******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/Hey.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2R:7998688-7998808 1.0000 120 chr3L:6108403-6108523 1.0000 120 chr3R:27616632-27616752 1.0000 120 chr2L:5988264-5988384 1.0000 120 chr2L:10496500-10496620 1.0000 120 chr2L:8804267-8804387 1.0000 120 chr2L:19010176-19010296 1.0000 120 chr2R:5741967-5742087 1.0000 120 chr3R:18721527-18721647 1.0000 120 chr3L:12313419-12313539 1.0000 120 chr2L:20225972-20226092 1.0000 120 chr2L:1447791-1447911 1.0000 120 chr3L:795140-795260 1.0000 120 chrX:17407876-17407996 1.0000 120 chr3L:6855240-6855360 1.0000 120 chrX:8723532-8723652 1.0000 120 chr3L:12363851-12363971 1.0000 120 chr2L:15372078-15372198 1.0000 120 chr3R:17588944-17589064 1.0000 120 chr2R:11346195-11346315 1.0000 120 chr2L:17452223-17452343 1.0000 120 chrX:4265466-4265586 1.0000 120 chr3L:22113325-22113445 1.0000 120 chr3L:4081382-4081502 1.0000 120 chr3L:14101855-14101975 1.0000 120 chr2L:19901004-19901124 1.0000 120 chr2L:2402742-2402862 1.0000 120 chr3L:6940573-6940693 1.0000 120 chr4:1103959-1104079 1.0000 120 chr2L:9665441-9665561 1.0000 120 chr2L:19223315-19223435 1.0000 120 chr3R:5574005-5574125 1.0000 120 chr2R:14533162-14533282 1.0000 120 chr3R:22935869-22935989 1.0000 120 chr3R:15598177-15598297 1.0000 120 chrX:3870130-3870250 1.0000 120 chr2L:11431041-11431161 1.0000 120 chrX:865350-865470 1.0000 120 chr3R:21545447-21545567 1.0000 120 chr3R:28847692-28847812 1.0000 120 chr3L:22118409-22118529 1.0000 120 chr3R:10540354-10540474 1.0000 120 chr2R:15720311-15720431 1.0000 120 chr3R:25796002-25796122 1.0000 120 chr3L:4082024-4082144 1.0000 120 chr2L:19227902-19228022 1.0000 120 chr2R:13081453-13081573 1.0000 120 chr3L:13194676-13194796 1.0000 120 chrX:5541520-5541640 1.0000 120 chr3R:15513999-15514119 1.0000 120 chr2R:18391657-18391777 1.0000 120 chr2R:23584990-23585110 1.0000 120 chr3L:22396986-22397106 1.0000 120 chrX:21001077-21001197 1.0000 120 chr3L:16516906-16517026 1.0000 120 chr3L:22349646-22349766 1.0000 120 chr3L:5179013-5179133 1.0000 120 chr3L:13196724-13196844 1.0000 120 chr3R:29378888-29379008 1.0000 120 chr2R:12704139-12704259 1.0000 120 chrX:1255858-1255978 1.0000 120 chr3R:31296193-31296313 1.0000 120 chr3L:17987364-17987484 1.0000 120 chr3L:18419016-18419136 1.0000 120 chr2R:15843724-15843844 1.0000 120 chr2R:7996545-7996665 1.0000 120 chr2R:6587167-6587287 1.0000 120 chr3L:21211745-21211865 1.0000 120 chr3L:22248213-22248333 1.0000 120 chrX:20726584-20726704 1.0000 120 chr3L:12639414-12639534 1.0000 120 chr3L:12314140-12314260 1.0000 120 chr3L:5986680-5986800 1.0000 120 chr2R:22283029-22283149 1.0000 120 chr2R:19803238-19803358 1.0000 120 chr3R:10419613-10419733 1.0000 120 chrX:4388021-4388141 1.0000 120 chrX:18532764-18532884 1.0000 120 chr3R:7137036-7137156 1.0000 120 chrX:4215520-4215640 1.0000 120 chr3L:11738886-11739006 1.0000 120 chr3R:6464461-6464581 1.0000 120 chr3L:6036680-6036800 1.0000 120 chr2R:20413429-20413549 1.0000 120 chr3R:20987648-20987768 1.0000 120 chr3L:18325478-18325598 1.0000 120 chr3L:8219104-8219224 1.0000 120 chr3L:21873375-21873495 1.0000 120 chr3R:10371185-10371305 1.0000 120 chr2L:6828899-6829019 1.0000 120 chr2R:20929066-20929186 1.0000 120 chr3R:21517414-21517534 1.0000 120 chr3R:22191460-22191580 1.0000 120 chr3R:17707801-17707921 1.0000 120 chr2L:499332-499452 1.0000 120 chr3R:4913784-4913904 1.0000 120 chrX:14955623-14955743 1.0000 120 chr3L:6106039-6106159 1.0000 120 chr2R:8000441-8000561 1.0000 120 chr3L:6099365-6099485 1.0000 120 chr2L:1120341-1120461 1.0000 120 chrX:598797-598917 1.0000 120 chr3L:5988137-5988257 1.0000 120 chr3L:8543629-8543749 1.0000 120 chrX:10533986-10534106 1.0000 120 chrX:20279236-20279356 1.0000 120 chrX:21484118-21484238 1.0000 120 chrX:17413686-17413806 1.0000 120 chr3R:30904130-30904250 1.0000 120 chr3L:12729756-12729876 1.0000 120 chr3L:21590121-21590241 1.0000 120 chr2R:12699209-12699329 1.0000 120 chr3R:22261586-22261706 1.0000 120 chr3L:810384-810504 1.0000 120 chr2L:5082723-5082843 1.0000 120 chr3L:3566890-3567010 1.0000 120 chr3L:14570277-14570397 1.0000 120 chr3L:11869144-11869264 1.0000 120 chrX:602108-602228 1.0000 120 chr2R:14017702-14017822 1.0000 120 chr2L:4132414-4132534 1.0000 120 chr2L:12868144-12868264 1.0000 120 chrX:8769296-8769416 1.0000 120 chr3L:6881529-6881649 1.0000 120 chr2L:8788413-8788533 1.0000 120 chr2R:15066497-15066617 1.0000 120 chr3R:16564914-16565034 1.0000 120 chr3L:1005998-1006118 1.0000 120 chr3L:905534-905654 1.0000 120 chr2L:21876166-21876286 1.0000 120 chr2L:15371376-15371496 1.0000 120 chr3R:22880143-22880263 1.0000 120 chr3L:14589470-14589590 1.0000 120 chr3R:4886552-4886672 1.0000 120 chr3R:5506306-5506426 1.0000 120 chr3R:28593834-28593954 1.0000 120 chr2L:10569671-10569791 1.0000 120 chrX:2684065-2684185 1.0000 120 chrX:15364092-15364212 1.0000 120 chr2R:20893199-20893319 1.0000 120 chrX:14296702-14296822 1.0000 120 chr3R:10700763-10700883 1.0000 120 chr2L:19104522-19104642 1.0000 120 chr3L:15662661-15662781 1.0000 120 chrX:9709759-9709879 1.0000 120 chr3R:5571898-5572018 1.0000 120 chr2L:7569578-7569698 1.0000 120 chr2R:18854494-18854614 1.0000 120 chr3R:19684248-19684368 1.0000 120 chr2L:19091126-19091246 1.0000 120 chr3L:808864-808984 1.0000 120 chrX:1897871-1897991 1.0000 120 chr2L:11295894-11296014 1.0000 120 chr2L:8743240-8743360 1.0000 120 chr2L:13706804-13706924 1.0000 120 chr2R:5819846-5819966 1.0000 120 chrX:19446530-19446650 1.0000 120 chr3R:5099137-5099257 1.0000 120 chrX:8628776-8628896 1.0000 120 chr2L:19021424-19021544 1.0000 120 chr2L:13051300-13051420 1.0000 120 chr3L:13645435-13645555 1.0000 120 chr3R:9133362-9133482 1.0000 120 chr3R:18203411-18203531 1.0000 120 chr2L:1308063-1308183 1.0000 120 chr2L:2397021-2397141 1.0000 120 chr3L:18447197-18447317 1.0000 120 chr3R:19069403-19069523 1.0000 120 chr3L:14569673-14569793 1.0000 120 chr3R:23828911-23829031 1.0000 120 chr3L:22312594-22312714 1.0000 120 chr3R:28576966-28577086 1.0000 120 chr3R:8227057-8227177 1.0000 120 chr2R:19785436-19785556 1.0000 120 chr3L:18411450-18411570 1.0000 120 chrX:10263274-10263394 1.0000 120 chr2R:23830809-23830929 1.0000 120 chr3L:1212744-1212864 1.0000 120 chrX:12344826-12344946 1.0000 120 chr3R:19985449-19985569 1.0000 120 chr2L:19807139-19807259 1.0000 120 chr3R:27440034-27440154 1.0000 120 chr2L:6234297-6234417 1.0000 120 chr2R:16055046-16055166 1.0000 120 chr3R:30600112-30600232 1.0000 120 chr2R:15051513-15051633 1.0000 120 chr3L:1931455-1931575 1.0000 120 chr2R:22524689-22524809 1.0000 120 chr3R:31014574-31014694 1.0000 120 chrX:13815072-13815192 1.0000 120 chrX:20730707-20730827 1.0000 120 chr3L:13155408-13155528 1.0000 120 chr2R:22863097-22863217 1.0000 120 chr2L:1788098-1788218 1.0000 120 chrX:17786504-17786624 1.0000 120 chr3L:22527409-22527529 1.0000 120 chr2R:16395960-16396080 1.0000 120 chr3L:6019218-6019338 1.0000 120 chr2L:5927509-5927629 1.0000 120 chr2L:18978868-18978988 1.0000 120 chr2L:10550466-10550586 1.0000 120 chr2L:19802050-19802170 1.0000 120 chrX:15363484-15363604 1.0000 120 chr3R:26935538-26935658 1.0000 120 chr3R:26123455-26123575 1.0000 120 chr2L:9443230-9443350 1.0000 120 chr2L:6630339-6630459 1.0000 120 chrX:8634705-8634825 1.0000 120 chrX:1423523-1423643 1.0000 120 chr2L:3307519-3307639 1.0000 120 chr2R:5820527-5820647 1.0000 120 chr2R:12699420-12699540 1.0000 120 chr3L:11361635-11361755 1.0000 120 chr2R:22374420-22374540 1.0000 120 chr3R:15532168-15532288 1.0000 120 chr2R:21032862-21032982 1.0000 120 chr2R:12907992-12908112 1.0000 120 chr3L:7474907-7475027 1.0000 120 chr3L:22526003-22526123 1.0000 120 chr3L:2846736-2846856 1.0000 120 chr2R:15336994-15337114 1.0000 120 chrX:12266125-12266245 1.0000 120 chr2L:6319155-6319275 1.0000 120 chr3R:15072328-15072448 1.0000 120 chr3R:4855990-4856110 1.0000 120 chrX:1814813-1814933 1.0000 120 chr2L:6316966-6317086 1.0000 120 chr3L:8948188-8948308 1.0000 120 chr3L:12648580-12648700 1.0000 120 chr2R:19421997-19422117 1.0000 120 chr3L:15720297-15720417 1.0000 120 chr2R:18376164-18376284 1.0000 120 chr2L:19221658-19221778 1.0000 120 chr2L:6207794-6207914 1.0000 120 chr2L:19087469-19087589 1.0000 120 chr3L:2191633-2191753 1.0000 120 chr3R:27007166-27007286 1.0000 120 chr2R:16369235-16369355 1.0000 120 chr2R:8015201-8015321 1.0000 120 chr2L:14889819-14889939 1.0000 120 chr2L:2639584-2639704 1.0000 120 chr3L:18448128-18448248 1.0000 120 chr3R:23826018-23826138 1.0000 120 chr2L:15454167-15454287 1.0000 120 chr3R:29707415-29707535 1.0000 120 chr2R:21788658-21788778 1.0000 120 chrX:4194655-4194775 1.0000 120 chr2L:3278933-3279053 1.0000 120 chr2L:19773542-19773662 1.0000 120 chr3R:15411290-15411410 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_Hey/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/Hey.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.248 C 0.259 G 0.255 T 0.238 Background letter frequencies (from file dataset with add-one prior applied): A 0.248 C 0.259 G 0.255 T 0.238 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GRCACGTG MEME-1 width = 8 sites = 192 llr = 1476 E-value = 1.5e-166 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 14:9:1:: pos.-specific C 12a:a:1: probability G 73:1:9:a matrix T 11::::9: bits 2.1 1.9 * * * 1.7 * * * 1.5 ****** Relative 1.2 ****** Entropy 1.0 ****** (11.1 bits) 0.8 ****** 0.6 * ****** 0.4 * ****** 0.2 * ****** 0.0 -------- Multilevel GACACGTG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:15454167-15454287 72 1.63e-05 CCCAGACTGC GACACGTG TTCCGGGAAT chr3L:12648580-12648700 86 1.63e-05 TGTAATCCCC GACACGTG GAGTAAATTA chr3R:4855990-4856110 60 1.63e-05 ACACTGTGTT GACACGTG TCAAAACTTC chr3R:26935538-26935658 65 1.63e-05 CCCCTGCAGC GACACGTG CCACTGAACG chr2L:19802050-19802170 41 1.63e-05 CAAAAGGCAG GACACGTG TTGGGACTCC chrX:17786504-17786624 66 1.63e-05 ATGGCGATGC GACACGTG TGCGACAAGC chrX:12344826-12344946 27 1.63e-05 TCCAACTGTT GACACGTG CCGCATCGTG chr3L:18411450-18411570 42 1.63e-05 CTGACTGACT GACACGTG CCCGCCGTCG chr3L:18447197-18447317 53 1.63e-05 CATTAAAAGG GACACGTG CAGTGAGGCA chr3R:19684248-19684368 92 1.63e-05 TCATAATCGG GACACGTG CTGGCTTCGT chr2R:20893199-20893319 29 1.63e-05 CACCAACACA GACACGTG CTGTGCCGCC chr2L:10569671-10569791 53 1.63e-05 AAATCGCTGC GACACGTG TCGTTGTACT chr3L:14589470-14589590 60 1.63e-05 CATCGACCAT GACACGTG CGTTTCCCTG chr3L:3566890-3567010 63 1.63e-05 TCAAAGTGCA GACACGTG CCACGCCGGA chr3R:30904130-30904250 55 1.63e-05 TTCCAGCAAG GACACGTG CCGGTCGGCG chrX:10533986-10534106 42 1.63e-05 CAGTACGCTC GACACGTG CGCGACGTGT chr3L:18325478-18325598 79 1.63e-05 ACCAGCGGCT GACACGTG ACCACTGTCC chr3L:6036680-6036800 63 1.63e-05 AAACGATGCG GACACGTG CCGCATCCAA chr3R:6464461-6464581 6 1.63e-05 AAATT GACACGTG CCAGCCTTCG chr3R:7137036-7137156 22 1.63e-05 CAAACCTTGT GACACGTG CTGGTCACGC chr2R:12704139-12704259 80 1.63e-05 AAGGCTGCCA GACACGTG CTCACGACCC chr3L:16516906-16517026 62 1.63e-05 CAGGCCCTTG GACACGTG CCACTCTTAG chr3L:22396986-22397106 47 1.63e-05 acgggaacgg gacacgTG TCGGTGGCGA chr2R:18391657-18391777 55 1.63e-05 ACGGCCAACC GACACGTG CGCACGTTAA chr3L:13194676-13194796 86 1.63e-05 TCCTGTGAAC GACACGTG ACCAACTGAG chr2L:19227902-19228022 61 1.63e-05 CACCATAGAC GACACGTG CGGCATTTCG chr2L:11431041-11431161 64 1.63e-05 ACGAGCCACT GACACGTG ACCAGGGATC chr2L:9665441-9665561 68 1.63e-05 CCTAATCCTT GACACGTG TTGGCCAACA chrX:4265466-4265586 12 1.63e-05 AATTCCGAGC GACACGTG CCAGACACAA chr2L:15372078-15372198 3 1.63e-05 AA GACACGTG CCGTCGTCAT chrX:8723532-8723652 53 1.63e-05 CAACTGGCGG GACACGTG CGGTCACGTG chrX:17407876-17407996 13 1.63e-05 CATTATCCTG GACACGTG TGCGCACAAA chr2L:20225972-20226092 36 1.63e-05 GTGAATGTGA GACACGTG CGGGGACGCC chr2L:8804267-8804387 39 1.63e-05 AGCGTGGCAG GACACGTG CCGCTAACTT chr3R:27616632-27616752 91 1.63e-05 TGTTAAGTTG GACACGTG TCGAGGTTTG chr3R:29707415-29707535 99 3.30e-05 CTTTATTCGT GGCACGTG CTCATCTTTC chr2L:14889819-14889939 70 3.30e-05 ACAAAATACT GGCACGTG CCGAACGTCT chr2R:16369235-16369355 71 3.30e-05 CAAAATACTT GGCACGTG CTGGGGGATG chr3R:15072328-15072448 58 3.30e-05 TGGCTTCGTC GGCACGTG CTGTTGTTGC chr2R:15336994-15337114 53 3.30e-05 GGGCGTGAGC GGCACGTG ACCACAAAAC chr3L:11361635-11361755 89 3.30e-05 TTTCTGGGCT GGCACGTG ATTGGAATTA chr3L:1931455-1931575 59 3.30e-05 CCCAAAATCA GGCACGTG CCACTGGGAG chr2R:23830809-23830929 60 3.30e-05 GTCCATCGGC GGCACGTG GCTCGGTTGG chr2R:19785436-19785556 56 3.30e-05 CCGGACTCCA GGCACGTG CTGCCAAACC chr2L:1308063-1308183 69 3.30e-05 CGAAGACCGC GGCACGTG CTGCCCAATA chr3R:5099137-5099257 61 3.30e-05 GGTGGCAAAT GGCACGTG CCATAAATTC chrX:2684065-2684185 31 3.30e-05 GTGACTTTGT GGCACGTG TGTGGCCGCG chr2R:12699209-12699329 12 3.30e-05 CCCTGCGAGT GGCACGTG CCGCATGGAT chr3L:8219104-8219224 86 3.30e-05 ACGCACACTC GGCACGTG CCGGGCCTAA chr3L:11738886-11739006 60 3.30e-05 CCCACCGCTT GGCACGTG TATGCGTCAC chrX:4215520-4215640 71 3.30e-05 AAATGACACT GGCACGTG GCGCGACGTA chr3L:21211745-21211865 51 3.30e-05 GCAGCTACTT GGCACGTG CCTTGGTTTA chr3L:17987364-17987484 65 3.30e-05 TGAAAAACGT GGCACGTG GCACCAAAGT chr3R:29378888-29379008 61 3.30e-05 TGGAATTTGC GGCACGTG CCCAAATTGC chr3L:22118409-22118529 49 3.30e-05 GAAGAGCTGT GGCACGTG TCATAAAATA chrX:865350-865470 63 3.30e-05 GGGCGTGCAG GGCACGTG ACCAATCAAA chr2R:14533162-14533282 66 3.30e-05 CTTTATTGAC GGCACGTG CCGAAACGGC chr3R:5574005-5574125 50 3.30e-05 CTTAATGCGC GGCACGTG TCTCGAGCCT chr2L:17452223-17452343 99 3.30e-05 AACTTCCTGT GGCACGTG TCCTTGACAG chr3L:12363851-12363971 67 3.30e-05 TAACGGCAAT GGCACGTG TTGTTGTGCG chr3L:795140-795260 18 3.30e-05 ATATCTCTCA GGCACGTG TCCGTCTTTT chr2R:8015201-8015321 50 5.00e-05 CTGCCACATG GCCACGTG CCCGCAAGAC chr3L:7474907-7475027 40 5.00e-05 GCCATTGGCT GCCACGTG CAATGTCAAT chr3R:15532168-15532288 104 5.00e-05 TCCCATCGTG GCCACGTG CCATGTCCC chr2L:1788098-1788218 42 5.00e-05 TCCGGGGAAT GCCACGTG GCCCAAACAA chr2L:13051300-13051420 17 5.00e-05 TCTGGCGATT GCCACGTG GCCATATACA chrX:19446530-19446650 42 5.00e-05 catgccacat gccacgtg ccgcatgcca chrX:1897871-1897991 96 5.00e-05 GGGTTGGAGT GCCACGTG CAAGTACACG chr3L:15662661-15662781 23 5.00e-05 CGTTGCACGT GCCACGTG CCAAAACAAC chrX:14296702-14296822 73 5.00e-05 TCGCCACGTG GCCACGTG TTTACATGCG chr3R:16564914-16565034 58 5.00e-05 CTCGGGCGGT GCCACGTG GCATAAATTA chr2R:14017702-14017822 40 5.00e-05 CAAATACACG GCCACGTG TGTGCGTGAA chr3L:810384-810504 3 5.00e-05 CG GCCACGTG GCCACCTTCC chrX:17413686-17413806 68 5.00e-05 CCGCGTTTTG GCCACGTG TCCTGGCCGG chr2R:20929066-20929186 74 5.00e-05 TTGGAGTTCC GCCACGTG CGGGGGATTT chrX:18532764-18532884 11 5.00e-05 TCTCACGTGT GCCACGTG CTTTTTTTGT chr3R:31296193-31296313 67 5.00e-05 cgtgccacat gccacgtg ctgcatgctc chr2R:15720311-15720431 78 5.00e-05 ATGGAAATTC GCCACGTG CGAAGGGGCG chr3R:28847692-28847812 62 5.00e-05 ATCTGGGAGC GCCACGTG CTGGCCAACT chr3L:22113325-22113445 12 5.00e-05 GGTGGGGCGG GCCACGTG GCCGAGCAGC chr3L:6108403-6108523 92 5.00e-05 GTCATTAATG GCCACGTG CCTGACTTCT chr3L:18448128-18448248 91 6.57e-05 CATTCGTGCG GTCACGTG ACTTCATCCT chr2L:6630339-6630459 44 6.57e-05 AATATTTTCG GTCACGTG CCGCCTCATC chr2L:10550466-10550586 54 6.57e-05 GCATTATGGA GTCACGTG TCCAGCTCCA chr3R:27440034-27440154 51 6.57e-05 CCACTGTCAT GTCACGTG CCTTTTCCCT chr2L:8743240-8743360 15 6.57e-05 TCATGTCGGG GTCACGTG CCGCAGACGC chr3L:808864-808984 95 6.57e-05 TTTTGTTAAG GTCACGTG TGTCCGCCCC chrX:9709759-9709879 31 6.57e-05 TTCCAGCCCG GTCACGTG TCCTTCGTAG chr3R:22880143-22880263 25 6.57e-05 TGAGGAGCGA GTCACGTG CCGCTCATTA chr2L:15371376-15371496 25 6.57e-05 CAGTGCGTCG GTCACGTG CCGCAAATTC chr2L:4132414-4132534 32 6.57e-05 CGTCCGCCCG GTCACGTG TTGGCAACAA chr3R:10419613-10419733 52 6.57e-05 AATTTTCATT GTCACGTG GCGGTAATTA chrX:20726584-20726704 61 6.57e-05 AATTGCATGC GTCACGTG ACAGCCAGAC chr3R:10540354-10540474 77 6.57e-05 CCGTTTGACG GTCACGTG ACCCTAATAA chr3L:4081382-4081502 73 6.57e-05 CACAATTGCG GTCACGTG CGAGGACTGC chr3L:12313419-12313539 57 6.57e-05 ACCAGTCAAA GTCACGTG TCAAATAAAA chr3L:15720297-15720417 30 8.22e-05 TTACGGCCAG CACACGTG CAGTCACCAT chr2L:6316966-6317086 2 8.22e-05 G CACACGTG TTCGATGTGC chr2R:22863097-22863217 92 8.22e-05 ATCCACGTGC CACACGTG CCCCCGAAAA chr2R:15051513-15051633 56 8.22e-05 ACCTGGCACA CACACGTG TCAAAGCAAA chr2L:19104522-19104642 27 8.22e-05 CGGCCGGGAA CACACGTG CAGTGGACGA chr3R:4886552-4886672 85 8.22e-05 CGTGTGCAAG CACACGTG TGCCGAGTCC chr2R:8000441-8000561 89 8.22e-05 GAGCGTCCAG CACACGTG CGGGTCGTGC chr2L:499332-499452 55 8.22e-05 GATAGGGGGA CACACGTG GACAGGAAAA chr2L:19901004-19901124 97 8.22e-05 ACGTGTCACG CACACGTG CGTATTATTT chr3L:6855240-6855360 56 8.22e-05 CAAATCAAAA CACACGTG GCCGCAATTG chr2L:1447791-1447911 104 8.22e-05 TCTAATGTGC CACACGTG GCCTTGCGA chr3R:28576966-28577086 102 9.89e-05 GGCAGAGGAT GACGCGTG GCAGGACTTT chr3L:5986680-5986800 43 9.89e-05 TTTTGGCCGA GACGCGTG CCGAAATGAA chr3R:22935869-22935989 93 9.89e-05 TTTATTAATC GACGCGTG TCACTTATTA chr2L:2639584-2639704 98 1.16e-04 TGAATGAATT CGCACGTG TCCGGAATGA chrX:1423523-1423643 59 1.16e-04 ATGCTGCAAC CGCACGTG GCAGGAAAAC chr3R:8227057-8227177 32 1.16e-04 GCCCCGAAGG CGCACGTG ATGCGCTAAT chr2L:7569578-7569698 98 1.16e-04 AATGCGATGG CGCACGTG TCCAAGTGCC chrX:602108-602228 102 1.16e-04 TTTTTCCGCC CGCACGTG CCGCATTGTG chrX:14955623-14955743 62 1.16e-04 GGGGGCGCCG CGCACGTG TCGACGTCGC chr2R:13081453-13081573 57 1.16e-04 GCGAGCTGTT CGCACGTG GAGCACGTGC chr3L:14101855-14101975 64 1.16e-04 GGTGAGGGGT CGCACGTG CAGCGCGTGT chr2R:5741967-5742087 51 1.16e-04 GAGAACAAGC CGCACGTG TGCCCAAGCC chr3L:2846736-2846856 8 1.48e-04 GTGCCCC GGCGCGTG GCGGAAGGAC chr3R:26123455-26123575 88 1.48e-04 ACTCAAGAGA TACACGTG CCGCCAACAG chr3L:13645435-13645555 33 1.48e-04 CCTCTGTGTG TACACGTG TGAGTTCAAT chr2R:15066497-15066617 71 1.48e-04 TGTAAACATT GGCGCGTG CCGTTCGGCC chr3L:22248213-22248333 65 1.48e-04 CCACATGGAC GGCGCGTG CCTTGCACGC chrX:5541520-5541640 95 1.48e-04 TGGCTGCACT TACACGTG TCATCGCAGC chr2R:21788658-21788778 74 1.98e-04 TTCGCGTATG TGCACGTG TCTGATAGCG chr2L:19221658-19221778 26 1.98e-04 CTGGGCCACG GACACGCG TCTCTTGTGC chrX:1814813-1814933 105 1.98e-04 CCTGCCCACG TGCACGTG TCCTGCCC chr2R:22374420-22374540 65 1.98e-04 CGGCAAAATG TGCACGTG CTGCACCAGC chr3L:13155408-13155528 76 1.98e-04 CCCAAATGCC GACACGCG CACAGGATTT chrX:20730707-20730827 52 1.98e-04 CGGTGAGAAG AACACGTG TCCACGCAAA chr2L:19807139-19807259 51 1.98e-04 CCCGCTGTGG AACACGTG GCGTATTAAC chr3R:9133362-9133482 72 1.98e-04 GTCTCCCAAG TGCACgtg tgtgtgtgtg chrX:8769296-8769416 86 1.98e-04 GCAAAATGCT GACACGCG TTCGAGTTTC chrX:20279236-20279356 74 1.98e-04 CATGGCGCCG TGCACGTG CTCATCCACC chr3R:22191460-22191580 73 1.98e-04 TTAAAACACA AACACGTG CAGTACGCAT chr3R:10371185-10371305 61 1.98e-04 CTTTTTGTTT TGCACGTG GCTCGTACGG chr2R:19803238-19803358 16 1.98e-04 GCGGCGGGCA AACACGTG ACTTTAAAGC chrX:4194655-4194775 80 2.32e-04 TCGTTAAAAC GGCACGCG TCAGAAATCA chr2R:5819846-5819966 98 2.32e-04 CAAACATTTC GGCACGCG CACGCACCCC chr3L:22349646-22349766 26 2.32e-04 GCCAGCCACC AGCACGTG TACCAAGCTT chr2L:2402742-2402862 107 2.32e-04 GCACGTTGGC AGCACGTG TCCGGG chr2L:10496500-10496620 34 2.32e-04 TTCGTCACCT GGCACGCG TCACGCTGAC chr3L:8543629-8543749 39 2.65e-04 GGAGCACCAG GACACATG TCGATGCGTT chr3R:21545447-21545567 113 2.65e-04 TGTGACTGAA GACACATG chr3R:27007166-27007286 105 2.98e-04 TTTCTTCTTG GCCGCGTG TCCCTATG chr2R:12907992-12908112 31 2.98e-04 CCCGTCGCTT GCCGCGTG CCGCCTGCGA chrX:8634705-8634825 62 2.98e-04 AGTGGCCGCA GCCGCGTG GCAAGTGTTA chr2L:19091126-19091246 32 2.98e-04 GGAAATTCTA GCCGCGTG GAAACTCCGG chr3R:22261586-22261706 57 2.98e-04 CAGCATTGTT GCCGCGTG CCAACCAAAA chr2R:20413429-20413549 8 2.98e-04 TATTAGC GCCGCGTG TCTGGTAATT chrX:1255858-1255978 29 2.98e-04 CTGAAAATGG GCCGCGTG GCGATTCAAT chrX:3870130-3870250 60 2.98e-04 GATTCGGTAA GCCGCGTG CCGAGTTGTG chr2L:18978868-18978988 83 3.31e-04 GGCGTCAAAG GTCGCGTG GCACGATGTC chr3R:19985449-19985569 43 3.31e-04 ATGGTTTTTG GTCGCGTG GCCTTATTGG chr3L:905534-905654 51 3.31e-04 TTGGTCGCCG GTCGCGTG CCCAGAGCAC chr3R:17707801-17707921 97 3.31e-04 ctgcagtggc ggcACATG GTGCGGTGAG chr2L:6828899-6829019 96 3.31e-04 AGCGACATCG GGCACATG CTTAAGCTCA chr3R:15598177-15598297 64 3.31e-04 CGTGCCGCCA GTCGCGTG TCTGCTCAGT chr3L:5988137-5988257 27 3.47e-04 GTGTGTCCTG TCCACGTG TGCCCTGCTT chr3R:25796002-25796122 110 3.47e-04 CTCAAGTTTG TCCACGTG CCG chr3R:28593834-28593954 66 3.61e-04 ATCATGGGAG TTCACGTG CAGAGCACGC chr3R:31014574-31014694 76 3.96e-04 GTGTAAGAGG GCCACGCG GCGTATGCGC chr3R:21517414-21517534 21 4.29e-04 TGCCTTTTGA GTCACGCG CTTGGCAACA chrX:4388021-4388141 46 4.29e-04 CTTCCTTCCG ATCACGTG GCCAAAACGC chr2L:21876166-21876286 81 4.77e-04 caccgaccTT GTCACATG ACACCTGCAA chr3L:5179013-5179133 67 4.77e-04 CACAAACACA CACGCGTG CACACACACT chr2L:5988264-5988384 96 5.10e-04 GGGGCATTCG GACACTTG CAGCGGCTGA chrX:598797-598917 73 5.59e-04 ATGGACTACT GGCACTTG GGATAAGTGG chr3L:13196724-13196844 100 5.59e-04 AAATTGGCAA CACACGCG ATGAGGCGAC chr2L:13706804-13706924 76 6.10e-04 CATGGTCGTC TGCGCGTG GGCAGTGGGG chr2L:1120341-1120461 90 6.10e-04 TTTTTTGCAA TGCGCGTG TCTCTGCGGC chr2L:5927509-5927629 63 7.29e-04 GTTTTATTTT GACAAGTG CCGAGTGTTG chr3L:22527409-22527529 45 7.29e-04 TCAAAGGTGG CACACATG TCACTGGCGA chrX:15364092-15364212 42 7.29e-04 aacacacaAG GACACGAG GGATTCCACG chr2R:22524689-22524809 29 7.63e-04 AATTATTGCG GACGCATG CAGGCATTTG chr3R:30600112-30600232 19 8.64e-04 CACGCAGGAA AACACGCG CGAAAAGTGT chr3R:5571898-5572018 28 8.64e-04 CGATAAGTGT TGCACGCG TATCAATATT chr3L:6106039-6106159 58 8.64e-04 GAATGATTTT GGCACGAG TCGTTCATAA chr3R:17588944-17589064 71 8.64e-04 TTTCCCATCG AACACGCG CCCACGAGCG chr3R:4913784-4913904 54 9.11e-04 AATACCTAGA GCCACTTG TTTGTTCGTT chr2R:12699420-12699540 100 9.60e-04 GGGAATAATG AGCACGCG TCCCTTTGTC chr2R:7998688-7998808 30 9.60e-04 CTCAAACTGG AGCACGCG CCGGTCGTGT chr3R:19069403-19069523 88 1.04e-03 ATAAAATCCA GACACACG CCTTCCGCTG chr4:1103959-1104079 30 1.04e-03 CACAATGCTT GACACACG ACCACAACAC chrX:12266125-12266245 83 1.09e-03 GCCGCACCGC GCCGCGCG TCGGCAACAT chr3L:12729756-12729876 38 1.09e-03 TCCCACAAGG CTCACGCG AAAAGCAATA chr2L:19087469-19087589 101 1.16e-03 ATGTGCCTTC ATCGCGTG CGTGCCACTC chrX:13815072-13815192 51 1.16e-03 ATAATGGCAC ATCGCGTG CCGGCAATTA chr2L:2397021-2397141 108 1.16e-03 AACAGAAAGC GGCACACG CCGGG chr2R:6587167-6587287 109 1.31e-03 GCCGCAAGTC GTCAAGTG AAAT chr2L:19010176-19010296 63 1.31e-03 CATTTACGTG GCCGCATG CTGTCAGGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:15454167-15454287 1.6e-05 71_[+1]_41 chr3L:12648580-12648700 1.6e-05 85_[+1]_27 chr3R:4855990-4856110 1.6e-05 59_[+1]_53 chr3R:26935538-26935658 1.6e-05 64_[+1]_48 chr2L:19802050-19802170 1.6e-05 40_[+1]_72 chrX:17786504-17786624 1.6e-05 65_[+1]_47 chrX:12344826-12344946 1.6e-05 26_[+1]_86 chr3L:18411450-18411570 1.6e-05 41_[+1]_71 chr3L:18447197-18447317 1.6e-05 52_[+1]_60 chr3R:19684248-19684368 1.6e-05 91_[+1]_21 chr2R:20893199-20893319 1.6e-05 28_[+1]_84 chr2L:10569671-10569791 1.6e-05 52_[+1]_60 chr3L:14589470-14589590 1.6e-05 59_[+1]_53 chr3L:3566890-3567010 1.6e-05 62_[+1]_50 chr3R:30904130-30904250 1.6e-05 54_[+1]_58 chrX:10533986-10534106 1.6e-05 41_[+1]_71 chr3L:18325478-18325598 1.6e-05 78_[+1]_34 chr3L:6036680-6036800 1.6e-05 62_[+1]_50 chr3R:6464461-6464581 1.6e-05 5_[+1]_107 chr3R:7137036-7137156 1.6e-05 21_[+1]_91 chr2R:12704139-12704259 1.6e-05 79_[+1]_33 chr3L:16516906-16517026 1.6e-05 61_[+1]_51 chr3L:22396986-22397106 1.6e-05 46_[+1]_66 chr2R:18391657-18391777 1.6e-05 54_[+1]_58 chr3L:13194676-13194796 1.6e-05 85_[+1]_27 chr2L:19227902-19228022 1.6e-05 60_[+1]_52 chr2L:11431041-11431161 1.6e-05 63_[+1]_49 chr2L:9665441-9665561 1.6e-05 67_[+1]_45 chrX:4265466-4265586 1.6e-05 11_[+1]_101 chr2L:15372078-15372198 1.6e-05 2_[+1]_110 chrX:8723532-8723652 1.6e-05 52_[+1]_60 chrX:17407876-17407996 1.6e-05 12_[+1]_100 chr2L:20225972-20226092 1.6e-05 35_[+1]_77 chr2L:8804267-8804387 1.6e-05 38_[+1]_74 chr3R:27616632-27616752 1.6e-05 90_[+1]_22 chr3R:29707415-29707535 3.3e-05 98_[+1]_14 chr2L:14889819-14889939 3.3e-05 69_[+1]_43 chr2R:16369235-16369355 3.3e-05 70_[+1]_42 chr3R:15072328-15072448 3.3e-05 57_[+1]_55 chr2R:15336994-15337114 3.3e-05 52_[+1]_60 chr3L:11361635-11361755 3.3e-05 88_[+1]_24 chr3L:1931455-1931575 3.3e-05 58_[+1]_54 chr2R:23830809-23830929 3.3e-05 59_[+1]_53 chr2R:19785436-19785556 3.3e-05 55_[+1]_57 chr2L:1308063-1308183 3.3e-05 68_[+1]_44 chr3R:5099137-5099257 3.3e-05 60_[+1]_52 chrX:2684065-2684185 3.3e-05 30_[+1]_82 chr2R:12699209-12699329 3.3e-05 11_[+1]_101 chr3L:8219104-8219224 3.3e-05 85_[+1]_27 chr3L:11738886-11739006 3.3e-05 59_[+1]_53 chrX:4215520-4215640 3.3e-05 70_[+1]_42 chr3L:21211745-21211865 3.3e-05 50_[+1]_62 chr3L:17987364-17987484 3.3e-05 64_[+1]_48 chr3R:29378888-29379008 3.3e-05 60_[+1]_52 chr3L:22118409-22118529 3.3e-05 48_[+1]_64 chrX:865350-865470 3.3e-05 62_[+1]_50 chr2R:14533162-14533282 3.3e-05 65_[+1]_47 chr3R:5574005-5574125 3.3e-05 49_[+1]_63 chr2L:17452223-17452343 3.3e-05 98_[+1]_14 chr3L:12363851-12363971 3.3e-05 66_[+1]_46 chr3L:795140-795260 3.3e-05 17_[+1]_95 chr2R:8015201-8015321 5e-05 49_[+1]_63 chr3L:7474907-7475027 5e-05 39_[+1]_73 chr3R:15532168-15532288 5e-05 103_[+1]_9 chr2L:1788098-1788218 5e-05 41_[+1]_71 chr2L:13051300-13051420 5e-05 16_[+1]_96 chrX:19446530-19446650 5e-05 41_[+1]_71 chrX:1897871-1897991 5e-05 95_[+1]_17 chr3L:15662661-15662781 5e-05 22_[+1]_90 chrX:14296702-14296822 5e-05 72_[+1]_40 chr3R:16564914-16565034 5e-05 57_[+1]_55 chr2R:14017702-14017822 5e-05 39_[+1]_73 chr3L:810384-810504 5e-05 2_[+1]_110 chrX:17413686-17413806 5e-05 67_[+1]_45 chr2R:20929066-20929186 5e-05 73_[+1]_39 chrX:18532764-18532884 5e-05 10_[+1]_102 chr3R:31296193-31296313 5e-05 66_[+1]_46 chr2R:15720311-15720431 5e-05 77_[+1]_35 chr3R:28847692-28847812 5e-05 61_[+1]_51 chr3L:22113325-22113445 5e-05 11_[+1]_101 chr3L:6108403-6108523 5e-05 91_[+1]_21 chr3L:18448128-18448248 6.6e-05 90_[+1]_22 chr2L:6630339-6630459 6.6e-05 43_[+1]_69 chr2L:10550466-10550586 6.6e-05 53_[+1]_59 chr3R:27440034-27440154 6.6e-05 50_[+1]_62 chr2L:8743240-8743360 6.6e-05 14_[+1]_98 chr3L:808864-808984 6.6e-05 94_[+1]_18 chrX:9709759-9709879 6.6e-05 30_[+1]_82 chr3R:22880143-22880263 6.6e-05 24_[+1]_88 chr2L:15371376-15371496 6.6e-05 24_[+1]_88 chr2L:4132414-4132534 6.6e-05 31_[+1]_81 chr3R:10419613-10419733 6.6e-05 51_[+1]_61 chrX:20726584-20726704 6.6e-05 60_[+1]_52 chr3R:10540354-10540474 6.6e-05 76_[+1]_36 chr3L:4081382-4081502 6.6e-05 72_[+1]_40 chr3L:12313419-12313539 6.6e-05 56_[+1]_56 chr3L:15720297-15720417 8.2e-05 29_[+1]_83 chr2L:6316966-6317086 8.2e-05 1_[+1]_111 chr2R:22863097-22863217 8.2e-05 91_[+1]_21 chr2R:15051513-15051633 8.2e-05 55_[+1]_57 chr2L:19104522-19104642 8.2e-05 26_[+1]_86 chr3R:4886552-4886672 8.2e-05 84_[+1]_28 chr2R:8000441-8000561 8.2e-05 88_[+1]_24 chr2L:499332-499452 8.2e-05 54_[+1]_58 chr2L:19901004-19901124 8.2e-05 96_[+1]_16 chr3L:6855240-6855360 8.2e-05 55_[+1]_57 chr2L:1447791-1447911 8.2e-05 103_[+1]_9 chr3R:28576966-28577086 9.9e-05 101_[+1]_11 chr3L:5986680-5986800 9.9e-05 42_[+1]_70 chr3R:22935869-22935989 9.9e-05 92_[+1]_20 chr2L:2639584-2639704 0.00012 97_[+1]_15 chrX:1423523-1423643 0.00012 58_[+1]_54 chr3R:8227057-8227177 0.00012 31_[+1]_81 chr2L:7569578-7569698 0.00012 97_[+1]_15 chrX:602108-602228 0.00012 101_[+1]_11 chrX:14955623-14955743 0.00012 61_[+1]_51 chr2R:13081453-13081573 0.00012 56_[+1]_56 chr3L:14101855-14101975 0.00012 63_[+1]_49 chr2R:5741967-5742087 0.00012 50_[+1]_62 chr3L:2846736-2846856 0.00015 7_[+1]_105 chr3R:26123455-26123575 0.00015 87_[+1]_25 chr3L:13645435-13645555 0.00015 32_[+1]_80 chr2R:15066497-15066617 0.00015 70_[+1]_42 chr3L:22248213-22248333 0.00015 64_[+1]_48 chrX:5541520-5541640 0.00015 94_[+1]_18 chr2R:21788658-21788778 0.0002 73_[+1]_39 chr2L:19221658-19221778 0.0002 25_[+1]_87 chrX:1814813-1814933 0.0002 104_[+1]_8 chr2R:22374420-22374540 0.0002 64_[+1]_48 chr3L:13155408-13155528 0.0002 75_[+1]_37 chrX:20730707-20730827 0.0002 51_[+1]_61 chr2L:19807139-19807259 0.0002 50_[+1]_62 chr3R:9133362-9133482 0.0002 71_[+1]_41 chrX:8769296-8769416 0.0002 85_[+1]_27 chrX:20279236-20279356 0.0002 73_[+1]_39 chr3R:22191460-22191580 0.0002 72_[+1]_40 chr3R:10371185-10371305 0.0002 60_[+1]_52 chr2R:19803238-19803358 0.0002 15_[+1]_97 chrX:4194655-4194775 0.00023 79_[+1]_33 chr2R:5819846-5819966 0.00023 97_[+1]_15 chr3L:22349646-22349766 0.00023 25_[+1]_87 chr2L:2402742-2402862 0.00023 106_[+1]_6 chr2L:10496500-10496620 0.00023 33_[+1]_79 chr3L:8543629-8543749 0.00027 38_[+1]_74 chr3R:21545447-21545567 0.00027 112_[+1] chr3R:27007166-27007286 0.0003 104_[+1]_8 chr2R:12907992-12908112 0.0003 30_[+1]_82 chrX:8634705-8634825 0.0003 61_[+1]_51 chr2L:19091126-19091246 0.0003 31_[+1]_81 chr3R:22261586-22261706 0.0003 56_[+1]_56 chr2R:20413429-20413549 0.0003 7_[+1]_105 chrX:1255858-1255978 0.0003 28_[+1]_84 chrX:3870130-3870250 0.0003 59_[+1]_53 chr2L:18978868-18978988 0.00033 82_[+1]_30 chr3R:19985449-19985569 0.00033 42_[+1]_70 chr3L:905534-905654 0.00033 50_[+1]_62 chr3R:17707801-17707921 0.00033 96_[+1]_16 chr2L:6828899-6829019 0.00033 95_[+1]_17 chr3R:15598177-15598297 0.00033 63_[+1]_49 chr3L:5988137-5988257 0.00035 26_[+1]_86 chr3R:25796002-25796122 0.00035 109_[+1]_3 chr3R:28593834-28593954 0.00036 65_[+1]_47 chr3R:31014574-31014694 0.0004 75_[+1]_37 chr3R:21517414-21517534 0.00043 20_[+1]_92 chrX:4388021-4388141 0.00043 45_[+1]_67 chr2L:21876166-21876286 0.00048 80_[+1]_32 chr3L:5179013-5179133 0.00048 66_[+1]_46 chr2L:5988264-5988384 0.00051 95_[+1]_17 chrX:598797-598917 0.00056 72_[+1]_40 chr3L:13196724-13196844 0.00056 99_[+1]_13 chr2L:13706804-13706924 0.00061 75_[+1]_37 chr2L:1120341-1120461 0.00061 89_[+1]_23 chr2L:5927509-5927629 0.00073 62_[+1]_50 chr3L:22527409-22527529 0.00073 44_[+1]_68 chrX:15364092-15364212 0.00073 41_[+1]_71 chr2R:22524689-22524809 0.00076 28_[+1]_84 chr3R:30600112-30600232 0.00086 18_[+1]_94 chr3R:5571898-5572018 0.00086 27_[+1]_85 chr3L:6106039-6106159 0.00086 57_[+1]_55 chr3R:17588944-17589064 0.00086 70_[+1]_42 chr3R:4913784-4913904 0.00091 53_[+1]_59 chr2R:12699420-12699540 0.00096 99_[+1]_13 chr2R:7998688-7998808 0.00096 29_[+1]_83 chr3R:19069403-19069523 0.001 87_[+1]_25 chr4:1103959-1104079 0.001 29_[+1]_83 chrX:12266125-12266245 0.0011 82_[+1]_30 chr3L:12729756-12729876 0.0011 37_[+1]_75 chr2L:19087469-19087589 0.0012 100_[+1]_12 chrX:13815072-13815192 0.0012 50_[+1]_62 chr2L:2397021-2397141 0.0012 107_[+1]_5 chr2R:6587167-6587287 0.0013 108_[+1]_4 chr2L:19010176-19010296 0.0013 62_[+1]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRCACGTG width=8 seqs=192 chr2L:15454167-15454287 ( 72) GACACGTG 1 chr3L:12648580-12648700 ( 86) GACACGTG 1 chr3R:4855990-4856110 ( 60) GACACGTG 1 chr3R:26935538-26935658 ( 65) GACACGTG 1 chr2L:19802050-19802170 ( 41) GACACGTG 1 chrX:17786504-17786624 ( 66) GACACGTG 1 chrX:12344826-12344946 ( 27) GACACGTG 1 chr3L:18411450-18411570 ( 42) GACACGTG 1 chr3L:18447197-18447317 ( 53) GACACGTG 1 chr3R:19684248-19684368 ( 92) GACACGTG 1 chr2R:20893199-20893319 ( 29) GACACGTG 1 chr2L:10569671-10569791 ( 53) GACACGTG 1 chr3L:14589470-14589590 ( 60) GACACGTG 1 chr3L:3566890-3567010 ( 63) GACACGTG 1 chr3R:30904130-30904250 ( 55) GACACGTG 1 chrX:10533986-10534106 ( 42) GACACGTG 1 chr3L:18325478-18325598 ( 79) GACACGTG 1 chr3L:6036680-6036800 ( 63) GACACGTG 1 chr3R:6464461-6464581 ( 6) GACACGTG 1 chr3R:7137036-7137156 ( 22) GACACGTG 1 chr2R:12704139-12704259 ( 80) GACACGTG 1 chr3L:16516906-16517026 ( 62) GACACGTG 1 chr3L:22396986-22397106 ( 47) GACACGTG 1 chr2R:18391657-18391777 ( 55) GACACGTG 1 chr3L:13194676-13194796 ( 86) GACACGTG 1 chr2L:19227902-19228022 ( 61) GACACGTG 1 chr2L:11431041-11431161 ( 64) GACACGTG 1 chr2L:9665441-9665561 ( 68) GACACGTG 1 chrX:4265466-4265586 ( 12) GACACGTG 1 chr2L:15372078-15372198 ( 3) GACACGTG 1 chrX:8723532-8723652 ( 53) GACACGTG 1 chrX:17407876-17407996 ( 13) GACACGTG 1 chr2L:20225972-20226092 ( 36) GACACGTG 1 chr2L:8804267-8804387 ( 39) GACACGTG 1 chr3R:27616632-27616752 ( 91) GACACGTG 1 chr3R:29707415-29707535 ( 99) GGCACGTG 1 chr2L:14889819-14889939 ( 70) GGCACGTG 1 chr2R:16369235-16369355 ( 71) GGCACGTG 1 chr3R:15072328-15072448 ( 58) GGCACGTG 1 chr2R:15336994-15337114 ( 53) GGCACGTG 1 chr3L:11361635-11361755 ( 89) GGCACGTG 1 chr3L:1931455-1931575 ( 59) GGCACGTG 1 chr2R:23830809-23830929 ( 60) GGCACGTG 1 chr2R:19785436-19785556 ( 56) GGCACGTG 1 chr2L:1308063-1308183 ( 69) GGCACGTG 1 chr3R:5099137-5099257 ( 61) GGCACGTG 1 chrX:2684065-2684185 ( 31) GGCACGTG 1 chr2R:12699209-12699329 ( 12) GGCACGTG 1 chr3L:8219104-8219224 ( 86) GGCACGTG 1 chr3L:11738886-11739006 ( 60) GGCACGTG 1 chrX:4215520-4215640 ( 71) GGCACGTG 1 chr3L:21211745-21211865 ( 51) GGCACGTG 1 chr3L:17987364-17987484 ( 65) GGCACGTG 1 chr3R:29378888-29379008 ( 61) GGCACGTG 1 chr3L:22118409-22118529 ( 49) GGCACGTG 1 chrX:865350-865470 ( 63) GGCACGTG 1 chr2R:14533162-14533282 ( 66) GGCACGTG 1 chr3R:5574005-5574125 ( 50) GGCACGTG 1 chr2L:17452223-17452343 ( 99) GGCACGTG 1 chr3L:12363851-12363971 ( 67) GGCACGTG 1 chr3L:795140-795260 ( 18) GGCACGTG 1 chr2R:8015201-8015321 ( 50) GCCACGTG 1 chr3L:7474907-7475027 ( 40) GCCACGTG 1 chr3R:15532168-15532288 ( 104) GCCACGTG 1 chr2L:1788098-1788218 ( 42) GCCACGTG 1 chr2L:13051300-13051420 ( 17) GCCACGTG 1 chrX:19446530-19446650 ( 42) GCCACGTG 1 chrX:1897871-1897991 ( 96) GCCACGTG 1 chr3L:15662661-15662781 ( 23) GCCACGTG 1 chrX:14296702-14296822 ( 73) GCCACGTG 1 chr3R:16564914-16565034 ( 58) GCCACGTG 1 chr2R:14017702-14017822 ( 40) GCCACGTG 1 chr3L:810384-810504 ( 3) GCCACGTG 1 chrX:17413686-17413806 ( 68) GCCACGTG 1 chr2R:20929066-20929186 ( 74) GCCACGTG 1 chrX:18532764-18532884 ( 11) GCCACGTG 1 chr3R:31296193-31296313 ( 67) GCCACGTG 1 chr2R:15720311-15720431 ( 78) GCCACGTG 1 chr3R:28847692-28847812 ( 62) GCCACGTG 1 chr3L:22113325-22113445 ( 12) GCCACGTG 1 chr3L:6108403-6108523 ( 92) GCCACGTG 1 chr3L:18448128-18448248 ( 91) GTCACGTG 1 chr2L:6630339-6630459 ( 44) GTCACGTG 1 chr2L:10550466-10550586 ( 54) GTCACGTG 1 chr3R:27440034-27440154 ( 51) GTCACGTG 1 chr2L:8743240-8743360 ( 15) GTCACGTG 1 chr3L:808864-808984 ( 95) GTCACGTG 1 chrX:9709759-9709879 ( 31) GTCACGTG 1 chr3R:22880143-22880263 ( 25) GTCACGTG 1 chr2L:15371376-15371496 ( 25) GTCACGTG 1 chr2L:4132414-4132534 ( 32) GTCACGTG 1 chr3R:10419613-10419733 ( 52) GTCACGTG 1 chrX:20726584-20726704 ( 61) GTCACGTG 1 chr3R:10540354-10540474 ( 77) GTCACGTG 1 chr3L:4081382-4081502 ( 73) GTCACGTG 1 chr3L:12313419-12313539 ( 57) GTCACGTG 1 chr3L:15720297-15720417 ( 30) CACACGTG 1 chr2L:6316966-6317086 ( 2) CACACGTG 1 chr2R:22863097-22863217 ( 92) CACACGTG 1 chr2R:15051513-15051633 ( 56) CACACGTG 1 chr2L:19104522-19104642 ( 27) CACACGTG 1 chr3R:4886552-4886672 ( 85) CACACGTG 1 chr2R:8000441-8000561 ( 89) CACACGTG 1 chr2L:499332-499452 ( 55) CACACGTG 1 chr2L:19901004-19901124 ( 97) CACACGTG 1 chr3L:6855240-6855360 ( 56) CACACGTG 1 chr2L:1447791-1447911 ( 104) CACACGTG 1 chr3R:28576966-28577086 ( 102) GACGCGTG 1 chr3L:5986680-5986800 ( 43) GACGCGTG 1 chr3R:22935869-22935989 ( 93) GACGCGTG 1 chr2L:2639584-2639704 ( 98) CGCACGTG 1 chrX:1423523-1423643 ( 59) CGCACGTG 1 chr3R:8227057-8227177 ( 32) CGCACGTG 1 chr2L:7569578-7569698 ( 98) CGCACGTG 1 chrX:602108-602228 ( 102) CGCACGTG 1 chrX:14955623-14955743 ( 62) CGCACGTG 1 chr2R:13081453-13081573 ( 57) CGCACGTG 1 chr3L:14101855-14101975 ( 64) CGCACGTG 1 chr2R:5741967-5742087 ( 51) CGCACGTG 1 chr3L:2846736-2846856 ( 8) GGCGCGTG 1 chr3R:26123455-26123575 ( 88) TACACGTG 1 chr3L:13645435-13645555 ( 33) TACACGTG 1 chr2R:15066497-15066617 ( 71) GGCGCGTG 1 chr3L:22248213-22248333 ( 65) GGCGCGTG 1 chrX:5541520-5541640 ( 95) TACACGTG 1 chr2R:21788658-21788778 ( 74) TGCACGTG 1 chr2L:19221658-19221778 ( 26) GACACGCG 1 chrX:1814813-1814933 ( 105) TGCACGTG 1 chr2R:22374420-22374540 ( 65) TGCACGTG 1 chr3L:13155408-13155528 ( 76) GACACGCG 1 chrX:20730707-20730827 ( 52) AACACGTG 1 chr2L:19807139-19807259 ( 51) AACACGTG 1 chr3R:9133362-9133482 ( 72) TGCACGTG 1 chrX:8769296-8769416 ( 86) GACACGCG 1 chrX:20279236-20279356 ( 74) TGCACGTG 1 chr3R:22191460-22191580 ( 73) AACACGTG 1 chr3R:10371185-10371305 ( 61) TGCACGTG 1 chr2R:19803238-19803358 ( 16) AACACGTG 1 chrX:4194655-4194775 ( 80) GGCACGCG 1 chr2R:5819846-5819966 ( 98) GGCACGCG 1 chr3L:22349646-22349766 ( 26) AGCACGTG 1 chr2L:2402742-2402862 ( 107) AGCACGTG 1 chr2L:10496500-10496620 ( 34) GGCACGCG 1 chr3L:8543629-8543749 ( 39) GACACATG 1 chr3R:21545447-21545567 ( 113) GACACATG 1 chr3R:27007166-27007286 ( 105) GCCGCGTG 1 chr2R:12907992-12908112 ( 31) GCCGCGTG 1 chrX:8634705-8634825 ( 62) GCCGCGTG 1 chr2L:19091126-19091246 ( 32) GCCGCGTG 1 chr3R:22261586-22261706 ( 57) GCCGCGTG 1 chr2R:20413429-20413549 ( 8) GCCGCGTG 1 chrX:1255858-1255978 ( 29) GCCGCGTG 1 chrX:3870130-3870250 ( 60) GCCGCGTG 1 chr2L:18978868-18978988 ( 83) GTCGCGTG 1 chr3R:19985449-19985569 ( 43) GTCGCGTG 1 chr3L:905534-905654 ( 51) GTCGCGTG 1 chr3R:17707801-17707921 ( 97) GGCACATG 1 chr2L:6828899-6829019 ( 96) GGCACATG 1 chr3R:15598177-15598297 ( 64) GTCGCGTG 1 chr3L:5988137-5988257 ( 27) TCCACGTG 1 chr3R:25796002-25796122 ( 110) TCCACGTG 1 chr3R:28593834-28593954 ( 66) TTCACGTG 1 chr3R:31014574-31014694 ( 76) GCCACGCG 1 chr3R:21517414-21517534 ( 21) GTCACGCG 1 chrX:4388021-4388141 ( 46) ATCACGTG 1 chr2L:21876166-21876286 ( 81) GTCACATG 1 chr3L:5179013-5179133 ( 67) CACGCGTG 1 chr2L:5988264-5988384 ( 96) GACACTTG 1 chrX:598797-598917 ( 73) GGCACTTG 1 chr3L:13196724-13196844 ( 100) CACACGCG 1 chr2L:13706804-13706924 ( 76) TGCGCGTG 1 chr2L:1120341-1120461 ( 90) TGCGCGTG 1 chr2L:5927509-5927629 ( 63) GACAAGTG 1 chr3L:22527409-22527529 ( 45) CACACATG 1 chrX:15364092-15364212 ( 42) GACACGAG 1 chr2R:22524689-22524809 ( 29) GACGCATG 1 chr3R:30600112-30600232 ( 19) AACACGCG 1 chr3R:5571898-5572018 ( 28) TGCACGCG 1 chr3L:6106039-6106159 ( 58) GGCACGAG 1 chr3R:17588944-17589064 ( 71) AACACGCG 1 chr3R:4913784-4913904 ( 54) GCCACTTG 1 chr2R:12699420-12699540 ( 100) AGCACGCG 1 chr2R:7998688-7998808 ( 30) AGCACGCG 1 chr3R:19069403-19069523 ( 88) GACACACG 1 chr4:1103959-1104079 ( 30) GACACACG 1 chrX:12266125-12266245 ( 83) GCCGCGCG 1 chr3L:12729756-12729876 ( 38) CTCACGCG 1 chr2L:19087469-19087589 ( 101) ATCGCGTG 1 chrX:13815072-13815192 ( 51) ATCGCGTG 1 chr2L:2397021-2397141 ( 108) GGCACACG 1 chr2R:6587167-6587287 ( 109) GTCAAGTG 1 chr2L:19010176-19010296 ( 63) GCCGCATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.64125 E= 1.5e-166 -187 -105 151 -160 60 -55 27 -76 -1423 195 -1423 -1423 180 -1423 -92 -1423 -457 193 -1423 -1423 -211 -1423 186 -393 -457 -139 -1423 191 -1423 -1423 197 -1423 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 192 E= 1.5e-166 0.067708 0.125000 0.729167 0.078125 0.375000 0.177083 0.307292 0.140625 0.000000 1.000000 0.000000 0.000000 0.864583 0.000000 0.135417 0.000000 0.010417 0.989583 0.000000 0.000000 0.057292 0.000000 0.927083 0.015625 0.010417 0.098958 0.000000 0.890625 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRCACGTG MEME-1 regular expression -------------------------------------------------------------------------------- G[AG]CACGTG -------------------------------------------------------------------------------- Time 7.27 secs. ******************************************************************************** ******************************************************************************** MOTIF GTGKGYGK MEME-2 width = 8 sites = 36 llr = 307 E-value = 2.8e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::4:: probability G 8:a5a:a5 matrix T 3a:5:6:5 bits 2.1 * 1.9 ** * * 1.7 ** * * 1.5 ** * * Relative 1.2 *** * * Entropy 1.0 ******** (12.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTGGGTGG consensus T T C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:602108-602228 65 1.45e-05 TTGTATTTCT GTGTGTGG GTTTTGCAAC chr2R:21788658-21788778 23 4.37e-05 TCCGATCAGC GTGGGTGG TTTGGTGTTG chr3R:15072328-15072448 31 4.37e-05 ATGGAAATTT GTGTGTGT TTGTGTTGGT chr2R:22374420-22374540 105 4.37e-05 CCCCGCAGTG GTGGGTGG TAGGTCCT chr3L:11361635-11361755 2 4.37e-05 T GTGGGTGG CTCTTGGGCG chr2R:5820527-5820647 22 4.37e-05 CAGGCGGCCG GTGGGTGG CATCAATTAT chr2L:18978868-18978988 111 4.37e-05 TGCGAATATG GTGGGTGG CA chr3R:9133362-9133482 83 4.37e-05 GCACgtgtgt gtgtgtgt gtgCCTGTTC chr2L:13706804-13706924 54 4.37e-05 GGCAACTTTG GTGGGTGG CCAACATGGT chrX:15364092-15364212 73 4.37e-05 GCCCATGGGT GTGGGTGG CGGGGGGTGG chrX:21484118-21484238 57 4.37e-05 AAACATAGGA GTGTGTGT GCGAGCAAAC chr3L:8543629-8543749 106 4.37e-05 CATAACGGGC GTGTGTGT AAAGCGA chrX:18532764-18532884 56 4.37e-05 gtgtgtgtgt gtgtgtgt gtgtgtCTCT chr3L:4081382-4081502 1 4.37e-05 . gtgggtgg tgtgcgttgg chr2L:20225972-20226092 73 4.37e-05 GGgtgtgtgt gtgtgtgt gtgtAAGCTC chr2L:19010176-19010296 101 4.37e-05 CTGCACCACC GTGGGTGG TGGCGCCTCG chr2R:15066497-15066617 30 5.82e-05 GCCAGTGGAT GTGGGTGT GGATGTGCCT chr3L:13645435-13645555 60 7.40e-05 TTGGAAAATC GTGTGCGG CATACGGCAG chr3R:23826018-23826138 51 1.06e-04 TTCTAAGACG GTGGGCGG CGCTCACGCA chrX:15363484-15363604 63 1.06e-04 ACACATCCAA GTGGGCGG TGAAAATTCC chr2R:22524689-22524809 46 1.06e-04 GCAGGCATTT GTGTGCGT GTGCGAACAA chrX:10263274-10263394 18 1.06e-04 CTTCTTATTT GTGTGCGT TATTTTAGGG chr2R:18854494-18854614 29 1.06e-04 TGGAGGAAGT GTGTGCGT AGCCTAAAAC chr3R:15598177-15598297 49 1.06e-04 CCTGCGACGA GTGTGCGT GCCGCCAGTC chr3R:22935869-22935989 52 1.06e-04 AACCCACAGA GTGGGCGG CAGCCTTGTA chr2R:15336994-15337114 41 1.22e-04 GAAACAATTT GTGGGCGT GAGCGGCACG chr3L:810384-810504 28 1.22e-04 TCCGTGGAAA GTGGGCGT GTGGCCGGGA chr2R:19803238-19803358 59 1.35e-04 GAACGCAGTT TTGTGTGG GATTTTCGAA chr2R:15720311-15720431 6 1.35e-04 CACCA TTGTGTGG GCTAACAAAC chr3R:5099137-5099257 48 1.62e-04 TTGGGCTGAT TTGGGTGG CAAATGGCAC chr3R:30904130-30904250 98 1.62e-04 TGGCTGCTGG TTGGGTGG TGCACTTGCC chr3R:4913784-4913904 107 1.62e-04 CTTAAATGGT TTGTGTGT ATGTGT chr3L:1931455-1931575 77 1.76e-04 CCACTGGGAG TTGGGTGT TTCCAAGGAA chr2R:12699209-12699329 90 1.91e-04 ATGGGGCCCA TTGTGCGG TGCAAACACT chr2L:19221658-19221778 38 2.20e-04 CACGCGTCTC TTGTGCGT CCTTGTGGCC chr3L:12363851-12363971 78 2.20e-04 GCACGTGTTG TTGTGCGT GTGATTTATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:602108-602228 1.5e-05 64_[+2]_48 chr2R:21788658-21788778 4.4e-05 22_[+2]_90 chr3R:15072328-15072448 4.4e-05 30_[+2]_82 chr2R:22374420-22374540 4.4e-05 104_[+2]_8 chr3L:11361635-11361755 4.4e-05 1_[+2]_111 chr2R:5820527-5820647 4.4e-05 21_[+2]_91 chr2L:18978868-18978988 4.4e-05 110_[+2]_2 chr3R:9133362-9133482 4.4e-05 82_[+2]_30 chr2L:13706804-13706924 4.4e-05 53_[+2]_59 chrX:15364092-15364212 4.4e-05 72_[+2]_40 chrX:21484118-21484238 4.4e-05 56_[+2]_56 chr3L:8543629-8543749 4.4e-05 105_[+2]_7 chrX:18532764-18532884 4.4e-05 55_[+2]_57 chr3L:4081382-4081502 4.4e-05 [+2]_112 chr2L:20225972-20226092 4.4e-05 72_[+2]_40 chr2L:19010176-19010296 4.4e-05 100_[+2]_12 chr2R:15066497-15066617 5.8e-05 29_[+2]_83 chr3L:13645435-13645555 7.4e-05 59_[+2]_53 chr3R:23826018-23826138 0.00011 50_[+2]_62 chrX:15363484-15363604 0.00011 62_[+2]_50 chr2R:22524689-22524809 0.00011 45_[+2]_67 chrX:10263274-10263394 0.00011 17_[+2]_95 chr2R:18854494-18854614 0.00011 28_[+2]_84 chr3R:15598177-15598297 0.00011 48_[+2]_64 chr3R:22935869-22935989 0.00011 51_[+2]_61 chr2R:15336994-15337114 0.00012 40_[+2]_72 chr3L:810384-810504 0.00012 27_[+2]_85 chr2R:19803238-19803358 0.00014 58_[+2]_54 chr2R:15720311-15720431 0.00014 5_[+2]_107 chr3R:5099137-5099257 0.00016 47_[+2]_65 chr3R:30904130-30904250 0.00016 97_[+2]_15 chr3R:4913784-4913904 0.00016 106_[+2]_6 chr3L:1931455-1931575 0.00018 76_[+2]_36 chr2R:12699209-12699329 0.00019 89_[+2]_23 chr2L:19221658-19221778 0.00022 37_[+2]_75 chr3L:12363851-12363971 0.00022 77_[+2]_35 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGKGYGK width=8 seqs=36 chrX:602108-602228 ( 65) GTGTGTGG 1 chr2R:21788658-21788778 ( 23) GTGGGTGG 1 chr3R:15072328-15072448 ( 31) GTGTGTGT 1 chr2R:22374420-22374540 ( 105) GTGGGTGG 1 chr3L:11361635-11361755 ( 2) GTGGGTGG 1 chr2R:5820527-5820647 ( 22) GTGGGTGG 1 chr2L:18978868-18978988 ( 111) GTGGGTGG 1 chr3R:9133362-9133482 ( 83) GTGTGTGT 1 chr2L:13706804-13706924 ( 54) GTGGGTGG 1 chrX:15364092-15364212 ( 73) GTGGGTGG 1 chrX:21484118-21484238 ( 57) GTGTGTGT 1 chr3L:8543629-8543749 ( 106) GTGTGTGT 1 chrX:18532764-18532884 ( 56) GTGTGTGT 1 chr3L:4081382-4081502 ( 1) GTGGGTGG 1 chr2L:20225972-20226092 ( 73) GTGTGTGT 1 chr2L:19010176-19010296 ( 101) GTGGGTGG 1 chr2R:15066497-15066617 ( 30) GTGGGTGT 1 chr3L:13645435-13645555 ( 60) GTGTGCGG 1 chr3R:23826018-23826138 ( 51) GTGGGCGG 1 chrX:15363484-15363604 ( 63) GTGGGCGG 1 chr2R:22524689-22524809 ( 46) GTGTGCGT 1 chrX:10263274-10263394 ( 18) GTGTGCGT 1 chr2R:18854494-18854614 ( 29) GTGTGCGT 1 chr3R:15598177-15598297 ( 49) GTGTGCGT 1 chr3R:22935869-22935989 ( 52) GTGGGCGG 1 chr2R:15336994-15337114 ( 41) GTGGGCGT 1 chr3L:810384-810504 ( 28) GTGGGCGT 1 chr2R:19803238-19803358 ( 59) TTGTGTGG 1 chr2R:15720311-15720431 ( 6) TTGTGTGG 1 chr3R:5099137-5099257 ( 48) TTGGGTGG 1 chr3R:30904130-30904250 ( 98) TTGGGTGG 1 chr3R:4913784-4913904 ( 107) TTGTGTGT 1 chr3L:1931455-1931575 ( 77) TTGGGTGT 1 chr2R:12699209-12699329 ( 90) TTGTGCGG 1 chr2L:19221658-19221778 ( 38) TTGTGCGT 1 chr3L:12363851-12363971 ( 78) TTGTGCGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.0197 E= 2.8e+001 -1181 -1181 155 7 -1181 -1181 -1181 207 -1181 -1181 197 -1181 -1181 -1181 97 107 -1181 -1181 197 -1181 -1181 48 -1181 143 -1181 -1181 197 -1181 -1181 -1181 105 99 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 36 E= 2.8e+001 0.000000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 0.361111 0.000000 0.638889 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.527778 0.472222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGKGYGK MEME-2 regular expression -------------------------------------------------------------------------------- [GT]TG[GT]G[TC]G[GT] -------------------------------------------------------------------------------- Time 13.15 secs. ******************************************************************************** ******************************************************************************** MOTIF AAWYAAAT MEME-3 width = 8 sites = 19 llr = 181 E-value = 9.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A aa4:aaa: pos.-specific C :::5:::: probability G ::2::::: matrix T ::55:::a bits 2.1 ** **** 1.9 ** **** 1.7 ** **** 1.5 ** **** Relative 1.2 ** **** Entropy 1.0 ** ***** (13.7 bits) 0.8 ** ***** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AATCAAAT consensus AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:4194655-4194775 93 2.64e-05 ACGCGTCAGA AATCAAAT GTCAAGCGAC chr2L:14889819-14889939 52 2.64e-05 TCTGGCAGTA AATCAAAT ACAAAATACT chr2R:12907992-12908112 100 2.64e-05 CGGCCGGGAC AATCAAAT CAGGCAACGA chr3L:11869144-11869264 72 2.64e-05 TGAGCTTTTA AATTAAAT CACAAAATGA chrX:598797-598917 46 2.64e-05 ATAAACGGCA AATTAAAT TACTCATCAA chrX:4215520-4215640 57 2.64e-05 TATAGTCAGT AATTAAAT GACACTGGCA chr3R:15513999-15514119 93 2.64e-05 AGAGACCTTT AATTAAAT TCATATTTGG chr2R:15720311-15720431 26 2.64e-05 TAACAAACAC AATCAAAT GCATTGGCCT chrX:865350-865470 74 2.64e-05 GCACGTGACC AATCAAAT GGGCGTGGCA chr2L:6207794-6207914 12 5.39e-05 CAACTAATGC AAATAAAT TTTTGTGGCA chr3R:15072328-15072448 15 5.39e-05 GTCAATGTCA AAATAAAT GGAAATTTGT chr2R:15336994-15337114 20 5.39e-05 GAAATTGCAT AAACAAAT AGCGAAACAA chr2L:6234297-6234417 81 5.39e-05 TGGTTTTTTT AAATAAAT ATTTTTCAGG chr2L:19807139-19807259 84 5.39e-05 CGACATGAGT AAACAAAT GCCCAAGGGG chr3R:20987648-20987768 17 5.39e-05 CAAAGCAAGC AAACAAAT GAGTAATATC chr2R:20413429-20413549 104 5.39e-05 GGCGCTGTTA AAACAAAT TACTGTCTG chr3L:6036680-6036800 36 8.22e-05 CACTCGGCCC AAGCAAAT TCAATTAACA chr3L:12639414-12639534 26 8.22e-05 GAGGAAGTGG AAGTAAAT TGAAAGCATG chr2R:13081453-13081573 102 8.22e-05 AGTTGCCAGC AAGTAAAT TGCCTGTGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:4194655-4194775 2.6e-05 92_[+3]_20 chr2L:14889819-14889939 2.6e-05 51_[+3]_61 chr2R:12907992-12908112 2.6e-05 99_[+3]_13 chr3L:11869144-11869264 2.6e-05 71_[+3]_41 chrX:598797-598917 2.6e-05 45_[+3]_67 chrX:4215520-4215640 2.6e-05 56_[+3]_56 chr3R:15513999-15514119 2.6e-05 92_[+3]_20 chr2R:15720311-15720431 2.6e-05 25_[+3]_87 chrX:865350-865470 2.6e-05 73_[+3]_39 chr2L:6207794-6207914 5.4e-05 11_[+3]_101 chr3R:15072328-15072448 5.4e-05 14_[+3]_98 chr2R:15336994-15337114 5.4e-05 19_[+3]_93 chr2L:6234297-6234417 5.4e-05 80_[+3]_32 chr2L:19807139-19807259 5.4e-05 83_[+3]_29 chr3R:20987648-20987768 5.4e-05 16_[+3]_96 chr2R:20413429-20413549 5.4e-05 103_[+3]_9 chr3L:6036680-6036800 8.2e-05 35_[+3]_77 chr3L:12639414-12639534 8.2e-05 25_[+3]_87 chr2R:13081453-13081573 8.2e-05 101_[+3]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAWYAAAT width=8 seqs=19 chrX:4194655-4194775 ( 93) AATCAAAT 1 chr2L:14889819-14889939 ( 52) AATCAAAT 1 chr2R:12907992-12908112 ( 100) AATCAAAT 1 chr3L:11869144-11869264 ( 72) AATTAAAT 1 chrX:598797-598917 ( 46) AATTAAAT 1 chrX:4215520-4215640 ( 57) AATTAAAT 1 chr3R:15513999-15514119 ( 93) AATTAAAT 1 chr2R:15720311-15720431 ( 26) AATCAAAT 1 chrX:865350-865470 ( 74) AATCAAAT 1 chr2L:6207794-6207914 ( 12) AAATAAAT 1 chr3R:15072328-15072448 ( 15) AAATAAAT 1 chr2R:15336994-15337114 ( 20) AAACAAAT 1 chr2L:6234297-6234417 ( 81) AAATAAAT 1 chr2L:19807139-19807259 ( 84) AAACAAAT 1 chr3R:20987648-20987768 ( 17) AAACAAAT 1 chr2R:20413429-20413549 ( 104) AAACAAAT 1 chr3L:6036680-6036800 ( 36) AAGCAAAT 1 chr3L:12639414-12639534 ( 26) AAGTAAAT 1 chr2R:13081453-13081573 ( 102) AAGTAAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.00179 E= 9.2e+002 201 -1089 -1089 -1089 201 -1089 -1089 -1089 57 -1089 -69 100 -1089 102 -1089 100 201 -1089 -1089 -1089 201 -1089 -1089 -1089 201 -1089 -1089 -1089 -1089 -1089 -1089 207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 19 E= 9.2e+002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.368421 0.000000 0.157895 0.473684 0.000000 0.526316 0.000000 0.473684 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWYAAAT MEME-3 regular expression -------------------------------------------------------------------------------- AA[TA][CT]AAAT -------------------------------------------------------------------------------- Time 18.98 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTKYWTT MEME-4 width = 8 sites = 27 llr = 237 E-value = 8.9e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::4:: pos.-specific C ::::4::: probability G :::421:: matrix T aaa645aa bits 2.1 *** ** 1.9 *** ** 1.7 *** ** 1.5 *** ** Relative 1.2 *** ** Entropy 1.0 **** ** (12.7 bits) 0.8 **** *** 0.6 **** *** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTTTTTT consensus GCA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:19446530-19446650 110 1.03e-05 CAATACtttt tttttttt ttt chr2L:1120341-1120461 78 1.03e-05 TTTCTGCCCT TTTTTTTT GCAATGCGCG chr3R:20987648-20987768 105 1.03e-05 ACTTTAATAA TTTTTTTT AGTACAAC chr3L:2846736-2846856 101 4.33e-05 CCCAAAGCCC TTTTTATT ATTAGACGAA chr3L:11361635-11361755 73 4.33e-05 GTTTGAGAAC TTTTCTTT TCTGGGCTGG chr2L:6234297-6234417 9 4.33e-05 GGGAAATG TTTTCTTT ACTCTTGGGG chr3R:28576966-28577086 21 4.33e-05 CGTATGGCAC TTTGTTTT CAGATAATGC chr3R:16564914-16565034 4 4.33e-05 GCT TTTGTTTT CCCCATCAAA chr2R:20929066-20929186 89 4.33e-05 GTGCGGGGGA TTTGTTTT AGTTTTCGGC chrX:21001077-21001197 6 4.33e-05 ATGTG TTTTTATT TCCTGGCCAC chrX:12266125-12266245 20 7.84e-05 tttcgcctcc ttttcatt tcattccatt chr3R:26935538-26935658 85 7.84e-05 ACTGAACGCA TTTTCATT TGCCGCTTCG chr2R:16395960-16396080 46 7.84e-05 TGTCGCTTCG TTTTCATT GCTGCGGCAC chrX:17786504-17786624 88 7.84e-05 ACAAGCGGCA TTTGTATT AAGACTTAAT chr3L:905534-905654 103 7.84e-05 TTGTGATTGT TTTGCTTT TCTCTGTTTG chrX:602108-602228 54 7.84e-05 GTCAATTGTT TTTGTATT TCTGTGTGTG chr3R:10419613-10419733 44 7.84e-05 TTGCTGGTAA TTTTCATT GTCACGTGGC chr3L:5986680-5986800 28 7.84e-05 AAGGAACTTT TTTGCTTT TGGCCGAGAC chr3L:18448128-18448248 77 9.09e-05 GCAAATCTGT TTTGCATT CGTGCGGTCA chr3L:6940573-6940693 78 9.09e-05 GCGCACCCTA TTTGCATT GCACCCAAGT chr2R:23830809-23830929 40 1.02e-04 CATTTGTTGT TTTTGTTT GTGTCCATCG chr3R:10371185-10371305 53 1.02e-04 CTTTGTTGCT TTTTGTTT TGCACGTGGC chrX:20730707-20730827 109 1.25e-04 GCTTTCAGTT TTTGGTTT TCGG chr2L:1308063-1308183 41 1.25e-04 GATTAATGGT TTTGGTTT AGCGAAACTG chr2L:1447791-1447911 9 1.38e-04 CGATAATA TTTGGATT AGTTCAAGTC chr3L:808864-808984 84 1.49e-04 CCTCGTGTCG TTTTTGTT AAGGTCACGT chrX:18532764-18532884 22 1.49e-04 CCACGTGCTT TTTTTGTT GTATTTGTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:19446530-19446650 1e-05 109_[+4]_3 chr2L:1120341-1120461 1e-05 77_[+4]_35 chr3R:20987648-20987768 1e-05 104_[+4]_8 chr3L:2846736-2846856 4.3e-05 100_[+4]_12 chr3L:11361635-11361755 4.3e-05 72_[+4]_40 chr2L:6234297-6234417 4.3e-05 8_[+4]_104 chr3R:28576966-28577086 4.3e-05 20_[+4]_92 chr3R:16564914-16565034 4.3e-05 3_[+4]_109 chr2R:20929066-20929186 4.3e-05 88_[+4]_24 chrX:21001077-21001197 4.3e-05 5_[+4]_107 chrX:12266125-12266245 7.8e-05 19_[+4]_93 chr3R:26935538-26935658 7.8e-05 84_[+4]_28 chr2R:16395960-16396080 7.8e-05 45_[+4]_67 chrX:17786504-17786624 7.8e-05 87_[+4]_25 chr3L:905534-905654 7.8e-05 102_[+4]_10 chrX:602108-602228 7.8e-05 53_[+4]_59 chr3R:10419613-10419733 7.8e-05 43_[+4]_69 chr3L:5986680-5986800 7.8e-05 27_[+4]_85 chr3L:18448128-18448248 9.1e-05 76_[+4]_36 chr3L:6940573-6940693 9.1e-05 77_[+4]_35 chr2R:23830809-23830929 0.0001 39_[+4]_73 chr3R:10371185-10371305 0.0001 52_[+4]_60 chrX:20730707-20730827 0.00013 108_[+4]_4 chr2L:1308063-1308183 0.00013 40_[+4]_72 chr2L:1447791-1447911 0.00014 8_[+4]_104 chr3L:808864-808984 0.00015 83_[+4]_29 chrX:18532764-18532884 0.00015 21_[+4]_91 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTKYWTT width=8 seqs=27 chrX:19446530-19446650 ( 110) TTTTTTTT 1 chr2L:1120341-1120461 ( 78) TTTTTTTT 1 chr3R:20987648-20987768 ( 105) TTTTTTTT 1 chr3L:2846736-2846856 ( 101) TTTTTATT 1 chr3L:11361635-11361755 ( 73) TTTTCTTT 1 chr2L:6234297-6234417 ( 9) TTTTCTTT 1 chr3R:28576966-28577086 ( 21) TTTGTTTT 1 chr3R:16564914-16565034 ( 4) TTTGTTTT 1 chr2R:20929066-20929186 ( 89) TTTGTTTT 1 chrX:21001077-21001197 ( 6) TTTTTATT 1 chrX:12266125-12266245 ( 20) TTTTCATT 1 chr3R:26935538-26935658 ( 85) TTTTCATT 1 chr2R:16395960-16396080 ( 46) TTTTCATT 1 chrX:17786504-17786624 ( 88) TTTGTATT 1 chr3L:905534-905654 ( 103) TTTGCTTT 1 chrX:602108-602228 ( 54) TTTGTATT 1 chr3R:10419613-10419733 ( 44) TTTTCATT 1 chr3L:5986680-5986800 ( 28) TTTGCTTT 1 chr3L:18448128-18448248 ( 77) TTTGCATT 1 chr3L:6940573-6940693 ( 78) TTTGCATT 1 chr2R:23830809-23830929 ( 40) TTTTGTTT 1 chr3R:10371185-10371305 ( 53) TTTTGTTT 1 chrX:20730707-20730827 ( 109) TTTGGTTT 1 chr2L:1308063-1308183 ( 41) TTTGGTTT 1 chr2L:1447791-1447911 ( 9) TTTGGATT 1 chr3L:808864-808984 ( 84) TTTTTGTT 1 chrX:18532764-18532884 ( 22) TTTTTGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.9783 E= 8.9e+003 -1140 -1140 -1140 207 -1140 -1140 -1140 207 -1140 -1140 -1140 207 -1140 -1140 80 123 -1140 51 -46 90 72 -1140 -178 113 -1140 -1140 -1140 207 -1140 -1140 -1140 207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 27 E= 8.9e+003 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.444444 0.555556 0.000000 0.370370 0.185185 0.444444 0.407407 0.000000 0.074074 0.518519 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKYWTT MEME-4 regular expression -------------------------------------------------------------------------------- TTT[TG][TC][TA]TT -------------------------------------------------------------------------------- Time 24.76 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTCCTGG MEME-5 width = 8 sites = 10 llr = 105 E-value = 7.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::aa::3 probability G :a::::a7 matrix T a:a::a:: bits 2.1 * * * 1.9 ******* 1.7 ******* 1.5 ******* Relative 1.2 ******* Entropy 1.0 ******** (15.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGTCCTGG consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:6019218-6019338 16 1.50e-05 TGTCCTGAAT TGTCCTGG CGGGCTCACG chr2L:1788098-1788218 68 1.50e-05 AATTGGCGGA TGTCCTGG GCCAGGGCAA chr2R:22863097-22863217 31 1.50e-05 CTGTGAGCAG TGTCCTGG TGGGAAGTGT chrX:20730707-20730827 8 1.50e-05 GGACTCG TGTCCTGG CTTAAGTCCC chr3L:13196724-13196844 34 1.50e-05 CTCCTGGAAA TGTCCTGG GCAGAACCGA chr3R:5574005-5574125 67 1.50e-05 GTCTCGAGCC TGTCCTGG AGCGATGCCC chr2L:19223315-19223435 42 1.50e-05 GTGGCCTTAA TGTCCTGG AGCGACGCGT chrX:1814813-1814933 92 3.02e-05 CGCTGGCACA TGTCCTGC CCACGTGCAC chr2R:21032862-21032982 88 3.02e-05 CGGGAGATCC TGTCCTGC TCCGCTGACT chr3R:15598177-15598297 36 3.02e-05 gagtCCTGTT TGTCCTGC GACGAGTGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:6019218-6019338 1.5e-05 15_[+5]_97 chr2L:1788098-1788218 1.5e-05 67_[+5]_45 chr2R:22863097-22863217 1.5e-05 30_[+5]_82 chrX:20730707-20730827 1.5e-05 7_[+5]_105 chr3L:13196724-13196844 1.5e-05 33_[+5]_79 chr3R:5574005-5574125 1.5e-05 66_[+5]_46 chr2L:19223315-19223435 1.5e-05 41_[+5]_71 chrX:1814813-1814933 3e-05 91_[+5]_21 chr2R:21032862-21032982 3e-05 87_[+5]_25 chr3R:15598177-15598297 3e-05 35_[+5]_77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTCCTGG width=8 seqs=10 chr3L:6019218-6019338 ( 16) TGTCCTGG 1 chr2L:1788098-1788218 ( 68) TGTCCTGG 1 chr2R:22863097-22863217 ( 31) TGTCCTGG 1 chrX:20730707-20730827 ( 8) TGTCCTGG 1 chr3L:13196724-13196844 ( 34) TGTCCTGG 1 chr3R:5574005-5574125 ( 67) TGTCCTGG 1 chr2L:19223315-19223435 ( 42) TGTCCTGG 1 chrX:1814813-1814933 ( 92) TGTCCTGC 1 chr2R:21032862-21032982 ( 88) TGTCCTGC 1 chr3R:15598177-15598297 ( 36) TGTCCTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.7151 E= 7.4e+004 -997 -997 -997 207 -997 -997 197 -997 -997 -997 -997 207 -997 195 -997 -997 -997 195 -997 -997 -997 -997 -997 207 -997 -997 197 -997 -997 21 145 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 7.4e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.300000 0.700000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCCTGG MEME-5 regular expression -------------------------------------------------------------------------------- TGTCCTG[GC] -------------------------------------------------------------------------------- Time 30.49 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:7998688-7998808 5.21e-01 120 chr3L:6108403-6108523 2.45e-02 34_[+1(5.00e-05)]_49_[+1(5.00e-05)]_\ 21 chr3R:27616632-27616752 1.42e-02 90_[+1(1.63e-05)]_22 chr2L:5988264-5988384 5.93e-01 120 chr2L:10496500-10496620 3.80e-01 120 chr2L:8804267-8804387 5.70e-02 38_[+1(1.63e-05)]_74 chr2L:19010176-19010296 2.44e-02 100_[+2(4.37e-05)]_12 chr2R:5741967-5742087 2.87e-02 120 chr3R:18721527-18721647 2.83e-01 120 chr3L:12313419-12313539 2.37e-03 56_[+1(6.57e-05)]_56 chr2L:20225972-20226092 7.96e-04 35_[+1(1.63e-05)]_21_[+2(4.37e-05)]_\ [+2(4.37e-05)]_40 chr2L:1447791-1447911 2.88e-03 103_[+1(8.22e-05)]_9 chr3L:795140-795260 7.30e-03 17_[+1(3.30e-05)]_95 chrX:17407876-17407996 1.98e-03 12_[+1(1.63e-05)]_48_[+1(3.30e-05)]_\ 44 chr3L:6855240-6855360 1.04e-01 55_[+1(8.22e-05)]_57 chrX:8723532-8723652 2.29e-02 52_[+1(1.63e-05)]_2_[+1(6.57e-05)]_\ 50 chr3L:12363851-12363971 2.39e-03 66_[+1(3.30e-05)]_46 chr2L:15372078-15372198 8.47e-03 2_[+1(1.63e-05)]_110 chr3R:17588944-17589064 2.39e-01 120 chr2R:11346195-11346315 6.81e-01 120 chr2L:17452223-17452343 1.41e-02 98_[+1(3.30e-05)]_14 chrX:4265466-4265586 5.37e-02 11_[+1(1.63e-05)]_101 chr3L:22113325-22113445 3.60e-03 11_[+1(5.00e-05)]_101 chr3L:4081382-4081502 3.32e-03 [+2(4.37e-05)]_64_[+1(6.57e-05)]_40 chr3L:14101855-14101975 5.94e-02 120 chr2L:19901004-19901124 2.49e-02 96_[+1(8.22e-05)]_16 chr2L:2402742-2402862 2.47e-02 120 chr3L:6940573-6940693 2.69e-02 77_[+4(9.09e-05)]_35 chr4:1103959-1104079 5.20e-01 120 chr2L:9665441-9665561 9.41e-02 67_[+1(1.63e-05)]_45 chr2L:19223315-19223435 2.03e-02 41_[+5(1.50e-05)]_71 chr3R:5574005-5574125 3.83e-03 49_[+1(3.30e-05)]_9_[+5(1.50e-05)]_\ 46 chr2R:14533162-14533282 1.81e-01 65_[+1(3.30e-05)]_47 chr3R:22935869-22935989 1.35e-02 92_[+1(9.89e-05)]_20 chr3R:15598177-15598297 4.23e-04 35_[+5(3.02e-05)]_77 chrX:3870130-3870250 2.73e-01 120 chr2L:11431041-11431161 9.93e-02 63_[+1(1.63e-05)]_49 chrX:865350-865470 3.18e-03 62_[+1(3.30e-05)]_3_[+3(2.64e-05)]_\ 39 chr3R:21545447-21545567 5.45e-01 120 chr3R:28847692-28847812 6.45e-02 61_[+1(5.00e-05)]_51 chr3L:22118409-22118529 2.25e-02 48_[+1(3.30e-05)]_64 chr3R:10540354-10540474 3.32e-02 76_[+1(6.57e-05)]_36 chr2R:15720311-15720431 5.29e-04 25_[+3(2.64e-05)]_44_[+1(5.00e-05)]_\ 35 chr3R:25796002-25796122 5.00e-02 120 chr3L:4082024-4082144 7.59e-01 120 chr2L:19227902-19228022 7.41e-02 60_[+1(1.63e-05)]_52 chr2R:13081453-13081573 1.99e-02 101_[+3(8.22e-05)]_11 chr3L:13194676-13194796 7.85e-04 85_[+1(1.63e-05)]_27 chrX:5541520-5541640 7.56e-02 120 chr3R:15513999-15514119 6.47e-02 92_[+3(2.64e-05)]_20 chr2R:18391657-18391777 2.24e-02 54_[+1(1.63e-05)]_58 chr2R:23584990-23585110 6.12e-01 120 chr3L:22396986-22397106 2.68e-03 46_[+1(1.63e-05)]_66 chrX:21001077-21001197 1.01e-02 5_[+4(4.33e-05)]_107 chr3L:16516906-16517026 1.75e-02 61_[+1(1.63e-05)]_51 chr3L:22349646-22349766 1.51e-01 120 chr3L:5179013-5179133 2.42e-01 120 chr3L:13196724-13196844 3.55e-02 33_[+5(1.50e-05)]_79 chr3R:29378888-29379008 2.14e-02 60_[+1(3.30e-05)]_52 chr2R:12704139-12704259 1.50e-02 79_[+1(1.63e-05)]_33 chrX:1255858-1255978 5.92e-02 120 chr3R:31296193-31296313 9.60e-02 66_[+1(5.00e-05)]_46 chr3L:17987364-17987484 5.87e-02 64_[+1(3.30e-05)]_48 chr3L:18419016-18419136 5.20e-01 120 chr2R:15843724-15843844 2.99e-01 120 chr2R:7996545-7996665 4.30e-01 120 chr2R:6587167-6587287 3.35e-01 120 chr3L:21211745-21211865 2.56e-02 50_[+1(3.30e-05)]_62 chr3L:22248213-22248333 1.20e-01 120 chrX:20726584-20726704 1.79e-01 60_[+1(6.57e-05)]_52 chr3L:12639414-12639534 2.88e-01 25_[+3(8.22e-05)]_87 chr3L:12314140-12314260 6.87e-01 120 chr3L:5986680-5986800 7.63e-03 27_[+4(7.84e-05)]_7_[+1(9.89e-05)]_\ 70 chr2R:22283029-22283149 1.95e-01 120 chr2R:19803238-19803358 9.06e-03 120 chr3R:10419613-10419733 5.96e-03 43_[+4(7.84e-05)]_[+1(6.57e-05)]_61 chrX:4388021-4388141 5.77e-01 120 chrX:18532764-18532884 7.90e-05 10_[+1(5.00e-05)]_25_[+2(4.37e-05)]_\ [+2(4.37e-05)]_[+2(4.37e-05)]_53 chr3R:7137036-7137156 3.46e-02 21_[+1(1.63e-05)]_91 chrX:4215520-4215640 7.08e-03 56_[+3(2.64e-05)]_6_[+1(3.30e-05)]_\ 42 chr3L:11738886-11739006 8.66e-02 59_[+1(3.30e-05)]_53 chr3R:6464461-6464581 3.27e-02 5_[+1(1.63e-05)]_107 chr3L:6036680-6036800 4.27e-03 35_[+3(8.22e-05)]_19_[+1(1.63e-05)]_\ 50 chr2R:20413429-20413549 1.01e-02 103_[+3(5.39e-05)]_9 chr3R:20987648-20987768 1.38e-03 16_[+3(5.39e-05)]_80_[+4(1.03e-05)]_\ 8 chr3L:18325478-18325598 2.38e-02 78_[+1(1.63e-05)]_34 chr3L:8219104-8219224 5.74e-02 85_[+1(3.30e-05)]_27 chr3L:21873375-21873495 2.58e-01 120 chr3R:10371185-10371305 3.95e-03 53_[+4(4.33e-05)]_59 chr2L:6828899-6829019 6.48e-01 120 chr2R:20929066-20929186 1.73e-03 73_[+1(5.00e-05)]_7_[+4(4.33e-05)]_\ 24 chr3R:21517414-21517534 1.69e-01 120 chr3R:22191460-22191580 6.59e-02 120 chr3R:17707801-17707921 3.67e-01 120 chr2L:499332-499452 2.85e-01 54_[+1(8.22e-05)]_58 chr3R:4913784-4913904 4.24e-03 120 chrX:14955623-14955743 1.41e-01 120 chr3L:6106039-6106159 7.83e-01 120 chr2R:8000441-8000561 2.22e-01 88_[+1(8.22e-05)]_24 chr3L:6099365-6099485 4.46e-02 120 chr2L:1120341-1120461 1.49e-02 76_[+4(1.03e-05)]_36 chrX:598797-598917 4.39e-02 45_[+3(2.64e-05)]_67 chr3L:5988137-5988257 1.04e-03 19_[+5(5.88e-05)]_93 chr3L:8543629-8543749 1.11e-02 105_[+2(4.37e-05)]_7 chrX:10533986-10534106 4.58e-02 41_[+1(1.63e-05)]_71 chrX:20279236-20279356 4.48e-01 120 chrX:21484118-21484238 1.43e-01 56_[+2(4.37e-05)]_56 chrX:17413686-17413806 3.05e-03 73_[+5(1.50e-05)]_39 chr3R:30904130-30904250 4.72e-03 54_[+1(1.63e-05)]_58 chr3L:12729756-12729876 2.88e-01 120 chr3L:21590121-21590241 7.07e-02 120 chr2R:12699209-12699329 8.24e-03 11_[+1(3.30e-05)]_101 chr3R:22261586-22261706 2.55e-01 120 chr3L:810384-810504 9.39e-03 2_[+1(5.00e-05)]_110 chr2L:5082723-5082843 3.30e-01 120 chr3L:3566890-3567010 6.36e-02 62_[+1(1.63e-05)]_50 chr3L:14570277-14570397 9.51e-01 120 chr3L:11869144-11869264 3.50e-02 71_[+3(2.64e-05)]_41 chrX:602108-602228 1.29e-05 53_[+4(7.84e-05)]_3_[+2(1.45e-05)]_\ 48 chr2R:14017702-14017822 1.69e-03 39_[+1(5.00e-05)]_73 chr2L:4132414-4132534 9.45e-02 31_[+1(6.57e-05)]_81 chr2L:12868144-12868264 3.44e-01 120 chrX:8769296-8769416 4.12e-01 120 chr3L:6881529-6881649 4.13e-01 120 chr2L:8788413-8788533 9.94e-01 120 chr2R:15066497-15066617 3.44e-02 29_[+2(5.82e-05)]_83 chr3R:16564914-16565034 1.04e-03 3_[+4(4.33e-05)]_46_[+1(5.00e-05)]_\ 55 chr3L:1005998-1006118 4.05e-01 120 chr3L:905534-905654 3.08e-02 102_[+4(7.84e-05)]_10 chr2L:21876166-21876286 3.23e-01 120 chr2L:15371376-15371496 3.54e-02 24_[+1(6.57e-05)]_88 chr3R:22880143-22880263 8.71e-02 24_[+1(6.57e-05)]_88 chr3L:14589470-14589590 1.81e-02 59_[+1(1.63e-05)]_53 chr3R:4886552-4886672 1.65e-02 84_[+1(8.22e-05)]_28 chr3R:5506306-5506426 4.97e-01 120 chr3R:28593834-28593954 5.98e-01 120 chr2L:10569671-10569791 2.10e-02 52_[+1(1.63e-05)]_60 chrX:2684065-2684185 1.97e-03 35_[+2(1.45e-05)]_65_[+1(8.22e-05)]_\ 4 chrX:15364092-15364212 2.01e-02 72_[+2(4.37e-05)]_40 chr2R:20893199-20893319 3.33e-02 28_[+1(1.63e-05)]_84 chrX:14296702-14296822 2.64e-01 64_[+1(5.00e-05)]_[+1(5.00e-05)]_40 chr3R:10700763-10700883 2.36e-01 120 chr2L:19104522-19104642 1.44e-01 26_[+1(8.22e-05)]_86 chr3L:15662661-15662781 1.99e-02 22_[+1(5.00e-05)]_90 chrX:9709759-9709879 7.26e-03 30_[+1(6.57e-05)]_82 chr3R:5571898-5572018 7.97e-01 120 chr2L:7569578-7569698 5.55e-02 120 chr2R:18854494-18854614 4.02e-01 120 chr3R:19684248-19684368 9.78e-02 91_[+1(1.63e-05)]_21 chr2L:19091126-19091246 5.82e-01 120 chr3L:808864-808984 1.28e-02 94_[+1(6.57e-05)]_18 chrX:1897871-1897991 6.95e-02 95_[+1(5.00e-05)]_17 chr2L:11295894-11296014 4.18e-01 120 chr2L:8743240-8743360 1.70e-02 14_[+1(6.57e-05)]_5_[+1(9.89e-05)]_\ 85 chr2L:13706804-13706924 3.75e-02 53_[+2(4.37e-05)]_59 chr2R:5819846-5819966 3.55e-01 120 chrX:19446530-19446650 6.39e-03 41_[+1(5.00e-05)]_56_[+4(1.03e-05)]_\ 7 chr3R:5099137-5099257 7.79e-04 60_[+1(3.30e-05)]_52 chrX:8628776-8628896 9.43e-01 120 chr2L:19021424-19021544 8.90e-01 120 chr2L:13051300-13051420 1.03e-01 16_[+1(5.00e-05)]_96 chr3L:13645435-13645555 1.16e-02 59_[+2(7.40e-05)]_53 chr3R:9133362-9133482 1.03e-02 76_[+2(4.37e-05)]_[+2(4.37e-05)]_28 chr3R:18203411-18203531 1.34e-01 120 chr2L:1308063-1308183 1.87e-02 68_[+1(3.30e-05)]_44 chr2L:2397021-2397141 7.92e-01 120 chr3L:18447197-18447317 4.34e-03 52_[+1(1.63e-05)]_6_[+1(3.30e-05)]_\ 46 chr3R:19069403-19069523 6.34e-01 120 chr3L:14569673-14569793 3.56e-01 120 chr3R:23828911-23829031 3.13e-01 120 chr3L:22312594-22312714 6.83e-01 120 chr3R:28576966-28577086 8.83e-03 20_[+4(4.33e-05)]_73_[+1(9.89e-05)]_\ 11 chr3R:8227057-8227177 3.27e-01 120 chr2R:19785436-19785556 2.33e-01 55_[+1(3.30e-05)]_57 chr3L:18411450-18411570 4.78e-03 41_[+1(1.63e-05)]_71 chrX:10263274-10263394 9.28e-02 120 chr2R:23830809-23830929 7.16e-04 59_[+1(3.30e-05)]_53 chr3L:1212744-1212864 5.97e-01 120 chrX:12344826-12344946 1.99e-01 26_[+1(1.63e-05)]_86 chr3R:19985449-19985569 1.75e-01 120 chr2L:19807139-19807259 9.85e-03 83_[+3(5.39e-05)]_29 chr3R:27440034-27440154 1.88e-02 50_[+1(6.57e-05)]_62 chr2L:6234297-6234417 6.97e-03 8_[+4(4.33e-05)]_64_[+3(5.39e-05)]_\ 32 chr2R:16055046-16055166 1.61e-01 120 chr3R:30600112-30600232 7.36e-02 120 chr2R:15051513-15051633 1.30e-01 55_[+1(8.22e-05)]_57 chr3L:1931455-1931575 2.78e-02 58_[+1(3.30e-05)]_54 chr2R:22524689-22524809 1.69e-02 120 chr3R:31014574-31014694 3.30e-01 120 chrX:13815072-13815192 4.05e-01 120 chrX:20730707-20730827 8.50e-04 7_[+5(1.50e-05)]_105 chr3L:13155408-13155528 2.46e-01 120 chr2R:22863097-22863217 6.90e-03 30_[+5(1.50e-05)]_53_[+1(8.22e-05)]_\ 21 chr2L:1788098-1788218 8.64e-06 41_[+1(5.00e-05)]_18_[+5(1.50e-05)]_\ 12_[+3(2.64e-05)]_25 chrX:17786504-17786624 1.62e-03 65_[+1(1.63e-05)]_14_[+4(7.84e-05)]_\ 25 chr3L:22527409-22527529 3.83e-02 120 chr2R:16395960-16396080 2.38e-01 45_[+4(7.84e-05)]_67 chr3L:6019218-6019338 1.59e-02 5_[+5(5.88e-05)]_2_[+5(1.50e-05)]_\ 97 chr2L:5927509-5927629 1.04e-01 120 chr2L:18978868-18978988 2.88e-02 110_[+2(4.37e-05)]_2 chr2L:10550466-10550586 1.18e-02 53_[+1(6.57e-05)]_59 chr2L:19802050-19802170 9.61e-02 40_[+1(1.63e-05)]_72 chrX:15363484-15363604 5.90e-02 120 chr3R:26935538-26935658 1.36e-03 64_[+1(1.63e-05)]_12_[+4(7.84e-05)]_\ 28 chr3R:26123455-26123575 2.48e-01 120 chr2L:9443230-9443350 2.19e-01 120 chr2L:6630339-6630459 1.56e-01 43_[+1(6.57e-05)]_69 chrX:8634705-8634825 2.73e-02 120 chrX:1423523-1423643 2.22e-01 120 chr2L:3307519-3307639 2.75e-01 120 chr2R:5820527-5820647 1.25e-01 21_[+2(4.37e-05)]_91 chr2R:12699420-12699540 8.83e-01 120 chr3L:11361635-11361755 7.49e-05 1_[+2(4.37e-05)]_63_[+4(4.33e-05)]_\ 8_[+1(3.30e-05)]_24 chr2R:22374420-22374540 5.12e-03 104_[+2(4.37e-05)]_8 chr3R:15532168-15532288 2.89e-02 103_[+1(5.00e-05)]_9 chr2R:21032862-21032982 1.56e-01 87_[+5(3.02e-05)]_25 chr2R:12907992-12908112 3.88e-02 99_[+3(2.64e-05)]_13 chr3L:7474907-7475027 1.61e-02 39_[+1(5.00e-05)]_73 chr3L:22526003-22526123 4.88e-01 120 chr3L:2846736-2846856 7.27e-03 100_[+4(4.33e-05)]_12 chr2R:15336994-15337114 2.35e-04 19_[+3(5.39e-05)]_25_[+1(3.30e-05)]_\ 60 chrX:12266125-12266245 2.82e-02 19_[+4(7.84e-05)]_93 chr2L:6319155-6319275 1.30e-01 120 chr3R:15072328-15072448 4.85e-06 14_[+3(5.39e-05)]_8_[+2(4.37e-05)]_\ 19_[+1(3.30e-05)]_55 chr3R:4855990-4856110 1.45e-02 59_[+1(1.63e-05)]_53 chrX:1814813-1814933 7.02e-03 91_[+5(3.02e-05)]_11_[+5(3.02e-05)]_\ 2 chr2L:6316966-6317086 6.57e-03 1_[+1(8.22e-05)]_111 chr3L:8948188-8948308 2.80e-01 120 chr3L:12648580-12648700 1.52e-02 85_[+1(1.63e-05)]_27 chr2R:19421997-19422117 5.63e-01 120 chr3L:15720297-15720417 1.68e-01 29_[+1(8.22e-05)]_83 chr2R:18376164-18376284 2.63e-01 120 chr2L:19221658-19221778 2.42e-02 120 chr2L:6207794-6207914 5.73e-02 11_[+3(5.39e-05)]_101 chr2L:19087469-19087589 2.49e-01 120 chr3L:2191633-2191753 9.67e-01 120 chr3R:27007166-27007286 4.76e-02 120 chr2R:16369235-16369355 3.58e-02 70_[+1(3.30e-05)]_42 chr2R:8015201-8015321 9.27e-02 49_[+1(5.00e-05)]_63 chr2L:14889819-14889939 5.36e-03 51_[+3(2.64e-05)]_10_[+1(3.30e-05)]_\ 43 chr2L:2639584-2639704 1.90e-02 120 chr3L:18448128-18448248 1.24e-03 76_[+4(9.09e-05)]_6_[+1(6.57e-05)]_\ 22 chr3R:23826018-23826138 1.26e-01 120 chr2L:15454167-15454287 4.14e-02 71_[+1(1.63e-05)]_41 chr3R:29707415-29707535 1.75e-02 98_[+1(3.30e-05)]_14 chr2R:21788658-21788778 6.73e-03 22_[+2(4.37e-05)]_90 chrX:4194655-4194775 2.35e-02 92_[+3(2.64e-05)]_20 chr2L:3278933-3279053 8.47e-02 120 chr2L:19773542-19773662 2.80e-01 120 chr3R:15411290-15411410 3.43e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n05.farnam.hpc.yale.internal ********************************************************************************