******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/Esplmγ-HLH.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2R:2567084-2567204 1.0000 120 chr3R:16573919-16574039 1.0000 120 chr3L:2411038-2411158 1.0000 120 chr3L:9614094-9614214 1.0000 120 chr3R:10636129-10636249 1.0000 120 chr2L:8611008-8611128 1.0000 120 chr3L:1880819-1880939 1.0000 120 chr3L:2572132-2572252 1.0000 120 chr3R:16558924-16559044 1.0000 120 chr3R:22108464-22108584 1.0000 120 chrX:5973499-5973619 1.0000 120 chrX:6179529-6179649 1.0000 120 chrX:13137158-13137278 1.0000 120 chr2R:22450451-22450571 1.0000 120 chr2R:23202124-23202244 1.0000 120 chrX:771819-771939 1.0000 120 chr2R:21895033-21895153 1.0000 120 chr3R:26280497-26280617 1.0000 120 chrX:4262798-4262918 1.0000 120 chr2L:5771297-5771417 1.0000 120 chr3R:8920186-8920306 1.0000 120 chr3R:8354524-8354644 1.0000 120 chr3R:26006041-26006161 1.0000 120 chr2R:14726132-14726252 1.0000 120 chr3L:2533824-2533944 1.0000 120 chrX:12221673-12221793 1.0000 120 chr2L:14094770-14094890 1.0000 120 chr2R:20906647-20906767 1.0000 120 chr2R:14137011-14137131 1.0000 120 chr3L:3288561-3288681 1.0000 120 chrX:13434188-13434308 1.0000 120 chrX:5972167-5972287 1.0000 120 chr2L:18505651-18505771 1.0000 120 chr3R:31709314-31709434 1.0000 120 chr2R:11738644-11738764 1.0000 120 chr3R:31060357-31060477 1.0000 120 chr3L:16385982-16386102 1.0000 120 chr3L:6220370-6220490 1.0000 120 chr3R:23921827-23921947 1.0000 120 chr3R:26242568-26242688 1.0000 120 chr3R:14077184-14077304 1.0000 120 chrX:9119362-9119482 1.0000 120 chr2L:2729985-2730105 1.0000 120 chr2L:2731485-2731605 1.0000 120 chrX:10601737-10601857 1.0000 120 chr3R:10648917-10649037 1.0000 120 chr3R:28677008-28677128 1.0000 120 chrX:12454511-12454631 1.0000 120 chr3L:15234647-15234767 1.0000 120 chrX:1880396-1880516 1.0000 120 chr2L:10468557-10468677 1.0000 120 chr2L:19930215-19930335 1.0000 120 chrX:10067645-10067765 1.0000 120 chrX:2861065-2861185 1.0000 120 chrX:10387794-10387914 1.0000 120 chr2L:1427914-1428034 1.0000 120 chrX:9352826-9352946 1.0000 120 chr3R:25004908-25005028 1.0000 120 chr3R:8811029-8811149 1.0000 120 chr3L:10745718-10745838 1.0000 120 chr3R:10888650-10888770 1.0000 120 chrX:2708316-2708436 1.0000 120 chr3L:8029523-8029643 1.0000 120 chr2L:9911919-9912039 1.0000 120 chr3R:19627844-19627964 1.0000 120 chr2L:7635336-7635456 1.0000 120 chr2L:20734311-20734431 1.0000 120 chr3R:29089855-29089975 1.0000 120 chr3L:1216599-1216719 1.0000 120 chr2L:7266108-7266228 1.0000 120 chrX:11653151-11653271 1.0000 120 chr2R:24132858-24132978 1.0000 120 chr3L:16760406-16760526 1.0000 120 chr3R:26900144-26900264 1.0000 120 chr3L:5554546-5554666 1.0000 120 chr3R:13999709-13999829 1.0000 120 chr2L:19285652-19285772 1.0000 120 chr2R:7077054-7077174 1.0000 120 chrX:11341085-11341205 1.0000 120 chr2R:23176749-23176869 1.0000 120 chr3R:27557144-27557264 1.0000 120 chr3L:8419147-8419267 1.0000 120 chr3L:4603587-4603707 1.0000 120 chrX:8273868-8273988 1.0000 120 chr3R:18315358-18315478 1.0000 120 chr3L:14335993-14336113 1.0000 120 chrX:618761-618881 1.0000 120 chrX:1083261-1083381 1.0000 120 chrX:14213694-14213814 1.0000 120 chr2L:10428669-10428789 1.0000 120 chrX:10600642-10600762 1.0000 120 chr3L:4607841-4607961 1.0000 120 chr2L:18328900-18329020 1.0000 120 chr3L:11334161-11334281 1.0000 120 chrX:2158998-2159118 1.0000 120 chr3L:20630806-20630926 1.0000 120 chrX:2166262-2166382 1.0000 120 chr2R:14913201-14913321 1.0000 120 chr3L:1578716-1578836 1.0000 120 chr2L:1486106-1486226 1.0000 120 chr2L:8528472-8528592 1.0000 120 chr2R:11178544-11178664 1.0000 120 chr2L:20881472-20881592 1.0000 120 chr2R:18451152-18451272 1.0000 120 chr3L:13929314-13929434 1.0000 120 chr3R:20008804-20008924 1.0000 120 chr3R:29869219-29869339 1.0000 120 chr3L:630221-630341 1.0000 120 chr2L:3598617-3598737 1.0000 120 chr2L:1428490-1428610 1.0000 120 chr3R:25490371-25490491 1.0000 120 chr3R:10628440-10628560 1.0000 120 chr3R:21612998-21613118 1.0000 120 chr3R:30413935-30414055 1.0000 120 chr3R:27677207-27677327 1.0000 120 chr3L:18349412-18349532 1.0000 120 chr3L:10866752-10866872 1.0000 120 chr2R:25085527-25085647 1.0000 120 chr3R:8984755-8984875 1.0000 120 chr3L:13411149-13411269 1.0000 120 chr3R:19113978-19114098 1.0000 120 chrX:12925973-12926093 1.0000 120 chrX:3690736-3690856 1.0000 120 chr2R:20177356-20177476 1.0000 120 chr3R:22664441-22664561 1.0000 120 chr3R:22121364-22121484 1.0000 120 chr3L:627869-627989 1.0000 120 chrX:3381148-3381268 1.0000 120 chr3R:18215437-18215557 1.0000 120 chr3L:12336390-12336510 1.0000 120 chr2L:5520084-5520204 1.0000 120 chr3L:15235295-15235415 1.0000 120 chr3L:8951134-8951254 1.0000 120 chr2L:19517456-19517576 1.0000 120 chr2R:8914073-8914193 1.0000 120 chr3R:27937905-27938025 1.0000 120 chr2L:4847312-4847432 1.0000 120 chr3R:30195729-30195849 1.0000 120 chr2L:15629925-15630045 1.0000 120 chr3L:2372002-2372122 1.0000 120 chr3L:15691228-15691348 1.0000 120 chrX:6695029-6695149 1.0000 120 chr2R:18277212-18277332 1.0000 120 chr2R:13055023-13055143 1.0000 120 chr2R:18834747-18834867 1.0000 120 chrX:9356466-9356586 1.0000 120 chr2L:1629721-1629841 1.0000 120 chr3R:14741476-14741596 1.0000 120 chr3R:26105932-26106052 1.0000 120 chrX:9652137-9652257 1.0000 120 chr3R:28631941-28632061 1.0000 120 chr3L:5988861-5988981 1.0000 120 chr2R:21018447-21018567 1.0000 120 chr3L:13450260-13450380 1.0000 120 chr2L:3472405-3472525 1.0000 120 chr2L:10698103-10698223 1.0000 120 chr2L:7957151-7957271 1.0000 120 chr3R:10564396-10564516 1.0000 120 chr3R:29997725-29997845 1.0000 120 chrX:18635407-18635527 1.0000 120 chr3R:12350616-12350736 1.0000 120 chr3L:15563049-15563169 1.0000 120 chr3R:8563974-8564094 1.0000 120 chr3R:23028657-23028777 1.0000 120 chr2L:3444935-3445055 1.0000 120 chr2R:13429170-13429290 1.0000 120 chr2R:11435172-11435292 1.0000 120 chr3L:20771159-20771279 1.0000 120 chr2L:18688818-18688938 1.0000 120 chr3R:9986065-9986185 1.0000 120 chr2R:13999267-13999387 1.0000 120 chr2R:22548203-22548323 1.0000 120 chr2R:19968130-19968250 1.0000 120 chr3R:20989836-20989956 1.0000 120 chr3R:15792564-15792684 1.0000 120 chr3L:14999699-14999819 1.0000 120 chr2L:21787100-21787220 1.0000 120 chr3R:26117722-26117842 1.0000 120 chr2R:23574912-23575032 1.0000 120 chr3L:772293-772413 1.0000 120 chr3R:22236903-22237023 1.0000 120 chr2R:12605710-12605830 1.0000 120 chr3R:11852040-11852160 1.0000 120 chr2R:14618654-14618774 1.0000 120 chr3R:20593026-20593146 1.0000 120 chr3R:21671732-21671852 1.0000 120 chr2R:16094992-16095112 1.0000 120 chrX:4010304-4010424 1.0000 120 chrX:5892146-5892266 1.0000 120 chr2L:15248778-15248898 1.0000 120 chr3L:11074578-11074698 1.0000 120 chr2R:14645115-14645235 1.0000 120 chr2L:1150676-1150796 1.0000 120 chr3R:24010898-24011018 1.0000 120 chr3R:16748677-16748797 1.0000 120 chrX:15615555-15615675 1.0000 120 chr2L:8602803-8602923 1.0000 120 chr3L:6189711-6189831 1.0000 120 chr3L:1376167-1376287 1.0000 120 chr3R:29522287-29522407 1.0000 120 chr2L:20950810-20950930 1.0000 120 chrX:16773046-16773166 1.0000 120 chrX:1052789-1052909 1.0000 120 chrX:2318466-2318586 1.0000 120 chr3L:20194857-20194977 1.0000 120 chr3R:25489231-25489351 1.0000 120 chrX:14839853-14839973 1.0000 120 chr3L:3389799-3389919 1.0000 120 chrX:18869621-18869741 1.0000 120 chrX:19667049-19667169 1.0000 120 chr3R:15837189-15837309 1.0000 120 chr2L:6698532-6698652 1.0000 120 chr2L:7395900-7396020 1.0000 120 chr3L:557419-557539 1.0000 120 chr3L:11149046-11149166 1.0000 120 chr2L:21143015-21143135 1.0000 120 chr3L:11993128-11993248 1.0000 120 chr2L:7033440-7033560 1.0000 120 chr2R:21503212-21503332 1.0000 120 chr2L:13073889-13074009 1.0000 120 chr3R:8033043-8033163 1.0000 120 chrX:4010974-4011094 1.0000 120 chr3R:12017041-12017161 1.0000 120 chrX:2087636-2087756 1.0000 120 chr3L:11534124-11534244 1.0000 120 chrX:12466587-12466707 1.0000 120 chr3R:27273619-27273739 1.0000 120 chr2R:18528488-18528608 1.0000 120 chr2R:19669845-19669965 1.0000 120 chr3L:15311638-15311758 1.0000 120 chrX:1944302-1944422 1.0000 120 chr3L:1029763-1029883 1.0000 120 chr3L:18784710-18784830 1.0000 120 chr3R:30797450-30797570 1.0000 120 chr3L:17242238-17242358 1.0000 120 chr3L:11680449-11680569 1.0000 120 chr3R:5076340-5076460 1.0000 120 chr2R:23554522-23554642 1.0000 120 chrX:6267526-6267646 1.0000 120 chrX:11570410-11570530 1.0000 120 chr3R:19105892-19106012 1.0000 120 chr2R:13990695-13990815 1.0000 120 chr2R:7395955-7396075 1.0000 120 chrX:15599836-15599956 1.0000 120 chr3L:13911746-13911866 1.0000 120 chr2R:14909991-14910111 1.0000 120 chr3L:4239604-4239724 1.0000 120 chr3R:14008968-14009088 1.0000 120 chr3R:23356124-23356244 1.0000 120 chrX:8196995-8197115 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_Esplmγ-HLH/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/Esplmγ-HLH.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.323 C 0.182 G 0.183 T 0.312 Background letter frequencies (from file dataset with add-one prior applied): A 0.323 C 0.182 G 0.183 T 0.312 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF RCASTGDR MEME-1 width = 8 sites = 56 llr = 440 E-value = 3.6e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3:a:::34 pos.-specific C 2a:5::11 probability G 5::5:a45 matrix T ::::a:3: bits 2.5 * * 2.2 * * 2.0 * * 1.7 ** * Relative 1.5 ***** Entropy 1.2 ***** (11.3 bits) 1.0 ***** 0.7 ****** * 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel GCACTGGG consensus A G TA sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:14008968-14009088 20 3.74e-06 TGCTGGCAAT GCACTGGG AGAAATTGCG chr3R:25489231-25489351 41 3.74e-06 GATATCGCAG GCACTGGG AGAAAATGTG chr3R:26280497-26280617 4 3.74e-06 CAT GCACTGGG GAAAAAGGGG chrX:13137158-13137278 3 3.74e-06 TT GCACTGGG CGAAAAAATA chrX:5973499-5973619 31 3.74e-06 CTACATATAT GCACTGGG AGAAATTCGA chr3R:10636129-10636249 18 3.74e-06 TTGGGGTTCT GCACTGGG AATAAAGTTT chr2L:7033440-7033560 49 7.51e-06 GTCGTGTACT GCAGTGGG TGTACAGTGG chr2R:14645115-14645235 27 1.39e-05 GCACACAGGC GCACTGTG GCGTTTTAGC chr3L:15235295-15235415 106 1.39e-05 GGCCCACTGT GCACTGTG GGCCATT chr2L:10428669-10428789 72 1.39e-05 AAAACTTGAA GCACTGTG CCGTTATCAA chr3R:18315358-18315478 20 2.05e-05 GCTTTAATCT GCACTGGA AAAAATCAGC chr2R:21895033-21895153 1 3.35e-05 . GCACTGAG AGAAATAGTT chr3L:1880819-1880939 5 3.35e-05 AGGT GCACTGAG AGAAAGCTAT chr2L:15629925-15630045 4 5.05e-05 TCT GCAGTGGA AGTGTAGAGC chr3L:9614094-9614214 31 5.05e-05 ACTATTGCAA GCAGTGGA TGCAAGCAGT chr3R:26105932-26106052 13 6.75e-05 ATCTGTCAAG ACAGTGGG TCTTCGAGCA chr3L:15234647-15234767 15 6.75e-05 CATAGTGCGC ACAGTGGG CCCAAATCGG chr2L:2729985-2730105 8 6.75e-05 ACTAGGT ACAGTGGG CCCTGCTCGG chrX:19667049-19667169 88 1.23e-04 GCCCCCGCGC GCACTGAA TCCGCTCCTG chr3L:13450260-13450380 53 1.23e-04 CCTTATCAGC GCAGTGTA ATGTGGGGTT chr2L:19517456-19517576 88 1.23e-04 TTGGACAGTT CCACTGTG CGGCGAAGCT chr2L:18328900-18329020 101 1.23e-04 CCAATTTTAT GCAGTGTA CTACTACTGG chr2L:7635336-7635456 97 1.23e-04 CAATTTTCTG GCAGTGTA AATATAGCCA chrX:2708316-2708436 98 1.23e-04 TACGGAGGTC CCACTGTG CTGGGCCGTA chrX:12454511-12454631 112 1.23e-04 ATATTTTAAC CCACTGTG C chr3R:14077184-14077304 76 1.23e-04 AAGGATTGTA GCACTGAA CCTTTTGAGA chr3L:6220370-6220490 112 1.23e-04 CCAATTTGCT CCACTGTG C chr2R:11738644-11738764 2 1.23e-04 T GCACTGAA AGAAAAGGCT chrX:6179529-6179649 11 1.23e-04 GCAAGTATAT GCACTGAA AGAAACAAAC chr2L:8611008-8611128 101 1.23e-04 TATTTTTTGC GCAGTGTA CTGGTGTGTA chr3L:6189711-6189831 36 1.45e-04 ACTGCCTGTC ACACTGGA ACAAATTTGT chr2L:8528472-8528592 77 1.45e-04 CGTCGGACAA GCAGTGCG ACTTGGGATG chr3L:2411038-2411158 93 1.45e-04 TAGATAAATA CCACTGGA ATTACCAATT chr3R:10564396-10564516 51 1.93e-04 GCGAAAAAGC CCAGTGTG ACCATGTAGT chrX:2158998-2159118 96 1.93e-04 CTCCCCTAAG CCAGTGTG ACCATGACCT chrX:2861065-2861185 6 1.93e-04 TGGCC ACACTGAG CGAAATGTAA chrX:13434188-13434308 11 1.93e-04 TCACATACGG ACACTGAG AGAAAACTAG chrX:4010304-4010424 15 2.11e-04 TACAGTGGAT ACAGTGGA GCTCGCTTAA chr2R:20177356-20177476 25 2.11e-04 TCTGCCTCCT ACAGTGGA GCCTCGCAGT chr3R:27937905-27938025 52 2.29e-04 ACCGTAATGC ACAGTGAG GCGAAGTGTT chr3R:26006041-26006161 38 2.29e-04 TGGGAACTGG ACAGTGAG TGCGAGCGGG chr2L:13073889-13074009 18 2.43e-04 TGTGGCCGAT GCACTGCA AGAAAACACG chr3R:22664441-22664561 111 2.43e-04 CACCCTCGCA GCAGTGGC GA chr2L:14094770-14094890 112 2.43e-04 TCAGTGCTAA GCAGTGGC T chrX:3381148-3381268 105 2.75e-04 CCAGTTTATC CCACTGTA TTTTATTT chr3L:1578716-1578836 23 2.75e-04 CTCCTCAGCC ACACTGTA ATTTACAATA chr3L:15563049-15563169 63 2.91e-04 AAATGTGTTT CCACTGCG TTTCAAGCAG chr2L:1629721-1629841 87 2.91e-04 ACGCAAGACA ACACTGCG TATGATTTCT chr3R:29869219-29869339 21 3.55e-04 TAAATTTAAT ACAGTGTA TAAATTTAAA chr3R:13999709-13999829 103 3.55e-04 TCCGTTTCTC CCAGTGTA CTGCACTAAA chrX:4010974-4011094 113 4.04e-04 ATAGCACGAG ACAGTGAA chr2R:21503212-21503332 20 4.04e-04 AGCAGCTGCC ACAGTGAA GCCTGTGTGC chrX:10600642-10600762 14 4.04e-04 GTGCCCTAGT ACAGTGAA GACACGCCAC chrX:5972167-5972287 60 4.04e-04 GTATATGAAA ACAGTGAA ATATTCATTT chr2R:16094992-16095112 26 4.27e-04 ACTTTGCACC ACACTGGC CAAAAAATTG chrX:2087636-2087756 96 4.85e-04 TAGGTCCGCG GCAGCGGG TGCTATTATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:14008968-14009088 3.7e-06 19_[+1]_93 chr3R:25489231-25489351 3.7e-06 40_[+1]_72 chr3R:26280497-26280617 3.7e-06 3_[+1]_109 chrX:13137158-13137278 3.7e-06 2_[+1]_110 chrX:5973499-5973619 3.7e-06 30_[+1]_82 chr3R:10636129-10636249 3.7e-06 17_[+1]_95 chr2L:7033440-7033560 7.5e-06 48_[+1]_64 chr2R:14645115-14645235 1.4e-05 26_[+1]_86 chr3L:15235295-15235415 1.4e-05 105_[+1]_7 chr2L:10428669-10428789 1.4e-05 71_[+1]_41 chr3R:18315358-18315478 2e-05 19_[+1]_93 chr2R:21895033-21895153 3.4e-05 [+1]_112 chr3L:1880819-1880939 3.4e-05 4_[+1]_108 chr2L:15629925-15630045 5e-05 3_[+1]_109 chr3L:9614094-9614214 5e-05 30_[+1]_82 chr3R:26105932-26106052 6.8e-05 12_[+1]_100 chr3L:15234647-15234767 6.8e-05 14_[+1]_98 chr2L:2729985-2730105 6.8e-05 7_[+1]_105 chrX:19667049-19667169 0.00012 87_[+1]_25 chr3L:13450260-13450380 0.00012 52_[+1]_60 chr2L:19517456-19517576 0.00012 87_[+1]_25 chr2L:18328900-18329020 0.00012 100_[+1]_12 chr2L:7635336-7635456 0.00012 96_[+1]_16 chrX:2708316-2708436 0.00012 97_[+1]_15 chrX:12454511-12454631 0.00012 111_[+1]_1 chr3R:14077184-14077304 0.00012 75_[+1]_37 chr3L:6220370-6220490 0.00012 111_[+1]_1 chr2R:11738644-11738764 0.00012 1_[+1]_111 chrX:6179529-6179649 0.00012 10_[+1]_102 chr2L:8611008-8611128 0.00012 100_[+1]_12 chr3L:6189711-6189831 0.00015 35_[+1]_77 chr2L:8528472-8528592 0.00015 76_[+1]_36 chr3L:2411038-2411158 0.00015 92_[+1]_20 chr3R:10564396-10564516 0.00019 50_[+1]_62 chrX:2158998-2159118 0.00019 95_[+1]_17 chrX:2861065-2861185 0.00019 5_[+1]_107 chrX:13434188-13434308 0.00019 10_[+1]_102 chrX:4010304-4010424 0.00021 14_[+1]_98 chr2R:20177356-20177476 0.00021 24_[+1]_88 chr3R:27937905-27938025 0.00023 51_[+1]_61 chr3R:26006041-26006161 0.00023 37_[+1]_75 chr2L:13073889-13074009 0.00024 17_[+1]_95 chr3R:22664441-22664561 0.00024 110_[+1]_2 chr2L:14094770-14094890 0.00024 111_[+1]_1 chrX:3381148-3381268 0.00027 104_[+1]_8 chr3L:1578716-1578836 0.00027 22_[+1]_90 chr3L:15563049-15563169 0.00029 62_[+1]_50 chr2L:1629721-1629841 0.00029 86_[+1]_26 chr3R:29869219-29869339 0.00035 20_[+1]_92 chr3R:13999709-13999829 0.00035 102_[+1]_10 chrX:4010974-4011094 0.0004 112_[+1] chr2R:21503212-21503332 0.0004 19_[+1]_93 chrX:10600642-10600762 0.0004 13_[+1]_99 chrX:5972167-5972287 0.0004 59_[+1]_53 chr2R:16094992-16095112 0.00043 25_[+1]_87 chrX:2087636-2087756 0.00048 95_[+1]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCASTGDR width=8 seqs=56 chr3R:14008968-14009088 ( 20) GCACTGGG 1 chr3R:25489231-25489351 ( 41) GCACTGGG 1 chr3R:26280497-26280617 ( 4) GCACTGGG 1 chrX:13137158-13137278 ( 3) GCACTGGG 1 chrX:5973499-5973619 ( 31) GCACTGGG 1 chr3R:10636129-10636249 ( 18) GCACTGGG 1 chr2L:7033440-7033560 ( 49) GCAGTGGG 1 chr2R:14645115-14645235 ( 27) GCACTGTG 1 chr3L:15235295-15235415 ( 106) GCACTGTG 1 chr2L:10428669-10428789 ( 72) GCACTGTG 1 chr3R:18315358-18315478 ( 20) GCACTGGA 1 chr2R:21895033-21895153 ( 1) GCACTGAG 1 chr3L:1880819-1880939 ( 5) GCACTGAG 1 chr2L:15629925-15630045 ( 4) GCAGTGGA 1 chr3L:9614094-9614214 ( 31) GCAGTGGA 1 chr3R:26105932-26106052 ( 13) ACAGTGGG 1 chr3L:15234647-15234767 ( 15) ACAGTGGG 1 chr2L:2729985-2730105 ( 8) ACAGTGGG 1 chrX:19667049-19667169 ( 88) GCACTGAA 1 chr3L:13450260-13450380 ( 53) GCAGTGTA 1 chr2L:19517456-19517576 ( 88) CCACTGTG 1 chr2L:18328900-18329020 ( 101) GCAGTGTA 1 chr2L:7635336-7635456 ( 97) GCAGTGTA 1 chrX:2708316-2708436 ( 98) CCACTGTG 1 chrX:12454511-12454631 ( 112) CCACTGTG 1 chr3R:14077184-14077304 ( 76) GCACTGAA 1 chr3L:6220370-6220490 ( 112) CCACTGTG 1 chr2R:11738644-11738764 ( 2) GCACTGAA 1 chrX:6179529-6179649 ( 11) GCACTGAA 1 chr2L:8611008-8611128 ( 101) GCAGTGTA 1 chr3L:6189711-6189831 ( 36) ACACTGGA 1 chr2L:8528472-8528592 ( 77) GCAGTGCG 1 chr3L:2411038-2411158 ( 93) CCACTGGA 1 chr3R:10564396-10564516 ( 51) CCAGTGTG 1 chrX:2158998-2159118 ( 96) CCAGTGTG 1 chrX:2861065-2861185 ( 6) ACACTGAG 1 chrX:13434188-13434308 ( 11) ACACTGAG 1 chrX:4010304-4010424 ( 15) ACAGTGGA 1 chr2R:20177356-20177476 ( 25) ACAGTGGA 1 chr3R:27937905-27938025 ( 52) ACAGTGAG 1 chr3R:26006041-26006161 ( 38) ACAGTGAG 1 chr2L:13073889-13074009 ( 18) GCACTGCA 1 chr3R:22664441-22664561 ( 111) GCAGTGGC 1 chr2L:14094770-14094890 ( 112) GCAGTGGC 1 chrX:3381148-3381268 ( 105) CCACTGTA 1 chr3L:1578716-1578836 ( 23) ACACTGTA 1 chr3L:15563049-15563169 ( 63) CCACTGCG 1 chr2L:1629721-1629841 ( 87) ACACTGCG 1 chr3R:29869219-29869339 ( 21) ACAGTGTA 1 chr3R:13999709-13999829 ( 103) CCAGTGTA 1 chrX:4010974-4011094 ( 113) ACAGTGAA 1 chr2R:21503212-21503332 ( 20) ACAGTGAA 1 chrX:10600642-10600762 ( 14) ACAGTGAA 1 chrX:5972167-5972287 ( 60) ACAGTGAA 1 chr2R:16094992-16095112 ( 26) ACACTGGC 1 chrX:2087636-2087756 ( 96) GCAGCGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.1998 E= 3.6e-001 -1 -3 145 -1245 -1245 246 -1245 -1245 163 -1245 -1245 -1245 -1245 156 134 -1245 -1245 -335 -1245 165 -1245 -1245 245 -1245 -37 -135 103 -4 41 -176 150 -1245 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 56 E= 3.6e-001 0.321429 0.178571 0.500000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.535714 0.464286 0.000000 0.000000 0.017857 0.000000 0.982143 0.000000 0.000000 1.000000 0.000000 0.250000 0.071429 0.375000 0.303571 0.428571 0.053571 0.517857 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCASTGDR MEME-1 regular expression -------------------------------------------------------------------------------- [GA]CA[CG]TG[GTA][GA] -------------------------------------------------------------------------------- Time 9.96 secs. ******************************************************************************** ******************************************************************************** MOTIF RGTRGCGC MEME-2 width = 8 sites = 21 llr = 195 E-value = 9.2e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 43:3:::: pos.-specific C ::2::8:a probability G 57:7a2a: matrix T 1:8::::: bits 2.5 * ** 2.2 * ** 2.0 * ** 1.7 **** Relative 1.5 **** Entropy 1.2 * ***** (13.4 bits) 1.0 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGTGGCGC consensus AACA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:18635407-18635527 88 2.12e-06 TTCTCTCCTA GGTGGCGC TTTATTACTA chr3R:30797450-30797570 6 7.10e-06 GTTTT AGTGGCGC taaaagcaaa chr2L:1427914-1428034 5 7.10e-06 CGAA AGTGGCGC AAACAATGTC chr2L:2729985-2730105 34 7.10e-06 GGCGCGATAC AGTGGCGC GTGTATCTAT chr2L:1150676-1150796 25 1.30e-05 TTTGCAGTAG GGTAGCGC AATAAACTTA chr2R:7395955-7396075 50 1.89e-05 AAAAAAGTAA GGTGGGGC TGCGAACCAA chr3R:16748677-16748797 55 1.89e-05 CGAATCCATA GATGGCGC ATGCAACTCA chr2L:3472405-3472525 59 1.89e-05 TGCCTGTGCA GATGGCGC CACCATGACG chr3L:3288561-3288681 79 1.89e-05 AAGCTGTGTA GATGGCGC TGCTGAGTTC chr2R:20906647-20906767 107 1.89e-05 ACCAACGGTA GATGGCGC CAGTGC chrX:2158998-2159118 39 2.25e-05 TATCGAAACG TGTGGCGC AAAATTAAGC chr3R:27273619-27273739 75 2.47e-05 ACTAAACAAC GGCAGCGC CAGCAGCTAG chr3L:557419-557539 54 3.47e-05 ATTTGACGAC GACGGCGC CAAACTTCTC chr3L:5554546-5554666 74 3.47e-05 AATGAAATAG AGTAGCGC CCAAATGATA chr3R:14741476-14741596 1 4.51e-05 . AATGGCGC TTCCGCTGTC chrX:8273868-8273988 54 4.51e-05 GTGCCAACCG AGTGGGGC GCTAAAAATA chr2R:24132858-24132978 82 5.11e-05 ACTAGCTCGC AGCAGCGC ACGTGATACC chr2L:5771297-5771417 44 5.11e-05 GTAGTTCTAC AGCAGCGC CCTCTCACAG chr3R:10888650-10888770 94 7.76e-05 TGGTAACAAG TGTAGCGC AAACACTTAA chr2L:1428490-1428610 112 8.77e-05 TGATATCCCC TGTGGGGC G chr2L:7033440-7033560 81 9.37e-05 CAAAATATTT GGCAGGGC TGCAATAGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:18635407-18635527 2.1e-06 87_[+2]_25 chr3R:30797450-30797570 7.1e-06 5_[+2]_107 chr2L:1427914-1428034 7.1e-06 4_[+2]_108 chr2L:2729985-2730105 7.1e-06 33_[+2]_79 chr2L:1150676-1150796 1.3e-05 24_[+2]_88 chr2R:7395955-7396075 1.9e-05 49_[+2]_63 chr3R:16748677-16748797 1.9e-05 54_[+2]_58 chr2L:3472405-3472525 1.9e-05 58_[+2]_54 chr3L:3288561-3288681 1.9e-05 78_[+2]_34 chr2R:20906647-20906767 1.9e-05 106_[+2]_6 chrX:2158998-2159118 2.3e-05 38_[+2]_74 chr3R:27273619-27273739 2.5e-05 74_[+2]_38 chr3L:557419-557539 3.5e-05 53_[+2]_59 chr3L:5554546-5554666 3.5e-05 73_[+2]_39 chr3R:14741476-14741596 4.5e-05 [+2]_112 chrX:8273868-8273988 4.5e-05 53_[+2]_59 chr2R:24132858-24132978 5.1e-05 81_[+2]_31 chr2L:5771297-5771417 5.1e-05 43_[+2]_69 chr3R:10888650-10888770 7.8e-05 93_[+2]_19 chr2L:1428490-1428610 8.8e-05 111_[+2]_1 chr2L:7033440-7033560 9.4e-05 80_[+2]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RGTRGCGC width=8 seqs=21 chrX:18635407-18635527 ( 88) GGTGGCGC 1 chr3R:30797450-30797570 ( 6) AGTGGCGC 1 chr2L:1427914-1428034 ( 5) AGTGGCGC 1 chr2L:2729985-2730105 ( 34) AGTGGCGC 1 chr2L:1150676-1150796 ( 25) GGTAGCGC 1 chr2R:7395955-7396075 ( 50) GGTGGGGC 1 chr3R:16748677-16748797 ( 55) GATGGCGC 1 chr2L:3472405-3472525 ( 59) GATGGCGC 1 chr3L:3288561-3288681 ( 79) GATGGCGC 1 chr2R:20906647-20906767 ( 107) GATGGCGC 1 chrX:2158998-2159118 ( 39) TGTGGCGC 1 chr3R:27273619-27273739 ( 75) GGCAGCGC 1 chr3L:557419-557539 ( 54) GACGGCGC 1 chr3L:5554546-5554666 ( 74) AGTAGCGC 1 chr3R:14741476-14741596 ( 1) AATGGCGC 1 chrX:8273868-8273988 ( 54) AGTGGGGC 1 chr2R:24132858-24132978 ( 82) AGCAGCGC 1 chr2L:5771297-5771417 ( 44) AGCAGCGC 1 chr3R:10888650-10888770 ( 94) TGTAGCGC 1 chr2L:1428490-1428610 ( 112) TGTGGGGC 1 chr2L:7033440-7033560 ( 81) GGCAGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.3794 E= 9.2e+003 24 -1104 138 -113 -18 -1104 196 -1104 -1104 39 -1104 129 5 -1104 186 -1104 -1104 -1104 245 -1104 -1104 215 6 -1104 -1104 -1104 245 -1104 -1104 246 -1104 -1104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 21 E= 9.2e+003 0.380952 0.000000 0.476190 0.142857 0.285714 0.000000 0.714286 0.000000 0.000000 0.238095 0.000000 0.761905 0.333333 0.000000 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.809524 0.190476 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGTRGCGC MEME-2 regular expression -------------------------------------------------------------------------------- [GA][GA][TC][GA]GCGC -------------------------------------------------------------------------------- Time 16.20 secs. ******************************************************************************** ******************************************************************************** MOTIF CGGGCGGC MEME-3 width = 8 sites = 2 llr = 27 E-value = 9.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C a:::a::a probability G :aaa:aa: matrix T :::::::: bits 2.5 ******** 2.2 ******** 2.0 ******** 1.7 ******** Relative 1.5 ******** Entropy 1.2 ******** (19.6 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGGGCGGC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:7395955-7396075 6 1.24e-06 ACCAT CGGGCGGC GAAAATGTGC chr3L:18784710-18784830 50 1.24e-06 atttttcata cgggcggc cacccctttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:7395955-7396075 1.2e-06 5_[+3]_107 chr3L:18784710-18784830 1.2e-06 49_[+3]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGGGCGGC width=8 seqs=2 chr2R:7395955-7396075 ( 6) CGGGCGGC 1 chr3L:18784710-18784830 ( 50) CGGGCGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.7859 E= 9.5e+003 -765 245 -765 -765 -765 -765 244 -765 -765 -765 244 -765 -765 -765 244 -765 -765 245 -765 -765 -765 -765 244 -765 -765 -765 244 -765 -765 245 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 9.5e+003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGGCGGC MEME-3 regular expression -------------------------------------------------------------------------------- CGGGCGGC -------------------------------------------------------------------------------- Time 22.35 secs. ******************************************************************************** ******************************************************************************** MOTIF CGCCCCTG MEME-4 width = 8 sites = 2 llr = 26 E-value = 1.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C a:aaaa:: probability G :a:::::a matrix T ::::::a: bits 2.5 ****** * 2.2 ****** * 2.0 ****** * 1.7 ******** Relative 1.5 ******** Entropy 1.2 ******** (18.9 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGCCCCTG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:15792564-15792684 110 2.09e-06 TTCTACTGAA CGCCCCTG GTT chr3L:5554546-5554666 101 2.09e-06 ATCTTGAGTC CGCCCCTG TTCGCCGCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:15792564-15792684 2.1e-06 109_[+4]_3 chr3L:5554546-5554666 2.1e-06 100_[+4]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGCCCCTG width=8 seqs=2 chr3R:15792564-15792684 ( 110) CGCCCCTG 1 chr3L:5554546-5554666 ( 101) CGCCCCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.7859 E= 1.1e+004 -765 245 -765 -765 -765 -765 244 -765 -765 245 -765 -765 -765 245 -765 -765 -765 245 -765 -765 -765 245 -765 -765 -765 -765 -765 167 -765 -765 244 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.1e+004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCTG MEME-4 regular expression -------------------------------------------------------------------------------- CGCCCCTG -------------------------------------------------------------------------------- Time 28.54 secs. ******************************************************************************** ******************************************************************************** MOTIF CCACCGCC MEME-5 width = 8 sites = 2 llr = 26 E-value = 1.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::a::::: pos.-specific C aa:aa:aa probability G :::::a:: matrix T :::::::: bits 2.5 ** ***** 2.2 ** ***** 2.0 ** ***** 1.7 ******** Relative 1.5 ******** Entropy 1.2 ******** (18.8 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCACCGCC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:8984755-8984875 110 2.15e-06 TTTGGAACAA CCACCGCC GCC chr3R:8920186-8920306 12 2.15e-06 GGGGACACAC CCACCGCC CCCATTTGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:8984755-8984875 2.1e-06 109_[+5]_3 chr3R:8920186-8920306 2.1e-06 11_[+5]_101 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCACCGCC width=8 seqs=2 chr3R:8984755-8984875 ( 110) CCACCGCC 1 chr3R:8920186-8920306 ( 12) CCACCGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.7859 E= 1.1e+004 -765 245 -765 -765 -765 245 -765 -765 163 -765 -765 -765 -765 245 -765 -765 -765 245 -765 -765 -765 -765 244 -765 -765 245 -765 -765 -765 245 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.1e+004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACCGCC MEME-5 regular expression -------------------------------------------------------------------------------- CCACCGCC -------------------------------------------------------------------------------- Time 34.69 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:2567084-2567204 1.85e-02 120 chr3R:16573919-16574039 4.66e-01 120 chr3L:2411038-2411158 4.44e-01 120 chr3L:9614094-9614214 4.02e-03 30_[+1(5.05e-05)]_82 chr3R:10636129-10636249 3.33e-02 17_[+1(3.74e-06)]_95 chr2L:8611008-8611128 4.55e-01 120 chr3L:1880819-1880939 1.79e-01 4_[+1(3.35e-05)]_108 chr3L:2572132-2572252 3.56e-02 77_[+5(7.42e-05)]_35 chr3R:16558924-16559044 1.66e-02 88_[+3(4.55e-05)]_24 chr3R:22108464-22108584 9.26e-01 120 chrX:5973499-5973619 3.64e-02 30_[+1(3.74e-06)]_82 chrX:6179529-6179649 4.96e-01 120 chrX:13137158-13137278 4.88e-03 2_[+1(3.74e-06)]_110 chr2R:22450451-22450571 9.98e-01 120 chr2R:23202124-23202244 1.20e-01 61_[+5(7.42e-05)]_51 chrX:771819-771939 6.87e-01 120 chr2R:21895033-21895153 3.15e-01 [+1(3.35e-05)]_112 chr3R:26280497-26280617 8.90e-02 3_[+1(3.74e-06)]_109 chrX:4262798-4262918 2.42e-01 120 chr2L:5771297-5771417 1.63e-02 43_[+2(5.11e-05)]_69 chr3R:8920186-8920306 5.31e-04 11_[+5(2.15e-06)]_101 chr3R:8354524-8354644 9.36e-01 120 chr3R:26006041-26006161 6.59e-04 120 chr2R:14726132-14726252 8.92e-01 120 chr3L:2533824-2533944 4.35e-01 120 chrX:12221673-12221793 4.01e-01 120 chr2L:14094770-14094890 1.84e-01 120 chr2R:20906647-20906767 2.38e-03 106_[+2(1.89e-05)]_6 chr2R:14137011-14137131 8.67e-01 120 chr3L:3288561-3288681 1.66e-02 21_[+2(2.25e-05)]_49_[+2(1.89e-05)]_\ 34 chrX:13434188-13434308 5.03e-01 120 chrX:5972167-5972287 1.91e-02 94_[+4(7.22e-05)]_18 chr2L:18505651-18505771 4.55e-01 120 chr3R:31709314-31709434 5.25e-01 120 chr2R:11738644-11738764 4.20e-01 120 chr3R:31060357-31060477 1.95e-02 120 chr3L:16385982-16386102 9.83e-01 120 chr3L:6220370-6220490 9.91e-03 120 chr3R:23921827-23921947 8.82e-01 120 chr3R:26242568-26242688 2.73e-02 5_[+5(7.42e-05)]_107 chr3R:14077184-14077304 2.91e-01 120 chrX:9119362-9119482 9.59e-01 120 chr2L:2729985-2730105 9.01e-05 7_[+1(6.75e-05)]_18_[+2(7.10e-06)]_\ 79 chr2L:2731485-2731605 5.77e-01 120 chrX:10601737-10601857 4.19e-01 120 chr3R:10648917-10649037 5.05e-02 39_[+5(7.42e-05)]_73 chr3R:28677008-28677128 7.49e-01 120 chrX:12454511-12454631 2.05e-01 120 chr3L:15234647-15234767 1.06e-01 14_[+1(6.75e-05)]_98 chrX:1880396-1880516 9.01e-01 120 chr2L:10468557-10468677 5.33e-01 120 chr2L:19930215-19930335 9.91e-01 120 chrX:10067645-10067765 4.78e-01 120 chrX:2861065-2861185 3.53e-01 120 chrX:10387794-10387914 7.82e-01 120 chr2L:1427914-1428034 9.31e-02 4_[+2(7.10e-06)]_108 chrX:9352826-9352946 1.00e+00 120 chr3R:25004908-25005028 4.39e-01 120 chr3R:8811029-8811149 7.12e-01 120 chr3L:10745718-10745838 1.00e+00 120 chr3R:10888650-10888770 1.32e-01 93_[+2(7.76e-05)]_19 chrX:2708316-2708436 4.80e-02 120 chr3L:8029523-8029643 9.67e-01 120 chr2L:9911919-9912039 1.14e-04 68_[+4(2.09e-06)]_44 chr3R:19627844-19627964 9.04e-01 120 chr2L:7635336-7635456 3.99e-01 120 chr2L:20734311-20734431 9.58e-01 120 chr3R:29089855-29089975 6.92e-01 120 chr3L:1216599-1216719 6.49e-01 120 chr2L:7266108-7266228 9.99e-01 120 chrX:11653151-11653271 2.83e-01 120 chr2R:24132858-24132978 1.71e-02 81_[+2(5.11e-05)]_31 chr3L:16760406-16760526 7.97e-01 120 chr3R:26900144-26900264 8.78e-01 120 chr3L:5554546-5554666 6.49e-04 73_[+2(3.47e-05)]_19_[+4(2.09e-06)]_\ 12 chr3R:13999709-13999829 5.59e-01 120 chr2L:19285652-19285772 9.69e-01 120 chr2R:7077054-7077174 7.48e-01 120 chrX:11341085-11341205 9.33e-01 120 chr2R:23176749-23176869 5.53e-01 120 chr3R:27557144-27557264 9.57e-01 120 chr3L:8419147-8419267 8.04e-01 120 chr3L:4603587-4603707 9.33e-01 120 chrX:8273868-8273988 3.01e-02 53_[+2(4.51e-05)]_59 chr3R:18315358-18315478 1.25e-02 19_[+1(2.05e-05)]_93 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********************************************************************************