAT ATCTTAACGG chr3R:14259955-14260075 91 3.21e-03 TAACAGTCTC ATTTGACA TAGATGCACA chr3L:8652010-8652130 48 3.51e-03 GTACCTGTCT ATTTTACA TGCATTCTAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:4092848-4092968 4.5e-05 110_[+1]_2 chr2L:7473366-7473486 4.5e-05 66_[+1]_46 chrX:8177136-8177256 4.5e-05 94_[+1]_18 chr3R:8723106-8723226 4.5e-05 19_[+1]_93 chr2L:2151659-2151779 4.5e-05 [+1]_112 chr3L:17806531-17806651 4.5e-05 6_[+1]_106 chr3R:23924302-23924422 4.5e-05 12_[+1]_100 chr2R:16230683-16230803 4.5e-05 68_[+1]_44 chr2R:17748030-17748150 4.5e-05 41_[+1]_71 chrX:19762337-19762457 8.8e-05 105_[+1]_7 chr2R:9843695-9843815 8.8e-05 27_[+1]_85 chr2L:6663809-6663929 8.8e-05 32_[+1]_80 chr2R:19502960-19503080 8.8e-05 1_[+1]_111 chr3R:23159460-23159580 8.8e-05 104_[+1]_8 chr3R:26966811-26966931 8.8e-05 19_[+1]_93 chr2L:9540101-9540221 8.8e-05 11_[+1]_101 chr3L:15072289-15072409 8.8e-05 11_[+1]_101 chr3R:26137408-26137528 8.8e-05 58_[+1]_54 chr3L:7916374-7916494 8.8e-05 89_[+1]_23 chr2R:6668027-6668147 8.8e-05 48_[+1]_64 chr2L:19518666-19518786 8.8e-05 15_[+1]_97 chr2R:24313241-24313361 8.8e-05 97_[+1]_15 chr3R:27228524-27228644 8.8e-05 109_[+1]_3 chr2L:885128-885248 8.8e-05 92_[+1]_20 chr2L:11120274-11120394 0.00018 110_[+1]_2 chrX:15482266-15482386 0.00018 11_[+1]_101 chrX:13738024-13738144 0.00018 20_[+1]_92 chrX:1664959-1665079 0.00018 12_[+1]_100 chr2R:23752647-23752767 0.00018 27_[+1]_85 chr3L:20393535-20393655 0.00018 93_[+1]_19 chr3L:7640456-7640576 0.00018 25_[+1]_87 chr2R:23396688-23396808 0.00018 67_[+1]_45 chr2R:23357372-23357492 0.00018 92_[+1]_20 chr3L:12203968-12204088 0.00018 109_[+1]_3 chr3R:5550580-5550700 0.00018 23_[+1]_89 chrX:1523438-1523558 0.00018 97_[+1]_15 chr3R:30000412-30000532 0.00018 19_[+1]_93 chrX:16587776-16587896 0.00018 2_[+1]_110 chr3L:13040967-13041087 0.00018 57_[+1]_55 chr3L:1970102-1970222 0.00018 53_[+1]_59 chr2R:10112195-10112315 0.00018 28_[+1]_84 chr3L:16347960-16348080 0.00018 2_[+1]_110 chr3L:21441393-21441513 0.00018 80_[+1]_32 chrX:14603675-14603795 0.00018 78_[+1]_34 chr2L:13827711-13827831 0.00018 105_[+1]_7 chrX:7066744-7066864 0.00018 52_[+1]_60 chr3L:5777268-5777388 0.00018 103_[+1]_9 chr3R:5632200-5632320 0.00018 2_[+1]_110 chr3L:21773984-21774104 0.00018 23_[+1]_89 chr3L:8160185-8160305 0.00018 16_[+1]_96 chrX:8265391-8265511 0.00018 9_[+1]_103 chr2L:7013258-7013378 0.00018 4_[+1]_108 chrX:9192553-9192673 0.00025 25_[+1]_87 chr2L:6127613-6127733 0.00025 100_[+1]_12 chrX:17622883-17623003 0.00025 104_[+1]_8 chr3R:16436547-16436667 0.00025 92_[+1]_20 chr2R:12423455-12423575 0.00025 15_[+1]_97 chr3R:10815168-10815288 0.00025 64_[+1]_48 chr3L:20221046-20221166 0.00025 6_[+1]_106 chr2L:19063167-19063287 0.00025 1_[+1]_111 chr3L:11998085-11998205 0.00025 95_[+1]_17 chr3R:13699487-13699607 0.00025 110_[+1]_2 chrX:7074470-7074590 0.00025 92_[+1]_20 chr3R:12704994-12705114 0.00025 21_[+1]_91 chr3R:25023150-25023270 0.00025 11_[+1]_101 chr2L:4818167-4818287 0.00033 29_[+1]_83 chr3R:8806201-8806321 0.00033 4_[+1]_108 chrX:13811554-13811674 0.00033 29_[+1]_83 chr2R:16142102-16142222 0.00033 21_[+1]_91 chr3L:2782148-2782268 0.00033 8_[+1]_104 chr3R:13471497-13471617 0.00033 71_[+1]_41 chr3L:3252122-3252242 0.00033 15_[+1]_97 chr2L:5525789-5525909 0.00033 43_[+1]_69 chr3R:27928220-27928340 0.00033 78_[+1]_34 chr3L:12193691-12193811 0.00033 15_[+1]_97 chr2R:16149811-16149931 0.00033 3_[+1]_109 chr3L:10225477-10225597 0.00033 68_[+1]_44 chr2L:21397445-21397565 0.00033 74_[+1]_38 chr2R:12182559-12182679 0.00033 101_[+1]_11 chrX:7986678-7986798 0.00033 105_[+1]_7 chrX:11129043-11129163 0.00033 91_[+1]_21 chrX:19326861-19326981 0.00033 6_[+1]_106 chr3R:27273270-27273390 0.00033 55_[+1]_57 chr3R:24357902-24358022 0.00033 99_[+1]_13 chr3L:4003369-4003489 0.00033 [+1]_112 chr2R:14758057-14758177 0.00038 48_[+1]_64 chr3R:24717397-24717517 0.00038 24_[+1]_88 chr2R:23877622-23877742 0.00038 10_[+1]_102 chr3R:29816424-29816544 0.00038 88_[+1]_24 chr2R:10885138-10885258 0.00051 [+1]_112 chr3L:16139263-16139383 0.00051 106_[+1]_6 chr3R:9763679-9763799 0.00051 25_[+1]_87 chr3L:995853-995973 0.00051 69_[+1]_43 chr3L:4532221-4532341 0.00051 109_[+1]_3 chr3L:332609-332729 0.00051 28_[+1]_84 chr2L:16738365-16738485 0.00051 96_[+1]_16 chr2R:9863480-9863600 0.00051 105_[+1]_7 chr3R:24922434-24922554 0.00051 105_[+1]_7 chr2R:7711998-7712118 0.00051 4_[+1]_108 chr2L:20223474-20223594 0.00051 51_[+1]_61 chrX:16881033-16881153 0.00051 11_[+1]_101 chr3L:11630799-11630919 0.00051 39_[+1]_73 chr2L:2969636-2969756 0.00051 81_[+1]_31 chr2L:14288030-14288150 0.00051 96_[+1]_16 chr3R:22492923-22493043 0.00051 103_[+1]_9 chr2L:122405-122525 0.00051 42_[+1]_70 chr2L:1166413-1166533 0.00051 7_[+1]_105 chr2R:7931023-7931143 0.00051 89_[+1]_23 chr3L:16842076-16842196 0.00054 74_[+1]_38 chr2R:6647967-6648087 0.00054 65_[+1]_47 chr3R:14901540-14901660 0.00061 42_[+1]_70 chrX:12592242-12592362 0.00061 77_[+1]_35 chr2L:13021542-13021662 0.00061 100_[+1]_12 chr2L:5532208-5532328 0.00061 102_[+1]_10 chr3L:3937973-3938093 0.00071 14_[+1]_98 chr2L:3145681-3145801 0.00071 112_[+1] chr3R:16436789-16436909 0.00071 111_[+1]_1 chr2R:12468092-12468212 0.00071 110_[+1]_2 chr2R:16143044-16143164 0.00071 6_[+1]_106 chr3L:11998288-11998408 0.0008 97_[+1]_15 chrX:2624708-2624828 0.0008 28_[+1]_84 chr2L:14351595-14351715 0.0008 32_[+1]_80 chrX:12496670-12496790 0.0008 97_[+1]_15 chr2R:9039573-9039693 0.0008 102_[+1]_10 chr3R:7085578-7085698 0.0008 19_[+1]_93 chr2R:11289763-11289883 0.0008 90_[+1]_22 chr2L:13332889-13333009 0.0008 82_[+1]_30 chr3L:3515412-3515532 0.0008 5_[+1]_107 chr3R:18230381-18230501 0.0008 10_[+1]_102 chr2L:10476995-10477115 0.0008 19_[+1]_93 chr3R:27651839-27651959 0.0008 97_[+1]_15 chr3L:5133767-5133887 0.0008 72_[+1]_40 chr2R:21704051-21704171 0.00087 5_[+1]_107 chr2R:13439221-13439341 0.00087 40_[+1]_72 chr3L:21529311-21529431 0.00091 89_[+1]_23 chrX:17532343-17532463 0.00091 30_[+1]_82 chr2R:17739392-17739512 0.001 5_[+1]_107 chr3R:24719582-24719702 0.001 95_[+1]_17 chr3R:22094121-22094241 0.001 67_[+1]_45 chr2R:7709494-7709614 0.0011 103_[+1]_9 chr3R:7131076-7131196 0.0011 73_[+1]_39 chrX:13154915-13155035 0.0011 51_[+1]_61 chrX:6683731-6683851 0.0011 22_[+1]_90 chr2R:16583363-16583483 0.0011 67_[+1]_45 chr2R:19283927-19284047 0.0011 5_[+1]_107 chrX:644087-644207 0.0011 72_[+1]_40 chrX:18018543-18018663 0.0011 38_[+1]_74 chr3R:7973165-7973285 0.0011 46_[+1]_66 chrX:927888-928008 0.0012 37_[+1]_75 chr2L:11100847-11100967 0.0013 90_[+1]_22 chr2L:4331969-4332089 0.0013 42_[+1]_70 chr2L:15118150-15118270 0.0013 106_[+1]_6 chr2L:10671655-10671775 0.0014 13_[+1]_99 chr3R:15268578-15268698 0.0014 103_[+1]_9 chrX:2727592-2727712 0.0015 55_[+1]_57 chr2R:8627826-8627946 0.0015 12_[+1]_100 chr3R:12219702-12219822 0.0015 97_[+1]_15 chrX:9085840-9085960 0.0017 35_[+1]_77 chr2R:23878342-23878462 0.0017 19_[+1]_93 chr2L:18714244-18714364 0.0018 16_[+1]_96 chr3L:9211425-9211545 0.0018 82_[+1]_30 chr2L:16902149-16902269 0.0019 96_[+1]_16 chr2L:10206901-10207021 0.0019 9_[+1]_103 chr3R:29138591-29138711 0.0019 24_[+1]_88 chr3R:13271989-13272109 0.0019 110_[+1]_2 chr2L:9253054-9253174 0.0019 95_[+1]_17 chr2L:21220550-21220670 0.0019 37_[+1]_75 chr3R:7644420-7644540 0.0019 35_[+1]_77 chr3R:25235496-25235616 0.0019 112_[+1] chr3R:8726741-8726861 0.002 12_[+1]_100 chrX:1460653-1460773 0.0021 80_[+1]_32 chr3R:21069842-21069962 0.0021 51_[+1]_61 chr3R:20634980-20635100 0.0021 37_[+1]_75 chr3L:2780815-2780935 0.0021 11_[+1]_101 chr2L:7856523-7856643 0.0023 102_[+1]_10 chr3L:20361541-20361661 0.0023 107_[+1]_5 chr2L:2045389-2045509 0.0024 18_[+1]_94 chr3R:15340443-15340563 0.0024 84_[+1]_28 chr2L:19530273-19530393 0.0024 106_[+1]_6 chr2L:8043286-8043406 0.0025 12_[+1]_100 chr3R:14259955-14260075 0.0032 90_[+1]_22 chr3L:8652010-8652130 0.0035 47_[+1]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WWTTBAAA width=8 seqs=182 chr3L:4092848-4092968 ( 111) ATTTCAAA 1 chr2L:7473366-7473486 ( 67) ATTTCAAA 1 chrX:8177136-8177256 ( 95) ATTTCAAA 1 chr3R:8723106-8723226 ( 20) ATTTCAAA 1 chr2L:2151659-2151779 ( 1) ATTTCAAA 1 chr3L:17806531-17806651 ( 7) ATTTCAAA 1 chr3R:23924302-23924422 ( 13) ATTTCAAA 1 chr2R:16230683-16230803 ( 69) ATTTCAAA 1 chr2R:17748030-17748150 ( 42) ATTTCAAA 1 chrX:19762337-19762457 ( 106) ATTTGAAA 1 chr2R:9843695-9843815 ( 28) ATTTGAAA 1 chr2L:6663809-6663929 ( 33) ATTTGAAA 1 chr2R:19502960-19503080 ( 2) ATTTGAAA 1 chr3R:23159460-23159580 ( 105) ATTTGAAA 1 chr3R:26966811-26966931 ( 20) ATTTGAAA 1 chr2L:9540101-9540221 ( 12) ATTTGAAA 1 chr3L:15072289-15072409 ( 12) ATTTGAAA 1 chr3R:26137408-26137528 ( 59) ATTTGAAA 1 chr3L:7916374-7916494 ( 90) ATTTGAAA 1 chr2R:6668027-6668147 ( 49) ATTTGAAA 1 chr2L:19518666-19518786 ( 16) ATTTGAAA 1 chr2R:24313241-24313361 ( 98) ATTTGAAA 1 chr3R:27228524-27228644 ( 110) ATTTGAAA 1 chr2L:885128-885248 ( 93) ATTTGAAA 1 chr2L:11120274-11120394 ( 111) AATTCAAA 1 chrX:15482266-15482386 ( 12) TTTTCAAA 1 chrX:13738024-13738144 ( 21) TTTTCAAA 1 chrX:1664959-1665079 ( 13) AATTCAAA 1 chr2R:23752647-23752767 ( 28) AATTCAAA 1 chr3L:20393535-20393655 ( 94) AATTCAAA 1 chr3L:7640456-7640576 ( 26) TTTTCAAA 1 chr2R:23396688-23396808 ( 68) AATTCAAA 1 chr2R:23357372-23357492 ( 93) TTTTCAAA 1 chr3L:12203968-12204088 ( 110) AATTCAAA 1 chr3R:5550580-5550700 ( 24) TTTTCAAA 1 chrX:1523438-1523558 ( 98) AATTCAAA 1 chr3R:30000412-30000532 ( 20) AATTCAAA 1 chrX:16587776-16587896 ( 3) AATTCAAA 1 chr3L:13040967-13041087 ( 58) TTTTCAAA 1 chr3L:1970102-1970222 ( 54) TTTTCAAA 1 chr2R:10112195-10112315 ( 29) TTTTCAAA 1 chr3L:16347960-16348080 ( 3) TTTTCAAA 1 chr3L:21441393-21441513 ( 81) AATTCAAA 1 chrX:14603675-14603795 ( 79) AATTCAAA 1 chr2L:13827711-13827831 ( 106) AATTCAAA 1 chrX:7066744-7066864 ( 53) TTTTCAAA 1 chr3L:5777268-5777388 ( 104) AATTCAAA 1 chr3R:5632200-5632320 ( 3) AATTCAAA 1 chr3L:21773984-21774104 ( 24) AATTCAAA 1 chr3L:8160185-8160305 ( 17) AATTCAAA 1 chrX:8265391-8265511 ( 10) AATTCAAA 1 chr2L:7013258-7013378 ( 5) AATTCAAA 1 chrX:9192553-9192673 ( 26) ATTTTAAA 1 chr2L:6127613-6127733 ( 101) ATTTTAAA 1 chrX:17622883-17623003 ( 105) ATTTTAAA 1 chr3R:16436547-16436667 ( 93) ATTTTAAA 1 chr2R:12423455-12423575 ( 16) ATTTTAAA 1 chr3R:10815168-10815288 ( 65) ATTTTAAA 1 chr3L:20221046-20221166 ( 7) ATTTTAAA 1 chr2L:19063167-19063287 ( 2) ATTTTAAA 1 chr3L:11998085-11998205 ( 96) ATTTTAAA 1 chr3R:13699487-13699607 ( 111) ATTTTAAA 1 chrX:7074470-7074590 ( 93) ATTTTAAA 1 chr3R:12704994-12705114 ( 22) ATTTTAAA 1 chr3R:25023150-25023270 ( 12) ATTTTAAA 1 chr2L:4818167-4818287 ( 30) TTTTGAAA 1 chr3R:8806201-8806321 ( 5) AATTGAAA 1 chrX:13811554-13811674 ( 30) TTTTGAAA 1 chr2R:16142102-16142222 ( 22) TTTTGAAA 1 chr3L:2782148-2782268 ( 9) AATTGAAA 1 chr3R:13471497-13471617 ( 72) TTTTGAAA 1 chr3L:3252122-3252242 ( 16) TTTTGAAA 1 chr2L:5525789-5525909 ( 44) TTTTGAAA 1 chr3R:27928220-27928340 ( 79) AATTGAAA 1 chr3L:12193691-12193811 ( 16) TTTTGAAA 1 chr2R:16149811-16149931 ( 4) TTTTGAAA 1 chr3L:10225477-10225597 ( 69) AATTGAAA 1 chr2L:21397445-21397565 ( 75) TTTTGAAA 1 chr2R:12182559-12182679 ( 102) AATTGAAA 1 chrX:7986678-7986798 ( 106) TTTTGAAA 1 chrX:11129043-11129163 ( 92) TTTTGAAA 1 chrX:19326861-19326981 ( 7) TTTTGAAA 1 chr3R:27273270-27273390 ( 56) TTTTGAAA 1 chr3R:24357902-24358022 ( 100) TTTTGAAA 1 chr3L:4003369-4003489 ( 1) TTTTGAAA 1 chr2R:14758057-14758177 ( 49) TATTCAAA 1 chr3R:24717397-24717517 ( 25) TATTCAAA 1 chr2R:23877622-23877742 ( 11) TATTCAAA 1 chr3R:29816424-29816544 ( 89) TATTCAAA 1 chr2R:10885138-10885258 ( 1) TTTTTAAA 1 chr3L:16139263-16139383 ( 107) AATTTAAA 1 chr3R:9763679-9763799 ( 26) AATTTAAA 1 chr3L:995853-995973 ( 70) TTTTTAAA 1 chr3L:4532221-4532341 ( 110) AATTTAAA 1 chr3L:332609-332729 ( 29) TTTTTAAA 1 chr2L:16738365-16738485 ( 97) AATTTAAA 1 chr2R:9863480-9863600 ( 106) TTTTTAAA 1 chr3R:24922434-24922554 ( 106) TTTTTAAA 1 chr2R:7711998-7712118 ( 5) TTTTTAAA 1 chr2L:20223474-20223594 ( 52) TTTTTAAA 1 chrX:16881033-16881153 ( 12) AATTTAAA 1 chr3L:11630799-11630919 ( 40) TTTTTAAA 1 chr2L:2969636-2969756 ( 82) TTTTTAAA 1 chr2L:14288030-14288150 ( 97) AATTTAAA 1 chr3R:22492923-22493043 ( 104) TTTTTAAA 1 chr2L:122405-122525 ( 43) AATTTAAA 1 chr2L:1166413-1166533 ( 8) AATTTAAA 1 chr2R:7931023-7931143 ( 90) AATTTAAA 1 chr3L:16842076-16842196 ( 75) ATTTCGAA 1 chr2R:6647967-6648087 ( 66) ATTTCGAA 1 chr3R:14901540-14901660 ( 43) CTTTCAAA 1 chrX:12592242-12592362 ( 78) TATTGAAA 1 chr2L:13021542-13021662 ( 101) CTTTCAAA 1 chr2L:5532208-5532328 ( 103) CTTTCAAA 1 chr3L:3937973-3938093 ( 15) ATTTGGAA 1 chr2L:3145681-3145801 ( 113) TATTTAAA 1 chr3R:16436789-16436909 ( 112) TATTTAAA 1 chr2R:12468092-12468212 ( 111) TATTTAAA 1 chr2R:16143044-16143164 ( 7) TATTTAAA 1 chr3L:11998288-11998408 ( 98) TTTTCGAA 1 chrX:2624708-2624828 ( 29) AATTCGAA 1 chr2L:14351595-14351715 ( 33) AATTCGAA 1 chrX:12496670-12496790 ( 98) CTTTGAAA 1 chr2R:9039573-9039693 ( 103) TTTTCGAA 1 chr3R:7085578-7085698 ( 20) AATTCGAA 1 chr2R:11289763-11289883 ( 91) AATTCGAA 1 chr2L:13332889-13333009 ( 83) CTTTGAAA 1 chr3L:3515412-3515532 ( 6) CTTTGAAA 1 chr3R:18230381-18230501 ( 11) AATTCGAA 1 chr2L:10476995-10477115 ( 20) CTTTGAAA 1 chr3R:27651839-27651959 ( 98) AATTCGAA 1 chr3L:5133767-5133887 ( 73) TTTTCGAA 1 chr2R:21704051-21704171 ( 6) CATTCAAA 1 chr2R:13439221-13439341 ( 41) CATTCAAA 1 chr3L:21529311-21529431 ( 90) CTTTTAAA 1 chrX:17532343-17532463 ( 31) CTTTTAAA 1 chr2R:17739392-17739512 ( 6) AGTTCAAA 1 chr3R:24719582-24719702 ( 96) AATTGGAA 1 chr3R:22094121-22094241 ( 68) TTTTGGAA 1 chr2R:7709494-7709614 ( 104) TATTCGAA 1 chr3R:7131076-7131196 ( 74) AATTTGAA 1 chrX:13154915-13155035 ( 52) TTTTTGAA 1 chrX:6683731-6683851 ( 23) TTTTTGAA 1 chr2R:16583363-16583483 ( 68) AATTTGAA 1 chr2R:19283927-19284047 ( 6) TTTTTGAA 1 chrX:644087-644207 ( 73) TTTTTGAA 1 chrX:18018543-18018663 ( 39) AATTTGAA 1 chr3R:7973165-7973285 ( 47) AATTTGAA 1 chrX:927888-928008 ( 38) CATTTAAA 1 chr2L:11100847-11100967 ( 91) CTTTCGAA 1 chr2L:4331969-4332089 ( 43) CTTTCGAA 1 chr2L:15118150-15118270 ( 107) GTTTCAAA 1 chr2L:10671655-10671775 ( 14) AGTTTAAA 1 chr3R:15268578-15268698 ( 104) AGTTTAAA 1 chrX:2727592-2727712 ( 56) TGTTGAAA 1 chr2R:8627826-8627946 ( 13) ATTTCAAT 1 chr3R:12219702-12219822 ( 98) ATTTCAAT 1 chrX:9085840-9085960 ( 36) CTTTTGAA 1 chr2R:23878342-23878462 ( 20) TGTTTAAA 1 chr2L:18714244-18714364 ( 17) ATTTGAAT 1 chr3L:9211425-9211545 ( 83) AGTTCGAA 1 chr2L:16902149-16902269 ( 97) CGTTCAAA 1 chr2L:10206901-10207021 ( 10) AATTCAAT 1 chr3R:29138591-29138711 ( 25) CGTTCAAA 1 chr3R:13271989-13272109 ( 111) TTTTCAAT 1 chr2L:9253054-9253174 ( 96) GATTGAAA 1 chr2L:21220550-21220670 ( 38) CATTGGAA 1 chr3R:7644420-7644540 ( 36) CGTTCAAA 1 chr3R:25235496-25235616 ( 113) AATTCAAT 1 chr3R:8726741-8726861 ( 13) ATTTTAAT 1 chrX:1460653-1460773 ( 81) GATTTAAA 1 chr3R:21069842-21069962 ( 52) GATTTAAA 1 chr3R:20634980-20635100 ( 38) GATTTAAA 1 chr3L:2780815-2780935 ( 12) GATTTAAA 1 chr2L:7856523-7856643 ( 103) AGTTTGAA 1 chr3L:20361541-20361661 ( 108) TATTCAAT 1 chr2L:2045389-2045509 ( 19) AATTTAAT 1 chr3R:15340443-15340563 ( 85) TTTTTAAT 1 chr2L:19530273-19530393 ( 107) TTTTTAAT 1 chr2L:8043286-8043406 ( 13) ATTTCGAT 1 chr3R:14259955-14260075 ( 91) ATTTGACA 1 chr3L:8652010-8652130 ( 48) ATTTTACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.66199 E= 5.6e-037 84 -97 -256 11 27 -1415 -182 96 -1415 -1415 -1415 174 -1415 -1415 -1415 174 -1415 97 44 16 147 -1415 -24 -1415 172 -422 -1415 -1415 163 -1415 -1415 -219 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 182 E= 5.6e-037 0.538462 0.104396 0.032967 0.324176 0.362637 0.000000 0.054945 0.582418 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.401099 0.263736 0.335165 0.835165 0.000000 0.164835 0.000000 0.989011 0.010989 0.000000 0.000000 0.934066 0.000000 0.000000 0.065934 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWTTBAAA MEME-1 regular expression -------------------------------------------------------------------------------- [AT][TA]TT[CTG]AAA -------------------------------------------------------------------------------- Time 7.52 secs. ******************************************************************************** ******************************************************************************** MOTIF BTGGCARC MEME-2 width = 8 sites = 62 llr = 520 E-value = 7.8e-021 ******************************************************************************** -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1::::94: pos.-specific C 3::3a1:a probability G 22a7::6: matrix T 38:::::: bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * * * Relative 1.4 *** * Entropy 1.2 ******* (12.1 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel CTGGCAGC consensus T C A sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:4387058-4387178 63 5.68e-06 TCTCTGCAGT CTGGCAGC CCAGCTCTGC chr2R:23396688-23396808 53 5.68e-06 TTGCGACCGT CTGGCAGC CTTGGCAAAT chr2R:12423455-12423575 51 5.68e-06 TCAAAATAAT CTGGCAGC TCTTGCAACC chr3R:27928220-27928340 61 5.68e-06 GGCTGCGCTT CTGGCAGC ACTGTCCCCC chr2L:10743895-10744015 47 5.68e-06 CAGTAAATAT CTGGCAGC ACTGTCTTAA chr2R:19283927-19284047 77 5.68e-06 CTTTAAAGGT CTGGCAGC ACCAACCGGT chr2R:17748030-17748150 56 5.68e-06 CAAATGATAG CTGGCAGC TCCACTGGCT chr2R:19670542-19670662 48 5.68e-06 TATGGCCTAT CTGGCAGC ACCATCAAAC chr2L:2045389-2045509 85 1.11e-05 ATCCTCTTCT GTGGCAGC GTTGCCAGAT chr2R:23402260-23402380 79 1.11e-05 CTTTTGCAGG GTGGCAGC GCTGTGTGCT chrX:7066744-7066864 76 1.11e-05 TTTTGGCGGT GTGGCAGC ACTGATTCAC chr2L:9460123-9460243 69 1.94e-05 ACGCTGTCCG TTGGCAGC TTGTAACGGT chr3L:1318334-1318454 84 1.94e-05 ACGAGCCGCG TTGGCAGC ACCGTTGGCG chr2R:12468092-12468212 91 1.94e-05 TCGCATCAAG TTGGCAGC AACTATAACG chr2R:21251983-21252103 22 1.94e-05 CGCCGGCTAA TTGGCAGC CATAGCCATC chr2R:23877622-23877742 99 1.94e-05 TAAGCGTGAG TTGGCAGC CCAGATGCCA chr2R:9843695-9843815 71 2.82e-05 CCAAATCGAT CTGGCAAC CCTTGAGACG chr3L:7640456-7640576 88 2.82e-05 TCTAAAAAGT CTGGCAAC CACATGCTCT chrX:7986678-7986798 64 2.82e-05 TTTCCGCTAA CTGGCAAC TCGGCGCCCA chr3R:26966811-26966931 77 3.42e-05 CAAGTTGAAC CTGCCAGC ACTGCTGCGA chr3R:23924302-23924422 75 3.79e-05 TTATCGATTA CGGGCAGC TCCACTTTCC chr3R:8806201-8806321 62 5.45e-05 GCGGGGCGAG GTGGCAAC TCTGCGGGGA chr2L:7856523-7856643 81 5.45e-05 CGAACATAAC GTGGCAAC GCCAACGGCG chr2R:19502960-19503080 71 5.45e-05 CTTTTATCAG GTGGCAAC GCCCGTGCCA chr3R:29138591-29138711 36 5.45e-05 GTTCAAATAA ATGGCAGC CTGGAAGCTC chr3R:23159460-23159580 66 5.45e-05 TTTTGACAAT ATGGCAGC GCTCTAACGG chr3R:10076770-10076890 55 5.45e-05 AGAAAACAGG ATGGCAGC CCCCGAGTGA chrX:14603675-14603795 14 5.45e-05 TTATTAGAGT GTGGCAAC GTTATAAACT chr2R:16143044-16143164 59 5.45e-05 CATAGCCAGT GTGGCAAC TCCCTGCAGC chrX:11129043-11129163 41 5.45e-05 TTGCCTAGCG ATGGCAGC GCGCTCGATA chr3R:27273270-27273390 12 5.45e-05 AACGGCTCAG GTGGCAAC TCTGGTTGCC chr3R:27228524-27228644 38 5.45e-05 CCACAATCAG ATGGCAGC TTTTATCTCG chr2L:885128-885248 47 5.45e-05 TTCTAACAGG GTGGCAAC ACTTCGGTTC chrX:8265391-8265511 87 7.31e-05 CTTCATTAAG TTGGCAAC GCCAACGGCG chr3L:5927674-5927794 76 8.58e-05 AGTTTTAGGG TTGCCAGC TGTTTTTTGT chr2L:6127613-6127733 65 8.58e-05 CAAAAATAAG CTGGCCGC TTGCCAACGG chr3R:22618404-22618524 75 8.58e-05 GTAATCACGT TTGCCAGC TGGTCGCGTT chr3R:5632200-5632320 108 8.58e-05 AAGCTATCAC TTGCCAGC TGGAA chr3R:16180648-16180768 66 8.58e-05 GTGTCAAGCG TTGCCAGC GCACTGAATA chr2L:1166413-1166533 78 8.58e-05 CTTCACAGCA CTGGCCGC TTGGCGTTAT chr3R:14901540-14901660 83 1.04e-04 CGCCGAGGGG CTGCCAAC TTTGGGGCCT chr3L:5133767-5133887 65 1.04e-04 AAATGCCGAC CTGCCAAC TTTTCGAAAT chr2L:4382687-4382807 47 1.19e-04 CTATCAACAA CGGGCAAC CCTGTTTTCA chr3R:19027284-19027404 48 1.36e-04 GCTACCCTCT CGGCCAGC TGACAAATTG chr2R:6668027-6668147 85 1.36e-04 TCGGGGTGAT ATGGCAAC GCCGCGAGCC chrX:15482266-15482386 76 1.73e-04 TCGAAGCGCG CTGGCCAC ACTTTTCATC chr2L:15771124-15771244 85 1.73e-04 TAGCACCGCG TTGCCAAC TTACTTGCTA chrX:932947-933067 109 1.73e-04 CGAAGAGCAC TTGCCAAC ACTC chr3L:16347960-16348080 42 1.73e-04 CCGCGCAGCA TTGCCAAC ACACACAATT chrX:2172416-2172536 61 1.88e-04 TATCAATTGC AGGGCAGC AAAGCAAAGT chr2R:20287055-20287175 42 1.88e-04 CGTAGATTAT AGGGCAGC ATGCGGAAGA chr3L:2782148-2782268 18 2.00e-04 GAATTGAAAC TGGGCAAC CATGTAATCC chrX:8177136-8177256 73 2.00e-04 AAAACGGTGT TGGGCAAC GCAAAATATT chr2L:3145681-3145801 30 2.00e-04 ACAATAGCGG TGGGCAAC TAACGCAGTT chr2R:7447428-7447548 25 2.08e-04 GGCTCGAATG TGGCCAGC CGCGGGTCAG chr2L:13332889-13333009 101 2.08e-04 TTCTTCAGAC TGGCCAGC TTTTGGAAAA chr2L:16902149-16902269 66 2.32e-04 GCCCAAAAGT GTGCCCGC CCTTGACCGT chrX:20393722-20393842 26 2.32e-04 GCAGCGCAGT GTGCCCGC TGACTTGCTC chr2L:16738365-16738485 34 2.32e-04 CCGTCTTGAT GTGCCCGC AAAATACTGG chr2L:10671655-10671775 59 2.79e-04 TTACATCTTA CTGCCCAC ATGCAAAAGT chr3R:7085578-7085698 52 3.03e-04 TTTCGTAGGG TGGCCAAC TACACCAAAG chr2R:24603549-24603669 101 3.14e-04 CGGTAGCGAA ATGGCCAC GGAGGAGCAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:4387058-4387178 5.7e-06 62_[+2]_50 chr2R:23396688-23396808 5.7e-06 52_[+2]_60 chr2R:12423455-12423575 5.7e-06 50_[+2]_62 chr3R:27928220-27928340 5.7e-06 60_[+2]_52 chr2L:10743895-10744015 5.7e-06 46_[+2]_66 chr2R:19283927-19284047 5.7e-06 76_[+2]_36 chr2R:17748030-17748150 5.7e-06 55_[+2]_57 chr2R:19670542-19670662 5.7e-06 47_[+2]_65 chr2L:2045389-2045509 1.1e-05 84_[+2]_28 chr2R:23402260-23402380 1.1e-05 78_[+2]_34 chrX:7066744-7066864 1.1e-05 75_[+2]_37 chr2L:9460123-9460243 1.9e-05 68_[+2]_44 chr3L:1318334-1318454 1.9e-05 83_[+2]_29 chr2R:12468092-12468212 1.9e-05 90_[+2]_22 chr2R:21251983-21252103 1.9e-05 21_[+2]_91 chr2R:23877622-23877742 1.9e-05 98_[+2]_14 chr2R:9843695-9843815 2.8e-05 70_[+2]_42 chr3L:7640456-7640576 2.8e-05 87_[+2]_25 chrX:7986678-7986798 2.8e-05 63_[+2]_49 chr3R:26966811-26966931 3.4e-05 76_[+2]_36 chr3R:23924302-23924422 3.8e-05 74_[+2]_38 chr3R:8806201-8806321 5.5e-05 61_[+2]_51 chr2L:7856523-7856643 5.5e-05 80_[+2]_32 chr2R:19502960-19503080 5.5e-05 70_[+2]_42 chr3R:29138591-29138711 5.5e-05 35_[+2]_77 chr3R:23159460-23159580 5.5e-05 65_[+2]_47 chr3R:10076770-10076890 5.5e-05 54_[+2]_58 chrX:14603675-14603795 5.5e-05 13_[+2]_99 chr2R:16143044-16143164 5.5e-05 58_[+2]_54 chrX:11129043-11129163 5.5e-05 40_[+2]_72 chr3R:27273270-27273390 5.5e-05 11_[+2]_101 chr3R:27228524-27228644 5.5e-05 37_[+2]_75 chr2L:885128-885248 5.5e-05 46_[+2]_66 chrX:8265391-8265511 7.3e-05 86_[+2]_26 chr3L:5927674-5927794 8.6e-05 75_[+2]_37 chr2L:6127613-6127733 8.6e-05 64_[+2]_48 chr3R:22618404-22618524 8.6e-05 74_[+2]_38 chr3R:5632200-5632320 8.6e-05 107_[+2]_5 chr3R:16180648-16180768 8.6e-05 65_[+2]_47 chr2L:1166413-1166533 8.6e-05 77_[+2]_35 chr3R:14901540-14901660 0.0001 82_[+2]_30 chr3L:5133767-5133887 0.0001 64_[+2]_48 chr2L:4382687-4382807 0.00012 46_[+2]_66 chr3R:19027284-19027404 0.00014 47_[+2]_65 chr2R:6668027-6668147 0.00014 84_[+2]_28 chrX:15482266-15482386 0.00017 75_[+2]_37 chr2L:15771124-15771244 0.00017 84_[+2]_28 chrX:932947-933067 0.00017 108_[+2]_4 chr3L:16347960-16348080 0.00017 41_[+2]_71 chrX:2172416-2172536 0.00019 60_[+2]_52 chr2R:20287055-20287175 0.00019 41_[+2]_71 chr3L:2782148-2782268 0.0002 17_[+2]_95 chrX:8177136-8177256 0.0002 72_[+2]_40 chr2L:3145681-3145801 0.0002 29_[+2]_83 chr2R:7447428-7447548 0.00021 24_[+2]_88 chr2L:13332889-13333009 0.00021 100_[+2]_12 chr2L:16902149-16902269 0.00023 65_[+2]_47 chrX:20393722-20393842 0.00023 25_[+2]_87 chr2L:16738365-16738485 0.00023 33_[+2]_79 chr2L:10671655-10671775 0.00028 58_[+2]_54 chr3R:7085578-7085698 0.0003 51_[+2]_61 chr2R:24603549-24603669 0.00031 100_[+2]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BTGGCARC width=8 seqs=62 chr2L:4387058-4387178 ( 63) CTGGCAGC 1 chr2R:23396688-23396808 ( 53) CTGGCAGC 1 chr2R:12423455-12423575 ( 51) CTGGCAGC 1 chr3R:27928220-27928340 ( 61) CTGGCAGC 1 chr2L:10743895-10744015 ( 47) CTGGCAGC 1 chr2R:19283927-19284047 ( 77) CTGGCAGC 1 chr2R:17748030-17748150 ( 56) CTGGCAGC 1 chr2R:19670542-19670662 ( 48) CTGGCAGC 1 chr2L:2045389-2045509 ( 85) GTGGCAGC 1 chr2R:23402260-23402380 ( 79) GTGGCAGC 1 chrX:7066744-7066864 ( 76) GTGGCAGC 1 chr2L:9460123-9460243 ( 69) TTGGCAGC 1 chr3L:1318334-1318454 ( 84) TTGGCAGC 1 chr2R:12468092-12468212 ( 91) TTGGCAGC 1 chr2R:21251983-21252103 ( 22) TTGGCAGC 1 chr2R:23877622-23877742 ( 99) TTGGCAGC 1 chr2R:9843695-9843815 ( 71) CTGGCAAC 1 chr3L:7640456-7640576 ( 88) CTGGCAAC 1 chrX:7986678-7986798 ( 64) CTGGCAAC 1 chr3R:26966811-26966931 ( 77) CTGCCAGC 1 chr3R:23924302-23924422 ( 75) CGGGCAGC 1 chr3R:8806201-8806321 ( 62) GTGGCAAC 1 chr2L:7856523-7856643 ( 81) GTGGCAAC 1 chr2R:19502960-19503080 ( 71) GTGGCAAC 1 chr3R:29138591-29138711 ( 36) ATGGCAGC 1 chr3R:23159460-23159580 ( 66) ATGGCAGC 1 chr3R:10076770-10076890 ( 55) ATGGCAGC 1 chrX:14603675-14603795 ( 14) GTGGCAAC 1 chr2R:16143044-16143164 ( 59) GTGGCAAC 1 chrX:11129043-11129163 ( 41) ATGGCAGC 1 chr3R:27273270-27273390 ( 12) GTGGCAAC 1 chr3R:27228524-27228644 ( 38) ATGGCAGC 1 chr2L:885128-885248 ( 47) GTGGCAAC 1 chrX:8265391-8265511 ( 87) TTGGCAAC 1 chr3L:5927674-5927794 ( 76) TTGCCAGC 1 chr2L:6127613-6127733 ( 65) CTGGCCGC 1 chr3R:22618404-22618524 ( 75) TTGCCAGC 1 chr3R:5632200-5632320 ( 108) TTGCCAGC 1 chr3R:16180648-16180768 ( 66) TTGCCAGC 1 chr2L:1166413-1166533 ( 78) CTGGCCGC 1 chr3R:14901540-14901660 ( 83) CTGCCAAC 1 chr3L:5133767-5133887 ( 65) CTGCCAAC 1 chr2L:4382687-4382807 ( 47) CGGGCAAC 1 chr3R:19027284-19027404 ( 48) CGGCCAGC 1 chr2R:6668027-6668147 ( 85) ATGGCAAC 1 chrX:15482266-15482386 ( 76) CTGGCCAC 1 chr2L:15771124-15771244 ( 85) TTGCCAAC 1 chrX:932947-933067 ( 109) TTGCCAAC 1 chr3L:16347960-16348080 ( 42) TTGCCAAC 1 chrX:2172416-2172536 ( 61) AGGGCAGC 1 chr2R:20287055-20287175 ( 42) AGGGCAGC 1 chr3L:2782148-2782268 ( 18) TGGGCAAC 1 chrX:8177136-8177256 ( 73) TGGGCAAC 1 chr2L:3145681-3145801 ( 30) TGGGCAAC 1 chr2R:7447428-7447548 ( 25) TGGCCAGC 1 chr2L:13332889-13333009 ( 101) TGGCCAGC 1 chr2L:16902149-16902269 ( 66) GTGCCCGC 1 chrX:20393722-20393842 ( 26) GTGCCCGC 1 chr2L:16738365-16738485 ( 34) GTGCCCGC 1 chr2L:10671655-10671775 ( 59) CTGCCCAC 1 chr3R:7085578-7085698 ( 52) TGGCCAAC 1 chr2R:24603549-24603669 ( 101) ATGGCCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5523 E= 7.8e-021 -105 73 11 3 -1260 -1260 -13 145 -1260 -1260 236 -1260 -1260 50 187 -1260 -1260 229 -1260 -1260 153 -67 -1260 -1260 42 -1260 162 -1260 -1260 229 -1260 -1260 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 62 E= 7.8e-021 0.145161 0.338710 0.209677 0.306452 0.000000 0.000000 0.177419 0.822581 0.000000 0.000000 1.000000 0.000000 0.000000 0.290323 0.709677 0.000000 0.000000 1.000000 0.000000 0.000000 0.870968 0.129032 0.000000 0.000000 0.403226 0.000000 0.596774 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTGGCARC MEME-2 regular expression -------------------------------------------------------------------------------- [CTG]TG[GC]CA[GA]C -------------------------------------------------------------------------------- Time 13.54 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-3 width = 8 sites = 56 llr = 483 E-value = 7.6e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1a:::a:7 pos.-specific C ::1a:::: probability G ::::a::1 matrix T 9:9:::a2 bits 2.4 ** 2.1 ** 1.9 ** 1.7 *** Relative 1.4 ****** Entropy 1.2 ****** (12.4 bits) 0.9 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:2172416-2172536 39 2.93e-05 TCGCGATAGT TATCGATA AGTATATCAA chr2L:11120274-11120394 50 2.93e-05 TGTCTTATGC TATCGATA GCGCCGACTT chrX:15482266-15482386 56 2.93e-05 TAGGAAATTC TATCGATA CTTCGAAGCG chr3L:16139263-16139383 70 2.93e-05 TGCAATTGGT TATCGATA ACTTCAGTTT chrX:1664959-1665079 80 2.93e-05 GGCGACTGGC TATCGATA CTGCTAGTGC chr3R:24719582-24719702 39 2.93e-05 GTTCTGTTCT TATCGATA CGTTTGTGCC chr3R:7131076-7131196 24 2.93e-05 ATATGTCTCG TATCGATA GTAGTTACTA chrX:13154915-13155035 87 2.93e-05 CTGCCGGAAC TATCGATA GCTTCTTTTA chr2L:15771124-15771244 63 2.93e-05 ACCTATCGCT TATCGATA TTTCTAGCAC chrX:6261027-6261147 71 2.93e-05 TTTGCACGCA TATCGATA CTTGATGCCA chr2L:4382687-4382807 85 2.93e-05 ATCGAGCGCT TATCGATA TCAAACGCTG chr3L:20361541-20361661 70 2.93e-05 TGTCAGTTGT TATCGATA GTTTTCTGCT chr3L:3937973-3938093 63 2.93e-05 GCAACCGCTC TATCGATA TTTCTTACAG chr2L:3145681-3145801 75 2.93e-05 AACTCTCAGC TATCGATA GCGTGCGAAC chr3L:174671-174791 19 2.93e-05 GCTTAGTATG TATCGATA GTAATCGATA chrX:15328264-15328384 26 2.93e-05 GGCGAAGTGA TATCGATA ACACGCGCGG chr3R:20634980-20635100 49 2.93e-05 ATTTAAATAA TATCGATA TTACTGTTGT chr2L:10743895-10744015 69 2.93e-05 TCTTAAATGA TATCGATA GCGATGCTTC chr3R:24922434-24922554 8 2.93e-05 TTTCGTT TATCGATA CCAGTTAGTG chr2R:7711998-7712118 71 2.93e-05 AGCAATTATT TATCGATA AGACGGCAAA chr2L:19063167-19063287 90 2.93e-05 CGAGCAATGT TATCGATA AAACCTATTT chr3R:24717397-24717517 75 2.93e-05 GTTTTTGTGT TATCGATA CATTGTAATG chr2L:10476995-10477115 95 2.93e-05 TTCGCGCGCT TATCGATA GGCAATGTTT chrX:11129043-11129163 70 2.93e-05 CTACGCGCGT TATCGATA TCGAAAGCTG chr2L:19518666-19518786 47 2.93e-05 GCCATGTATC TATCGATA AGCAACGTAA chr3R:27283715-27283835 35 5.85e-05 AGCCATCGAT TATCGATT ACCGCGCAAT chrX:10220010-10220130 37 5.85e-05 ACACTTGCAA TATCGATT GTCGATAGGC chr3L:20393535-20393655 18 5.85e-05 ACAAATGGTA TATCGATT ATTTCACTCT chr2R:16142102-16142222 70 5.85e-05 TCAATCGATC TATCGATT AACAGTCAGC chrX:6683731-6683851 70 5.85e-05 CGATAGTCAT TATCGATT CTAAAGATAT chr2L:5525789-5525909 79 5.85e-05 TCTTATCGTT TATCGATT GCCCTGCATT chr2R:10112195-10112315 88 5.85e-05 GCTTAAAAAG TATCGATT TAACATCGAT chr3R:23924302-23924422 66 5.85e-05 TCAAATGAGT TATCGATT ACGGGCAGCT chr2L:21397445-21397565 109 5.85e-05 agtaaaaatc tatcgatt atga chr3L:4136013-4136133 80 5.85e-05 TTTTTACATT TATCGATT TCTTAGCAAC chr2R:9822932-9823052 86 5.85e-05 ATAGCACGCT TATCGATT TCATTTACAG chr2L:1704835-1704955 10 1.07e-04 CGGGTAAGA AATCGATA TACCAAATCG chrX:16587776-16587896 76 1.07e-04 GAATTTACGC TATCGATG AAAGAAACCA chrX:12765224-12765344 7 1.07e-04 TCGGAA AATCGATA AAAACATCGA chr3L:21441393-21441513 13 1.07e-04 ACGATAGAAC AATCGATA CTAATGGGCT chr2L:2969636-2969756 48 1.07e-04 CGATTACATT TATCGATG TCGACCGGTT chr3R:18230381-18230501 33 1.07e-04 AGCTCGCGCC AATCGATA GGTGTCCGTT chr2R:24661366-24661486 66 1.07e-04 TCCATTAGGT AATCGATA AGTGCTTTGC chr2L:1166413-1166533 99 1.07e-04 GCGTTATCGT TATCGATG ACCAAATAAT chr2R:9400267-9400387 67 1.27e-04 CACTAAAATA TACCGATA TACCTCGCGA chrX:20393722-20393842 52 1.27e-04 TCGCCCAGAA TACCGATA GTCGCCACGA chrX:19762337-19762457 18 1.47e-04 AGCGCGGACC TATCGATC GACAGCTCGT chr2L:4387058-4387178 24 1.47e-04 ACCTGTCCGC TATCGATC TCAATGCTAT chr2L:4442330-4442450 18 1.67e-04 GATAAAATGC CATCGATA TATTTCTGGT chrX:9085840-9085960 54 1.67e-04 CCAACCAACT CATCGATA GCTCTTCGAT chrX:12496670-12496790 36 1.96e-04 CCAGGTAACC AATCGATT ATATACCGAA chrX:1460653-1460773 25 2.55e-04 AGTCGAAAGA TATCGAAA ACAGTGCTGC chr3R:13271989-13272109 95 2.55e-04 CCCTATAAAA TATCGAAA ATAACGGATT chrX:16881033-16881153 59 2.55e-04 CGACTGTTGA TTTCGATA GGTGTTTAAA chr3R:5632200-5632320 63 2.55e-04 AGAGAGAGCT TTTCGATA AGCTTTTCCG chr2R:24603549-24603669 16 2.74e-04 TCGATAACGA TACCGATT AGTCAGTGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:2172416-2172536 2.9e-05 38_[+3]_74 chr2L:11120274-11120394 2.9e-05 49_[+3]_63 chrX:15482266-15482386 2.9e-05 55_[+3]_57 chr3L:16139263-16139383 2.9e-05 69_[+3]_43 chrX:1664959-1665079 2.9e-05 79_[+3]_33 chr3R:24719582-24719702 2.9e-05 38_[+3]_74 chr3R:7131076-7131196 2.9e-05 23_[+3]_89 chrX:13154915-13155035 2.9e-05 86_[+3]_26 chr2L:15771124-15771244 2.9e-05 62_[+3]_50 chrX:6261027-6261147 2.9e-05 70_[+3]_42 chr2L:4382687-4382807 2.9e-05 84_[+3]_28 chr3L:20361541-20361661 2.9e-05 69_[+3]_43 chr3L:3937973-3938093 2.9e-05 62_[+3]_50 chr2L:3145681-3145801 2.9e-05 74_[+3]_38 chr3L:174671-174791 2.9e-05 18_[+3]_94 chrX:15328264-15328384 2.9e-05 25_[+3]_87 chr3R:20634980-20635100 2.9e-05 48_[+3]_64 chr2L:10743895-10744015 2.9e-05 68_[+3]_44 chr3R:24922434-24922554 2.9e-05 7_[+3]_105 chr2R:7711998-7712118 2.9e-05 70_[+3]_42 chr2L:19063167-19063287 2.9e-05 89_[+3]_23 chr3R:24717397-24717517 2.9e-05 74_[+3]_38 chr2L:10476995-10477115 2.9e-05 94_[+3]_18 chrX:11129043-11129163 2.9e-05 69_[+3]_43 chr2L:19518666-19518786 2.9e-05 46_[+3]_66 chr3R:27283715-27283835 5.8e-05 34_[+3]_78 chrX:10220010-10220130 5.8e-05 36_[+3]_76 chr3L:20393535-20393655 5.8e-05 17_[+3]_95 chr2R:16142102-16142222 5.8e-05 69_[+3]_43 chrX:6683731-6683851 5.8e-05 69_[+3]_43 chr2L:5525789-5525909 5.8e-05 78_[+3]_34 chr2R:10112195-10112315 5.8e-05 87_[+3]_25 chr3R:23924302-23924422 5.8e-05 65_[+3]_47 chr2L:21397445-21397565 5.8e-05 108_[+3]_4 chr3L:4136013-4136133 5.8e-05 79_[+3]_33 chr2R:9822932-9823052 5.8e-05 85_[+3]_27 chr2L:1704835-1704955 0.00011 9_[+3]_103 chrX:16587776-16587896 0.00011 75_[+3]_37 chrX:12765224-12765344 0.00011 6_[+3]_106 chr3L:21441393-21441513 0.00011 12_[+3]_100 chr2L:2969636-2969756 0.00011 47_[+3]_65 chr3R:18230381-18230501 0.00011 32_[+3]_80 chr2R:24661366-24661486 0.00011 65_[+3]_47 chr2L:1166413-1166533 0.00011 98_[+3]_14 chr2R:9400267-9400387 0.00013 66_[+3]_46 chrX:20393722-20393842 0.00013 51_[+3]_61 chrX:19762337-19762457 0.00015 17_[+3]_95 chr2L:4387058-4387178 0.00015 23_[+3]_89 chr2L:4442330-4442450 0.00017 17_[+3]_95 chrX:9085840-9085960 0.00017 53_[+3]_59 chrX:12496670-12496790 0.0002 35_[+3]_77 chrX:1460653-1460773 0.00025 24_[+3]_88 chr3R:13271989-13272109 0.00025 94_[+3]_18 chrX:16881033-16881153 0.00025 58_[+3]_54 chr3R:5632200-5632320 0.00025 62_[+3]_50 chr2R:24603549-24603669 0.00027 15_[+3]_97 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=56 chrX:2172416-2172536 ( 39) TATCGATA 1 chr2L:11120274-11120394 ( 50) TATCGATA 1 chrX:15482266-15482386 ( 56) TATCGATA 1 chr3L:16139263-16139383 ( 70) TATCGATA 1 chrX:1664959-1665079 ( 80) TATCGATA 1 chr3R:24719582-24719702 ( 39) TATCGATA 1 chr3R:7131076-7131196 ( 24) TATCGATA 1 chrX:13154915-13155035 ( 87) TATCGATA 1 chr2L:15771124-15771244 ( 63) TATCGATA 1 chrX:6261027-6261147 ( 71) TATCGATA 1 chr2L:4382687-4382807 ( 85) TATCGATA 1 chr3L:20361541-20361661 ( 70) TATCGATA 1 chr3L:3937973-3938093 ( 63) TATCGATA 1 chr2L:3145681-3145801 ( 75) TATCGATA 1 chr3L:174671-174791 ( 19) TATCGATA 1 chrX:15328264-15328384 ( 26) TATCGATA 1 chr3R:20634980-20635100 ( 49) TATCGATA 1 chr2L:10743895-10744015 ( 69) TATCGATA 1 chr3R:24922434-24922554 ( 8) TATCGATA 1 chr2R:7711998-7712118 ( 71) TATCGATA 1 chr2L:19063167-19063287 ( 90) TATCGATA 1 chr3R:24717397-24717517 ( 75) TATCGATA 1 chr2L:10476995-10477115 ( 95) TATCGATA 1 chrX:11129043-11129163 ( 70) TATCGATA 1 chr2L:19518666-19518786 ( 47) TATCGATA 1 chr3R:27283715-27283835 ( 35) TATCGATT 1 chrX:10220010-10220130 ( 37) TATCGATT 1 chr3L:20393535-20393655 ( 18) TATCGATT 1 chr2R:16142102-16142222 ( 70) TATCGATT 1 chrX:6683731-6683851 ( 70) TATCGATT 1 chr2L:5525789-5525909 ( 79) TATCGATT 1 chr2R:10112195-10112315 ( 88) TATCGATT 1 chr3R:23924302-23924422 ( 66) TATCGATT 1 chr2L:21397445-21397565 ( 109) TATCGATT 1 chr3L:4136013-4136133 ( 80) TATCGATT 1 chr2R:9822932-9823052 ( 86) TATCGATT 1 chr2L:1704835-1704955 ( 10) AATCGATA 1 chrX:16587776-16587896 ( 76) TATCGATG 1 chrX:12765224-12765344 ( 7) AATCGATA 1 chr3L:21441393-21441513 ( 13) AATCGATA 1 chr2L:2969636-2969756 ( 48) TATCGATG 1 chr3R:18230381-18230501 ( 33) AATCGATA 1 chr2R:24661366-24661486 ( 66) AATCGATA 1 chr2L:1166413-1166533 ( 99) TATCGATG 1 chr2R:9400267-9400387 ( 67) TACCGATA 1 chrX:20393722-20393842 ( 52) TACCGATA 1 chrX:19762337-19762457 ( 18) TATCGATC 1 chr2L:4387058-4387178 ( 24) TATCGATC 1 chr2L:4442330-4442450 ( 18) CATCGATA 1 chrX:9085840-9085960 ( 54) CATCGATA 1 chrX:12496670-12496790 ( 36) AATCGATT 1 chrX:1460653-1460773 ( 25) TATCGAAA 1 chr3R:13271989-13272109 ( 95) TATCGAAA 1 chrX:16881033-16881153 ( 59) TTTCGATA 1 chr3R:5632200-5632320 ( 63) TTTCGATA 1 chr2R:24603549-24603669 ( 16) TACCGATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.58245 E= 7.6e-020 -149 -252 -1245 151 168 -1245 -1245 -307 -1245 -193 -1245 166 -1245 229 -1245 -1245 -1245 -1245 236 -1245 173 -1245 -1245 -1245 -307 -1245 -1245 168 117 -252 -186 -37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 56 E= 7.6e-020 0.107143 0.035714 0.000000 0.857143 0.964286 0.000000 0.000000 0.035714 0.000000 0.053571 0.000000 0.946429 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.035714 0.000000 0.000000 0.964286 0.678571 0.035714 0.053571 0.232143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 regular expression -------------------------------------------------------------------------------- TATCGAT[AT] -------------------------------------------------------------------------------- Time 19.45 secs. ******************************************************************************** ******************************************************************************** MOTIF RACCGTTA MEME-4 width = 8 sites = 81 llr = 629 E-value = 1.1e-019 ******************************************************************************** -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 57:::::7 pos.-specific C ::a8:::: probability G 32:2a::1 matrix T 1::::aa2 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * * * Relative 1.4 * *** Entropy 1.2 ***** (11.2 bits) 0.9 ****** 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AACCGTTA consensus GG T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:21529311-21529431 44 2.00e-05 TGCACTTTTT AACCGTTA AAAATTGAGA chr3R:29138591-29138711 68 2.00e-05 CACCGGCCAT AACCGTTA CTTTATCTAC chr3R:29138795-29138915 113 2.00e-05 TTCAGTTCTC AACCGTTA chr2R:8051928-8052048 108 2.00e-05 AGATTTTTTC AACCGTTA GCGGA chr2R:7447428-7447548 4 2.00e-05 ATA AACCGTTA GTTGGCTCGA chr3L:12193691-12193811 83 2.00e-05 CAATTACGTT AACCGTTA GCCAACGTAA chr2R:16143044-16143164 26 2.00e-05 TAAAAATAAA AACCGTTA TCAAGCCATT chrX:11129043-11129163 107 2.00e-05 AAAGCCGAAA AACCGTTA AATACA chr3R:16180648-16180768 94 2.00e-05 ATAAATACAA AACCGTTA AAGGCGGTAA chr2L:4387058-4387178 85 3.29e-05 CTCTGCTATT GACCGTTA ATAACGGTGT chr3R:12723957-12724077 109 3.29e-05 TTCTGAAAAC GACCGTTA TTTA chrX:2727592-2727712 13 3.29e-05 AGTTAACAGC GACCGTTA AGTTTCAATT chr2L:16902149-16902269 78 3.29e-05 GCCCGCCCTT GACCGTTA AAAATACCAT chrX:13154915-13155035 24 3.29e-05 TGCTAGGAAC GACCGTTA GGGACAATAA chr3R:17449530-17449650 3 3.29e-05 CA GACCGTTA CTTGAAAGCA chr3R:16436547-16436667 109 3.29e-05 AACCTGTATT GACCGTTA TTTT chr2R:16149811-16149931 49 3.29e-05 GTAATTAAAG GACCGTTA CATTACATGC chr2L:19530273-19530393 80 3.29e-05 CAACACTAGC GACCGTTA GAAACAACAC chrX:7074470-7074590 67 3.29e-05 CTATGAAAAC GACCGTTA CTTTTGCGTT chrX:18018543-18018663 68 3.29e-05 CGGGTATAAT GACCGTTA CACACATGGT chr3R:12219702-12219822 89 4.58e-05 GTCATGTGCA AGCCGTTA CATTTCAATA chrX:932947-933067 23 4.58e-05 GCTGAAACCT AGCCGTTA GAATTCGATT chrX:17532343-17532463 21 4.58e-05 AGAACGAGCA AGCCGTTA CCCTTTTAAA chr3R:8726741-8726861 28 4.58e-05 AATTAGTAGC AGCCGTTA CGATTTAGTG chr2R:17748030-17748150 99 4.58e-05 CATTTGAATT AGCCGTTA CAAAATACCA chr2R:23877622-23877742 35 4.58e-05 CGCCCTAGAA AGCCGTTA TAAACTTGGT chr2R:19670542-19670662 4 4.58e-05 AAT AGCCGTTA TAAAGATTAG chr2R:9822932-9823052 102 4.58e-05 TTTCATTTAC AGCCGTTA CAATTATTTA chrX:2172416-2172536 5 5.41e-05 ATTC GGCCGTTA CTATATCAAC chr2L:16738365-16738485 55 5.41e-05 ATACTGGCAA GGCCGTTA AATAAATCAG chr2R:16583363-16583483 58 5.41e-05 TGTTTGCGGC GGCCGTTA GGAATTTGAA chr3L:4092848-4092968 49 7.41e-05 AAGCTTGAGG AACCGTTT CACTGCTTCA chr2L:2045389-2045509 3 7.41e-05 AA AACCGTTT GGTTTTATAA chr3R:10815168-10815288 16 7.41e-05 AAATTTCCCT AACCGTTT CACCAGAGAT chr3R:23924302-23924422 22 7.41e-05 AATTTCAAAA AACCGTTT TCCATTAGGG chr2L:2969636-2969756 101 7.41e-05 ATTTAAATCC AACCGTTT TTGGCCAATA chr2R:24661366-24661486 113 7.41e-05 CGATCAAGCC AACCGTTT chr2L:9460123-9460243 81 1.26e-04 GGCAGCTTGT AACGGTTA TTCACGACAA chrX:15482266-15482386 22 1.26e-04 TTTTCAAATA TACCGTTA TTTATCAACG chr3L:1318334-1318454 25 1.26e-04 TGATCGCAGT AACGGTTA AGCTTTAAAC chr2L:13021542-13021662 83 1.26e-04 TATACCGCTA TACCGTTA CGCAGGCTAC chr3R:30000412-30000532 73 1.26e-04 ACCTCTGGAC TACCGTTA TTTCGTCAGC chr2L:21220550-21220670 91 1.26e-04 ATGCCATATA TACCGTTA AATCATTTGT chr3L:4136013-4136133 52 1.26e-04 GCCAAAACAC AACGGTTA GGCCTGGTAT chrX:19276877-19276997 101 1.26e-04 ACTGTGACAT TACCGTTA AGTATTAAAC chr2R:23878342-23878462 102 1.38e-04 CAAGCGAGGC GACGGTTA TAGATAATAT chr3L:4532221-4532341 100 1.51e-04 GTGGACACCG AACCGTTG GGAATTTAAA chr3L:15072289-15072409 3 1.51e-04 CC AACCGTTG GATTTGAAAT chr3R:13271989-13272109 20 1.59e-04 GCACCAGTGT GACCGTTG AGTCCCGATT chr2R:19283927-19284047 30 1.59e-04 AATGCAGTGT GACCGTTG TTGTCATTGA chrX:644087-644207 61 1.59e-04 AAAGAACGTT GACCGTTG AACGTTTTTG chr3L:12203968-12204088 80 1.80e-04 CTTTTATTTT GGCCGTTT TCGAGTATAA chr3L:9629975-9630095 93 2.05e-04 GCAGGTGTTT TGCCGTTA TCGCCACACA chrX:17622883-17623003 94 2.05e-04 AATTCAAATT TGCCGTTA AACATTTTAA chr3R:27651839-27651959 5 2.05e-04 AATT TGCCGTTA GGTTGCCGTC chr2R:9039573-9039693 111 2.13e-04 TTTTTTCGAA GGCGGTTA AA chr3R:25235496-25235616 104 2.13e-04 ACCAGTCAAA GGCGGTTA CAATTCAAT chrX:6683731-6683851 11 2.66e-04 GCAGGTGAAT AACGGTTT TTAGTTTTTG chr3R:23159460-23159580 79 2.66e-04 GCAGCGCTCT AACGGTTT TTTAAATTTT chr2L:6127613-6127733 78 2.66e-04 GCCGCTTGCC AACGGTTT TTAAAGTGCA chr3R:13471497-13471617 101 2.66e-04 TGCCGAATTT AACGGTTT CTTTGCGGCA chr3R:27928220-27928340 15 2.66e-04 TCTGTAATCT AACGGTTT TTATCCTTTT chr2R:23402260-23402380 99 2.66e-04 TGTGTGCTGC AACGGTTT CACTGAGTTG chr2L:10476995-10477115 5 2.66e-04 CGAA AACGGTTT CGAGTGGCTT chr3R:29816424-29816544 50 2.66e-04 CTAATGAATT TACCGTTT AATGCACAGA chr2L:885128-885248 82 2.66e-04 ACCACAACGT AACGGTTT AGCATTTGAA chrX:12496670-12496790 17 3.22e-04 GTTTTTGAAT TACCGTTG CCCAGGTAAC chrX:6261027-6261147 15 3.22e-04 AAAGATAAAT TACCGTTG CCAAAACATC chr3L:3252122-3252242 31 3.22e-04 AAAAGTATAC AACGGTTG CACTGCTTGT chrX:13811554-13811674 61 3.43e-04 CCGCACTGTT AACCGCTA ACAGCTCACT chr3R:5632200-5632320 44 3.43e-04 TGAAAATTCC AACCGCTA GAGAGAGAGC chr2L:3648233-3648353 14 3.72e-04 AATTCGGTTA ATCCGTTA CATTTCTGAA chrX:16587776-16587896 48 3.72e-04 CTTATACCGA ATCCGTTA TATTATCGAG chr3L:1970102-1970222 10 3.72e-04 GGATGGTGT GACCGCTA ATATGCCACC chr2L:15771124-15771244 102 4.39e-04 CTTACTTGCT AACTGTTA CTTTTCATAA chrX:1523438-1523558 90 4.39e-04 ATTAACTTGT TGCCGTTT AATTCAAACA chr3L:17806531-17806651 58 4.39e-04 GTCGTTATGG AACTGTTA GGCTTAAACT chrX:927679-927799 16 4.39e-04 TAACGGTAGA AACTGTTA ACTTTACTTT chr3R:18230381-18230501 44 4.39e-04 ATCGATAGGT GTCCGTTA TAAATTACGA chr2L:4382687-4382807 108 4.66e-04 CGCTGTAATC GACTGTTA TAACT chr3L:5133767-5133887 45 4.66e-04 AATTTAAGCA GGCGGTTT GAAAATGCCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:21529311-21529431 2e-05 43_[+4]_69 chr3R:29138591-29138711 2e-05 67_[+4]_45 chr3R:29138795-29138915 2e-05 112_[+4] chr2R:8051928-8052048 2e-05 107_[+4]_5 chr2R:7447428-7447548 2e-05 3_[+4]_109 chr3L:12193691-12193811 2e-05 82_[+4]_30 chr2R:16143044-16143164 2e-05 25_[+4]_87 chrX:11129043-11129163 2e-05 106_[+4]_6 chr3R:16180648-16180768 2e-05 93_[+4]_19 chr2L:4387058-4387178 3.3e-05 84_[+4]_28 chr3R:12723957-12724077 3.3e-05 108_[+4]_4 chrX:2727592-2727712 3.3e-05 12_[+4]_100 chr2L:16902149-16902269 3.3e-05 77_[+4]_35 chrX:13154915-13155035 3.3e-05 23_[+4]_89 chr3R:17449530-17449650 3.3e-05 2_[+4]_110 chr3R:16436547-16436667 3.3e-05 108_[+4]_4 chr2R:16149811-16149931 3.3e-05 48_[+4]_64 chr2L:19530273-19530393 3.3e-05 79_[+4]_33 chrX:7074470-7074590 3.3e-05 66_[+4]_46 chrX:18018543-18018663 3.3e-05 67_[+4]_45 chr3R:12219702-12219822 4.6e-05 88_[+4]_24 chrX:932947-933067 4.6e-05 22_[+4]_90 chrX:17532343-17532463 4.6e-05 20_[+4]_92 chr3R:8726741-8726861 4.6e-05 27_[+4]_85 chr2R:17748030-17748150 4.6e-05 98_[+4]_14 chr2R:23877622-23877742 4.6e-05 34_[+4]_78 chr2R:19670542-19670662 4.6e-05 3_[+4]_109 chr2R:9822932-9823052 4.6e-05 101_[+4]_11 chrX:2172416-2172536 5.4e-05 4_[+4]_108 chr2L:16738365-16738485 5.4e-05 54_[+4]_58 chr2R:16583363-16583483 5.4e-05 57_[+4]_55 chr3L:4092848-4092968 7.4e-05 48_[+4]_64 chr2L:2045389-2045509 7.4e-05 2_[+4]_110 chr3R:10815168-10815288 7.4e-05 15_[+4]_97 chr3R:23924302-23924422 7.4e-05 21_[+4]_91 chr2L:2969636-2969756 7.4e-05 100_[+4]_12 chr2R:24661366-24661486 7.4e-05 112_[+4] chr2L:9460123-9460243 0.00013 80_[+4]_32 chrX:15482266-15482386 0.00013 21_[+4]_91 chr3L:1318334-1318454 0.00013 24_[+4]_88 chr2L:13021542-13021662 0.00013 82_[+4]_30 chr3R:30000412-30000532 0.00013 72_[+4]_40 chr2L:21220550-21220670 0.00013 90_[+4]_22 chr3L:4136013-4136133 0.00013 51_[+4]_61 chrX:19276877-19276997 0.00013 100_[+4]_12 chr2R:23878342-23878462 0.00014 101_[+4]_11 chr3L:4532221-4532341 0.00015 99_[+4]_13 chr3L:15072289-15072409 0.00015 2_[+4]_110 chr3R:13271989-13272109 0.00016 19_[+4]_93 chr2R:19283927-19284047 0.00016 29_[+4]_83 chrX:644087-644207 0.00016 60_[+4]_52 chr3L:12203968-12204088 0.00018 79_[+4]_33 chr3L:9629975-9630095 0.00021 92_[+4]_20 chrX:17622883-17623003 0.00021 93_[+4]_19 chr3R:27651839-27651959 0.00021 4_[+4]_108 chr2R:9039573-9039693 0.00021 110_[+4]_2 chr3R:25235496-25235616 0.00021 103_[+4]_9 chrX:6683731-6683851 0.00027 10_[+4]_102 chr3R:23159460-23159580 0.00027 78_[+4]_34 chr2L:6127613-6127733 0.00027 77_[+4]_35 chr3R:13471497-13471617 0.00027 100_[+4]_12 chr3R:27928220-27928340 0.00027 14_[+4]_98 chr2R:23402260-23402380 0.00027 98_[+4]_14 chr2L:10476995-10477115 0.00027 4_[+4]_108 chr3R:29816424-29816544 0.00027 49_[+4]_63 chr2L:885128-885248 0.00027 81_[+4]_31 chrX:12496670-12496790 0.00032 16_[+4]_96 chrX:6261027-6261147 0.00032 14_[+4]_98 chr3L:3252122-3252242 0.00032 30_[+4]_82 chrX:13811554-13811674 0.00034 60_[+4]_52 chr3R:5632200-5632320 0.00034 43_[+4]_69 chr2L:3648233-3648353 0.00037 13_[+4]_99 chrX:16587776-16587896 0.00037 47_[+4]_65 chr3L:1970102-1970222 0.00037 9_[+4]_103 chr2L:15771124-15771244 0.00044 101_[+4]_11 chrX:1523438-1523558 0.00044 89_[+4]_23 chr3L:17806531-17806651 0.00044 57_[+4]_55 chrX:927679-927799 0.00044 15_[+4]_97 chr3R:18230381-18230501 0.00044 43_[+4]_69 chr2L:4382687-4382807 0.00047 107_[+4]_5 chr3L:5133767-5133887 0.00047 44_[+4]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RACCGTTA width=8 seqs=81 chr3L:21529311-21529431 ( 44) AACCGTTA 1 chr3R:29138591-29138711 ( 68) AACCGTTA 1 chr3R:29138795-29138915 ( 113) AACCGTTA 1 chr2R:8051928-8052048 ( 108) AACCGTTA 1 chr2R:7447428-7447548 ( 4) AACCGTTA 1 chr3L:12193691-12193811 ( 83) AACCGTTA 1 chr2R:16143044-16143164 ( 26) AACCGTTA 1 chrX:11129043-11129163 ( 107) AACCGTTA 1 chr3R:16180648-16180768 ( 94) AACCGTTA 1 chr2L:4387058-4387178 ( 85) GACCGTTA 1 chr3R:12723957-12724077 ( 109) GACCGTTA 1 chrX:2727592-2727712 ( 13) GACCGTTA 1 chr2L:16902149-16902269 ( 78) GACCGTTA 1 chrX:13154915-13155035 ( 24) GACCGTTA 1 chr3R:17449530-17449650 ( 3) GACCGTTA 1 chr3R:16436547-16436667 ( 109) GACCGTTA 1 chr2R:16149811-16149931 ( 49) GACCGTTA 1 chr2L:19530273-19530393 ( 80) GACCGTTA 1 chrX:7074470-7074590 ( 67) GACCGTTA 1 chrX:18018543-18018663 ( 68) GACCGTTA 1 chr3R:12219702-12219822 ( 89) AGCCGTTA 1 chrX:932947-933067 ( 23) AGCCGTTA 1 chrX:17532343-17532463 ( 21) AGCCGTTA 1 chr3R:8726741-8726861 ( 28) AGCCGTTA 1 chr2R:17748030-17748150 ( 99) AGCCGTTA 1 chr2R:23877622-23877742 ( 35) AGCCGTTA 1 chr2R:19670542-19670662 ( 4) AGCCGTTA 1 chr2R:9822932-9823052 ( 102) AGCCGTTA 1 chrX:2172416-2172536 ( 5) GGCCGTTA 1 chr2L:16738365-16738485 ( 55) GGCCGTTA 1 chr2R:16583363-16583483 ( 58) GGCCGTTA 1 chr3L:4092848-4092968 ( 49) AACCGTTT 1 chr2L:2045389-2045509 ( 3) AACCGTTT 1 chr3R:10815168-10815288 ( 16) AACCGTTT 1 chr3R:23924302-23924422 ( 22) AACCGTTT 1 chr2L:2969636-2969756 ( 101) AACCGTTT 1 chr2R:24661366-24661486 ( 113) AACCGTTT 1 chr2L:9460123-9460243 ( 81) AACGGTTA 1 chrX:15482266-15482386 ( 22) TACCGTTA 1 chr3L:1318334-1318454 ( 25) AACGGTTA 1 chr2L:13021542-13021662 ( 83) TACCGTTA 1 chr3R:30000412-30000532 ( 73) TACCGTTA 1 chr2L:21220550-21220670 ( 91) TACCGTTA 1 chr3L:4136013-4136133 ( 52) AACGGTTA 1 chrX:19276877-19276997 ( 101) TACCGTTA 1 chr2R:23878342-23878462 ( 102) GACGGTTA 1 chr3L:4532221-4532341 ( 100) AACCGTTG 1 chr3L:15072289-15072409 ( 3) AACCGTTG 1 chr3R:13271989-13272109 ( 20) GACCGTTG 1 chr2R:19283927-19284047 ( 30) GACCGTTG 1 chrX:644087-644207 ( 61) GACCGTTG 1 chr3L:12203968-12204088 ( 80) GGCCGTTT 1 chr3L:9629975-9630095 ( 93) TGCCGTTA 1 chrX:17622883-17623003 ( 94) TGCCGTTA 1 chr3R:27651839-27651959 ( 5) TGCCGTTA 1 chr2R:9039573-9039693 ( 111) GGCGGTTA 1 chr3R:25235496-25235616 ( 104) GGCGGTTA 1 chrX:6683731-6683851 ( 11) AACGGTTT 1 chr3R:23159460-23159580 ( 79) AACGGTTT 1 chr2L:6127613-6127733 ( 78) AACGGTTT 1 chr3R:13471497-13471617 ( 101) AACGGTTT 1 chr3R:27928220-27928340 ( 15) AACGGTTT 1 chr2R:23402260-23402380 ( 99) AACGGTTT 1 chr2L:10476995-10477115 ( 5) AACGGTTT 1 chr3R:29816424-29816544 ( 50) TACCGTTT 1 chr2L:885128-885248 ( 82) AACGGTTT 1 chrX:12496670-12496790 ( 17) TACCGTTG 1 chrX:6261027-6261147 ( 15) TACCGTTG 1 chr3L:3252122-3252242 ( 31) AACGGTTG 1 chrX:13811554-13811674 ( 61) AACCGCTA 1 chr3R:5632200-5632320 ( 44) AACCGCTA 1 chr2L:3648233-3648353 ( 14) ATCCGTTA 1 chrX:16587776-16587896 ( 48) ATCCGTTA 1 chr3L:1970102-1970222 ( 10) GACCGCTA 1 chr2L:15771124-15771244 ( 102) AACTGTTA 1 chrX:1523438-1523558 ( 90) TGCCGTTT 1 chr3L:17806531-17806651 ( 58) AACTGTTA 1 chrX:927679-927799 ( 16) AACTGTTA 1 chr3R:18230381-18230501 ( 44) GTCCGTTA 1 chr2L:4382687-4382807 ( 108) GACTGTTA 1 chr3L:5133767-5133887 ( 45) GGCGGTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.3984 E= 1.1e-019 85 -1298 67 -102 128 -1298 27 -302 -1298 229 -1298 -1298 -1298 188 2 -260 -1298 -1298 236 -1298 -1298 -247 -1298 168 -1298 -1298 -1298 174 117 -1298 -98 -43 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 81 E= 1.1e-019 0.543210 0.000000 0.308642 0.148148 0.728395 0.000000 0.234568 0.037037 0.000000 1.000000 0.000000 0.000000 0.000000 0.753086 0.197531 0.049383 0.000000 0.000000 1.000000 0.000000 0.000000 0.037037 0.000000 0.962963 0.000000 0.000000 0.000000 1.000000 0.679012 0.000000 0.098765 0.222222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RACCGTTA MEME-4 regular expression -------------------------------------------------------------------------------- [AG][AG]CCGTT[AT] -------------------------------------------------------------------------------- Time 25.22 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCTGTT MEME-5 width = 8 sites = 31 llr = 292 E-value = 5.1e-008 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::::2: pos.-specific C a::a:::1 probability G ::a::911 matrix T ::::a178 bits 2.4 ** 2.1 * ** 1.9 * ** * 1.7 ****** Relative 1.4 ****** Entropy 1.2 ****** (13.6 bits) 0.9 ****** * 0.7 ****** * 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CAGCTGTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:11120274-11120394 32 1.29e-05 TGACAGGCAC CAGCTGTT TGTCTTATGC chrX:10220010-10220130 86 1.29e-05 CTAAAAAACA CAGCTGTT TACATCGCTC chr2R:16142102-16142222 84 1.29e-05 GATTAACAGT CAGCTGTT TACGTCTTGC chr3L:2782148-2782268 74 1.29e-05 AATGTCCGAA CAGCTGTT TACAATGAAG chr3R:20831102-20831222 39 1.29e-05 CTACAGCGAT CAGCTGTT GGCGACCGCA chr2R:12423455-12423575 99 1.29e-05 GCTGTCAGAT CAGCTGTT GTTGTTTCCA chr2L:5525789-5525909 102 1.29e-05 GCATTGCGCT CAGCTGTT CGGTTTGGTC chr2L:10743895-10744015 12 1.29e-05 GATTCTGCAT CAGCTGTT TGAGTTCTGA chr2R:23402260-23402380 37 1.29e-05 TGATAGAGGT CAGCTGTT AGAGTGGCCA chr3R:13699487-13699607 54 1.29e-05 TGTCAGCAGT CAGCTGTT CGTCGCTCGC chr2R:16143044-16143164 96 1.29e-05 TGCCGACAAC CAGCTGTT GCTCACAAGC chr2L:12048883-12049003 54 1.29e-05 GACGGCTAAA CAGCTGTT CAACAGTGTG chr2L:4818167-4818287 47 2.58e-05 ATTAAATAAA CAGCTGAT GGACTCAATG chr2L:2045389-2045509 47 2.58e-05 CCTGCTGCCA CAGCTGAT CGCCGAGTGC chr3R:16436547-16436667 31 2.58e-05 AAACAAGCGA CAGCTGAT TTCCAAGTGC chr3R:5632200-5632320 84 2.58e-05 TTTTCCGCCA CAGCTGAT GTGGAAAAGC chr3L:4003369-4003489 101 2.58e-05 GTCACACAAC CAGCTGAT TGCGTTTTCG chr3L:2780815-2780935 72 2.58e-05 TTTCTGTAAA CAGCTGAT TGCTTGCTAT chr3R:14259955-14260075 36 3.41e-05 TAACATTGAA CAGCTGTG CCACCAGTGC chrX:1460653-1460773 1 3.41e-05 . CAGCTGTG CCTTCCAGTC chr3L:20361541-20361661 54 3.41e-05 TGGCAAATAT CAGCTGTG TCAGTTGTTA chr3R:19027284-19027404 86 4.28e-05 TCACACTGCG CAGCTGTC AGAAGTCCAG chr3R:10815168-10815288 74 4.28e-05 AATTTTAAAA CAGCTGTC CCGCTGGCGC chr2L:19530273-19530393 15 4.28e-05 TTACTGGAAA CAGCTGTC TATTACAGTG chr2L:6100214-6100334 90 5.12e-05 CAACAAAGCC CAGCTGGT GCTCACCGAT chr2R:7447428-7447548 97 5.12e-05 CAATCACAAG CAGCTGGT TCAAAATTGT chr3L:3050279-3050399 51 7.98e-05 ACGCAAATGA CAGCTTTT AGAGAGTTTC chr3L:3252122-3252242 60 7.98e-05 AAAGCTTGAA CAGCTTTT CTAAGAAACT chrX:9502409-9502529 35 7.98e-05 TAAACGACCA CAGCTTTT AGCCAGCATT chr2R:19670542-19670662 65 7.98e-05 CACCATCAAA CAGCTGCT TGCTATCGAC chr2L:10206901-10207021 111 1.09e-04 TACCAAAAAA GAGCTGTT TC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:11120274-11120394 1.3e-05 31_[+5]_81 chrX:10220010-10220130 1.3e-05 85_[+5]_27 chr2R:16142102-16142222 1.3e-05 83_[+5]_29 chr3L:2782148-2782268 1.3e-05 73_[+5]_39 chr3R:20831102-20831222 1.3e-05 38_[+5]_74 chr2R:12423455-12423575 1.3e-05 98_[+5]_14 chr2L:5525789-5525909 1.3e-05 101_[+5]_11 chr2L:10743895-10744015 1.3e-05 11_[+5]_101 chr2R:23402260-23402380 1.3e-05 36_[+5]_76 chr3R:13699487-13699607 1.3e-05 53_[+5]_59 chr2R:16143044-16143164 1.3e-05 95_[+5]_17 chr2L:12048883-12049003 1.3e-05 53_[+5]_59 chr2L:4818167-4818287 2.6e-05 46_[+5]_66 chr2L:2045389-2045509 2.6e-05 46_[+5]_66 chr3R:16436547-16436667 2.6e-05 30_[+5]_82 chr3R:5632200-5632320 2.6e-05 83_[+5]_29 chr3L:4003369-4003489 2.6e-05 100_[+5]_12 chr3L:2780815-2780935 2.6e-05 71_[+5]_41 chr3R:14259955-14260075 3.4e-05 35_[+5]_77 chrX:1460653-1460773 3.4e-05 [+5]_112 chr3L:20361541-20361661 3.4e-05 53_[+5]_59 chr3R:19027284-19027404 4.3e-05 85_[+5]_27 chr3R:10815168-10815288 4.3e-05 73_[+5]_39 chr2L:19530273-19530393 4.3e-05 14_[+5]_98 chr2L:6100214-6100334 5.1e-05 89_[+5]_23 chr2R:7447428-7447548 5.1e-05 96_[+5]_16 chr3L:3050279-3050399 8e-05 50_[+5]_62 chr3L:3252122-3252242 8e-05 59_[+5]_53 chrX:9502409-9502529 8e-05 34_[+5]_78 chr2R:19670542-19670662 8e-05 64_[+5]_48 chr2L:10206901-10207021 0.00011 110_[+5]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCTGTT width=8 seqs=31 chr2L:11120274-11120394 ( 32) CAGCTGTT 1 chrX:10220010-10220130 ( 86) CAGCTGTT 1 chr2R:16142102-16142222 ( 84) CAGCTGTT 1 chr3L:2782148-2782268 ( 74) CAGCTGTT 1 chr3R:20831102-20831222 ( 39) CAGCTGTT 1 chr2R:12423455-12423575 ( 99) CAGCTGTT 1 chr2L:5525789-5525909 ( 102) CAGCTGTT 1 chr2L:10743895-10744015 ( 12) CAGCTGTT 1 chr2R:23402260-23402380 ( 37) CAGCTGTT 1 chr3R:13699487-13699607 ( 54) CAGCTGTT 1 chr2R:16143044-16143164 ( 96) CAGCTGTT 1 chr2L:12048883-12049003 ( 54) CAGCTGTT 1 chr2L:4818167-4818287 ( 47) CAGCTGAT 1 chr2L:2045389-2045509 ( 47) CAGCTGAT 1 chr3R:16436547-16436667 ( 31) CAGCTGAT 1 chr3R:5632200-5632320 ( 84) CAGCTGAT 1 chr3L:4003369-4003489 ( 101) CAGCTGAT 1 chr3L:2780815-2780935 ( 72) CAGCTGAT 1 chr3R:14259955-14260075 ( 36) CAGCTGTG 1 chrX:1460653-1460773 ( 1) CAGCTGTG 1 chr3L:20361541-20361661 ( 54) CAGCTGTG 1 chr3R:19027284-19027404 ( 86) CAGCTGTC 1 chr3R:10815168-10815288 ( 74) CAGCTGTC 1 chr2L:19530273-19530393 ( 15) CAGCTGTC 1 chr2L:6100214-6100334 ( 90) CAGCTGGT 1 chr2R:7447428-7447548 ( 97) CAGCTGGT 1 chr3L:3050279-3050399 ( 51) CAGCTTTT 1 chr3L:3252122-3252242 ( 60) CAGCTTTT 1 chrX:9502409-9502529 ( 35) CAGCTTTT 1 chr2R:19670542-19670662 ( 65) CAGCTGCT 1 chr2L:10206901-10207021 ( 111) GAGCTGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5371 E= 5.1e-008 -1160 224 -259 -1160 173 -1160 -1160 -1160 -1160 -1160 236 -1160 -1160 229 -1160 -1160 -1160 -1160 -1160 174 -1160 -1160 222 -163 -64 -266 -159 124 -1160 -108 -101 143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 31 E= 5.1e-008 0.000000 0.967742 0.032258 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.903226 0.096774 0.193548 0.032258 0.064516 0.709677 0.000000 0.096774 0.096774 0.806452 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-5 regular expression -------------------------------------------------------------------------------- CAGCTGTT -------------------------------------------------------------------------------- Time 30.83 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:885128-885248 1.57e-03 46_[+2(5.45e-05)]_38_[+1(8.84e-05)]_\ 20 chr2R:7931023-7931143 1.62e-01 120 chr2L:1166413-1166533 8.04e-04 77_[+2(8.58e-05)]_35 chr2L:7013258-7013378 1.33e-01 120 chr3R:7973165-7973285 3.38e-01 120 chr2L:122405-122525 1.47e-02 120 chr3R:25023150-25023270 4.38e-02 120 chr3R:22492923-22493043 1.93e-02 120 chrX:18018543-18018663 2.19e-02 67_[+4(3.29e-05)]_45 chrX:8265391-8265511 5.87e-03 53_[+2(7.31e-05)]_25_[+2(7.31e-05)]_\ 26 chr3R:29816424-29816544 1.55e-02 120 chr3R:27228524-27228644 1.52e-04 37_[+2(5.45e-05)]_64_[+1(8.84e-05)]_\ 3 chr3L:2780815-2780935 3.33e-02 71_[+5(2.58e-05)]_41 chr3R:16180648-16180768 5.46e-03 65_[+2(8.58e-05)]_20_[+4(2.00e-05)]_\ 19 chr3L:4003369-4003489 4.70e-03 100_[+5(2.58e-05)]_12 chr2R:24313241-24313361 3.74e-01 97_[+1(8.84e-05)]_15 chr2L:19518666-19518786 2.60e-03 15_[+1(8.84e-05)]_23_[+3(2.93e-05)]_\ 66 chr3L:5133767-5133887 2.00e-03 120 chr3L:8160185-8160305 1.65e-02 120 chr2R:9822932-9823052 1.14e-03 85_[+3(5.85e-05)]_8_[+4(4.58e-05)]_\ 11 chr2R:23878342-23878462 9.35e-03 120 chr3L:21773984-21774104 1.64e-01 120 chr3R:24357902-24358022 1.44e-01 120 chr3L:8652010-8652130 5.09e-01 120 chr2R:19670542-19670662 2.14e-05 3_[+4(4.58e-05)]_36_[+2(5.68e-06)]_\ 9_[+5(7.98e-05)]_48 chr2R:6668027-6668147 3.85e-02 48_[+1(8.84e-05)]_64 chr3R:25235496-25235616 1.20e-01 120 chr3R:27273270-27273390 3.31e-03 11_[+2(5.45e-05)]_101 chrX:19276877-19276997 2.54e-02 120 chr3R:27651839-27651959 3.63e-02 120 chrX:644087-644207 5.85e-02 120 chrX:19326861-19326981 2.55e-02 120 chr3R:12704994-12705114 1.71e-02 120 chr2L:12048883-12049003 1.54e-02 53_[+5(1.29e-05)]_59 chr2R:24661366-24661486 6.05e-03 112_[+4(7.41e-05)] chr2L:14288030-14288150 5.70e-01 120 chr3R:5632200-5632320 6.25e-06 83_[+5(2.58e-05)]_16_[+2(8.58e-05)]_\ 5 chr3R:7644420-7644540 4.58e-01 120 chrX:11129043-11129163 2.83e-06 40_[+2(5.45e-05)]_21_[+3(2.93e-05)]_\ 29_[+4(2.00e-05)]_6 chr2L:10476995-10477115 5.05e-03 94_[+3(2.93e-05)]_18 chr2R:14526143-14526263 3.03e-01 120 chr3R:15268578-15268698 6.26e-02 120 chr3L:5777268-5777388 1.12e-01 120 chrX:7066744-7066864 1.59e-03 75_[+2(1.11e-05)]_37 chr3R:18230381-18230501 1.59e-02 120 chr3R:15249850-15249970 3.79e-01 120 chr2R:16143044-16143164 8.18e-06 25_[+4(2.00e-05)]_25_[+2(5.45e-05)]_\ 29_[+5(1.29e-05)]_17 chr2L:15118150-15118270 2.40e-01 120 chr2R:23877622-23877742 4.80e-04 34_[+4(4.58e-05)]_56_[+2(1.94e-05)]_\ 14 chr2R:14770775-14770895 3.86e-01 120 chr2L:13827711-13827831 5.75e-02 120 chrX:9085840-9085960 7.67e-03 120 chrX:7986678-7986798 5.20e-03 63_[+2(2.82e-05)]_49 chr3L:4136013-4136133 6.01e-03 79_[+3(5.85e-05)]_33 chr3L:7916374-7916494 7.52e-02 89_[+1(8.84e-05)]_23 chr3L:3515412-3515532 1.22e-01 120 chr2R:12182559-12182679 1.41e-01 120 chr2L:2969636-2969756 2.76e-03 100_[+4(7.41e-05)]_12 chr2R:17748030-17748150 2.79e-05 41_[+1(4.54e-05)]_6_[+2(5.68e-06)]_\ 35_[+4(4.58e-05)]_14 chr2L:13332889-13333009 8.78e-03 104_[+5(7.98e-05)]_8 chr3R:24717397-24717517 2.03e-02 74_[+3(2.93e-05)]_38 chr2L:10671655-10671775 1.00e-01 120 chr2L:21397445-21397565 2.93e-03 108_[+3(5.85e-05)]_4 chr3L:11630799-11630919 2.73e-01 120 chrX:927679-927799 3.67e-01 120 chr2R:16230683-16230803 1.93e-02 68_[+1(4.54e-05)]_44 chrX:14603675-14603795 7.02e-04 13_[+2(5.45e-05)]_99 chr2L:4331969-4332089 1.50e-02 120 chr2R:19283927-19284047 1.33e-03 76_[+2(5.68e-06)]_36 chr3R:23924302-23924422 9.51e-06 12_[+1(4.54e-05)]_1_[+4(7.41e-05)]_\ 36_[+3(5.85e-05)]_1_[+2(3.79e-05)]_38 chrX:7074470-7074590 2.79e-02 66_[+4(3.29e-05)]_46 chr3R:13699487-13699607 6.67e-04 53_[+5(1.29e-05)]_59 chr2L:19530273-19530393 8.16e-04 14_[+5(4.28e-05)]_57_[+4(3.29e-05)]_\ 33 chr3L:17806531-17806651 4.89e-04 6_[+1(4.54e-05)]_106 chr2R:21251983-21252103 8.83e-02 21_[+2(1.94e-05)]_91 chr2R:8665393-8665513 5.33e-01 120 chr2R:11293131-11293251 2.80e-01 120 chr3L:10225477-10225597 1.45e-01 120 chr3R:10076770-10076890 9.06e-03 54_[+2(5.45e-05)]_58 chr3L:21441393-21441513 5.66e-03 120 chrX:9502409-9502529 5.70e-03 34_[+5(7.98e-05)]_78 chr3L:11998085-11998205 7.90e-02 120 chr2R:12468092-12468212 2.27e-03 90_[+2(1.94e-05)]_22 chr2R:11289763-11289883 4.51e-02 120 chr2R:16583363-16583483 5.08e-02 57_[+4(5.41e-05)]_55 chr2L:19063167-19063287 1.43e-02 89_[+3(2.93e-05)]_23 chr3R:26137408-26137528 1.93e-01 58_[+1(8.84e-05)]_54 chr3R:8726741-8726861 4.16e-03 27_[+4(4.58e-05)]_85 chr3L:16347960-16348080 1.29e-02 120 chrX:16881033-16881153 3.36e-02 120 chr2L:2151659-2151779 2.91e-02 [+1(4.54e-05)]_112 chr2L:20223474-20223594 5.52e-01 120 chr2R:7711998-7712118 5.16e-03 70_[+3(2.93e-05)]_42 chr3R:8723106-8723226 1.51e-02 19_[+1(4.54e-05)]_93 chr2L:21220550-21220670 4.29e-02 120 chr2R:13439221-13439341 5.77e-01 120 chr2R:16149811-16149931 1.27e-02 48_[+4(3.29e-05)]_64 chr2L:5532208-5532328 1.07e-02 120 chr3L:9211425-9211545 1.18e-01 120 chr3R:24922434-24922554 8.88e-03 7_[+3(2.93e-05)]_105 chr2R:23402260-23402380 8.98e-05 36_[+5(1.29e-05)]_34_[+2(1.11e-05)]_\ 34 chr3L:15072289-15072409 3.26e-02 11_[+1(8.84e-05)]_101 chr3R:16436789-16436909 2.50e-01 120 chr2R:6647967-6648087 2.70e-03 58_[+4(4.58e-05)]_6_[+4(2.00e-05)]_\ 40 chr3L:20221046-20221166 8.77e-02 120 chr3R:27582769-27582889 7.58e-01 120 chr3L:17669664-17669784 5.16e-01 120 chr2R:10112195-10112315 1.45e-02 87_[+3(5.85e-05)]_25 chr2L:10743895-10744015 2.75e-06 11_[+5(1.29e-05)]_27_[+2(5.68e-06)]_\ 14_[+3(2.93e-05)]_44 chr2R:9863480-9863600 1.10e-01 120 chr3L:1970102-1970222 1.36e-03 120 chr3L:12193691-12193811 1.12e-02 82_[+4(2.00e-05)]_30 chr3R:10815168-10815288 6.64e-04 15_[+4(7.41e-05)]_50_[+5(4.28e-05)]_\ 39 chr3R:27928220-27928340 7.58e-04 60_[+2(5.68e-06)]_52 chr2L:16738365-16738485 2.01e-03 54_[+4(5.41e-05)]_58 chr2L:5525789-5525909 1.93e-04 78_[+3(5.85e-05)]_15_[+5(1.29e-05)]_\ 11 chr3R:20634980-20635100 1.23e-02 48_[+3(2.93e-05)]_64 chr2R:7447428-7447548 2.78e-05 3_[+4(2.00e-05)]_85_[+5(5.12e-05)]_\ 16 chr3L:2409427-2409547 3.45e-01 120 chr2R:12423455-12423575 1.88e-05 50_[+2(5.68e-06)]_28_[+5(4.28e-05)]_\ 4_[+5(1.29e-05)]_14 chr3R:16436547-16436667 4.42e-04 30_[+5(2.58e-05)]_70_[+4(3.29e-05)]_\ 4 chr2L:11100847-11100967 3.34e-02 120 chr3L:13040967-13041087 7.88e-03 120 chrX:17622883-17623003 3.68e-02 120 chr3R:22094121-22094241 1.84e-01 120 chr3L:332609-332729 1.54e-01 120 chrX:12765224-12765344 6.92e-02 120 chr3R:15340443-15340563 6.66e-01 120 chrX:16587776-16587896 4.28e-03 120 chr2R:24603549-24603669 7.92e-02 120 chr3R:7085578-7085698 1.09e-02 120 chr2R:15940008-15940128 9.76e-01 120 chr3R:30000412-30000532 4.46e-03 120 chr2R:21704051-21704171 7.03e-01 120 chr3R:17449530-17449650 9.62e-02 2_[+4(3.29e-05)]_110 chr2R:9039573-9039693 2.68e-02 120 chrX:927888-928008 1.65e-01 120 chr2R:8051928-8052048 4.94e-02 107_[+4(2.00e-05)]_5 chr2R:22293246-22293366 1.06e-01 120 chrX:15328264-15328384 3.36e-02 25_[+3(2.93e-05)]_87 chr2L:4019912-4020032 2.68e-01 120 chr3L:174671-174791 8.09e-02 18_[+3(2.93e-05)]_94 chr2L:472959-473079 4.72e-01 120 chr2L:9540101-9540221 3.07e-01 11_[+1(8.84e-05)]_101 chr2L:4442330-4442450 5.93e-02 120 chr2L:3145681-3145801 8.39e-04 74_[+3(2.93e-05)]_38 chr3R:29138795-29138915 6.20e-03 112_[+4(2.00e-05)] chr3R:22618404-22618524 6.38e-04 78_[+5(5.12e-05)]_34 chr2L:3648233-3648353 2.40e-02 120 chr3L:3252122-3252242 1.75e-03 59_[+5(7.98e-05)]_53 chr3R:13471497-13471617 1.02e-01 120 chrX:1523438-1523558 3.46e-03 120 chr3L:3937973-3938093 7.91e-03 37_[+3(2.93e-05)]_17_[+3(2.93e-05)]_\ 50 chr2L:6100214-6100334 6.60e-02 89_[+5(5.12e-05)]_23 chr3L:20361541-20361661 3.03e-04 53_[+5(3.41e-05)]_8_[+3(2.93e-05)]_\ 43 chrX:20393722-20393842 6.10e-03 120 chr3L:9047349-9047469 2.36e-01 120 chr2L:9253054-9253174 1.45e-01 120 chr3R:13271989-13272109 3.71e-02 120 chr2L:20294065-20294185 7.24e-01 120 chr2L:6127613-6127733 2.37e-03 64_[+2(8.58e-05)]_48 chr3R:26966811-26966931 6.92e-03 19_[+1(8.84e-05)]_49_[+2(3.42e-05)]_\ 36 chr2L:4382687-4382807 8.06e-04 84_[+3(2.93e-05)]_28 chrX:16073757-16073877 5.34e-01 120 chr3R:19027284-19027404 2.89e-03 51_[+5(9.70e-05)]_26_[+5(4.28e-05)]_\ 27 chr3R:23159460-23159580 2.57e-04 65_[+2(5.45e-05)]_31_[+1(8.84e-05)]_\ 8 chr3R:29138591-29138711 9.84e-04 35_[+2(5.45e-05)]_24_[+4(2.00e-05)]_\ 45 chr2R:19502960-19503080 3.61e-03 1_[+1(8.84e-05)]_61_[+2(5.45e-05)]_\ 42 chr2R:20287055-20287175 1.33e-01 120 chrX:5613201-5613321 7.73e-01 120 chrX:17532343-17532463 5.98e-02 20_[+4(4.58e-05)]_92 chr3R:5550580-5550700 1.46e-01 120 chrX:12967427-12967547 3.01e-01 120 chr3L:5927674-5927794 8.53e-04 79_[+5(1.29e-05)]_33 chrX:932947-933067 2.81e-03 22_[+4(4.58e-05)]_90 chr3L:12203968-12204088 9.57e-04 120 chr3R:20831102-20831222 1.00e-02 38_[+5(1.29e-05)]_74 chr2R:18173084-18173204 4.57e-01 120 chr2L:8043286-8043406 3.64e-02 120 chr2R:20287286-20287406 5.81e-01 120 chrX:8177136-8177256 8.79e-03 94_[+1(4.54e-05)]_18 chr2L:13021542-13021662 4.91e-02 120 chr2L:7473366-7473486 4.84e-02 66_[+1(4.54e-05)]_46 chr3R:12219702-12219822 3.13e-02 88_[+4(4.58e-05)]_24 chr2R:24138514-24138634 3.96e-01 120 chr2R:23357372-23357492 1.47e-02 120 chr2L:10206901-10207021 1.49e-02 120 chrX:9192553-9192673 1.07e-01 120 chrX:6261027-6261147 1.02e-02 70_[+3(2.93e-05)]_42 chr2L:15771124-15771244 1.82e-03 62_[+3(2.93e-05)]_50 chr2L:2045389-2045509 3.90e-06 2_[+4(7.41e-05)]_36_[+5(2.58e-05)]_\ 30_[+2(1.11e-05)]_28 chr3L:9629975-9630095 6.20e-02 120 chrX:12496670-12496790 8.00e-03 120 chr2R:23396688-23396808 8.02e-04 52_[+2(5.68e-06)]_60 chrX:6683731-6683851 7.96e-03 69_[+3(5.85e-05)]_43 chr3L:2782148-2782268 3.15e-04 73_[+5(1.29e-05)]_39 chr3L:1318334-1318454 1.30e-04 83_[+2(1.94e-05)]_12_[+5(8.82e-05)]_\ 9 chr3L:7640456-7640576 6.48e-03 87_[+2(2.82e-05)]_25 chr2R:14758057-14758177 1.66e-01 120 chrX:12592242-12592362 3.01e-01 120 chrX:13154915-13155035 3.07e-04 23_[+4(3.29e-05)]_55_[+3(2.93e-05)]_\ 26 chr2R:8627826-8627946 2.12e-01 120 chr3R:7131076-7131196 4.66e-02 23_[+3(2.93e-05)]_89 chr2R:16142102-16142222 3.20e-05 69_[+3(5.85e-05)]_6_[+5(1.29e-05)]_\ 29 chr3R:24719582-24719702 2.11e-02 38_[+3(2.93e-05)]_74 chr3L:16842076-16842196 2.29e-01 120 chr3R:21069842-21069962 3.12e-01 120 chrX:13811554-13811674 1.87e-02 120 chr2L:16902149-16902269 4.57e-03 77_[+4(3.29e-05)]_35 chr3L:20393535-20393655 2.92e-03 17_[+3(5.85e-05)]_95 chrX:1460653-1460773 2.52e-03 [+5(3.41e-05)]_112 chrX:2727592-2727712 1.09e-02 12_[+4(3.29e-05)]_100 chr2L:7856523-7856643 6.75e-02 80_[+2(5.45e-05)]_32 chr3L:4532221-4532341 4.22e-03 120 chr3L:995853-995973 3.13e-01 120 chr3R:8806201-8806321 8.97e-04 61_[+2(5.45e-05)]_51 chr3R:12723957-12724077 2.57e-02 108_[+4(3.29e-05)]_4 chr3L:4092848-4092968 5.29e-04 48_[+4(7.41e-05)]_54_[+1(4.54e-05)]_\ 2 chr2R:17739392-17739512 1.16e-01 120 chr3L:21529311-21529431 3.46e-02 43_[+4(2.00e-05)]_69 chr2R:23752647-23752767 7.18e-02 120 chr3L:3050279-3050399 3.22e-02 50_[+5(7.98e-05)]_62 chr2R:9400267-9400387 2.12e-01 120 chrX:10220010-10220130 7.14e-04 36_[+3(5.85e-05)]_41_[+5(1.29e-05)]_\ 27 chr3R:14259955-14260075 2.91e-02 35_[+5(3.41e-05)]_77 chrX:8407491-8407611 9.48e-01 120 chr2L:6663809-6663929 8.08e-02 32_[+1(8.84e-05)]_80 chr2L:4387058-4387178 3.23e-05 62_[+2(5.68e-06)]_14_[+4(3.29e-05)]_\ 28 chr2L:14351595-14351715 5.37e-02 120 chr3L:12537250-12537370 2.30e-01 120 chr3R:9763679-9763799 3.32e-01 120 chr2L:4818167-4818287 1.49e-02 46_[+5(2.58e-05)]_66 chrX:1664959-1665079 1.43e-03 79_[+3(2.93e-05)]_33 chr2R:7709494-7709614 8.74e-03 120 chr3L:16139263-16139383 7.94e-03 69_[+3(2.93e-05)]_43 chrX:2624708-2624828 4.32e-02 120 chr3L:11998288-11998408 1.83e-01 120 chr3R:14901540-14901660 6.41e-03 120 chr3L:21554964-21555084 2.47e-01 120 chrX:13738024-13738144 2.79e-02 120 chr2L:1704835-1704955 1.49e-01 120 chr2L:18714244-18714364 8.47e-01 120 chr2R:9843695-9843815 8.58e-04 27_[+1(8.84e-05)]_35_[+2(2.82e-05)]_\ 42 chrX:15482266-15482386 2.25e-05 55_[+3(2.93e-05)]_57 chr2L:9460123-9460243 1.80e-04 52_[+2(2.82e-05)]_8_[+2(1.94e-05)]_\ 44 chr2R:10885138-10885258 1.02e-01 120 chr2L:11120274-11120394 6.61e-06 31_[+5(1.29e-05)]_10_[+3(2.93e-05)]_\ 63 chrX:19762337-19762457 9.03e-03 105_[+1(8.84e-05)]_7 chrX:2172416-2172536 3.12e-04 4_[+4(5.41e-05)]_26_[+3(2.93e-05)]_\ 51_[+3(5.85e-05)]_15 chr3R:27283715-27283835 1.14e-01 34_[+3(5.85e-05)]_78 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n06.farnam.hpc.yale.internal ********************************************************************************