******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dp.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3L:21773998-21774118 1.0000 120 chr3L:1333114-1333234 1.0000 120 chr2R:9165607-9165727 1.0000 120 chr3L:4510452-4510572 1.0000 120 chr3R:24922395-24922515 1.0000 120 chr2R:7793543-7793663 1.0000 120 chrX:19520511-19520631 1.0000 120 chr3L:17027458-17027578 1.0000 120 chr2R:22332050-22332170 1.0000 120 chr2L:19484665-19484785 1.0000 120 chr3L:16390924-16391044 1.0000 120 chr2R:8167850-8167970 1.0000 120 chr2R:7709499-7709619 1.0000 120 chr3L:8964642-8964762 1.0000 120 chr2R:6041875-6041995 1.0000 120 chr3L:995806-995926 1.0000 120 chr2R:23877939-23878059 1.0000 120 chrX:16783459-16783579 1.0000 120 chr3L:8623866-8623986 1.0000 120 chr2L:8449524-8449644 1.0000 120 chr3L:9824363-9824483 1.0000 120 chr3L:11062607-11062727 1.0000 120 chr2L:811492-811612 1.0000 120 chr3R:15839470-15839590 1.0000 120 chr3R:29202562-29202682 1.0000 120 chrX:14226199-14226319 1.0000 120 chr3R:22380028-22380148 1.0000 120 chr3L:16563505-16563625 1.0000 120 chr3R:24054277-24054397 1.0000 120 chr2R:17786038-17786158 1.0000 120 chr2L:8400335-8400455 1.0000 120 chr2R:13552422-13552542 1.0000 120 chr2R:8939816-8939936 1.0000 120 chr3R:9754653-9754773 1.0000 120 chr3L:12732883-12733003 1.0000 120 chr3R:15147996-15148116 1.0000 120 chr2L:4331874-4331994 1.0000 120 chr2L:9968499-9968619 1.0000 120 chr2R:17493332-17493452 1.0000 120 chr3L:16495360-16495480 1.0000 120 chr2L:885096-885216 1.0000 120 chrX:5323776-5323896 1.0000 120 chr3L:16782908-16783028 1.0000 120 chr2R:13183904-13184024 1.0000 120 chr2R:9822916-9823036 1.0000 120 chr2L:3785555-3785675 1.0000 120 chr3L:3940392-3940512 1.0000 120 chr3L:8534545-8534665 1.0000 120 chr2R:19122099-19122219 1.0000 120 chr3L:12206007-12206127 1.0000 120 chrX:20427000-20427120 1.0000 120 chr3R:15786618-15786738 1.0000 120 chrX:13194409-13194529 1.0000 120 chrX:2170572-2170692 1.0000 120 chrX:11459027-11459147 1.0000 120 chr2L:5526872-5526992 1.0000 120 chr2R:23877614-23877734 1.0000 120 chrX:8443081-8443201 1.0000 120 chrX:646559-646679 1.0000 120 chr2L:11269680-11269800 1.0000 120 chr2L:5624180-5624300 1.0000 120 chr2R:14427087-14427207 1.0000 120 chrX:14603690-14603810 1.0000 120 chr2R:11844184-11844304 1.0000 120 chr3L:17055457-17055577 1.0000 120 chr2L:8040986-8041106 1.0000 120 chr2L:9920072-9920192 1.0000 120 chrX:336743-336863 1.0000 120 chrX:18410206-18410326 1.0000 120 chr3L:19913700-19913820 1.0000 120 chr2R:11442361-11442481 1.0000 120 chrX:5695201-5695321 1.0000 120 chr2R:16240708-16240828 1.0000 120 chr3L:3457052-3457172 1.0000 120 chr2R:10729277-10729397 1.0000 120 chr3L:5897398-5897518 1.0000 120 chr2L:20427531-20427651 1.0000 120 chr3R:7973190-7973310 1.0000 120 chr3R:11429953-11430073 1.0000 120 chr2R:19390003-19390123 1.0000 120 chrX:8265397-8265517 1.0000 120 chr3L:16100157-16100277 1.0000 120 chr3R:8807233-8807353 1.0000 120 chr3R:18572968-18573088 1.0000 120 chr2R:24857337-24857457 1.0000 120 chr2R:19502967-19503087 1.0000 120 chr3L:3947413-3947533 1.0000 120 chr3L:8071783-8071903 1.0000 120 chrX:6687413-6687533 1.0000 120 chr3R:10052830-10052950 1.0000 120 chr3L:7975052-7975172 1.0000 120 chr3L:17035542-17035662 1.0000 120 chr3L:1331664-1331784 1.0000 120 chr2L:292333-292453 1.0000 120 chr2R:16957381-16957501 1.0000 120 chr3R:25023167-25023287 1.0000 120 chr2L:14334037-14334157 1.0000 120 chr2R:21560106-21560226 1.0000 120 chr2L:106707-106827 1.0000 120 chr2R:11841506-11841626 1.0000 120 chr2L:4979312-4979432 1.0000 120 chr2L:2815826-2815946 1.0000 120 chr3R:21878654-21878774 1.0000 120 chrX:2617593-2617713 1.0000 120 chrX:11459416-11459536 1.0000 120 chr3L:11728251-11728371 1.0000 120 chr2R:10557151-10557271 1.0000 120 chr3R:19642727-19642847 1.0000 120 chrX:17106295-17106415 1.0000 120 chr3L:21210071-21210191 1.0000 120 chrX:17629462-17629582 1.0000 120 chr2L:10483187-10483307 1.0000 120 chr2R:20870686-20870806 1.0000 120 chrX:1900601-1900721 1.0000 120 chr2L:15764135-15764255 1.0000 120 chr3L:20541132-20541252 1.0000 120 chr2L:1147719-1147839 1.0000 120 chr3L:18821122-18821242 1.0000 120 chr3R:10767771-10767891 1.0000 120 chr2R:23878324-23878444 1.0000 120 chr3L:20113197-20113317 1.0000 120 chr2R:16283098-16283218 1.0000 120 chr2L:1504416-1504536 1.0000 120 chr2R:7712018-7712138 1.0000 120 chrX:8129357-8129477 1.0000 120 chrX:20389699-20389819 1.0000 120 chr3R:8561654-8561774 1.0000 120 chrX:8240552-8240672 1.0000 120 chr2L:11282019-11282139 1.0000 120 chr2L:20926061-20926181 1.0000 120 chr3R:30443849-30443969 1.0000 120 chr3R:15367649-15367769 1.0000 120 chr2R:12692677-12692797 1.0000 120 chr2R:22870948-22871068 1.0000 120 chr2R:22080036-22080156 1.0000 120 chrX:15732035-15732155 1.0000 120 chrX:16695163-16695283 1.0000 120 chr2R:20319046-20319166 1.0000 120 chrX:1821195-1821315 1.0000 120 chr2R:12510790-12510910 1.0000 120 chrX:1865793-1865913 1.0000 120 chrX:15769574-15769694 1.0000 120 chrX:13211913-13212033 1.0000 120 chr2R:6459847-6459967 1.0000 120 chr3L:1735751-1735871 1.0000 120 chr2R:12521324-12521444 1.0000 120 chr3R:25235514-25235634 1.0000 120 chr3L:4277879-4277999 1.0000 120 chr3R:10815180-10815300 1.0000 120 chrX:14603942-14604062 1.0000 120 chrX:11615782-11615902 1.0000 120 chr2L:11948587-11948707 1.0000 120 chr2L:560351-560471 1.0000 120 chr2R:18710820-18710940 1.0000 120 chr2L:16261726-16261846 1.0000 120 chr3R:9748026-9748146 1.0000 120 chr2L:9253088-9253208 1.0000 120 chr2L:8220691-8220811 1.0000 120 chr2R:18711064-18711184 1.0000 120 chrX:11621405-11621525 1.0000 120 chrX:5941925-5942045 1.0000 120 chr2L:6448479-6448599 1.0000 120 chr3R:5821389-5821509 1.0000 120 chr2L:18714233-18714353 1.0000 120 chrX:16321206-16321326 1.0000 120 chrX:13667814-13667934 1.0000 120 chr2R:13414677-13414797 1.0000 120 chr2R:8683012-8683132 1.0000 120 chr3R:29503901-29504021 1.0000 120 chrX:2344642-2344762 1.0000 120 chr3R:27695147-27695267 1.0000 120 chr3L:7094204-7094324 1.0000 120 chr3L:13866927-13867047 1.0000 120 chr2R:18705869-18705989 1.0000 120 chr2R:22073323-22073443 1.0000 120 chr2L:8305500-8305620 1.0000 120 chr3L:3461248-3461368 1.0000 120 chrX:17924191-17924311 1.0000 120 chrX:20162710-20162830 1.0000 120 chr3R:18230381-18230501 1.0000 120 chrX:15841435-15841555 1.0000 120 chr3R:7902641-7902761 1.0000 120 chr2L:17433317-17433437 1.0000 120 chr3L:20788109-20788229 1.0000 120 chrX:4647744-4647864 1.0000 120 chrX:7066787-7066907 1.0000 120 chr3R:30177645-30177765 1.0000 120 chr2L:13790851-13790971 1.0000 120 chr2L:4830686-4830806 1.0000 120 chrX:4627284-4627404 1.0000 120 chr2L:16326999-16327119 1.0000 120 chrX:9273305-9273425 1.0000 120 chr3R:20581518-20581638 1.0000 120 chr3R:7643676-7643796 1.0000 120 chr3R:27929674-27929794 1.0000 120 chr2R:14993817-14993937 1.0000 120 chr2R:11853147-11853267 1.0000 120 chr3L:20028994-20029114 1.0000 120 chr3R:16651099-16651219 1.0000 120 chr3R:8344324-8344444 1.0000 120 chr3R:17040132-17040252 1.0000 120 chr3R:8343478-8343598 1.0000 120 chr2L:20223109-20223229 1.0000 120 chr2R:13415045-13415165 1.0000 120 chr2R:14526126-14526246 1.0000 120 chr3L:15576514-15576634 1.0000 120 chr2R:8435039-8435159 1.0000 120 chr2L:2758281-2758401 1.0000 120 chrX:8461210-8461330 1.0000 120 chr3L:9364285-9364405 1.0000 120 chr2L:1502899-1503019 1.0000 120 chrX:3174984-3175104 1.0000 120 chr2L:13382444-13382564 1.0000 120 chrX:10385077-10385197 1.0000 120 chrX:19618499-19618619 1.0000 120 chr3R:7155145-7155265 1.0000 120 chr2R:8170162-8170282 1.0000 120 chr3L:19979809-19979929 1.0000 120 chr3R:18385721-18385841 1.0000 120 chr3L:9974312-9974432 1.0000 120 chr3R:9254961-9255081 1.0000 120 chr2R:13205311-13205431 1.0000 120 chr2R:17670005-17670125 1.0000 120 chr3R:8217870-8217990 1.0000 120 chr3L:13040990-13041110 1.0000 120 chr2R:24017218-24017338 1.0000 120 chrX:476872-476992 1.0000 120 chr3L:10882770-10882890 1.0000 120 chr2R:24668308-24668428 1.0000 120 chr3R:27679126-27679246 1.0000 120 chr3L:18865541-18865661 1.0000 120 chrX:8442313-8442433 1.0000 120 chrX:15572098-15572218 1.0000 120 chr3L:8180818-8180938 1.0000 120 chr2L:5525801-5525921 1.0000 120 chr3R:16180618-16180738 1.0000 120 chr2L:9089674-9089794 1.0000 120 chr3L:1756237-1756357 1.0000 120 chr3R:29993374-29993494 1.0000 120 chr3R:22381235-22381355 1.0000 120 chr2R:7516329-7516449 1.0000 120 chr3R:23053466-23053586 1.0000 120 chr2R:9039544-9039664 1.0000 120 chr2R:12923763-12923883 1.0000 120 chr2R:7961832-7961952 1.0000 120 chr3L:12399345-12399465 1.0000 120 chr2R:23843259-23843379 1.0000 120 chr3L:19913905-19914025 1.0000 120 chr2R:17563500-17563620 1.0000 120 chr2L:4198354-4198474 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_Dp/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dp.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.301 C 0.2 G 0.194 T 0.305 Background letter frequencies (from file dataset with add-one prior applied): A 0.301 C 0.2 G 0.194 T 0.305 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF SGCGCSMA MEME-1 width = 8 sites = 194 llr = 1369 E-value = 1.8e-114 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1::::167 pos.-specific C 32a:8531 probability G 58:a23:1 matrix T 1::::121 bits 2.4 ** 2.1 ** 1.9 ** 1.7 **** Relative 1.4 **** Entropy 1.2 **** (10.2 bits) 0.9 **** 0.7 ****** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGCGCCAA consensus CC GC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:8442313-8442433 94 5.29e-06 AAAGCTTTTT GGCGCCaa tttggttatc chr2R:13205311-13205431 45 5.29e-06 TGTTGTGTTT GGCGCCAA ACGGGCGGCA chr3L:20788109-20788229 75 5.29e-06 GGCCGCGAAT GGCGCCAA TACTTCAGTG chrX:5941925-5942045 27 5.29e-06 TTCAAATTGT GGCGCCAA TATAGTTGGT chr2R:20319046-20319166 10 5.29e-06 TTGAATTTT GGCGCCAA TACGTTAACC chr3L:20113197-20113317 83 5.29e-06 CGCTATGATG GGCGCCAA GCAAATAAGT chr3R:10767771-10767891 108 5.29e-06 GTTATTATTA GGCGCCAA GTTTG chr2L:1147719-1147839 50 5.29e-06 GATAACCTGC GGCGCCAA AAGACAGAGT chr2R:10557151-10557271 23 5.29e-06 GAACTGAGTG GGCGCCAA CATATCGATA chr2L:2815826-2815946 79 5.29e-06 ACTGCTTGAT GGCGCCAA TCTATAAGAA chr2R:19502967-19503087 4 5.29e-06 AAA GGCGCCAA CGAACTAATA chr2R:24857337-24857457 88 5.29e-06 GCACCATATG GGCGCCAA CTTCAAATTT chrX:336743-336863 24 5.29e-06 TATCCAAACA GGCGCCAA TTTTTGTTTT chr2L:8040986-8041106 17 5.29e-06 TTTTAAACTA GGCGCCAA GTTAACTGTG chrX:13194409-13194529 82 5.29e-06 TTTCTAAGCT GGCGCCAA gttcaaacac chr2R:13183904-13184024 80 5.29e-06 CTGCTGCTTG GGCGCCAA AGTTTGAACT chr3R:15147996-15148116 31 5.29e-06 TTTAAAAATG GGCGCCAA GTTTTTTGAA chr3L:16563505-16563625 92 5.29e-06 CAGTTGCCTT GGCGCCAA ATTAGATCAC chr3L:995806-995926 83 5.29e-06 TTTCAACATA GGCGCCAA ATTTAAATTC chr3L:8964642-8964762 79 5.29e-06 ACGGCTTATG GGCGCCAA TTTCAAACGA chr2R:7709499-7709619 91 5.29e-06 AACCATGTTG GGCGCCAA TATTCGAAAT chr3L:16390924-16391044 75 5.29e-06 ATCGATAAAT GGCGCCAA GTTTATTGTT chr2R:22332050-22332170 61 5.29e-06 ATCGATAGCT GGCGCCAA AAGACAGCAC chr3L:10882770-10882890 29 8.81e-06 AAATAATGTT GGCGCCCA AAAAGTGTGT chr3R:7902641-7902761 93 8.81e-06 GCTGATTTTT GGCGCCCA TTTAAAAATT chrX:15841435-15841555 47 8.81e-06 cggcaggttt ggcgccca cgcttttgaa chrX:17629462-17629582 107 8.81e-06 TCAAACCATT GGCGCCCA GAATTA chr3L:8071783-8071903 34 8.81e-06 CACCACAGCT GGCGCCCA CCACTGCGCA chr2L:17433317-17433437 72 1.39e-05 ACGCACATTT GGCGCGAA ACGTAGCGGA chr2R:12692677-12692797 80 1.39e-05 TTTTTAGCTA GGCGCGAA AATTTAAATT chr2L:4979312-4979432 67 1.39e-05 GCTTAGCTTG GGCGCGAA ATAAAAGACA chr3R:8807233-8807353 77 1.39e-05 TAATCTTTAG GGCGCGAA ATTTAAATAA chr2R:10729277-10729397 89 1.39e-05 TTTATTCGTG GGCGCGAA TTTATTCGTT chr2R:11844184-11844304 105 1.39e-05 AGCTTATTTG GGCGCGAA AGTTTTGA chr3L:1756237-1756357 30 2.28e-05 GCCGATAAGT CGCGCCAA AGCTATCGGT chr2R:24017218-24017338 78 2.28e-05 AACGATAGAT GGCGCGCA GCTCGAAGAA chr3L:9974312-9974432 32 2.28e-05 TGTTGACTTT CGCGCCAA CTTTTGGGTG chr3R:7155145-7155265 101 2.28e-05 ATACCAAATG GGCGCGCA AATTATATTA chr2R:14526126-14526246 61 2.28e-05 CAAACAGGAG CGCGCCAA ACAGCGCATG chr3R:18230381-18230501 27 2.28e-05 AATTCAAGCT CGCGCCAA TCGATAGGTG chr2R:22080036-22080156 40 2.28e-05 TCTTTAGTTC GGCGCGCA GATCTCTGTC chrX:8129357-8129477 28 2.28e-05 GTTTTTTTTT GGCGCGCA AGCACCTATT chr2L:15764135-15764255 14 2.28e-05 TTAAAATGCT CGCGCCAA ACTAAAACTA chr3L:11728251-11728371 19 2.28e-05 AATGTTTCTG CGCGCCAA AAATCAATCG chrX:8265397-8265517 95 2.28e-05 CAACGCCAAC GGCGCGCA ATTTGAATTA chrX:18410206-18410326 81 2.28e-05 TCTTTCATTT GGCGCGCA ATGCGTGGAA chr3L:17055457-17055577 36 2.28e-05 TTCAATTGCG CGCGCCAA ATGCTCGACG chr3R:15786618-15786738 24 2.28e-05 TTTAAATATG CGCGCCAA TTCTGACAGT chr3L:3940392-3940512 37 2.28e-05 ATAGTTGAGT GGCGCGCA AAGCTGATTC chr3R:9754653-9754773 93 2.28e-05 TTTTGAATTG CGCGCCAA GCCGCCCTTA chr3R:24054277-24054397 56 2.28e-05 TTTAAAAATT CGCGCCAA CTCGATAAAT chr3L:11062607-11062727 91 2.28e-05 ACAAGAAATG CGCGCCAA ATAAAAATTC chr2R:12510790-12510910 87 2.64e-05 AAATTCACTG CGCGCCCA AGTAACGGGC chr2R:13414677-13414797 93 3.17e-05 AGCTCTCAGG CGCGCGAA TTATTCAAAT chr2L:20926061-20926181 59 3.17e-05 AACAATAAAA CGCGCGAA CGTAGAGCTG chr2R:18705869-18705989 21 3.71e-05 TTCAAAATTT GGCGCCTA CTTCGATATC chr3R:8344324-8344444 20 4.61e-05 TTTAAATTAT GCCGCCAA TATTTTGCCA chrX:20162710-20162830 19 4.61e-05 TGACTGTTTT CGCGCGCA ATGAACGTCG chr3L:17035542-17035662 16 4.61e-05 TTGAGCATAA GCCGCCAA AATTCAAAAT chr2L:20427531-20427651 59 4.61e-05 CACGCCTATC GCCGCCAA ATAATCGATA chrX:646559-646679 19 4.61e-05 tccaacgcta cgcgcgca cttttgaaaa chr3L:3457052-3457172 93 5.66e-05 TAGTATGAAT GGCGCCAT CTTTTGAAAA chr3L:19979809-19979929 107 7.93e-05 TTCACAACTA GGCGCGTA AATTTG chr2R:22073323-22073443 44 7.93e-05 TTGATAAAGT GGCGCGTA GTGTGACCGC chr2L:6448479-6448599 90 7.93e-05 TAGTAGGTCT GGCGCGTA ATTTGAATAT chr2R:14427087-14427207 10 7.93e-05 TTTGATTTT GGCGCCAC AAGACAGAAA chr2R:23877614-23877734 31 7.93e-05 TTCAAATTTT GGCGCCCT AGAAAGCCGT chr3L:17027458-17027578 68 7.93e-05 TCGATAATTT GGCGCCAG CTTTGTTGAA chr3L:21773998-21774118 2 7.93e-05 T GGCGCCAG AATTCAAATA chrX:16321206-16321326 73 8.46e-05 TGGTTTTTCT GCCGCGAA ATTTGAAAAT chr2R:12923763-12923883 24 1.13e-04 ATTTAAAATC CGCGCCTA AGCTCTGTAA chr2R:24668308-24668428 92 1.13e-04 ATAGAAAATG GGCGGGAA TTTACAAACA chr3L:20028994-20029114 89 1.13e-04 TTATCGATTA GGCGCTAA ATATTACAAT chr2R:14993817-14993937 107 1.13e-04 CATTTTGTTG CGCGCCTA AATTCA chr2L:13790851-13790971 64 1.13e-04 GGACGACTTA GGCGCTAA TGGAAATGTC chr3L:13866927-13867047 56 1.13e-04 CGAACTCGCT CGCGCCTA TCGATTTGTC chr2L:560351-560471 89 1.13e-04 CCTCCAATGG GGCGCTAA ATTCAAAGTA chr2R:23878324-23878444 73 1.13e-04 AACGGCTTTT GGCGCCCG AGTGGCGCTG chr2L:10483187-10483307 38 1.13e-04 ACAATCAGTT GGCGGGAA GGGAATGCCC chr2L:14334037-14334157 19 1.13e-04 ACTTAAACTT GGCGCCCG AGTTCCTTTT chr2L:11269680-11269800 53 1.13e-04 TGAACTGGCT CGCGCCTA TTTACTGGTT chr2R:8939816-8939936 102 1.13e-04 GCATGCAATT GGCGGGAA TTTTAAAAAA chr3L:9824363-9824483 41 1.13e-04 ATTTAAATTT GGCGCTAA CTGCTTGCAA chr2L:8449524-8449644 84 1.13e-04 CCGCGCTTTT GGCGGGAA ATAATAAAAT chr2L:1502899-1503019 92 1.30e-04 TTTTTACTTT CCCGCCAA TATGACATTT chr3R:27695147-27695267 25 1.30e-04 TTTAAATGGT CCCGCCAA AAAACGTTCT chrX:11615782-11615902 46 1.30e-04 AACAAGAAAG AGCGCCAA TAGTTATCGA chrX:14603942-14604062 34 1.30e-04 CCTTCCCAAT CCCGCCAA ATATTTTAAA chr3L:20541132-20541252 106 1.30e-04 AAGAAAAAAG CCCGCCAA GTTCAAA chr2R:21560106-21560226 85 1.30e-04 CCGGTTGGTG CCCGCCAA GAATACAAAT chrX:14603690-14603810 48 1.30e-04 TAGACAGCTG CCCGCCAA CCAATTAAAA chr3R:29503901-29504021 96 1.60e-04 CTGTTAACTT GGCGCGCT GTCTACGAAA chr2R:17493332-17493452 70 1.60e-04 ACTAGTAGCT GGCGCGCT TTAGTTTAAA chr2R:8167850-8167970 32 1.60e-04 GTTTAAAAAG CGCGCCAT GATATCGATA chrX:19520511-19520631 83 1.60e-04 CGAAGGCGAT GGCGCTCA ACTTGGATTT chr3L:7094204-7094324 102 1.93e-04 TGATGAGTTT GGCGCGCC GTTTAAAATA chr3R:10815180-10815300 36 1.93e-04 TTTTTAAACG CGCGCCAC AAAGGGGAAA chrX:13211913-13212033 75 1.93e-04 ATCGATAAAT GGCGCGCG TCTTATTTCT chrX:11459416-11459536 70 1.93e-04 CGTTCAGTTT CGCGGCCA ACGTTGCCAC chr3R:23053466-23053586 54 2.07e-04 TTCGCCACGC AGCGCGAA CAATCGCCGT chrX:5323776-5323896 76 2.07e-04 CTACGCTTTT CCCGCGAA AAAACTTTGC chr2R:13552422-13552542 83 2.07e-04 CGCGAAAGTA AGCGCGAA ATTTAAAAAC chr3R:8561654-8561774 46 2.52e-04 TTTGAAAAGC CGCGGGAA CAAAGAAATT chr2R:11442361-11442481 107 2.52e-04 AAAAGCGCCA TGCGCCAA AACTGT chr2L:19484665-19484785 86 2.52e-04 TCGATCGATA GCCGCCTA ATCAAAGCGC chr2R:8170162-8170282 66 2.72e-04 CTTGTATACT CCCGCGCA AACAAACGGG chrX:8461210-8461330 13 2.72e-04 TTCAAATGCT AGCGCGCA TTTGAATGCG chr2L:16261726-16261846 7 2.72e-04 TTTATT GGCGCCTT TATCAATTCC chr2R:12521324-12521444 33 2.72e-04 ATTTGAAAAT GGCGCCTT TTCCGTTCTT chrX:15732035-15732155 26 2.72e-04 ATTTAATTTG GGCGCCTT TCAATTTGAA chr2L:11282019-11282139 4 2.72e-04 TCT CCCGCGCA TTTTTAGTTA chr2R:20870686-20870806 24 2.72e-04 ATTTGAAATG AGCGCGCA CTTAGTGGGA chr3R:19642727-19642847 51 2.72e-04 TCGATAACTG AGCGCGCA GCTTAAAAGT chr2L:292333-292453 33 2.72e-04 ATTTGATTTT CCCGCGCA CTAACTCTGG chr3L:12732883-12733003 33 2.72e-04 ATTTAAAATT GGCGCCTT ACTTTTAGCG chr3R:18385721-18385841 8 3.13e-04 TAAATAG CGCGCTCA TCAACAGATC chr3L:4277879-4277999 11 3.13e-04 TTTCAAATCT CGCGCTCA CCATAAACCG chr3L:21210071-21210191 42 3.13e-04 ATCGAAGTTT GGCGCACA GCTTTCGACG chrX:17106295-17106415 7 3.13e-04 actttt cgcgcgac aatgaaaagc chr3R:18572968-18573088 21 3.13e-04 AAATTTGAAT CGCGCGCT CAGTTCAACA chrX:11459027-11459147 17 3.13e-04 TTCGAAATTT GCCGCCAT TTGAAGATGT chr2L:3785555-3785675 41 3.13e-04 GAATAATAAA TGCGCCCA AAACTTCGCA chr2L:811492-811612 106 3.13e-04 CAGCTGACTT GCCGGCAA ATGAAAA chr3L:4510452-4510572 16 3.13e-04 TTTTGAATTG CGCGCTCA GTTATTTTGA chr3R:17040132-17040252 45 3.57e-04 ACCGCATTGC GCCGCCAC AAAAATCGAC chr3L:1735751-1735871 73 3.86e-04 TGTTATCGAG GGCGGCAC ATTTAAAAAG chr2L:9968499-9968619 93 3.86e-04 AATTCAAACT GGCGCGTT TGTTTTTAGC chr3L:3461248-3461368 61 4.37e-04 TATTTTCTAC GCCGCTAA GTCCGGTCAC chrX:11621405-11621525 15 4.37e-04 ATATCTGCCT TGCGCGCA CGCATTGCAG chr3L:5897398-5897518 2 4.37e-04 G CGCGCAAA TTAGATATGG chr3R:15839470-15839590 17 4.37e-04 AATAACATTC GCCGGGAA TAAGCTTTTA chr3R:29993374-29993494 76 4.89e-04 GTAATCTTTT GGCGGGAT GATTTAAAAA chr3R:15367649-15367769 83 4.89e-04 CGATAACTTG GGCGCGTC TTTTAAAACT chr2L:106707-106827 80 4.89e-04 TTGGCTTATT GGCGCGTG CCTTTCATAT chr3L:3947413-3947533 26 4.89e-04 TTTTGAATTT GGCGGTAA GCGAAACGGG chr2R:19390003-19390123 33 4.89e-04 TTTAAATAGA ACCGCCAA GATCCGTGGA chr2L:9920072-9920192 49 4.89e-04 ATAATTAAAC GGCGGCCG ATAGCAGTTG chrX:8443081-8443201 48 4.89e-04 AAGCCATTTA GGCGCGTC ATTCAAATGG chr2R:19122099-19122219 69 4.89e-04 TCGATAGTTG ACCGCCAA ACTTGCTGCT chr3L:16495360-16495480 84 4.89e-04 TCAAAATGTC ACCGCCAA ACGCAGCGTA chr2L:8400335-8400455 96 4.89e-04 GGCTTCCATT CGCGGCTA AATAAATATA chr3R:22380028-22380148 27 4.89e-04 CTTAAAGTTT CGCGCCTT GTTATCGATA chr3L:8623866-8623986 100 4.89e-04 GAGTGCATTG GGCGGtaa aattcaaagt chr3L:8180818-8180938 29 5.91e-04 TTTAAAATTA GGCGGGAG CTTTTCCCTG chr2R:22870948-22871068 17 5.91e-04 ATTTGAATTT ACCGCCCA GCAAACCTGT chr3L:18821122-18821242 71 5.91e-04 TTTCCAAAGT GGCGGGAC AATTGGCTTC chr3L:12206007-12206127 81 5.91e-04 GATTACTTTT GGCGGGCT TATATCGTTT chr3R:29202562-29202682 89 5.91e-04 AAATAAAAAG CGCGGCAT TCATTTAAAT chr3L:16782908-16783028 29 6.45e-04 TCGTAAGTCT CCCGCCAC TCAGTTTGAA chr2R:9039544-9039664 109 7.11e-04 TAAACCGATT CGCGGCAG TGTT chr2L:1504416-1504536 102 7.87e-04 ATGTAAAAAT TCCGCCAA ATTCAAATAC chr3R:25023167-25023287 27 7.87e-04 CACCTTTTAA AGCGGGAA TTTCGATGTT chrX:9273305-9273425 32 8.69e-04 AAGATTTTGC CGCGGCCC AGTATTTTCG chrX:4627284-4627404 32 8.69e-04 TTTTAAATTT GGCGGAAA ACGGTGTGCC chrX:4647744-4647864 27 8.69e-04 TTTTAACTTT GCCGCCTT TGCATTTGAA chrX:15769574-15769694 29 8.69e-04 ATTTGAATTA ACCGCGCA GTTCACATTC chrX:5695201-5695321 61 8.69e-04 GATCGCCATT TGCGGCAA CGCTTATCGA chr2L:9089674-9089794 16 9.35e-04 ATTCAATTTT GGCGGCTT CTACTAGCTT chr3R:7643676-7643796 35 9.35e-04 GGTCGAACTT AGCGCGAC TGTATCGTTC chr3R:20581518-20581638 93 9.35e-04 TCAAAACTAC AGCGCGAG ATTTTAAAGT chr2L:5526872-5526992 103 9.35e-04 TGTACACACT GCCGCACA CTTAACGAAC chrX:16783459-16783579 60 9.35e-04 TTCAAAAGTG AGCGCGAC GCGCTGTTGA chr2R:17563500-17563620 84 1.03e-03 CCATTCTCAA CGCGGTCA CACTTTTTAT chr3R:27679126-27679246 14 1.03e-03 TTTGGAATAG CGCGGGCT ATTCGCAATT chr3R:21878654-21878774 96 1.03e-03 AGTCGATAAT TGCGCGTA ATTTGAAATT chr3L:16100157-16100277 44 1.03e-03 CAATCTACAT CGCGGGCT GTGCACTGTG chrX:14226199-14226319 107 1.03e-03 AAAAACGCGA GCCGCCTG AAAAGC chr2R:6041875-6041995 45 1.03e-03 ATTTGAAAAT GGCGCACT ATCAGAATGA chr3R:11429953-11430073 21 1.15e-03 ACCCAGAAAA TGCGCGAT ATTTTTGAAT chrX:476872-476992 94 1.21e-03 GATCGCAGTC GGCGCTTT TGTATGTATT chr2L:2758281-2758401 91 1.21e-03 TTCAAATATA AGCGCAAA AATTTCTAAA chr2R:8435039-8435159 40 1.21e-03 TTTAAAAAAA CCCGCAAA GCTTTTGGCC chr3R:25235514-25235634 86 1.21e-03 ACCAGTCAAA GGCGGTTA CAATTCAATT chr2R:7961832-7961952 69 1.31e-03 GAGACAGTTC TGCGCGAC TATATCGATT chr2L:5525801-5525921 84 1.31e-03 TGCCCTGCAT TGCGCTCA GCTGTTCGGT chrX:10385077-10385197 37 1.31e-03 ATTTCTTAAG TGCGCGAC CTATCGCCTA chr3R:16651099-16651219 86 1.31e-03 GTTTTCCCAG TGCGCGAG ATATTACAAA chr3R:5821389-5821509 55 1.31e-03 TATATAATGC GCCGCTAT AGTACTTTAA chr2L:4830686-4830806 66 1.37e-03 GATAGCAGAA GGCGGTAT TTAATACTAA chrX:17924191-17924311 105 1.47e-03 CAAAATGAAA CGCGCACt tttaattt chr2L:11948587-11948707 80 1.47e-03 TTCTAAGCTA AGCGCCTC ATAGGCTCGA chr3R:24922395-24922515 78 1.47e-03 AATAAATAGC AGCGCCTG GTAACACTAC chr3R:22381235-22381355 105 1.52e-03 ATCTCCAAAG CGCGGCTG TGTTTTCT chr2L:16326999-16327119 87 1.52e-03 GGCAGCACTT ACCGGCCA ATAAGTCAAT chr3R:27929674-27929794 105 1.64e-03 TGCAAAAAAA GCCGGGCG CATGGGTA chrX:20389699-20389819 20 1.64e-03 CTTCAATTTA CCCGCTTA CTCGATTGCC chr3L:13040990-13041110 53 1.87e-03 TACGATTAAT TGCGCACA ATGCAGCCCT chr2R:8683012-8683132 9 1.87e-03 TTTACTTG AGCGGTAA CTTGCGTATT chr2R:9822916-9823036 22 1.87e-03 TTTTTGTTGA CCCGCGTG TAGTGTTACC chr3R:9254961-9255081 72 1.97e-03 ATCGGATTTG GCCGGCTT TTCTGTTTAC chr2R:11853147-11853267 60 2.10e-03 GGTAACACTG GCCGGACA TTTTCCCACC chr2R:16957381-16957501 77 2.10e-03 TCCAAACGTA AGCGGTCA CACTCAGAAT chrX:2170572-2170692 51 2.10e-03 TTTTAAAATA CCCGCTCT AATGAATCGT chr2R:9165607-9165727 24 2.10e-03 TTTAAATTTA GCCGCACT GTTATCGATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:8442313-8442433 5.3e-06 93_[+1]_19 chr2R:13205311-13205431 5.3e-06 44_[+1]_68 chr3L:20788109-20788229 5.3e-06 74_[+1]_38 chrX:5941925-5942045 5.3e-06 26_[+1]_86 chr2R:20319046-20319166 5.3e-06 9_[+1]_103 chr3L:20113197-20113317 5.3e-06 82_[+1]_30 chr3R:10767771-10767891 5.3e-06 107_[+1]_5 chr2L:1147719-1147839 5.3e-06 49_[+1]_63 chr2R:10557151-10557271 5.3e-06 22_[+1]_90 chr2L:2815826-2815946 5.3e-06 78_[+1]_34 chr2R:19502967-19503087 5.3e-06 3_[+1]_109 chr2R:24857337-24857457 5.3e-06 87_[+1]_25 chrX:336743-336863 5.3e-06 23_[+1]_89 chr2L:8040986-8041106 5.3e-06 16_[+1]_96 chrX:13194409-13194529 5.3e-06 81_[+1]_31 chr2R:13183904-13184024 5.3e-06 79_[+1]_33 chr3R:15147996-15148116 5.3e-06 30_[+1]_82 chr3L:16563505-16563625 5.3e-06 91_[+1]_21 chr3L:995806-995926 5.3e-06 82_[+1]_30 chr3L:8964642-8964762 5.3e-06 78_[+1]_34 chr2R:7709499-7709619 5.3e-06 90_[+1]_22 chr3L:16390924-16391044 5.3e-06 74_[+1]_38 chr2R:22332050-22332170 5.3e-06 60_[+1]_52 chr3L:10882770-10882890 8.8e-06 28_[+1]_84 chr3R:7902641-7902761 8.8e-06 92_[+1]_20 chrX:15841435-15841555 8.8e-06 46_[+1]_66 chrX:17629462-17629582 8.8e-06 106_[+1]_6 chr3L:8071783-8071903 8.8e-06 33_[+1]_79 chr2L:17433317-17433437 1.4e-05 71_[+1]_41 chr2R:12692677-12692797 1.4e-05 79_[+1]_33 chr2L:4979312-4979432 1.4e-05 66_[+1]_46 chr3R:8807233-8807353 1.4e-05 76_[+1]_36 chr2R:10729277-10729397 1.4e-05 88_[+1]_24 chr2R:11844184-11844304 1.4e-05 104_[+1]_8 chr3L:1756237-1756357 2.3e-05 29_[+1]_83 chr2R:24017218-24017338 2.3e-05 77_[+1]_35 chr3L:9974312-9974432 2.3e-05 31_[+1]_81 chr3R:7155145-7155265 2.3e-05 100_[+1]_12 chr2R:14526126-14526246 2.3e-05 60_[+1]_52 chr3R:18230381-18230501 2.3e-05 26_[+1]_86 chr2R:22080036-22080156 2.3e-05 39_[+1]_73 chrX:8129357-8129477 2.3e-05 27_[+1]_85 chr2L:15764135-15764255 2.3e-05 13_[+1]_99 chr3L:11728251-11728371 2.3e-05 18_[+1]_94 chrX:8265397-8265517 2.3e-05 94_[+1]_18 chrX:18410206-18410326 2.3e-05 80_[+1]_32 chr3L:17055457-17055577 2.3e-05 35_[+1]_77 chr3R:15786618-15786738 2.3e-05 23_[+1]_89 chr3L:3940392-3940512 2.3e-05 36_[+1]_76 chr3R:9754653-9754773 2.3e-05 92_[+1]_20 chr3R:24054277-24054397 2.3e-05 55_[+1]_57 chr3L:11062607-11062727 2.3e-05 90_[+1]_22 chr2R:12510790-12510910 2.6e-05 86_[+1]_26 chr2R:13414677-13414797 3.2e-05 92_[+1]_20 chr2L:20926061-20926181 3.2e-05 58_[+1]_54 chr2R:18705869-18705989 3.7e-05 20_[+1]_92 chr3R:8344324-8344444 4.6e-05 19_[+1]_93 chrX:20162710-20162830 4.6e-05 18_[+1]_94 chr3L:17035542-17035662 4.6e-05 15_[+1]_97 chr2L:20427531-20427651 4.6e-05 58_[+1]_54 chrX:646559-646679 4.6e-05 18_[+1]_94 chr3L:3457052-3457172 5.7e-05 92_[+1]_20 chr3L:19979809-19979929 7.9e-05 106_[+1]_6 chr2R:22073323-22073443 7.9e-05 43_[+1]_69 chr2L:6448479-6448599 7.9e-05 89_[+1]_23 chr2R:14427087-14427207 7.9e-05 9_[+1]_103 chr2R:23877614-23877734 7.9e-05 30_[+1]_82 chr3L:17027458-17027578 7.9e-05 67_[+1]_45 chr3L:21773998-21774118 7.9e-05 1_[+1]_111 chrX:16321206-16321326 8.5e-05 72_[+1]_40 chr2R:12923763-12923883 0.00011 23_[+1]_89 chr2R:24668308-24668428 0.00011 91_[+1]_21 chr3L:20028994-20029114 0.00011 88_[+1]_24 chr2R:14993817-14993937 0.00011 106_[+1]_6 chr2L:13790851-13790971 0.00011 63_[+1]_49 chr3L:13866927-13867047 0.00011 55_[+1]_57 chr2L:560351-560471 0.00011 88_[+1]_24 chr2R:23878324-23878444 0.00011 72_[+1]_40 chr2L:10483187-10483307 0.00011 37_[+1]_75 chr2L:14334037-14334157 0.00011 18_[+1]_94 chr2L:11269680-11269800 0.00011 52_[+1]_60 chr2R:8939816-8939936 0.00011 101_[+1]_11 chr3L:9824363-9824483 0.00011 40_[+1]_72 chr2L:8449524-8449644 0.00011 83_[+1]_29 chr2L:1502899-1503019 0.00013 91_[+1]_21 chr3R:27695147-27695267 0.00013 24_[+1]_88 chrX:11615782-11615902 0.00013 45_[+1]_67 chrX:14603942-14604062 0.00013 33_[+1]_79 chr3L:20541132-20541252 0.00013 105_[+1]_7 chr2R:21560106-21560226 0.00013 84_[+1]_28 chrX:14603690-14603810 0.00013 47_[+1]_65 chr3R:29503901-29504021 0.00016 95_[+1]_17 chr2R:17493332-17493452 0.00016 69_[+1]_43 chr2R:8167850-8167970 0.00016 31_[+1]_81 chrX:19520511-19520631 0.00016 82_[+1]_30 chr3L:7094204-7094324 0.00019 101_[+1]_11 chr3R:10815180-10815300 0.00019 35_[+1]_77 chrX:13211913-13212033 0.00019 74_[+1]_38 chrX:11459416-11459536 0.00019 69_[+1]_43 chr3R:23053466-23053586 0.00021 53_[+1]_59 chrX:5323776-5323896 0.00021 75_[+1]_37 chr2R:13552422-13552542 0.00021 82_[+1]_30 chr3R:8561654-8561774 0.00025 45_[+1]_67 chr2R:11442361-11442481 0.00025 106_[+1]_6 chr2L:19484665-19484785 0.00025 85_[+1]_27 chr2R:8170162-8170282 0.00027 65_[+1]_47 chrX:8461210-8461330 0.00027 12_[+1]_100 chr2L:16261726-16261846 0.00027 6_[+1]_106 chr2R:12521324-12521444 0.00027 32_[+1]_80 chrX:15732035-15732155 0.00027 25_[+1]_87 chr2L:11282019-11282139 0.00027 3_[+1]_109 chr2R:20870686-20870806 0.00027 23_[+1]_89 chr3R:19642727-19642847 0.00027 50_[+1]_62 chr2L:292333-292453 0.00027 32_[+1]_80 chr3L:12732883-12733003 0.00027 32_[+1]_80 chr3R:18385721-18385841 0.00031 7_[+1]_105 chr3L:4277879-4277999 0.00031 10_[+1]_102 chr3L:21210071-21210191 0.00031 41_[+1]_71 chrX:17106295-17106415 0.00031 6_[+1]_106 chr3R:18572968-18573088 0.00031 20_[+1]_92 chrX:11459027-11459147 0.00031 16_[+1]_96 chr2L:3785555-3785675 0.00031 40_[+1]_72 chr2L:811492-811612 0.00031 105_[+1]_7 chr3L:4510452-4510572 0.00031 15_[+1]_97 chr3R:17040132-17040252 0.00036 44_[+1]_68 chr3L:1735751-1735871 0.00039 72_[+1]_40 chr2L:9968499-9968619 0.00039 92_[+1]_20 chr3L:3461248-3461368 0.00044 60_[+1]_52 chrX:11621405-11621525 0.00044 14_[+1]_98 chr3L:5897398-5897518 0.00044 1_[+1]_111 chr3R:15839470-15839590 0.00044 16_[+1]_96 chr3R:29993374-29993494 0.00049 75_[+1]_37 chr3R:15367649-15367769 0.00049 82_[+1]_30 chr2L:106707-106827 0.00049 79_[+1]_33 chr3L:3947413-3947533 0.00049 25_[+1]_87 chr2R:19390003-19390123 0.00049 32_[+1]_80 chr2L:9920072-9920192 0.00049 48_[+1]_64 chrX:8443081-8443201 0.00049 47_[+1]_65 chr2R:19122099-19122219 0.00049 68_[+1]_44 chr3L:16495360-16495480 0.00049 83_[+1]_29 chr2L:8400335-8400455 0.00049 95_[+1]_17 chr3R:22380028-22380148 0.00049 26_[+1]_86 chr3L:8623866-8623986 0.00049 99_[+1]_13 chr3L:8180818-8180938 0.00059 28_[+1]_84 chr2R:22870948-22871068 0.00059 16_[+1]_96 chr3L:18821122-18821242 0.00059 70_[+1]_42 chr3L:12206007-12206127 0.00059 80_[+1]_32 chr3R:29202562-29202682 0.00059 88_[+1]_24 chr3L:16782908-16783028 0.00065 28_[+1]_84 chr2R:9039544-9039664 0.00071 108_[+1]_4 chr2L:1504416-1504536 0.00079 101_[+1]_11 chr3R:25023167-25023287 0.00079 26_[+1]_86 chrX:9273305-9273425 0.00087 31_[+1]_81 chrX:4627284-4627404 0.00087 31_[+1]_81 chrX:4647744-4647864 0.00087 26_[+1]_86 chrX:15769574-15769694 0.00087 28_[+1]_84 chrX:5695201-5695321 0.00087 60_[+1]_52 chr2L:9089674-9089794 0.00093 15_[+1]_97 chr3R:7643676-7643796 0.00093 34_[+1]_78 chr3R:20581518-20581638 0.00093 92_[+1]_20 chr2L:5526872-5526992 0.00093 102_[+1]_10 chrX:16783459-16783579 0.00093 59_[+1]_53 chr2R:17563500-17563620 0.001 83_[+1]_29 chr3R:27679126-27679246 0.001 13_[+1]_99 chr3R:21878654-21878774 0.001 95_[+1]_17 chr3L:16100157-16100277 0.001 43_[+1]_69 chrX:14226199-14226319 0.001 106_[+1]_6 chr2R:6041875-6041995 0.001 44_[+1]_68 chr3R:11429953-11430073 0.0011 20_[+1]_92 chrX:476872-476992 0.0012 93_[+1]_19 chr2L:2758281-2758401 0.0012 90_[+1]_22 chr2R:8435039-8435159 0.0012 39_[+1]_73 chr3R:25235514-25235634 0.0012 85_[+1]_27 chr2R:7961832-7961952 0.0013 68_[+1]_44 chr2L:5525801-5525921 0.0013 83_[+1]_29 chrX:10385077-10385197 0.0013 36_[+1]_76 chr3R:16651099-16651219 0.0013 85_[+1]_27 chr3R:5821389-5821509 0.0013 54_[+1]_58 chr2L:4830686-4830806 0.0014 65_[+1]_47 chrX:17924191-17924311 0.0015 104_[+1]_8 chr2L:11948587-11948707 0.0015 79_[+1]_33 chr3R:24922395-24922515 0.0015 77_[+1]_35 chr3R:22381235-22381355 0.0015 104_[+1]_8 chr2L:16326999-16327119 0.0015 86_[+1]_26 chr3R:27929674-27929794 0.0016 104_[+1]_8 chrX:20389699-20389819 0.0016 19_[+1]_93 chr3L:13040990-13041110 0.0019 52_[+1]_60 chr2R:8683012-8683132 0.0019 8_[+1]_104 chr2R:9822916-9823036 0.0019 21_[+1]_91 chr3R:9254961-9255081 0.002 71_[+1]_41 chr2R:11853147-11853267 0.0021 59_[+1]_53 chr2R:16957381-16957501 0.0021 76_[+1]_36 chrX:2170572-2170692 0.0021 50_[+1]_62 chr2R:9165607-9165727 0.0021 23_[+1]_89 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGCGCSMA width=8 seqs=194 chrX:8442313-8442433 ( 94) GGCGCCAA 1 chr2R:13205311-13205431 ( 45) GGCGCCAA 1 chr3L:20788109-20788229 ( 75) GGCGCCAA 1 chrX:5941925-5942045 ( 27) GGCGCCAA 1 chr2R:20319046-20319166 ( 10) GGCGCCAA 1 chr3L:20113197-20113317 ( 83) GGCGCCAA 1 chr3R:10767771-10767891 ( 108) GGCGCCAA 1 chr2L:1147719-1147839 ( 50) GGCGCCAA 1 chr2R:10557151-10557271 ( 23) GGCGCCAA 1 chr2L:2815826-2815946 ( 79) GGCGCCAA 1 chr2R:19502967-19503087 ( 4) GGCGCCAA 1 chr2R:24857337-24857457 ( 88) GGCGCCAA 1 chrX:336743-336863 ( 24) GGCGCCAA 1 chr2L:8040986-8041106 ( 17) GGCGCCAA 1 chrX:13194409-13194529 ( 82) GGCGCCAA 1 chr2R:13183904-13184024 ( 80) GGCGCCAA 1 chr3R:15147996-15148116 ( 31) GGCGCCAA 1 chr3L:16563505-16563625 ( 92) GGCGCCAA 1 chr3L:995806-995926 ( 83) GGCGCCAA 1 chr3L:8964642-8964762 ( 79) GGCGCCAA 1 chr2R:7709499-7709619 ( 91) GGCGCCAA 1 chr3L:16390924-16391044 ( 75) GGCGCCAA 1 chr2R:22332050-22332170 ( 61) GGCGCCAA 1 chr3L:10882770-10882890 ( 29) GGCGCCCA 1 chr3R:7902641-7902761 ( 93) GGCGCCCA 1 chrX:15841435-15841555 ( 47) GGCGCCCA 1 chrX:17629462-17629582 ( 107) GGCGCCCA 1 chr3L:8071783-8071903 ( 34) GGCGCCCA 1 chr2L:17433317-17433437 ( 72) GGCGCGAA 1 chr2R:12692677-12692797 ( 80) GGCGCGAA 1 chr2L:4979312-4979432 ( 67) GGCGCGAA 1 chr3R:8807233-8807353 ( 77) GGCGCGAA 1 chr2R:10729277-10729397 ( 89) GGCGCGAA 1 chr2R:11844184-11844304 ( 105) GGCGCGAA 1 chr3L:1756237-1756357 ( 30) CGCGCCAA 1 chr2R:24017218-24017338 ( 78) GGCGCGCA 1 chr3L:9974312-9974432 ( 32) CGCGCCAA 1 chr3R:7155145-7155265 ( 101) GGCGCGCA 1 chr2R:14526126-14526246 ( 61) CGCGCCAA 1 chr3R:18230381-18230501 ( 27) CGCGCCAA 1 chr2R:22080036-22080156 ( 40) GGCGCGCA 1 chrX:8129357-8129477 ( 28) GGCGCGCA 1 chr2L:15764135-15764255 ( 14) CGCGCCAA 1 chr3L:11728251-11728371 ( 19) CGCGCCAA 1 chrX:8265397-8265517 ( 95) GGCGCGCA 1 chrX:18410206-18410326 ( 81) GGCGCGCA 1 chr3L:17055457-17055577 ( 36) CGCGCCAA 1 chr3R:15786618-15786738 ( 24) CGCGCCAA 1 chr3L:3940392-3940512 ( 37) GGCGCGCA 1 chr3R:9754653-9754773 ( 93) CGCGCCAA 1 chr3R:24054277-24054397 ( 56) CGCGCCAA 1 chr3L:11062607-11062727 ( 91) CGCGCCAA 1 chr2R:12510790-12510910 ( 87) CGCGCCCA 1 chr2R:13414677-13414797 ( 93) CGCGCGAA 1 chr2L:20926061-20926181 ( 59) CGCGCGAA 1 chr2R:18705869-18705989 ( 21) GGCGCCTA 1 chr3R:8344324-8344444 ( 20) GCCGCCAA 1 chrX:20162710-20162830 ( 19) CGCGCGCA 1 chr3L:17035542-17035662 ( 16) GCCGCCAA 1 chr2L:20427531-20427651 ( 59) GCCGCCAA 1 chrX:646559-646679 ( 19) CGCGCGCA 1 chr3L:3457052-3457172 ( 93) GGCGCCAT 1 chr3L:19979809-19979929 ( 107) GGCGCGTA 1 chr2R:22073323-22073443 ( 44) GGCGCGTA 1 chr2L:6448479-6448599 ( 90) GGCGCGTA 1 chr2R:14427087-14427207 ( 10) GGCGCCAC 1 chr2R:23877614-23877734 ( 31) GGCGCCCT 1 chr3L:17027458-17027578 ( 68) GGCGCCAG 1 chr3L:21773998-21774118 ( 2) GGCGCCAG 1 chrX:16321206-16321326 ( 73) GCCGCGAA 1 chr2R:12923763-12923883 ( 24) CGCGCCTA 1 chr2R:24668308-24668428 ( 92) GGCGGGAA 1 chr3L:20028994-20029114 ( 89) GGCGCTAA 1 chr2R:14993817-14993937 ( 107) CGCGCCTA 1 chr2L:13790851-13790971 ( 64) GGCGCTAA 1 chr3L:13866927-13867047 ( 56) CGCGCCTA 1 chr2L:560351-560471 ( 89) GGCGCTAA 1 chr2R:23878324-23878444 ( 73) GGCGCCCG 1 chr2L:10483187-10483307 ( 38) GGCGGGAA 1 chr2L:14334037-14334157 ( 19) GGCGCCCG 1 chr2L:11269680-11269800 ( 53) CGCGCCTA 1 chr2R:8939816-8939936 ( 102) GGCGGGAA 1 chr3L:9824363-9824483 ( 41) GGCGCTAA 1 chr2L:8449524-8449644 ( 84) GGCGGGAA 1 chr2L:1502899-1503019 ( 92) CCCGCCAA 1 chr3R:27695147-27695267 ( 25) CCCGCCAA 1 chrX:11615782-11615902 ( 46) AGCGCCAA 1 chrX:14603942-14604062 ( 34) CCCGCCAA 1 chr3L:20541132-20541252 ( 106) CCCGCCAA 1 chr2R:21560106-21560226 ( 85) CCCGCCAA 1 chrX:14603690-14603810 ( 48) CCCGCCAA 1 chr3R:29503901-29504021 ( 96) GGCGCGCT 1 chr2R:17493332-17493452 ( 70) GGCGCGCT 1 chr2R:8167850-8167970 ( 32) CGCGCCAT 1 chrX:19520511-19520631 ( 83) GGCGCTCA 1 chr3L:7094204-7094324 ( 102) GGCGCGCC 1 chr3R:10815180-10815300 ( 36) CGCGCCAC 1 chrX:13211913-13212033 ( 75) GGCGCGCG 1 chrX:11459416-11459536 ( 70) CGCGGCCA 1 chr3R:23053466-23053586 ( 54) AGCGCGAA 1 chrX:5323776-5323896 ( 76) CCCGCGAA 1 chr2R:13552422-13552542 ( 83) AGCGCGAA 1 chr3R:8561654-8561774 ( 46) CGCGGGAA 1 chr2R:11442361-11442481 ( 107) TGCGCCAA 1 chr2L:19484665-19484785 ( 86) GCCGCCTA 1 chr2R:8170162-8170282 ( 66) CCCGCGCA 1 chrX:8461210-8461330 ( 13) AGCGCGCA 1 chr2L:16261726-16261846 ( 7) GGCGCCTT 1 chr2R:12521324-12521444 ( 33) GGCGCCTT 1 chrX:15732035-15732155 ( 26) GGCGCCTT 1 chr2L:11282019-11282139 ( 4) CCCGCGCA 1 chr2R:20870686-20870806 ( 24) AGCGCGCA 1 chr3R:19642727-19642847 ( 51) AGCGCGCA 1 chr2L:292333-292453 ( 33) CCCGCGCA 1 chr3L:12732883-12733003 ( 33) GGCGCCTT 1 chr3R:18385721-18385841 ( 8) CGCGCTCA 1 chr3L:4277879-4277999 ( 11) CGCGCTCA 1 chr3L:21210071-21210191 ( 42) GGCGCACA 1 chrX:17106295-17106415 ( 7) CGCGCGAC 1 chr3R:18572968-18573088 ( 21) CGCGCGCT 1 chrX:11459027-11459147 ( 17) GCCGCCAT 1 chr2L:3785555-3785675 ( 41) TGCGCCCA 1 chr2L:811492-811612 ( 106) GCCGGCAA 1 chr3L:4510452-4510572 ( 16) CGCGCTCA 1 chr3R:17040132-17040252 ( 45) GCCGCCAC 1 chr3L:1735751-1735871 ( 73) GGCGGCAC 1 chr2L:9968499-9968619 ( 93) GGCGCGTT 1 chr3L:3461248-3461368 ( 61) GCCGCTAA 1 chrX:11621405-11621525 ( 15) TGCGCGCA 1 chr3L:5897398-5897518 ( 2) CGCGCAAA 1 chr3R:15839470-15839590 ( 17) GCCGGGAA 1 chr3R:29993374-29993494 ( 76) GGCGGGAT 1 chr3R:15367649-15367769 ( 83) GGCGCGTC 1 chr2L:106707-106827 ( 80) GGCGCGTG 1 chr3L:3947413-3947533 ( 26) GGCGGTAA 1 chr2R:19390003-19390123 ( 33) ACCGCCAA 1 chr2L:9920072-9920192 ( 49) GGCGGCCG 1 chrX:8443081-8443201 ( 48) GGCGCGTC 1 chr2R:19122099-19122219 ( 69) ACCGCCAA 1 chr3L:16495360-16495480 ( 84) ACCGCCAA 1 chr2L:8400335-8400455 ( 96) CGCGGCTA 1 chr3R:22380028-22380148 ( 27) CGCGCCTT 1 chr3L:8623866-8623986 ( 100) GGCGGTAA 1 chr3L:8180818-8180938 ( 29) GGCGGGAG 1 chr2R:22870948-22871068 ( 17) ACCGCCCA 1 chr3L:18821122-18821242 ( 71) GGCGGGAC 1 chr3L:12206007-12206127 ( 81) GGCGGGCT 1 chr3R:29202562-29202682 ( 89) CGCGGCAT 1 chr3L:16782908-16783028 ( 29) CCCGCCAC 1 chr2R:9039544-9039664 ( 109) CGCGGCAG 1 chr2L:1504416-1504536 ( 102) TCCGCCAA 1 chr3R:25023167-25023287 ( 27) AGCGGGAA 1 chrX:9273305-9273425 ( 32) CGCGGCCC 1 chrX:4627284-4627404 ( 32) GGCGGAAA 1 chrX:4647744-4647864 ( 27) GCCGCCTT 1 chrX:15769574-15769694 ( 29) ACCGCGCA 1 chrX:5695201-5695321 ( 61) TGCGGCAA 1 chr2L:9089674-9089794 ( 16) GGCGGCTT 1 chr3R:7643676-7643796 ( 35) AGCGCGAC 1 chr3R:20581518-20581638 ( 93) AGCGCGAG 1 chr2L:5526872-5526992 ( 103) GCCGCACA 1 chrX:16783459-16783579 ( 60) AGCGCGAC 1 chr2R:17563500-17563620 ( 84) CGCGGTCA 1 chr3R:27679126-27679246 ( 14) CGCGGGCT 1 chr3R:21878654-21878774 ( 96) TGCGCGTA 1 chr3L:16100157-16100277 ( 44) CGCGGGCT 1 chrX:14226199-14226319 ( 107) GCCGCCTG 1 chr2R:6041875-6041995 ( 45) GGCGCACT 1 chr3R:11429953-11430073 ( 21) TGCGCGAT 1 chrX:476872-476992 ( 94) GGCGCTTT 1 chr2L:2758281-2758401 ( 91) AGCGCAAA 1 chr2R:8435039-8435159 ( 40) CCCGCAAA 1 chr3R:25235514-25235634 ( 86) GGCGGTTA 1 chr2R:7961832-7961952 ( 69) TGCGCGAC 1 chr2L:5525801-5525921 ( 84) TGCGCTCA 1 chrX:10385077-10385197 ( 37) TGCGCGAC 1 chr3R:16651099-16651219 ( 86) TGCGCGAG 1 chr3R:5821389-5821509 ( 55) GCCGCTAT 1 chr2L:4830686-4830806 ( 66) GGCGGTAT 1 chrX:17924191-17924311 ( 105) CGCGCACT 1 chr2L:11948587-11948707 ( 80) AGCGCCTC 1 chr3R:24922395-24922515 ( 78) AGCGCCTG 1 chr3R:22381235-22381355 ( 105) CGCGGCTG 1 chr2L:16326999-16327119 ( 87) ACCGGCCA 1 chr3R:27929674-27929794 ( 105) GCCGGGCG 1 chrX:20389699-20389819 ( 20) CCCGCTTA 1 chr3L:13040990-13041110 ( 53) TGCGCACA 1 chr2R:8683012-8683132 ( 9) AGCGGTAA 1 chr2R:9822916-9823036 ( 22) CCCGCGTG 1 chr3R:9254961-9255081 ( 72) GCCGGCTT 1 chr2R:11853147-11853267 ( 60) GCCGGACA 1 chr2R:16957381-16957501 ( 77) AGCGGTCA 1 chrX:2170572-2170692 ( 51) CCCGCTCT 1 chr2R:9165607-9165727 ( 24) GCCGCACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.28951 E= 1.8e-114 -148 51 149 -230 -1424 5 203 -1424 -1424 232 -1424 -1424 -1424 -1424 237 -1424 -1424 203 -6 -1424 -241 132 79 -150 87 53 -1424 -93 119 -128 -123 -103 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 194 E= 1.8e-114 0.108247 0.283505 0.546392 0.061856 0.000000 0.206186 0.793814 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.814433 0.185567 0.000000 0.056701 0.500000 0.335052 0.108247 0.551546 0.288660 0.000000 0.159794 0.685567 0.082474 0.082474 0.149485 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGCGCSMA MEME-1 regular expression -------------------------------------------------------------------------------- [GC][GC]CGC[CG][AC]A -------------------------------------------------------------------------------- Time 7.38 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-2 width = 8 sites = 98 llr = 842 E-value = 2.1e-072 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 39:::a:7 pos.-specific C :::a:::: probability G 1:::a::: matrix T 71a:::a2 bits 2.4 ** 2.1 ** 1.9 ** 1.7 ***** Relative 1.4 ***** Entropy 1.2 ****** (12.4 bits) 0.9 ****** 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:12923763-12923883 50 3.00e-05 AATAGCTGCC TATCGATA CAATTTTCGA chr2R:7516329-7516449 67 3.00e-05 AATAATTATG TATCGATA GACTATTCGA chr3R:22381235-22381355 64 3.00e-05 TCGGACTGTT TATCGATA GGCTAGAGGC chrX:10385077-10385197 53 3.00e-05 ACCTATCGCC TATCGATA TTAGATGCAT chrX:3174984-3175104 2 3.00e-05 T TATCGATA TGTATCTTGA chrX:8461210-8461330 40 3.00e-05 GTTCCACACT TATCGATA ACACGTCGAT chr3L:15576514-15576634 63 3.00e-05 GACACTCAGT TATCGATA AAAAATTGCC chr3R:16651099-16651219 68 3.00e-05 TCCCTGAGTC TATCGATA GTTTTCCCAG chr3R:7643676-7643796 63 3.00e-05 GATAACGCGC TATCGATA TCTCAGGGGT chr2L:4830686-4830806 5 3.00e-05 GGCC TATCGATA TCGGGGGCGT chrX:15841435-15841555 103 3.00e-05 ccccaatatc tatcgata tcccagaaaa chr3L:7094204-7094324 69 3.00e-05 GATAGAAAAC TATCGATA TCTATTTAAC chr2R:18710820-18710940 49 3.00e-05 TTTTTTCGTA TATCGATA AGTTAAGGTG chr2L:560351-560471 64 3.00e-05 TTGGATAAAA TATCGATA AGCAGTGCCT chrX:13211913-13212033 64 3.00e-05 CACACAAGAC TATCGATA AATGGCGCGC chrX:1865793-1865913 51 3.00e-05 CGTTCATCGT TATCGATA GACTATTTGA chr2R:12510790-12510910 18 3.00e-05 TAGGGCCAAC TATCGATA ACTATCGCAC chr3R:15367649-15367769 70 3.00e-05 GCATATTATT TATCGATA ACTTGGGCGC chrX:8129357-8129477 75 3.00e-05 AATGCGCATG TATCGATA TTTTGCGATC chr2R:7712018-7712138 51 3.00e-05 AGCAATTATT TATCGATA AGACGGCAAA chr2L:1147719-1147839 72 3.00e-05 CAGAGTCCGT TATCGATA TTCCGGCAGA chr2L:10483187-10483307 81 3.00e-05 AGTTGGTTCT TATCGATA ACGGACGGGG chr3R:19642727-19642847 39 3.00e-05 CTCGATAATA TATCGATA ACTGAGCGCG chr2R:10557151-10557271 33 3.00e-05 GGCGCCAACA TATCGATA ATATATAATG chr3L:17035542-17035662 88 3.00e-05 GCATTACAGT TATCGATA TGATCTACTT chrX:6687413-6687533 61 3.00e-05 TTGCATGCGT TATCGATA TCGCCTGCCA chr3L:5897398-5897518 31 3.00e-05 TGTTGTCAAT TATCGATA TCTATGTGCA chrX:5695201-5695321 1 3.00e-05 . TATCGATA TTGGCCAGGT chr2R:19122099-19122219 57 3.00e-05 TATCGTTAGT TATCGATA GTTGACCGCC chr3L:8534545-8534665 52 3.00e-05 GCATTTGcga tatcgata taaaatctac chr3L:3940392-3940512 14 3.00e-05 GAAAAACACT TATCGATA GCTTGATAGT chr2L:9968499-9968619 57 3.00e-05 CCCGTGTTGC TATCGATA AGTAGCTTTG chr2R:8939816-8939936 84 3.00e-05 CACCCACTGA TATCGATA GCATGCAATT chr3R:22380028-22380148 37 3.00e-05 CGCGCCTTGT TATCGATA ACCAGTATTT chr3R:29202562-29202682 72 3.00e-05 CTGGAAAACC TATCGATA AATAAAAAGC chr2R:8167850-8167970 42 3.00e-05 CGCGCCATGA TATCGATA AAAATCGATT chr3L:16390924-16391044 64 3.00e-05 TGGCTTGGTC TATCGATA AATGGCGCCA chr3R:24922395-24922515 47 3.00e-05 ATTTTTCGTT TATCGATA CCAGTTAGTG chr2R:9165607-9165727 81 3.00e-05 GATAGTTCGA TATCGATA CGTTGTTGAA chr3L:18865541-18865661 38 5.96e-05 TGATTGTGCC AATCGATA TCGTTGGACT chr3R:8217870-8217990 52 5.96e-05 TCTTCTGCGT AATCGATA TGAATAGATA chr3R:9254961-9255081 41 5.96e-05 AATTCTGTTA AATCGATA GTTGCCGAGT chr3R:27929674-27929794 44 5.96e-05 TCATCCTGCC AATCGATA ACAATCCTGA chr2L:8305500-8305620 34 5.96e-05 TTATGCATAA AATCGATA TTTCAGTTTG chr2L:8220691-8220811 43 5.96e-05 ACTAGCGAAT AATCGATA ACACGCAGCT chrX:11615782-11615902 71 5.96e-05 CGAGCGTGCT AATCGATA ATAAAATTGC chr2L:11282019-11282139 68 5.96e-05 CTTAATGAAG AATCGATA TTTAATCGAT chr3L:11728251-11728371 32 5.96e-05 GCCAAAAATC AATCGATA TCCATTGATC chr3R:21878654-21878774 40 5.96e-05 GCTGTTCTGC AATCGATA ATCGACATAC chr2L:20427531-20427651 69 5.96e-05 GCCGCCAAAT AATCGATA TTCGATTGGT chr2R:13552422-13552542 45 5.96e-05 TCGATTAAAT AATCGATA GCATCGATTT chr2R:17786038-17786158 35 5.96e-05 TTGATAGCTT AATCGATA ACGTTTGCGA chr3L:8964642-8964762 60 5.96e-05 CTGAGGAGAT AATCGATA TACGGCTTAT chr2R:22332050-22332170 50 5.96e-05 GAACCCGCCG AATCGATA GCTGGCGCCA chr2R:7793543-7793663 56 5.96e-05 AAAAAGCAAC AATCGATA GATCGATACT chr3L:1333114-1333234 68 5.96e-05 ATCTATCGGA AATCGATA ACGCAAGCTG chr2R:7961832-7961952 79 9.01e-05 TGCGCGACTA TATCGATT AAAGCAGCTT chr3R:23053466-23053586 82 9.01e-05 AGCCAATGTT TATCGATT GGAGCGCGTG chr2L:5525801-5525921 67 9.01e-05 TCTTATCGTT TATCGATT GCCCTGCATT chr3L:20028994-20029114 80 9.01e-05 ACATACTTGT TATCGATT AGGCGCTAAA chr2R:18705869-18705989 35 9.01e-05 CCTACTTCGA TATCGATT ACCGACAGTT chrX:11621405-11621525 76 9.01e-05 GAGTTTGAAC TATCGATT ATAATCGATT chrX:15732035-15732155 108 9.01e-05 CGATCGACAT TATCGATT GTGAC chr2R:11841506-11841626 13 9.01e-05 CCTATCAATA TATCGATT GTTCAGTATA chr2L:14334037-14334157 48 9.01e-05 TTCCCCACGC TATCGATT GGTCTATCCC chr2L:5526872-5526992 47 9.01e-05 CTTCTTTGCC TATCGATT GTCTGTGATT chr2R:9822916-9823036 102 9.01e-05 ATAGCACGCT TATCGATT TCATTTACAG chr2L:8400335-8400455 34 9.01e-05 TCGCTCTGCT TATCGATT ATTCGATTAC chr3L:8623866-8623986 79 9.01e-05 TCTCTGCGAC TATCGATT TTTGAGTGCA chr3L:17027458-17027578 14 9.01e-05 AATTACGCGG TATCGATT GATAAACTTA chr3L:19913905-19914025 63 1.51e-04 ATCGCAGAAA AATCGATT GCCGAAGTGT chr2R:23843259-23843379 73 1.51e-04 AGCTTTAGCG AATCGATT GGTCGCTGTT chrX:15572098-15572218 65 1.51e-04 GGGAAATACA AATCGATT AGTGCTATCG chr2R:17670005-17670125 9 1.51e-04 AATTCAAA TTTCGATA GCACGTTCAG chrX:9273305-9273425 8 1.51e-04 TTTTATT TTTCGATA ATCTTTAAGA chr3L:20788109-20788229 11 1.51e-04 TTTGATGGTT TTTCGATA GGCTTTCAGG chr3R:5821389-5821509 93 1.51e-04 ATCGATGACA AATCGATT ATAATTTTTT chrX:8240552-8240672 59 1.51e-04 TACCGATAGT TTTCGATA GACTAAATTG chrX:20389699-20389819 41 1.51e-04 GATTGCCATC TTTCGATA ACGATTGGCG chrX:17629462-17629582 78 1.51e-04 AAATATACCA AATCGATT AAAGCTTGGA chr3L:1331664-1331784 11 1.51e-04 TAAATTTAAA TTTCGATA GAAACGTTGG chr3L:19913700-19913820 39 1.51e-04 TTTTTGTATA TTTCGATA TTTTATACCG chr2R:11844184-11844304 43 1.51e-04 AGCTAATCGC AATCGATT GCAGAACTTA chr3L:12206007-12206127 67 1.51e-04 GTTACCGATG AATCGATT ACTTTTGGCG chr3L:12732883-12733003 105 1.51e-04 CAATTTGACA TTTCGATA TATTATCG chrX:476872-476992 61 1.70e-04 CCGCAAATTC GATCGATA GACGATAAAA chr2R:24017218-24017338 61 1.70e-04 CAGACTGTGA GATCGATA ACGATAGATG chr3R:10052830-10052950 88 1.70e-04 CTTCAATCAC GATCGATA GGAAATTAAT chr3L:17055457-17055577 59 1.70e-04 CGACGACTGC GATCGATA GCAGCGCGGA chr2L:19484665-19484785 78 1.70e-04 AAAAAAAATC GATCGATA GCCGCCTAAT chrX:2344642-2344762 46 1.89e-04 ACAGCGCAGT TATCGATG TTACGACCTA chrX:8443081-8443201 9 1.89e-04 TCCACACC TATCGATG AATGCAGTCC chr2R:6041875-6041995 64 1.89e-04 TCAGAATGAC TATCGATG TATGCATTAC chrX:7066787-7066907 113 2.19e-04 CGAATATGGT ATTCGATA chr2L:9920072-9920192 34 2.19e-04 AGTTGATTGT ATTCGATA ATTAAACGGC chrX:4647744-4647864 106 2.39e-04 CCATGCTGCC CATCGATA GGCAACT chr3R:15839470-15839590 54 2.39e-04 CCGGGGAGTT CATCGATA AATATGTAGT chr3L:13040990-13041110 17 2.69e-04 TTCGTTTAAA TTTCGATT GCTTGTGTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:12923763-12923883 3e-05 49_[+2]_63 chr2R:7516329-7516449 3e-05 66_[+2]_46 chr3R:22381235-22381355 3e-05 63_[+2]_49 chrX:10385077-10385197 3e-05 52_[+2]_60 chrX:3174984-3175104 3e-05 1_[+2]_111 chrX:8461210-8461330 3e-05 39_[+2]_73 chr3L:15576514-15576634 3e-05 62_[+2]_50 chr3R:16651099-16651219 3e-05 67_[+2]_45 chr3R:7643676-7643796 3e-05 62_[+2]_50 chr2L:4830686-4830806 3e-05 4_[+2]_108 chrX:15841435-15841555 3e-05 102_[+2]_10 chr3L:7094204-7094324 3e-05 68_[+2]_44 chr2R:18710820-18710940 3e-05 48_[+2]_64 chr2L:560351-560471 3e-05 63_[+2]_49 chrX:13211913-13212033 3e-05 63_[+2]_49 chrX:1865793-1865913 3e-05 50_[+2]_62 chr2R:12510790-12510910 3e-05 17_[+2]_95 chr3R:15367649-15367769 3e-05 69_[+2]_43 chrX:8129357-8129477 3e-05 74_[+2]_38 chr2R:7712018-7712138 3e-05 50_[+2]_62 chr2L:1147719-1147839 3e-05 71_[+2]_41 chr2L:10483187-10483307 3e-05 80_[+2]_32 chr3R:19642727-19642847 3e-05 38_[+2]_74 chr2R:10557151-10557271 3e-05 32_[+2]_80 chr3L:17035542-17035662 3e-05 87_[+2]_25 chrX:6687413-6687533 3e-05 60_[+2]_52 chr3L:5897398-5897518 3e-05 30_[+2]_82 chrX:5695201-5695321 3e-05 [+2]_112 chr2R:19122099-19122219 3e-05 56_[+2]_56 chr3L:8534545-8534665 3e-05 51_[+2]_61 chr3L:3940392-3940512 3e-05 13_[+2]_99 chr2L:9968499-9968619 3e-05 56_[+2]_56 chr2R:8939816-8939936 3e-05 83_[+2]_29 chr3R:22380028-22380148 3e-05 36_[+2]_76 chr3R:29202562-29202682 3e-05 71_[+2]_41 chr2R:8167850-8167970 3e-05 41_[+2]_71 chr3L:16390924-16391044 3e-05 63_[+2]_49 chr3R:24922395-24922515 3e-05 46_[+2]_66 chr2R:9165607-9165727 3e-05 80_[+2]_32 chr3L:18865541-18865661 6e-05 37_[+2]_75 chr3R:8217870-8217990 6e-05 51_[+2]_61 chr3R:9254961-9255081 6e-05 40_[+2]_72 chr3R:27929674-27929794 6e-05 43_[+2]_69 chr2L:8305500-8305620 6e-05 33_[+2]_79 chr2L:8220691-8220811 6e-05 42_[+2]_70 chrX:11615782-11615902 6e-05 70_[+2]_42 chr2L:11282019-11282139 6e-05 67_[+2]_45 chr3L:11728251-11728371 6e-05 31_[+2]_81 chr3R:21878654-21878774 6e-05 39_[+2]_73 chr2L:20427531-20427651 6e-05 68_[+2]_44 chr2R:13552422-13552542 6e-05 44_[+2]_68 chr2R:17786038-17786158 6e-05 34_[+2]_78 chr3L:8964642-8964762 6e-05 59_[+2]_53 chr2R:22332050-22332170 6e-05 49_[+2]_63 chr2R:7793543-7793663 6e-05 55_[+2]_57 chr3L:1333114-1333234 6e-05 67_[+2]_45 chr2R:7961832-7961952 9e-05 78_[+2]_34 chr3R:23053466-23053586 9e-05 81_[+2]_31 chr2L:5525801-5525921 9e-05 66_[+2]_46 chr3L:20028994-20029114 9e-05 79_[+2]_33 chr2R:18705869-18705989 9e-05 34_[+2]_78 chrX:11621405-11621525 9e-05 75_[+2]_37 chrX:15732035-15732155 9e-05 107_[+2]_5 chr2R:11841506-11841626 9e-05 12_[+2]_100 chr2L:14334037-14334157 9e-05 47_[+2]_65 chr2L:5526872-5526992 9e-05 46_[+2]_66 chr2R:9822916-9823036 9e-05 101_[+2]_11 chr2L:8400335-8400455 9e-05 33_[+2]_79 chr3L:8623866-8623986 9e-05 78_[+2]_34 chr3L:17027458-17027578 9e-05 13_[+2]_99 chr3L:19913905-19914025 0.00015 62_[+2]_50 chr2R:23843259-23843379 0.00015 72_[+2]_40 chrX:15572098-15572218 0.00015 64_[+2]_48 chr2R:17670005-17670125 0.00015 8_[+2]_104 chrX:9273305-9273425 0.00015 7_[+2]_105 chr3L:20788109-20788229 0.00015 10_[+2]_102 chr3R:5821389-5821509 0.00015 92_[+2]_20 chrX:8240552-8240672 0.00015 58_[+2]_54 chrX:20389699-20389819 0.00015 40_[+2]_72 chrX:17629462-17629582 0.00015 77_[+2]_35 chr3L:1331664-1331784 0.00015 10_[+2]_102 chr3L:19913700-19913820 0.00015 38_[+2]_74 chr2R:11844184-11844304 0.00015 42_[+2]_70 chr3L:12206007-12206127 0.00015 66_[+2]_46 chr3L:12732883-12733003 0.00015 104_[+2]_8 chrX:476872-476992 0.00017 60_[+2]_52 chr2R:24017218-24017338 0.00017 60_[+2]_52 chr3R:10052830-10052950 0.00017 87_[+2]_25 chr3L:17055457-17055577 0.00017 58_[+2]_54 chr2L:19484665-19484785 0.00017 77_[+2]_35 chrX:2344642-2344762 0.00019 45_[+2]_67 chrX:8443081-8443201 0.00019 8_[+2]_104 chr2R:6041875-6041995 0.00019 63_[+2]_49 chrX:7066787-7066907 0.00022 112_[+2] chr2L:9920072-9920192 0.00022 33_[+2]_79 chrX:4647744-4647864 0.00024 105_[+2]_7 chr3R:15839470-15839590 0.00024 53_[+2]_59 chr3L:13040990-13041110 0.00027 16_[+2]_96 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=98 chr2R:12923763-12923883 ( 50) TATCGATA 1 chr2R:7516329-7516449 ( 67) TATCGATA 1 chr3R:22381235-22381355 ( 64) TATCGATA 1 chrX:10385077-10385197 ( 53) TATCGATA 1 chrX:3174984-3175104 ( 2) TATCGATA 1 chrX:8461210-8461330 ( 40) TATCGATA 1 chr3L:15576514-15576634 ( 63) TATCGATA 1 chr3R:16651099-16651219 ( 68) TATCGATA 1 chr3R:7643676-7643796 ( 63) TATCGATA 1 chr2L:4830686-4830806 ( 5) TATCGATA 1 chrX:15841435-15841555 ( 103) TATCGATA 1 chr3L:7094204-7094324 ( 69) TATCGATA 1 chr2R:18710820-18710940 ( 49) TATCGATA 1 chr2L:560351-560471 ( 64) TATCGATA 1 chrX:13211913-13212033 ( 64) TATCGATA 1 chrX:1865793-1865913 ( 51) TATCGATA 1 chr2R:12510790-12510910 ( 18) TATCGATA 1 chr3R:15367649-15367769 ( 70) TATCGATA 1 chrX:8129357-8129477 ( 75) TATCGATA 1 chr2R:7712018-7712138 ( 51) TATCGATA 1 chr2L:1147719-1147839 ( 72) TATCGATA 1 chr2L:10483187-10483307 ( 81) TATCGATA 1 chr3R:19642727-19642847 ( 39) TATCGATA 1 chr2R:10557151-10557271 ( 33) TATCGATA 1 chr3L:17035542-17035662 ( 88) TATCGATA 1 chrX:6687413-6687533 ( 61) TATCGATA 1 chr3L:5897398-5897518 ( 31) TATCGATA 1 chrX:5695201-5695321 ( 1) TATCGATA 1 chr2R:19122099-19122219 ( 57) TATCGATA 1 chr3L:8534545-8534665 ( 52) TATCGATA 1 chr3L:3940392-3940512 ( 14) TATCGATA 1 chr2L:9968499-9968619 ( 57) TATCGATA 1 chr2R:8939816-8939936 ( 84) TATCGATA 1 chr3R:22380028-22380148 ( 37) TATCGATA 1 chr3R:29202562-29202682 ( 72) TATCGATA 1 chr2R:8167850-8167970 ( 42) TATCGATA 1 chr3L:16390924-16391044 ( 64) TATCGATA 1 chr3R:24922395-24922515 ( 47) TATCGATA 1 chr2R:9165607-9165727 ( 81) TATCGATA 1 chr3L:18865541-18865661 ( 38) AATCGATA 1 chr3R:8217870-8217990 ( 52) AATCGATA 1 chr3R:9254961-9255081 ( 41) AATCGATA 1 chr3R:27929674-27929794 ( 44) AATCGATA 1 chr2L:8305500-8305620 ( 34) AATCGATA 1 chr2L:8220691-8220811 ( 43) AATCGATA 1 chrX:11615782-11615902 ( 71) AATCGATA 1 chr2L:11282019-11282139 ( 68) AATCGATA 1 chr3L:11728251-11728371 ( 32) AATCGATA 1 chr3R:21878654-21878774 ( 40) AATCGATA 1 chr2L:20427531-20427651 ( 69) AATCGATA 1 chr2R:13552422-13552542 ( 45) AATCGATA 1 chr2R:17786038-17786158 ( 35) AATCGATA 1 chr3L:8964642-8964762 ( 60) AATCGATA 1 chr2R:22332050-22332170 ( 50) AATCGATA 1 chr2R:7793543-7793663 ( 56) AATCGATA 1 chr3L:1333114-1333234 ( 68) AATCGATA 1 chr2R:7961832-7961952 ( 79) TATCGATT 1 chr3R:23053466-23053586 ( 82) TATCGATT 1 chr2L:5525801-5525921 ( 67) TATCGATT 1 chr3L:20028994-20029114 ( 80) TATCGATT 1 chr2R:18705869-18705989 ( 35) TATCGATT 1 chrX:11621405-11621525 ( 76) TATCGATT 1 chrX:15732035-15732155 ( 108) TATCGATT 1 chr2R:11841506-11841626 ( 13) TATCGATT 1 chr2L:14334037-14334157 ( 48) TATCGATT 1 chr2L:5526872-5526992 ( 47) TATCGATT 1 chr2R:9822916-9823036 ( 102) TATCGATT 1 chr2L:8400335-8400455 ( 34) TATCGATT 1 chr3L:8623866-8623986 ( 79) TATCGATT 1 chr3L:17027458-17027578 ( 14) TATCGATT 1 chr3L:19913905-19914025 ( 63) AATCGATT 1 chr2R:23843259-23843379 ( 73) AATCGATT 1 chrX:15572098-15572218 ( 65) AATCGATT 1 chr2R:17670005-17670125 ( 9) TTTCGATA 1 chrX:9273305-9273425 ( 8) TTTCGATA 1 chr3L:20788109-20788229 ( 11) TTTCGATA 1 chr3R:5821389-5821509 ( 93) AATCGATT 1 chrX:8240552-8240672 ( 59) TTTCGATA 1 chrX:20389699-20389819 ( 41) TTTCGATA 1 chrX:17629462-17629582 ( 78) AATCGATT 1 chr3L:1331664-1331784 ( 11) TTTCGATA 1 chr3L:19913700-19913820 ( 39) TTTCGATA 1 chr2R:11844184-11844304 ( 43) AATCGATT 1 chr3L:12206007-12206127 ( 67) AATCGATT 1 chr3L:12732883-12733003 ( 105) TTTCGATA 1 chrX:476872-476992 ( 61) GATCGATA 1 chr2R:24017218-24017338 ( 61) GATCGATA 1 chr3R:10052830-10052950 ( 88) GATCGATA 1 chr3L:17055457-17055577 ( 59) GATCGATA 1 chr2L:19484665-19484785 ( 78) GATCGATA 1 chrX:2344642-2344762 ( 46) TATCGATG 1 chrX:8443081-8443201 ( 9) TATCGATG 1 chr2R:6041875-6041995 ( 64) TATCGATG 1 chrX:7066787-7066907 ( 113) ATTCGATA 1 chr2L:9920072-9920192 ( 34) ATTCGATA 1 chrX:4647744-4647864 ( 106) CATCGATA 1 chr3R:15839470-15839590 ( 54) CATCGATA 1 chr3L:13040990-13041110 ( 17) TTTCGATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.2854 E= 2.1e-072 -18 -329 -193 112 156 -1326 -1326 -144 -1326 -1326 -1326 171 -1326 232 -1326 -1326 -1326 -1326 237 -1326 173 -1326 -1326 -1326 -1326 -1326 -1326 171 131 -1326 -266 -44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 98 E= 2.1e-072 0.265306 0.020408 0.051020 0.663265 0.887755 0.000000 0.000000 0.112245 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.744898 0.000000 0.030612 0.224490 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 regular expression -------------------------------------------------------------------------------- [TA]ATCGAT[AT] -------------------------------------------------------------------------------- Time 13.30 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTRAAWT MEME-3 width = 8 sites = 186 llr = 1242 E-value = 2.0e-071 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::6aa42 pos.-specific C ::3:::1: probability G :::4:::1 matrix T aa7:::47 bits 2.4 2.1 1.9 1.7 ** ** Relative 1.4 ** ** Entropy 1.2 ** ** (9.6 bits) 0.9 ****** 0.7 ****** 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel TTTAAATT consensus CG AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:23053466-23053586 101 4.64e-05 GAGCGCGTGT TTTGAATT TGCTCACCCC chrX:476872-476992 33 4.64e-05 CCAGAAACAT TTTGAATT TTCCGCCTAA chrX:4647744-4647864 39 4.64e-05 CGCCTTTGCA TTTGAATT GTATCGCTTA chr3L:13866927-13867047 112 4.64e-05 GGCGCGATAA TTTGAATT A chr2L:8220691-8220811 94 4.64e-05 TGCGATCGAA TTTGAATT GCGAAAATGA chr3R:9748026-9748146 60 4.64e-05 AGAACCATCA TTTGAATT TCGCAGGCAT chr2L:16261726-16261846 94 4.64e-05 GACGCTCTAG TTTGAATT TAAATTGCTT chrX:15769574-15769694 20 4.64e-05 TATATTCAAA TTTGAATT AACCGCGCAG chr2R:22870948-22871068 8 4.64e-05 CGAGTTA TTTGAATT TACCGCCCAG chr3L:20113197-20113317 100 4.64e-05 AGCAAATAAG TTTGAATT TATTGGCAAT chr3L:3947413-3947533 17 4.64e-05 GATGCGGGAT TTTGAATT TGGCGGTAAG chrX:8265397-8265517 104 4.64e-05 CGGCGCGCAA TTTGAATT AATTGCTAG chr3R:11429953-11430073 32 4.64e-05 GCGCGATATT TTTGAATT CTTGGGGCGA chr3R:7973190-7973310 18 4.64e-05 ACACAAGACC TTTGAATT TGAATTTTGA chr2R:10729277-10729397 73 4.64e-05 CAGGGGTTCA TTTGAATT TATTCGTGGG chr2R:16240708-16240828 112 4.64e-05 GGCTAATTGG TTTGAATT T chrX:5695201-5695321 89 4.64e-05 TAAGTGGTCA TTTGAATT CTGCGGTTGC chrX:646559-646679 74 4.64e-05 ataagtcctg tttgaatt gcaaaaaact chr3L:8534545-8534665 28 4.64e-05 AACAAGATCT TTTGAATT TGGTGGGCAT chr2L:3785555-3785675 12 4.64e-05 TTTAAAGACA TTTGAATT TTTTCGAACT chr3L:16782908-16783028 41 4.64e-05 CGCCACTCAG TTTGAATT TCGAATGATT chr3R:9754653-9754773 84 4.64e-05 TATCGGTTAT TTTGAATT GCGCGCCAAG chr2R:6041875-6041995 30 4.64e-05 TAGTACAACA TTTGAATT TGAAAATGGC chr2R:7793543-7793663 96 4.64e-05 GTCACTCTAG TTTGAATT GAATTGACAA chr3R:24922395-24922515 2 4.64e-05 T TTTGAATT TAGGGGTAAA chr3L:4510452-4510572 7 4.64e-05 TTTTCT TTTGAATT GCGCGCTCAG chrX:15572098-15572218 94 1.64e-04 CGTTTCATAA TTTGAAAT TTATTTTTAT chr2L:1502899-1503019 107 1.64e-04 CAATATGACA TTTAAATT AGGATA chr2R:13415045-13415165 16 1.64e-04 AATATGTTTT TTTGAAAT TCACAATAAT chr3R:8343478-8343598 83 1.64e-04 ACATATGTAC TTTGAAAT GAAAGTGGTT chr3R:8344324-8344444 10 1.64e-04 ATTGGAGTT TTTAAATT ATGCCGCCAA chr2R:11853147-11853267 99 1.64e-04 TTAGTCCGAG TTTGAAAT CTTCAGGGAA chr3R:27929674-27929794 4 1.64e-04 TAT TTTAAATT AAATACTCGT chrX:4627284-4627404 23 1.64e-04 CAACGGAACT TTTAAATT TGGCGGAAAA chr2L:4830686-4830806 103 1.64e-04 ACCAGCGGCT TTTGAAAT ATTATTTGAA chrX:15841435-15841555 70 1.64e-04 ttgaacaatt tttaaatt ttttctcatc chr2R:8683012-8683132 76 1.64e-04 GAATATCTGG TTTGAAAT CGAGTTTTTC chrX:15732035-15732155 38 1.64e-04 CGCCTTTCAA TTTGAAAT TCGATTCTAT chr2R:22080036-22080156 18 1.64e-04 TAGTACACAA TTTAAATT CAAATCTTTA chr2R:12692677-12692797 90 1.64e-04 GGCGCGAAAA TTTAAATT TCGAAAGACT chrX:1900601-1900721 89 1.64e-04 AAGCGCACTT TTTAAATT TCCAAAAGTA chr2R:20870686-20870806 15 1.64e-04 TGTTTATAAA TTTGAAAT GAGCGCGCAC chr3R:21878654-21878774 105 1.64e-04 TTGCGCGTAA TTTGAAAT TATTTTTC chr2L:2815826-2815946 98 1.64e-04 CTATAAGAAA TTTGAAAT ATTGTTCTTA chr2L:11269680-11269800 36 1.64e-04 TCCTCAAACT TTTAAATT GAACTGGCTC chr3L:12206007-12206127 98 1.64e-04 TTATATCGTT TTTGAAAT TTGGAGTAAC chr2R:17493332-17493452 82 1.64e-04 CGCGCTTTAG TTTAAATT CAAATTTTGT chr3L:12732883-12733003 10 1.64e-04 CATTCCTAA TTTAAATT TTAAGATTTA chr2R:17786038-17786158 18 1.64e-04 GGAAAATCAA TTTAAATT TGATAGCTTA chr3R:29202562-29202682 100 1.64e-04 GCGGCATTCA TTTAAATT CAAAAACCTT chr3L:9824363-9824483 32 1.64e-04 TAAAAATAAA TTTAAATT TGGCGCTAAC chr3L:995806-995926 92 1.64e-04 AGGCGCCAAA TTTAAATT CTGTTTAACG chr2R:22332050-22332170 100 1.64e-04 TAGCTAACAA TTTGAAAT TCTCTGTCTT chrX:19520511-19520631 98 1.64e-04 TCAACTTGGA TTTGAAAT GTCAAGTTGA chr2R:9165607-9165727 14 1.64e-04 ATTGGTGAAA TTTAAATT TAGCCGCACT chr3L:1333114-1333234 92 1.64e-04 GCTGTGGCGG TTTAAATT TGAAAACAAA chr2L:4198354-4198474 5 2.35e-04 AAAT TTTAAAAT AAAAGTTGTA chr2R:12923763-12923883 15 2.35e-04 GTAATGCAAA TTTAAAAT CCGCGCCTAA chr2R:7516329-7516449 97 2.35e-04 AAAATCTATT TTTAAAAT AATATTTAAA chr3L:8180818-8180938 19 2.35e-04 TGATGTAAAT TTTAAAAT TAGGCGGGAG chrX:19618499-19618619 92 2.35e-04 CGTTATCGAG TTTAAAAT ACAGATACCC chr3R:7643676-7643796 89 2.35e-04 GTGCACTGTT TTTAAAAT TGGGCGCGGA chr3L:7094204-7094324 111 2.35e-04 TGGCGCGCCG TTTAAAAT AT chrX:14603942-14604062 46 2.35e-04 CGCCAAATAT TTTAAAAT TCAAAAGTTG chr2R:7712018-7712138 106 2.35e-04 TGGCGTTCAA TTTAAAAT GAATAAC chr2L:15764135-15764255 3 2.35e-04 TA TTTAAAAT GCTCGCGCCA chr2L:10483187-10483307 12 2.35e-04 TCTGCGAATT TTTAAAAT TTAAAACCAC chrX:2617593-2617713 73 2.35e-04 ACCAAAGGTA TTTAAAAT ACCAACCACC chr2R:16957381-16957501 2 2.35e-04 G TTTAAAAT TTGCGCTTCG chr3L:7975052-7975172 10 2.35e-04 AATAATTAT TTTAAAAT ATTTAATGTT chrX:6687413-6687533 92 2.35e-04 ATGTTGGCAG TTTAAAAT TAGTTTTGGA chrX:14603690-14603810 78 2.35e-04 CAAAACAAAG TTTAAAAT ATATTCACGC chrX:2170572-2170692 42 2.35e-04 GAGCTTAGAT TTTAAAAT ACCCGCTCTA chrX:20427000-20427120 93 2.35e-04 atcgttatcg ttTAAAAT ATTGAATTAC chr3L:16390924-16391044 3 2.35e-04 GT TTTAAAAT TGGTACTTAT chr3L:10882770-10882890 10 2.66e-04 GAGATCAAT TTCGAATT CAAATAATGT chr3R:18230381-18230501 13 2.66e-04 AAGTGAGAAA TTCGAATT CAAGCTCGCG chrX:11615782-11615902 111 2.66e-04 ATCGAAATTA TTCGAATT TT chr3L:21210071-21210191 3 2.66e-04 AA TTCGAATT GTGTGCCTGT chr2R:10557151-10557271 4 2.66e-04 GCA TTCGAATT TGAACTGAGT chrX:11459416-11459536 33 2.66e-04 taagtattat tTCGAATT TATGCAACGA chr3R:27679126-27679246 30 3.43e-04 CTATTCGCAA TTCAAATT CATTCAGACT chr2R:8170162-8170282 18 3.43e-04 GATATCACAA TTCAAATT TACCGCCTTA chr2L:2758281-2758401 75 3.43e-04 TACTTTTATA TTCAAATT CAAATATAAG chr2R:13414677-13414797 104 3.43e-04 GCGCGAATTA TTCAAATT CAAATATTC chrX:16321206-16321326 24 3.43e-04 GAACAATGTT TTCAAATT TGTTTTCCGC chrX:5941925-5942045 17 3.43e-04 GCTCTTTGGA TTCAAATT GTGGCGCCAA chr3R:25235514-25235634 103 3.43e-04 ACAATTCAAT TTCAAATT TGAAAATATT chrX:8129357-8129477 44 3.43e-04 CAAGCACCTA TTCAAATT GCGCGTTATC chr2R:21560106-21560226 103 3.43e-04 GAATACAAAT TTCAAATT AAGCATCCAA chr3L:1331664-1331784 112 3.43e-04 AAACAGAATA TTCGAAAT G chr2R:24857337-24857457 97 3.43e-04 GGGCGCCAAC TTCAAATT TAAGGCCATC chr3L:16100157-16100277 12 3.43e-04 ataatatcaa ttcaaatt acatttTAAA chr2R:23877614-23877734 21 3.43e-04 TAAAGCTTTA TTCAAATT TTGGCGCCCT chrX:11459027-11459147 7 3.43e-04 AACTTT TTCGAAAT TTGCCGCCAT chr2L:4331874-4331994 72 3.43e-04 ACAAAGCTTT TTCGAAAT TGTTGTATGG chrX:16783459-16783579 13 3.43e-04 CAGATACAAT TTCAAATT TCACGCAGGG chr2R:7709499-7709619 101 3.43e-04 GGCGCCAATA TTCGAAAT TAACCAAAAA chr3R:22381235-22381355 29 3.89e-04 AATCAAACTA TTCAAAAT AGGTGCGAGA chr2R:24017218-24017338 96 3.89e-04 GCTCGAAGAA TTCAAAAT CGTTGATAAG chrX:17924191-17924311 93 3.89e-04 CTTACTGAAA TTCAAAAT GAAACGCGCA chr2R:18705869-18705989 11 3.89e-04 AACATCTTAT TTCAAAAT TTGGCGCCTA chr3L:17035542-17035662 26 3.89e-04 GCCGCCAAAA TTCAAAAT ACAATTGTAC chrX:18410206-18410326 99 3.89e-04 ATGCGTGGAA TTCAAAAT ATTTGTTTCG chr3L:16495360-16495480 73 3.89e-04 GCTTTTGCAA TTCAAAAT GTCACCGCCA chr2L:18714233-18714353 29 4.35e-04 ATCTTAAAGA TTTGAATA GCTCAGATCA chr2L:6448479-6448599 99 4.35e-04 TGGCGCGTAA TTTGAATA TTCTTTCTAT chr2L:5525801-5525921 33 5.82e-04 TTTGTACCAT TTTGAAAA CAAACCGCTC chr2R:13205311-13205431 91 5.82e-04 AGGGGGTATC TTTGAAAA CAAGTGTGAA chr2R:14526126-14526246 2 5.82e-04 A TTTGAACT CAACAGCTGT chr3R:30177645-30177765 95 5.82e-04 TACTTTTAGT TTTGAAAA TACAGATGAA chr2R:12521324-12521444 24 5.82e-04 CAATGAGATA TTTGAAAA TGGCGCCTTT chr3R:8561654-8561774 36 5.82e-04 CAGGAGAAGC TTTGAAAA GCCGCGGGAA chr3R:8807233-8807353 86 5.82e-04 GGGCGCGAAA TTTAAATA ATGAACTGTA chr2R:19390003-19390123 23 5.82e-04 TGGTGGCATT TTTAAATA GAACCGCCAA chr3L:3457052-3457172 103 5.82e-04 GGCGCCATCT TTTGAAAA TGGTTTACTT chr3L:17055457-17055577 11 5.82e-04 TGCCATGCAT TTTGAAAA ACGAACTTTC chr3R:15786618-15786738 14 5.82e-04 CTATATAATA TTTAAATA TGCGCGCCAA chr2R:19122099-19122219 111 5.82e-04 TTATGAGCTA TTTGAAAA TT chr3L:3940392-3940512 1 5.82e-04 . TTTGAAAA ACACTTATCG chr2R:13183904-13184024 90 5.82e-04 GGCGCCAAAG TTTGAACT GCAAAACCTT chr3R:15147996-15148116 43 5.82e-04 CGCCAAGTTT TTTGAAAA AACGTAAGCA chr3R:29993374-29993494 86 6.99e-04 GGCGGGATGA TTTAAAAA CGCAAATGGT chr3L:18865541-18865661 12 6.99e-04 GTCGTCATTT TTTAAACT TTAATCGATG chr2R:8435039-8435159 30 6.99e-04 CACTGTTTAA TTTAAAAA AACCCGCAAA chr2L:16326999-16327119 15 6.99e-04 TATCGCCCAA TTTAAAAA TTGCGGGTGA chr3R:7902641-7902761 101 6.99e-04 TTGGCGCCCA TTTAAAAA TTTTTTTATT chr3L:1735751-1735871 82 6.99e-04 GGGCGGCACA TTTAAAAA GTTGATGTTC chrX:8240552-8240672 10 6.99e-04 CTTCCAGTT TTTAAAAA GTGCGGGCTT chr2R:23878324-23878444 40 6.99e-04 TGGAGCACTG TTTAAACT CCGCTTTCGT chr2L:1147719-1147839 30 6.99e-04 CTTATCACAA TTTAAACT CCGATAACCT chr2R:11442361-11442481 1 6.99e-04 . TTTAAAAA GAGCGCAATG chr2L:8040986-8041106 8 6.99e-04 TTTCATT TTTAAACT AGGCGCCAAG chr2R:8939816-8939936 111 6.99e-04 TGGCGGGAAT TTTAAAAA AA chr2R:13552422-13552542 92 6.99e-04 AAGCGCGAAA TTTAAAAA CCCAACGGAT chr3R:24054277-24054397 46 6.99e-04 TCGGTTTAAT TTTAAAAA TTCGCGCCAA chr2R:8167850-8167970 23 6.99e-04 TTTAGCTTAG TTTAAAAA GCGCGCCATG chrX:8461210-8461330 21 7.59e-04 CTAGCGCGCA TTTGAATG CGTTCCACAC chr3R:10815180-10815300 85 7.59e-04 GGCGCTTCAC TTTGAATG GCAAACGGGA chr3L:11728251-11728371 5 7.59e-04 TAAT TTTGAATG TTTCTGCGCG chr3L:19913700-19913820 85 7.59e-04 GGTTATCGTA TTTGAATG AAAACCTTCA chr2R:7961832-7961952 27 9.30e-04 CCTTGACGAT TTTAAATG CGGTGCCCGC chr3L:13040990-13041110 37 9.30e-04 TTGTGTCTTT TTCAAATA CGATTAATTG chr3R:7155145-7155265 23 9.30e-04 TTTTCGCACT TTTGAAAG TGTACAAGCC chrX:3174984-3175104 27 9.30e-04 TGAACGAAGT TTTAAATG TTTGTTATTT chr3R:27695147-27695267 15 9.30e-04 TTCCATTTAA TTTAAATG GTCCCGCCAA chrX:1865793-1865913 93 9.30e-04 GCTAGTGCTG TTCGAAAA TGTCTAAAAC chrX:1821195-1821315 29 9.30e-04 CAACGTAAGC TTTAAATG CCCATCAAGA chr2L:1504416-1504536 111 9.30e-04 TTCCGCCAAA TTCAAATA CA chr3R:10767771-10767891 39 9.30e-04 AATAAACAGT TTCGAAAA AATGCTAGTT chr3L:20541132-20541252 91 9.30e-04 TCACTTCTAG TTTGAAAG AAAAAAGCCC chr2L:5624180-5624300 21 9.30e-04 GCGGTTCGAG TTCGAAAA AGCTCTAATG chrX:8443081-8443201 93 9.30e-04 GCCATTTAAT TTCGAAAA TTATTCAATT chr2R:23877939-23878059 79 9.30e-04 acaaatattg ttcaaata ctgaggcttc chr3L:21773998-21774118 12 9.30e-04 GGCGCCAGAA TTCAAATA CAACGACTTG chr3L:1756237-1756357 11 1.05e-03 TCCACAGACT TTCAAACT GGCCGATAAG chr2R:24668308-24668428 111 1.05e-03 TTACAAACAT TTCAAAAA AT chr3R:9254961-9255081 108 1.05e-03 TGCTACATAA TTTAAAAG AGATT chr2L:4979312-4979432 107 1.05e-03 CTCAAAAATA TTCAAAAA GCTGGA chr2L:9968499-9968619 85 1.05e-03 GCGCGTTGAA TTCAAACT GGCGCGTTTG chr3R:15839470-15839590 93 1.05e-03 CTTAGCTATT TTCAAAAA AAAAGCGCAA chr2L:811492-811612 29 1.05e-03 AAATATGAAT TTCAAACT TACCGCCACA chr2L:8449524-8449644 101 1.05e-03 AATAATAAAA TTCAAAAA GTAAGCCAAT chr3R:30443849-30443969 97 1.12e-03 GAAAAGCTCT TTCAAATG GAAATCCGAC chr2L:9920072-9920192 7 1.12e-03 ATTCTG TTCAAATG GTAATTTAAA chrX:5323776-5323896 41 1.12e-03 GCAACCAGTC TTCAAATG CCCACAGTAT chrX:2344642-2344762 94 1.18e-03 GAGCGGACTA TTTGAACA GTACTGTTAA chr2L:106707-106827 99 1.18e-03 CTTTCATATA TTCAAAAG AAAATTGTGC chr2L:13382444-13382564 3 1.26e-03 CT TTTAAACA AACTTACGAT chr3L:20788109-20788229 95 1.26e-03 CTTCAGTGGT TTTAAACA ATCTTATTTT chrX:13211913-13212033 22 1.26e-03 TTACTTGGTA TTTAAACA AATCTATCGG chr2L:19484665-19484785 110 1.26e-03 GCGCTGAATA TTTGAAGT TTG chr3R:20581518-20581638 103 1.30e-03 AGCGCGAGAT TTTAAAGT AGAATTCTGG chr3R:10052830-10052950 31 1.34e-03 CATTTTATGT TTTGAACG GCCATAGTTA chr2R:23843259-23843379 108 1.42e-03 AGTTATCGAA TTCAAACA AAGAA chrX:9273305-9273425 46 1.42e-03 GCCCAGTATT TTCGAAGT TTCGTAAAAT chr3R:25023167-25023287 86 1.42e-03 TTATGGTATT TTTAAACG GTTCATCAGC chrX:13194409-13194529 91 1.42e-03 TGGCGCCAAg ttcaaaca cttgggtttt chr2L:560351-560471 98 1.45e-03 GGGCGCTAAA TTCAAAGT ATCATATGCT chr3L:8623866-8623986 110 1.45e-03 GGCGGtaaaa ttcaaagt ttt chr2L:17433317-17433437 57 1.46e-03 GTGAACTCGG TTCGAACG CACATTTGGC chr3L:8964642-8964762 88 1.48e-03 GGGCGCCAAT TTCAAACG AGAAACGGTA chr3L:12399345-12399465 68 1.61e-03 TGCGAAAACA TTTCAATT GTAAAATTCC chr3R:5821389-5821509 68 1.61e-03 GCTATAGTAC TTTAAAGA CCAAAAAATC chr2L:11948587-11948707 5 1.65e-03 ATAA TTTCAAAT CAATAAACTC chr3L:4277879-4277999 1 1.65e-03 . TTTCAAAT CTCGCGCTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:23053466-23053586 4.6e-05 100_[+3]_12 chrX:476872-476992 4.6e-05 32_[+3]_80 chrX:4647744-4647864 4.6e-05 38_[+3]_74 chr3L:13866927-13867047 4.6e-05 111_[+3]_1 chr2L:8220691-8220811 4.6e-05 93_[+3]_19 chr3R:9748026-9748146 4.6e-05 59_[+3]_53 chr2L:16261726-16261846 4.6e-05 93_[+3]_19 chrX:15769574-15769694 4.6e-05 19_[+3]_93 chr2R:22870948-22871068 4.6e-05 7_[+3]_105 chr3L:20113197-20113317 4.6e-05 99_[+3]_13 chr3L:3947413-3947533 4.6e-05 16_[+3]_96 chrX:8265397-8265517 4.6e-05 103_[+3]_9 chr3R:11429953-11430073 4.6e-05 31_[+3]_81 chr3R:7973190-7973310 4.6e-05 17_[+3]_95 chr2R:10729277-10729397 4.6e-05 72_[+3]_40 chr2R:16240708-16240828 4.6e-05 111_[+3]_1 chrX:5695201-5695321 4.6e-05 88_[+3]_24 chrX:646559-646679 4.6e-05 73_[+3]_39 chr3L:8534545-8534665 4.6e-05 27_[+3]_85 chr2L:3785555-3785675 4.6e-05 11_[+3]_101 chr3L:16782908-16783028 4.6e-05 40_[+3]_72 chr3R:9754653-9754773 4.6e-05 83_[+3]_29 chr2R:6041875-6041995 4.6e-05 29_[+3]_83 chr2R:7793543-7793663 4.6e-05 95_[+3]_17 chr3R:24922395-24922515 4.6e-05 1_[+3]_111 chr3L:4510452-4510572 4.6e-05 6_[+3]_106 chrX:15572098-15572218 0.00016 93_[+3]_19 chr2L:1502899-1503019 0.00016 106_[+3]_6 chr2R:13415045-13415165 0.00016 15_[+3]_97 chr3R:8343478-8343598 0.00016 82_[+3]_30 chr3R:8344324-8344444 0.00016 9_[+3]_103 chr2R:11853147-11853267 0.00016 98_[+3]_14 chr3R:27929674-27929794 0.00016 3_[+3]_109 chrX:4627284-4627404 0.00016 22_[+3]_90 chr2L:4830686-4830806 0.00016 102_[+3]_10 chrX:15841435-15841555 0.00016 69_[+3]_43 chr2R:8683012-8683132 0.00016 75_[+3]_37 chrX:15732035-15732155 0.00016 37_[+3]_75 chr2R:22080036-22080156 0.00016 17_[+3]_95 chr2R:12692677-12692797 0.00016 89_[+3]_23 chrX:1900601-1900721 0.00016 88_[+3]_24 chr2R:20870686-20870806 0.00016 14_[+3]_98 chr3R:21878654-21878774 0.00016 104_[+3]_8 chr2L:2815826-2815946 0.00016 97_[+3]_15 chr2L:11269680-11269800 0.00016 35_[+3]_77 chr3L:12206007-12206127 0.00016 97_[+3]_15 chr2R:17493332-17493452 0.00016 81_[+3]_31 chr3L:12732883-12733003 0.00016 9_[+3]_103 chr2R:17786038-17786158 0.00016 17_[+3]_95 chr3R:29202562-29202682 0.00016 99_[+3]_13 chr3L:9824363-9824483 0.00016 31_[+3]_81 chr3L:995806-995926 0.00016 91_[+3]_21 chr2R:22332050-22332170 0.00016 99_[+3]_13 chrX:19520511-19520631 0.00016 97_[+3]_15 chr2R:9165607-9165727 0.00016 13_[+3]_99 chr3L:1333114-1333234 0.00016 91_[+3]_21 chr2L:4198354-4198474 0.00024 4_[+3]_108 chr2R:12923763-12923883 0.00024 14_[+3]_98 chr2R:7516329-7516449 0.00024 96_[+3]_16 chr3L:8180818-8180938 0.00024 18_[+3]_94 chrX:19618499-19618619 0.00024 91_[+3]_21 chr3R:7643676-7643796 0.00024 88_[+3]_24 chr3L:7094204-7094324 0.00024 110_[+3]_2 chrX:14603942-14604062 0.00024 45_[+3]_67 chr2R:7712018-7712138 0.00024 105_[+3]_7 chr2L:15764135-15764255 0.00024 2_[+3]_110 chr2L:10483187-10483307 0.00024 11_[+3]_101 chrX:2617593-2617713 0.00024 72_[+3]_40 chr2R:16957381-16957501 0.00024 1_[+3]_111 chr3L:7975052-7975172 0.00024 9_[+3]_103 chrX:6687413-6687533 0.00024 91_[+3]_21 chrX:14603690-14603810 0.00024 77_[+3]_35 chrX:2170572-2170692 0.00024 41_[+3]_71 chrX:20427000-20427120 0.00024 92_[+3]_20 chr3L:16390924-16391044 0.00024 2_[+3]_110 chr3L:10882770-10882890 0.00027 9_[+3]_103 chr3R:18230381-18230501 0.00027 12_[+3]_100 chrX:11615782-11615902 0.00027 110_[+3]_2 chr3L:21210071-21210191 0.00027 2_[+3]_110 chr2R:10557151-10557271 0.00027 3_[+3]_109 chrX:11459416-11459536 0.00027 32_[+3]_80 chr3R:27679126-27679246 0.00034 29_[+3]_83 chr2R:8170162-8170282 0.00034 17_[+3]_95 chr2L:2758281-2758401 0.00034 74_[+3]_38 chr2R:13414677-13414797 0.00034 103_[+3]_9 chrX:16321206-16321326 0.00034 23_[+3]_89 chrX:5941925-5942045 0.00034 16_[+3]_96 chr3R:25235514-25235634 0.00034 102_[+3]_10 chrX:8129357-8129477 0.00034 43_[+3]_69 chr2R:21560106-21560226 0.00034 102_[+3]_10 chr3L:1331664-1331784 0.00034 111_[+3]_1 chr2R:24857337-24857457 0.00034 96_[+3]_16 chr3L:16100157-16100277 0.00034 11_[+3]_101 chr2R:23877614-23877734 0.00034 20_[+3]_92 chrX:11459027-11459147 0.00034 6_[+3]_106 chr2L:4331874-4331994 0.00034 71_[+3]_41 chrX:16783459-16783579 0.00034 12_[+3]_100 chr2R:7709499-7709619 0.00034 100_[+3]_12 chr3R:22381235-22381355 0.00039 28_[+3]_84 chr2R:24017218-24017338 0.00039 95_[+3]_17 chrX:17924191-17924311 0.00039 92_[+3]_20 chr2R:18705869-18705989 0.00039 10_[+3]_102 chr3L:17035542-17035662 0.00039 25_[+3]_87 chrX:18410206-18410326 0.00039 98_[+3]_14 chr3L:16495360-16495480 0.00039 72_[+3]_40 chr2L:18714233-18714353 0.00044 28_[+3]_84 chr2L:6448479-6448599 0.00044 98_[+3]_14 chr2L:5525801-5525921 0.00058 32_[+3]_80 chr2R:13205311-13205431 0.00058 90_[+3]_22 chr2R:14526126-14526246 0.00058 1_[+3]_111 chr3R:30177645-30177765 0.00058 94_[+3]_18 chr2R:12521324-12521444 0.00058 23_[+3]_89 chr3R:8561654-8561774 0.00058 35_[+3]_77 chr3R:8807233-8807353 0.00058 85_[+3]_27 chr2R:19390003-19390123 0.00058 22_[+3]_90 chr3L:3457052-3457172 0.00058 102_[+3]_10 chr3L:17055457-17055577 0.00058 10_[+3]_102 chr3R:15786618-15786738 0.00058 13_[+3]_99 chr2R:19122099-19122219 0.00058 110_[+3]_2 chr3L:3940392-3940512 0.00058 [+3]_112 chr2R:13183904-13184024 0.00058 89_[+3]_23 chr3R:15147996-15148116 0.00058 42_[+3]_70 chr3R:29993374-29993494 0.0007 85_[+3]_27 chr3L:18865541-18865661 0.0007 11_[+3]_101 chr2R:8435039-8435159 0.0007 29_[+3]_83 chr2L:16326999-16327119 0.0007 14_[+3]_98 chr3R:7902641-7902761 0.0007 100_[+3]_12 chr3L:1735751-1735871 0.0007 81_[+3]_31 chrX:8240552-8240672 0.0007 9_[+3]_103 chr2R:23878324-23878444 0.0007 39_[+3]_73 chr2L:1147719-1147839 0.0007 29_[+3]_83 chr2R:11442361-11442481 0.0007 [+3]_112 chr2L:8040986-8041106 0.0007 7_[+3]_105 chr2R:8939816-8939936 0.0007 110_[+3]_2 chr2R:13552422-13552542 0.0007 91_[+3]_21 chr3R:24054277-24054397 0.0007 45_[+3]_67 chr2R:8167850-8167970 0.0007 22_[+3]_90 chrX:8461210-8461330 0.00076 20_[+3]_92 chr3R:10815180-10815300 0.00076 84_[+3]_28 chr3L:11728251-11728371 0.00076 4_[+3]_108 chr3L:19913700-19913820 0.00076 84_[+3]_28 chr2R:7961832-7961952 0.00093 26_[+3]_86 chr3L:13040990-13041110 0.00093 36_[+3]_76 chr3R:7155145-7155265 0.00093 22_[+3]_90 chrX:3174984-3175104 0.00093 26_[+3]_86 chr3R:27695147-27695267 0.00093 14_[+3]_98 chrX:1865793-1865913 0.00093 92_[+3]_20 chrX:1821195-1821315 0.00093 28_[+3]_84 chr2L:1504416-1504536 0.00093 110_[+3]_2 chr3R:10767771-10767891 0.00093 38_[+3]_74 chr3L:20541132-20541252 0.00093 90_[+3]_22 chr2L:5624180-5624300 0.00093 20_[+3]_92 chrX:8443081-8443201 0.00093 92_[+3]_20 chr2R:23877939-23878059 0.00093 78_[+3]_34 chr3L:21773998-21774118 0.00093 11_[+3]_101 chr3L:1756237-1756357 0.0011 10_[+3]_102 chr2R:24668308-24668428 0.0011 110_[+3]_2 chr3R:9254961-9255081 0.0011 107_[+3]_5 chr2L:4979312-4979432 0.0011 106_[+3]_6 chr2L:9968499-9968619 0.0011 84_[+3]_28 chr3R:15839470-15839590 0.0011 92_[+3]_20 chr2L:811492-811612 0.0011 28_[+3]_84 chr2L:8449524-8449644 0.0011 100_[+3]_12 chr3R:30443849-30443969 0.0011 96_[+3]_16 chr2L:9920072-9920192 0.0011 6_[+3]_106 chrX:5323776-5323896 0.0011 40_[+3]_72 chrX:2344642-2344762 0.0012 93_[+3]_19 chr2L:106707-106827 0.0012 98_[+3]_14 chr2L:13382444-13382564 0.0013 2_[+3]_110 chr3L:20788109-20788229 0.0013 94_[+3]_18 chrX:13211913-13212033 0.0013 21_[+3]_91 chr2L:19484665-19484785 0.0013 109_[+3]_3 chr3R:20581518-20581638 0.0013 102_[+3]_10 chr3R:10052830-10052950 0.0013 30_[+3]_82 chr2R:23843259-23843379 0.0014 107_[+3]_5 chrX:9273305-9273425 0.0014 45_[+3]_67 chr3R:25023167-25023287 0.0014 85_[+3]_27 chrX:13194409-13194529 0.0014 90_[+3]_22 chr2L:560351-560471 0.0015 97_[+3]_15 chr3L:8623866-8623986 0.0015 109_[+3]_3 chr2L:17433317-17433437 0.0015 56_[+3]_56 chr3L:8964642-8964762 0.0015 87_[+3]_25 chr3L:12399345-12399465 0.0016 67_[+3]_45 chr3R:5821389-5821509 0.0016 67_[+3]_45 chr2L:11948587-11948707 0.0017 4_[+3]_108 chr3L:4277879-4277999 0.0017 [+3]_112 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTRAAWT width=8 seqs=186 chr3R:23053466-23053586 ( 101) TTTGAATT 1 chrX:476872-476992 ( 33) TTTGAATT 1 chrX:4647744-4647864 ( 39) TTTGAATT 1 chr3L:13866927-13867047 ( 112) TTTGAATT 1 chr2L:8220691-8220811 ( 94) TTTGAATT 1 chr3R:9748026-9748146 ( 60) TTTGAATT 1 chr2L:16261726-16261846 ( 94) TTTGAATT 1 chrX:15769574-15769694 ( 20) TTTGAATT 1 chr2R:22870948-22871068 ( 8) TTTGAATT 1 chr3L:20113197-20113317 ( 100) TTTGAATT 1 chr3L:3947413-3947533 ( 17) TTTGAATT 1 chrX:8265397-8265517 ( 104) TTTGAATT 1 chr3R:11429953-11430073 ( 32) TTTGAATT 1 chr3R:7973190-7973310 ( 18) TTTGAATT 1 chr2R:10729277-10729397 ( 73) TTTGAATT 1 chr2R:16240708-16240828 ( 112) TTTGAATT 1 chrX:5695201-5695321 ( 89) TTTGAATT 1 chrX:646559-646679 ( 74) TTTGAATT 1 chr3L:8534545-8534665 ( 28) TTTGAATT 1 chr2L:3785555-3785675 ( 12) TTTGAATT 1 chr3L:16782908-16783028 ( 41) TTTGAATT 1 chr3R:9754653-9754773 ( 84) TTTGAATT 1 chr2R:6041875-6041995 ( 30) TTTGAATT 1 chr2R:7793543-7793663 ( 96) TTTGAATT 1 chr3R:24922395-24922515 ( 2) TTTGAATT 1 chr3L:4510452-4510572 ( 7) TTTGAATT 1 chrX:15572098-15572218 ( 94) TTTGAAAT 1 chr2L:1502899-1503019 ( 107) TTTAAATT 1 chr2R:13415045-13415165 ( 16) TTTGAAAT 1 chr3R:8343478-8343598 ( 83) TTTGAAAT 1 chr3R:8344324-8344444 ( 10) TTTAAATT 1 chr2R:11853147-11853267 ( 99) TTTGAAAT 1 chr3R:27929674-27929794 ( 4) TTTAAATT 1 chrX:4627284-4627404 ( 23) TTTAAATT 1 chr2L:4830686-4830806 ( 103) TTTGAAAT 1 chrX:15841435-15841555 ( 70) TTTAAATT 1 chr2R:8683012-8683132 ( 76) TTTGAAAT 1 chrX:15732035-15732155 ( 38) TTTGAAAT 1 chr2R:22080036-22080156 ( 18) TTTAAATT 1 chr2R:12692677-12692797 ( 90) TTTAAATT 1 chrX:1900601-1900721 ( 89) TTTAAATT 1 chr2R:20870686-20870806 ( 15) TTTGAAAT 1 chr3R:21878654-21878774 ( 105) TTTGAAAT 1 chr2L:2815826-2815946 ( 98) TTTGAAAT 1 chr2L:11269680-11269800 ( 36) TTTAAATT 1 chr3L:12206007-12206127 ( 98) TTTGAAAT 1 chr2R:17493332-17493452 ( 82) TTTAAATT 1 chr3L:12732883-12733003 ( 10) TTTAAATT 1 chr2R:17786038-17786158 ( 18) TTTAAATT 1 chr3R:29202562-29202682 ( 100) TTTAAATT 1 chr3L:9824363-9824483 ( 32) TTTAAATT 1 chr3L:995806-995926 ( 92) TTTAAATT 1 chr2R:22332050-22332170 ( 100) TTTGAAAT 1 chrX:19520511-19520631 ( 98) TTTGAAAT 1 chr2R:9165607-9165727 ( 14) TTTAAATT 1 chr3L:1333114-1333234 ( 92) TTTAAATT 1 chr2L:4198354-4198474 ( 5) TTTAAAAT 1 chr2R:12923763-12923883 ( 15) TTTAAAAT 1 chr2R:7516329-7516449 ( 97) TTTAAAAT 1 chr3L:8180818-8180938 ( 19) TTTAAAAT 1 chrX:19618499-19618619 ( 92) TTTAAAAT 1 chr3R:7643676-7643796 ( 89) TTTAAAAT 1 chr3L:7094204-7094324 ( 111) TTTAAAAT 1 chrX:14603942-14604062 ( 46) TTTAAAAT 1 chr2R:7712018-7712138 ( 106) TTTAAAAT 1 chr2L:15764135-15764255 ( 3) TTTAAAAT 1 chr2L:10483187-10483307 ( 12) TTTAAAAT 1 chrX:2617593-2617713 ( 73) TTTAAAAT 1 chr2R:16957381-16957501 ( 2) TTTAAAAT 1 chr3L:7975052-7975172 ( 10) TTTAAAAT 1 chrX:6687413-6687533 ( 92) TTTAAAAT 1 chrX:14603690-14603810 ( 78) TTTAAAAT 1 chrX:2170572-2170692 ( 42) TTTAAAAT 1 chrX:20427000-20427120 ( 93) TTTAAAAT 1 chr3L:16390924-16391044 ( 3) TTTAAAAT 1 chr3L:10882770-10882890 ( 10) TTCGAATT 1 chr3R:18230381-18230501 ( 13) TTCGAATT 1 chrX:11615782-11615902 ( 111) TTCGAATT 1 chr3L:21210071-21210191 ( 3) TTCGAATT 1 chr2R:10557151-10557271 ( 4) TTCGAATT 1 chrX:11459416-11459536 ( 33) TTCGAATT 1 chr3R:27679126-27679246 ( 30) TTCAAATT 1 chr2R:8170162-8170282 ( 18) TTCAAATT 1 chr2L:2758281-2758401 ( 75) TTCAAATT 1 chr2R:13414677-13414797 ( 104) TTCAAATT 1 chrX:16321206-16321326 ( 24) TTCAAATT 1 chrX:5941925-5942045 ( 17) TTCAAATT 1 chr3R:25235514-25235634 ( 103) TTCAAATT 1 chrX:8129357-8129477 ( 44) TTCAAATT 1 chr2R:21560106-21560226 ( 103) TTCAAATT 1 chr3L:1331664-1331784 ( 112) TTCGAAAT 1 chr2R:24857337-24857457 ( 97) TTCAAATT 1 chr3L:16100157-16100277 ( 12) TTCAAATT 1 chr2R:23877614-23877734 ( 21) TTCAAATT 1 chrX:11459027-11459147 ( 7) TTCGAAAT 1 chr2L:4331874-4331994 ( 72) TTCGAAAT 1 chrX:16783459-16783579 ( 13) TTCAAATT 1 chr2R:7709499-7709619 ( 101) TTCGAAAT 1 chr3R:22381235-22381355 ( 29) TTCAAAAT 1 chr2R:24017218-24017338 ( 96) TTCAAAAT 1 chrX:17924191-17924311 ( 93) TTCAAAAT 1 chr2R:18705869-18705989 ( 11) TTCAAAAT 1 chr3L:17035542-17035662 ( 26) TTCAAAAT 1 chrX:18410206-18410326 ( 99) TTCAAAAT 1 chr3L:16495360-16495480 ( 73) TTCAAAAT 1 chr2L:18714233-18714353 ( 29) TTTGAATA 1 chr2L:6448479-6448599 ( 99) TTTGAATA 1 chr2L:5525801-5525921 ( 33) TTTGAAAA 1 chr2R:13205311-13205431 ( 91) TTTGAAAA 1 chr2R:14526126-14526246 ( 2) TTTGAACT 1 chr3R:30177645-30177765 ( 95) TTTGAAAA 1 chr2R:12521324-12521444 ( 24) TTTGAAAA 1 chr3R:8561654-8561774 ( 36) TTTGAAAA 1 chr3R:8807233-8807353 ( 86) TTTAAATA 1 chr2R:19390003-19390123 ( 23) TTTAAATA 1 chr3L:3457052-3457172 ( 103) TTTGAAAA 1 chr3L:17055457-17055577 ( 11) TTTGAAAA 1 chr3R:15786618-15786738 ( 14) TTTAAATA 1 chr2R:19122099-19122219 ( 111) TTTGAAAA 1 chr3L:3940392-3940512 ( 1) TTTGAAAA 1 chr2R:13183904-13184024 ( 90) TTTGAACT 1 chr3R:15147996-15148116 ( 43) TTTGAAAA 1 chr3R:29993374-29993494 ( 86) TTTAAAAA 1 chr3L:18865541-18865661 ( 12) TTTAAACT 1 chr2R:8435039-8435159 ( 30) TTTAAAAA 1 chr2L:16326999-16327119 ( 15) TTTAAAAA 1 chr3R:7902641-7902761 ( 101) TTTAAAAA 1 chr3L:1735751-1735871 ( 82) TTTAAAAA 1 chrX:8240552-8240672 ( 10) TTTAAAAA 1 chr2R:23878324-23878444 ( 40) TTTAAACT 1 chr2L:1147719-1147839 ( 30) TTTAAACT 1 chr2R:11442361-11442481 ( 1) TTTAAAAA 1 chr2L:8040986-8041106 ( 8) TTTAAACT 1 chr2R:8939816-8939936 ( 111) TTTAAAAA 1 chr2R:13552422-13552542 ( 92) TTTAAAAA 1 chr3R:24054277-24054397 ( 46) TTTAAAAA 1 chr2R:8167850-8167970 ( 23) TTTAAAAA 1 chrX:8461210-8461330 ( 21) TTTGAATG 1 chr3R:10815180-10815300 ( 85) TTTGAATG 1 chr3L:11728251-11728371 ( 5) TTTGAATG 1 chr3L:19913700-19913820 ( 85) TTTGAATG 1 chr2R:7961832-7961952 ( 27) TTTAAATG 1 chr3L:13040990-13041110 ( 37) TTCAAATA 1 chr3R:7155145-7155265 ( 23) TTTGAAAG 1 chrX:3174984-3175104 ( 27) TTTAAATG 1 chr3R:27695147-27695267 ( 15) TTTAAATG 1 chrX:1865793-1865913 ( 93) TTCGAAAA 1 chrX:1821195-1821315 ( 29) TTTAAATG 1 chr2L:1504416-1504536 ( 111) TTCAAATA 1 chr3R:10767771-10767891 ( 39) TTCGAAAA 1 chr3L:20541132-20541252 ( 91) TTTGAAAG 1 chr2L:5624180-5624300 ( 21) TTCGAAAA 1 chrX:8443081-8443201 ( 93) TTCGAAAA 1 chr2R:23877939-23878059 ( 79) TTCAAATA 1 chr3L:21773998-21774118 ( 12) TTCAAATA 1 chr3L:1756237-1756357 ( 11) TTCAAACT 1 chr2R:24668308-24668428 ( 111) TTCAAAAA 1 chr3R:9254961-9255081 ( 108) TTTAAAAG 1 chr2L:4979312-4979432 ( 107) TTCAAAAA 1 chr2L:9968499-9968619 ( 85) TTCAAACT 1 chr3R:15839470-15839590 ( 93) TTCAAAAA 1 chr2L:811492-811612 ( 29) TTCAAACT 1 chr2L:8449524-8449644 ( 101) TTCAAAAA 1 chr3R:30443849-30443969 ( 97) TTCAAATG 1 chr2L:9920072-9920192 ( 7) TTCAAATG 1 chrX:5323776-5323896 ( 41) TTCAAATG 1 chrX:2344642-2344762 ( 94) TTTGAACA 1 chr2L:106707-106827 ( 99) TTCAAAAG 1 chr2L:13382444-13382564 ( 3) TTTAAACA 1 chr3L:20788109-20788229 ( 95) TTTAAACA 1 chrX:13211913-13212033 ( 22) TTTAAACA 1 chr2L:19484665-19484785 ( 110) TTTGAAGT 1 chr3R:20581518-20581638 ( 103) TTTAAAGT 1 chr3R:10052830-10052950 ( 31) TTTGAACG 1 chr2R:23843259-23843379 ( 108) TTCAAACA 1 chrX:9273305-9273425 ( 46) TTCGAAGT 1 chr3R:25023167-25023287 ( 86) TTTAAACG 1 chrX:13194409-13194529 ( 91) TTCAAACA 1 chr2L:560351-560471 ( 98) TTCAAAGT 1 chr3L:8623866-8623986 ( 110) TTCAAAGT 1 chr2L:17433317-17433437 ( 57) TTCGAACG 1 chr3L:8964642-8964762 ( 88) TTCAAACG 1 chr3L:12399345-12399465 ( 68) TTTCAATT 1 chr3R:5821389-5821509 ( 68) TTTAAAGA 1 chr2L:11948587-11948707 ( 5) TTTCAAAT 1 chr3L:4277879-4277999 ( 1) TTTCAAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.65366 E= 2.0e-071 -1418 -1418 -1418 171 -1418 -1418 -1418 171 -1418 59 -1418 119 91 -363 111 -1418 173 -1418 -1418 -1418 173 -1418 -1418 -1418 48 -97 -259 55 -32 -1418 -92 110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 186 E= 2.0e-071 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.301075 0.000000 0.698925 0.564516 0.016129 0.419355 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.419355 0.102151 0.032258 0.446237 0.241935 0.000000 0.102151 0.655914 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTRAAWT MEME-3 regular expression -------------------------------------------------------------------------------- TT[TC][AG]AA[TA][TA] -------------------------------------------------------------------------------- Time 19.03 secs. ******************************************************************************** ******************************************************************************** MOTIF AWCAGCTG MEME-4 width = 8 sites = 41 llr = 391 E-value = 2.6e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 86:a:::: pos.-specific C 1:a::a:: probability G ::::a::a matrix T :3::::a: bits 2.4 * ** 2.1 * ** * 1.9 * ** * 1.7 **** * Relative 1.4 ****** Entropy 1.2 ****** (13.8 bits) 0.9 * ****** 0.7 * ****** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AACAGCTG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:24668308-24668428 30 1.25e-05 TAACGAACAA AACAGCTG ATCGGCAAAA chr3R:8217870-8217990 76 1.25e-05 GATACGGGCG AACAGCTG ACTCGTTCCA chrX:19618499-19618619 15 1.25e-05 TGACGAGCGG AACAGCTG ATTAGTCTGT chrX:10385077-10385197 95 1.25e-05 TCGAGGCAGA AACAGCTG TTTGCCTGGA chr3L:9364285-9364405 60 1.25e-05 ATCGGAAAGA AACAGCTG ATGCTGCCCA chr2R:14526126-14526246 11 1.25e-05 ATTTGAACTC AACAGCTG TTGTCGCGGC chr3L:20028994-20029114 59 1.25e-05 GACAGTTTAA AACAGCTG TATACATACT chr2R:18710820-18710940 98 1.25e-05 TCCCTCATTT AACAGCTG ACTACCAATA chr3R:10815180-10815300 60 1.25e-05 GAAATTTTAA AACAGCTG TCCCGCTGGC chr3R:21878654-21878774 26 1.25e-05 TTATCGAATC AACAGCTG TTCTGCAATC chr2L:9920072-9920192 105 1.25e-05 GCACTAACTT AACAGCTG TGTAGATA chr2L:5526872-5526992 72 1.25e-05 ATTACTTGCG AACAGCTG ATTTAGCTAG chr3R:15786618-15786738 67 1.25e-05 GTTGGCGTGT AACAGCTG TTAAGTCTGC chr3R:9754653-9754773 2 1.25e-05 C AACAGCTG TTCCGACAGT chr3R:22380028-22380148 74 1.25e-05 GCTTGCCTGA AACAGCTG ATCCTATAAT chr2L:8449524-8449644 30 1.25e-05 CAACAATCGA AACAGCTG TTCGTCTGTG chr3L:8964642-8964762 45 1.25e-05 ATGGTATAAA AACAGCTG AGGAGATAAT chrX:15572098-15572218 19 2.52e-05 ATTTATTTCA ATCAGCTG TTTACCAGTG chr2R:13205311-13205431 25 2.52e-05 GCGAAATGAA ATCAGCTG GCTGTTGTGT chr3R:30177645-30177765 36 2.52e-05 CTTCGAGTCG ATCAGCTG TTCGGCAGTG chr2R:6459847-6459967 77 2.52e-05 ccgctgcgct atcagctg tttatccgct chr2L:4979312-4979432 43 2.52e-05 ATGCGGCCAA ATCAGCTG TTTTCTGCTT chr2R:11841506-11841626 79 2.52e-05 TCTGACTATC ATCAGCTG TTTTTGTTAT chr2R:16957381-16957501 93 2.52e-05 CACACTCAGA ATCAGCTG ACTTGGGTGG chrX:20427000-20427120 41 2.52e-05 GCGCTTCACC ATCAGCTG TTGCCGAgtt chr2L:19484665-19484785 26 2.52e-05 GTTCCCTCCA ATCAGCTG ATTGGTCGAT chr2R:22332050-22332170 11 2.52e-05 TATAAATGAA ATCAGCTG GACTGGTCTT chr2L:1502899-1503019 30 3.35e-05 GATCTTGGCG CACAGCTG TTTGGCTTAC chr2R:12692677-12692797 11 3.35e-05 GTAAACAAAT CACAGCTG ATGTGCGGAG chr2L:811492-811612 94 3.35e-05 GATGCGTGTG CACAGCTG ACTTGCCGGC chr3R:8344324-8344444 83 5.00e-05 CGACTCACAA AGCAGCTG GTCACACTGC chrX:2344642-2344762 72 5.00e-05 TAACAGAGCA AGCAGCTG TTAAGAGCGG chr2R:22870948-22871068 96 5.00e-05 GTGACCATCG CTCAGCTG ATTTGGCGCA chr3L:11062607-11062727 35 5.00e-05 TGAGCGCAGA CTCAGCTG ATGTTGGCGC chrX:14603690-14603810 40 5.81e-05 ATGCCACCTA GACAGCTG CCCGCCAACC chr3R:18572968-18573088 102 6.61e-05 ACAAACGGGG AACAGCGG AAGGGAACAC chrX:5695201-5695321 26 7.44e-05 GGTGCGGATA ACCAGCTG TTTTGCTATC chr2L:292333-292453 90 8.26e-05 CCACTCTCTT GTCAGCTG TGTGGTGCTG chrX:476872-476992 11 1.04e-04 GACTATTCCA AACAGCTC ATAACCAGAA chr2R:22080036-22080156 58 1.04e-04 GATCTCTGTC AACAGCTC GATAATTATC chr3R:25023167-25023287 98 1.04e-04 TAAACGGTTC ATCAGCGG GCACACTTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:24668308-24668428 1.3e-05 29_[+4]_83 chr3R:8217870-8217990 1.3e-05 75_[+4]_37 chrX:19618499-19618619 1.3e-05 14_[+4]_98 chrX:10385077-10385197 1.3e-05 94_[+4]_18 chr3L:9364285-9364405 1.3e-05 59_[+4]_53 chr2R:14526126-14526246 1.3e-05 10_[+4]_102 chr3L:20028994-20029114 1.3e-05 58_[+4]_54 chr2R:18710820-18710940 1.3e-05 97_[+4]_15 chr3R:10815180-10815300 1.3e-05 59_[+4]_53 chr3R:21878654-21878774 1.3e-05 25_[+4]_87 chr2L:9920072-9920192 1.3e-05 104_[+4]_8 chr2L:5526872-5526992 1.3e-05 71_[+4]_41 chr3R:15786618-15786738 1.3e-05 66_[+4]_46 chr3R:9754653-9754773 1.3e-05 1_[+4]_111 chr3R:22380028-22380148 1.3e-05 73_[+4]_39 chr2L:8449524-8449644 1.3e-05 29_[+4]_83 chr3L:8964642-8964762 1.3e-05 44_[+4]_68 chrX:15572098-15572218 2.5e-05 18_[+4]_94 chr2R:13205311-13205431 2.5e-05 24_[+4]_88 chr3R:30177645-30177765 2.5e-05 35_[+4]_77 chr2R:6459847-6459967 2.5e-05 76_[+4]_36 chr2L:4979312-4979432 2.5e-05 42_[+4]_70 chr2R:11841506-11841626 2.5e-05 78_[+4]_34 chr2R:16957381-16957501 2.5e-05 92_[+4]_20 chrX:20427000-20427120 2.5e-05 40_[+4]_72 chr2L:19484665-19484785 2.5e-05 25_[+4]_87 chr2R:22332050-22332170 2.5e-05 10_[+4]_102 chr2L:1502899-1503019 3.4e-05 29_[+4]_83 chr2R:12692677-12692797 3.4e-05 10_[+4]_102 chr2L:811492-811612 3.4e-05 93_[+4]_19 chr3R:8344324-8344444 5e-05 82_[+4]_30 chrX:2344642-2344762 5e-05 71_[+4]_41 chr2R:22870948-22871068 5e-05 95_[+4]_17 chr3L:11062607-11062727 5e-05 34_[+4]_78 chrX:14603690-14603810 5.8e-05 39_[+4]_73 chr3R:18572968-18573088 6.6e-05 101_[+4]_11 chrX:5695201-5695321 7.4e-05 25_[+4]_87 chr2L:292333-292453 8.3e-05 89_[+4]_23 chrX:476872-476992 0.0001 10_[+4]_102 chr2R:22080036-22080156 0.0001 57_[+4]_55 chr3R:25023167-25023287 0.0001 97_[+4]_15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AWCAGCTG width=8 seqs=41 chr2R:24668308-24668428 ( 30) AACAGCTG 1 chr3R:8217870-8217990 ( 76) AACAGCTG 1 chrX:19618499-19618619 ( 15) AACAGCTG 1 chrX:10385077-10385197 ( 95) AACAGCTG 1 chr3L:9364285-9364405 ( 60) AACAGCTG 1 chr2R:14526126-14526246 ( 11) AACAGCTG 1 chr3L:20028994-20029114 ( 59) AACAGCTG 1 chr2R:18710820-18710940 ( 98) AACAGCTG 1 chr3R:10815180-10815300 ( 60) AACAGCTG 1 chr3R:21878654-21878774 ( 26) AACAGCTG 1 chr2L:9920072-9920192 ( 105) AACAGCTG 1 chr2L:5526872-5526992 ( 72) AACAGCTG 1 chr3R:15786618-15786738 ( 67) AACAGCTG 1 chr3R:9754653-9754773 ( 2) AACAGCTG 1 chr3R:22380028-22380148 ( 74) AACAGCTG 1 chr2L:8449524-8449644 ( 30) AACAGCTG 1 chr3L:8964642-8964762 ( 45) AACAGCTG 1 chrX:15572098-15572218 ( 19) ATCAGCTG 1 chr2R:13205311-13205431 ( 25) ATCAGCTG 1 chr3R:30177645-30177765 ( 36) ATCAGCTG 1 chr2R:6459847-6459967 ( 77) ATCAGCTG 1 chr2L:4979312-4979432 ( 43) ATCAGCTG 1 chr2R:11841506-11841626 ( 79) ATCAGCTG 1 chr2R:16957381-16957501 ( 93) ATCAGCTG 1 chrX:20427000-20427120 ( 41) ATCAGCTG 1 chr2L:19484665-19484785 ( 26) ATCAGCTG 1 chr2R:22332050-22332170 ( 11) ATCAGCTG 1 chr2L:1502899-1503019 ( 30) CACAGCTG 1 chr2R:12692677-12692797 ( 11) CACAGCTG 1 chr2L:811492-811612 ( 94) CACAGCTG 1 chr3R:8344324-8344444 ( 83) AGCAGCTG 1 chrX:2344642-2344762 ( 72) AGCAGCTG 1 chr2R:22870948-22871068 ( 96) CTCAGCTG 1 chr3L:11062607-11062727 ( 35) CTCAGCTG 1 chrX:14603690-14603810 ( 40) GACAGCTG 1 chr3R:18572968-18573088 ( 102) AACAGCGG 1 chrX:5695201-5695321 ( 26) ACCAGCTG 1 chr2L:292333-292453 ( 90) GTCAGCTG 1 chrX:476872-476992 ( 11) AACAGCTC 1 chr2R:22080036-22080156 ( 58) AACAGCTC 1 chr3R:25023167-25023287 ( 98) ATCAGCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.3926 E= 2.6e-022 146 -71 -199 -1200 96 -303 -199 16 -1200 232 -1200 -1200 173 -1200 -1200 -1200 -1200 -1200 237 -1200 -1200 232 -1200 -1200 -1200 -1200 -199 164 -1200 -203 229 -1200 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 41 E= 2.6e-022 0.829268 0.121951 0.048780 0.000000 0.585366 0.024390 0.048780 0.341463 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.048780 0.951220 0.000000 0.048780 0.951220 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-4 regular expression -------------------------------------------------------------------------------- A[AT]CAGCTG -------------------------------------------------------------------------------- Time 24.43 secs. ******************************************************************************** ******************************************************************************** MOTIF GYGTKRCC MEME-5 width = 8 sites = 30 llr = 283 E-value = 1.3e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::5:: pos.-specific C :3:2::aa probability G a:a:45:: matrix T :7:86::: bits 2.4 * * ** 2.1 * * ** 1.9 * * ** 1.7 * * ** Relative 1.4 * * ** Entropy 1.2 * ** *** (13.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GTGTTGCC consensus C GA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:9253088-9253208 24 8.29e-06 TCATGGAACA GTGTTGCC AGATGGCTTT chrX:8442313-8442433 17 1.36e-05 AATAACAAAA GTGTGGCC ACCGCATAAG chr2L:20926061-20926181 80 1.36e-05 AGAGCTGATA GTGTGGCC GTAGGTCGAA chr3R:16180618-16180738 93 1.90e-05 TTGGTGTCAA GCGTTGCC AGCGCACTGA chr3R:7155145-7155265 43 1.90e-05 TACAAGCCTG GCGTTGCC AGATCAGAGT chr2L:1502899-1503019 11 1.90e-05 AAATGAGGCA GCGTTGCC AGATCTTGGC chr2R:14526126-14526246 27 1.90e-05 TGTTGTCGCG GCGTTGCC ACCTGTTGGA chr3R:27929674-27929794 23 1.90e-05 AATACTCGTG GCGTTGCC ACATCATCCT chr2L:6448479-6448599 43 1.90e-05 TTTAGCGGGG GCGTTGCC AGACCTTCTC chr3L:3947413-3947533 94 1.90e-05 AACCGATTCG GCGTTGCC AATCTTTTGA chr3R:7973190-7973310 74 1.90e-05 GCGAAAACTG GCGTTGCC AGAAACTGGA chr2R:16240708-16240828 17 1.90e-05 GGCAAGGCAA GCGTTGCC CGATGTTGCG chr3L:8623866-8623986 35 1.90e-05 AAAACAATGG GCGTTGCC AGATGGTTCG chr3R:17040132-17040252 85 3.53e-05 TAATATTTTA GTGTTACC AGAAGTAAGC chr3R:20581518-20581638 25 3.53e-05 GTTTTTCTAT GTGTTACC AGATCGCATT chr2R:9822916-9823036 32 3.53e-05 CCCGCGTGTA GTGTTACC TCAGCTATTG chr3R:8343478-8343598 30 4.35e-05 AGAGCGAATA GTGTGACC TAATTTGGCA chr3R:30177645-30177765 51 4.35e-05 CTGTTCGGCA GTGTGACC TGAGTTTACT chr2R:22073323-22073443 52 4.35e-05 GTGGCGCGTA GTGTGACC GCTTTGGCGG chr3R:27695147-27695267 50 4.35e-05 TCTATTTGCA GTGTGACC ATAGCGCAAT chr2R:16283098-16283218 5 4.35e-05 ATTG GTGTGACC AAGGCTTGCT chr3L:5897398-5897518 52 4.35e-05 ATGTGCATTT GTGTGACC AGCCGAACAT chr3L:12206007-12206127 3 4.35e-05 CA GTGTGACC AAGGCCAATC chr3L:16782908-16783028 60 4.35e-05 CGAATGATTA GTGTGACC ATGCGGCGGT chr2R:17493332-17493452 45 4.35e-05 ATCGTTATTA GTGTGACC AATTTCGACT chr3R:5821389-5821509 21 6.27e-05 AACATCACGA GTGCTGCC AACTCGTTTT chr2R:12692677-12692797 56 6.27e-05 TTACAACTGT GTGCTGCC ACTTCTTTTT chr2R:13183904-13184024 15 6.27e-05 TGGCGCGCAA GTGCTGCC AAGAGTCAGC chr3L:20028994-20029114 40 8.04e-05 GATAAGATCA GTGCTACC AGACAGTTTA chr2R:24857337-24857457 14 8.04e-05 GCTTGAGTGC GTGCTACC CGTTTCTAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:9253088-9253208 8.3e-06 23_[+5]_89 chrX:8442313-8442433 1.4e-05 16_[+5]_96 chr2L:20926061-20926181 1.4e-05 79_[+5]_33 chr3R:16180618-16180738 1.9e-05 92_[+5]_20 chr3R:7155145-7155265 1.9e-05 42_[+5]_70 chr2L:1502899-1503019 1.9e-05 10_[+5]_102 chr2R:14526126-14526246 1.9e-05 26_[+5]_86 chr3R:27929674-27929794 1.9e-05 22_[+5]_90 chr2L:6448479-6448599 1.9e-05 42_[+5]_70 chr3L:3947413-3947533 1.9e-05 93_[+5]_19 chr3R:7973190-7973310 1.9e-05 73_[+5]_39 chr2R:16240708-16240828 1.9e-05 16_[+5]_96 chr3L:8623866-8623986 1.9e-05 34_[+5]_78 chr3R:17040132-17040252 3.5e-05 84_[+5]_28 chr3R:20581518-20581638 3.5e-05 24_[+5]_88 chr2R:9822916-9823036 3.5e-05 31_[+5]_81 chr3R:8343478-8343598 4.3e-05 29_[+5]_83 chr3R:30177645-30177765 4.3e-05 50_[+5]_62 chr2R:22073323-22073443 4.3e-05 51_[+5]_61 chr3R:27695147-27695267 4.3e-05 49_[+5]_63 chr2R:16283098-16283218 4.3e-05 4_[+5]_108 chr3L:5897398-5897518 4.3e-05 51_[+5]_61 chr3L:12206007-12206127 4.3e-05 2_[+5]_110 chr3L:16782908-16783028 4.3e-05 59_[+5]_53 chr2R:17493332-17493452 4.3e-05 44_[+5]_68 chr3R:5821389-5821509 6.3e-05 20_[+5]_92 chr2R:12692677-12692797 6.3e-05 55_[+5]_57 chr2R:13183904-13184024 6.3e-05 14_[+5]_98 chr3L:20028994-20029114 8e-05 39_[+5]_73 chr2R:24857337-24857457 8e-05 13_[+5]_99 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GYGTKRCC width=8 seqs=30 chr2L:9253088-9253208 ( 24) GTGTTGCC 1 chrX:8442313-8442433 ( 17) GTGTGGCC 1 chr2L:20926061-20926181 ( 80) GTGTGGCC 1 chr3R:16180618-16180738 ( 93) GCGTTGCC 1 chr3R:7155145-7155265 ( 43) GCGTTGCC 1 chr2L:1502899-1503019 ( 11) GCGTTGCC 1 chr2R:14526126-14526246 ( 27) GCGTTGCC 1 chr3R:27929674-27929794 ( 23) GCGTTGCC 1 chr2L:6448479-6448599 ( 43) GCGTTGCC 1 chr3L:3947413-3947533 ( 94) GCGTTGCC 1 chr3R:7973190-7973310 ( 74) GCGTTGCC 1 chr2R:16240708-16240828 ( 17) GCGTTGCC 1 chr3L:8623866-8623986 ( 35) GCGTTGCC 1 chr3R:17040132-17040252 ( 85) GTGTTACC 1 chr3R:20581518-20581638 ( 25) GTGTTACC 1 chr2R:9822916-9823036 ( 32) GTGTTACC 1 chr3R:8343478-8343598 ( 30) GTGTGACC 1 chr3R:30177645-30177765 ( 51) GTGTGACC 1 chr2R:22073323-22073443 ( 52) GTGTGACC 1 chr3R:27695147-27695267 ( 50) GTGTGACC 1 chr2R:16283098-16283218 ( 5) GTGTGACC 1 chr3L:5897398-5897518 ( 52) GTGTGACC 1 chr3L:12206007-12206127 ( 3) GTGTGACC 1 chr3L:16782908-16783028 ( 60) GTGTGACC 1 chr2R:17493332-17493452 ( 45) GTGTGACC 1 chr3R:5821389-5821509 ( 21) GTGCTGCC 1 chr2R:12692677-12692797 ( 56) GTGCTGCC 1 chr2R:13183904-13184024 ( 15) GTGCTGCC 1 chr3L:20028994-20029114 ( 40) GTGCTACC 1 chr2R:24857337-24857457 ( 14) GTGCTACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5523 E= 1.3e-006 -1155 -1155 237 -1155 -1155 74 -1155 113 -1155 -1155 237 -1155 -1155 -26 -1155 145 -1155 -1155 92 105 63 -1155 146 -1155 -1155 232 -1155 -1155 -1155 232 -1155 -1155 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 30 E= 1.3e-006 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.000000 1.000000 0.000000 0.000000 0.166667 0.000000 0.833333 0.000000 0.000000 0.366667 0.633333 0.466667 0.000000 0.533333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GYGTKRCC MEME-5 regular expression -------------------------------------------------------------------------------- G[TC]GT[TG][GA]CC -------------------------------------------------------------------------------- Time 29.77 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:21773998-21774118 1.92e-02 1_[+1(7.93e-05)]_111 chr3L:1333114-1333234 4.72e-03 67_[+2(5.96e-05)]_45 chr2R:9165607-9165727 8.39e-03 33_[+2(9.01e-05)]_39_[+2(3.00e-05)]_\ 32 chr3L:4510452-4510572 6.74e-03 6_[+3(4.64e-05)]_106 chr3R:24922395-24922515 2.16e-04 1_[+3(4.64e-05)]_37_[+2(3.00e-05)]_\ 66 chr2R:7793543-7793663 1.65e-02 36_[+3(4.64e-05)]_11_[+2(5.96e-05)]_\ 32_[+3(4.64e-05)]_17 chrX:19520511-19520631 1.72e-02 120 chr3L:17027458-17027578 6.24e-03 13_[+2(9.01e-05)]_46_[+1(7.93e-05)]_\ 45 chr2R:22332050-22332170 1.62e-06 10_[+4(2.52e-05)]_31_[+2(5.96e-05)]_\ 3_[+1(5.29e-06)]_15_[+2(5.96e-05)]_29 chr2L:19484665-19484785 2.70e-04 25_[+4(2.52e-05)]_87 chr3L:16390924-16391044 1.30e-04 63_[+2(3.00e-05)]_3_[+1(5.29e-06)]_\ 38 chr2R:8167850-8167970 2.64e-03 41_[+2(3.00e-05)]_71 chr2R:7709499-7709619 2.11e-03 90_[+1(5.29e-06)]_22 chr3L:8964642-8964762 8.29e-06 44_[+4(1.25e-05)]_7_[+2(5.96e-05)]_\ 11_[+1(5.29e-06)]_34 chr2R:6041875-6041995 9.01e-04 29_[+3(4.64e-05)]_83 chr3L:995806-995926 3.39e-03 82_[+1(5.29e-06)]_30 chr2R:23877939-23878059 5.66e-01 120 chrX:16783459-16783579 7.29e-02 120 chr3L:8623866-8623986 2.55e-04 34_[+5(1.90e-05)]_36_[+2(9.01e-05)]_\ 34 chr2L:8449524-8449644 7.87e-04 29_[+4(1.25e-05)]_83 chr3L:9824363-9824483 1.72e-02 120 chr3L:11062607-11062727 3.17e-04 34_[+4(5.00e-05)]_48_[+1(2.28e-05)]_\ 22 chr2L:811492-811612 7.07e-04 93_[+4(3.35e-05)]_19 chr3R:15839470-15839590 3.27e-02 120 chr3R:29202562-29202682 6.75e-04 71_[+2(3.00e-05)]_41 chrX:14226199-14226319 2.19e-01 120 chr3R:22380028-22380148 5.23e-04 36_[+2(3.00e-05)]_29_[+4(1.25e-05)]_\ 39 chr3L:16563505-16563625 9.85e-03 91_[+1(5.29e-06)]_21 chr3R:24054277-24054397 9.69e-03 55_[+1(2.28e-05)]_57 chr2R:17786038-17786158 1.20e-02 34_[+2(5.96e-05)]_78 chr2L:8400335-8400455 6.46e-02 33_[+2(9.01e-05)]_79 chr2R:13552422-13552542 4.39e-03 44_[+2(5.96e-05)]_68 chr2R:8939816-8939936 3.80e-03 83_[+2(3.00e-05)]_29 chr3R:9754653-9754773 9.79e-06 1_[+4(1.25e-05)]_74_[+3(4.64e-05)]_\ 1_[+1(2.28e-05)]_20 chr3L:12732883-12733003 7.80e-03 120 chr3R:15147996-15148116 2.32e-04 30_[+1(5.29e-06)]_82 chr2L:4331874-4331994 2.22e-01 120 chr2L:9968499-9968619 3.53e-04 37_[+2(3.00e-05)]_11_[+2(3.00e-05)]_\ 56 chr2R:17493332-17493452 3.13e-04 44_[+5(4.35e-05)]_68 chr3L:16495360-16495480 5.68e-02 120 chr2L:885096-885216 3.20e-01 120 chrX:5323776-5323896 8.39e-02 120 chr3L:16782908-16783028 2.23e-04 40_[+3(4.64e-05)]_11_[+5(4.35e-05)]_\ 53 chr2R:13183904-13184024 5.59e-05 5_[+1(2.28e-05)]_1_[+5(6.27e-05)]_9_\ [+1(4.61e-05)]_40_[+1(5.29e-06)]_33 chr2R:9822916-9823036 1.62e-03 31_[+5(3.53e-05)]_62_[+2(9.01e-05)]_\ 11 chr2L:3785555-3785675 4.84e-02 11_[+3(4.64e-05)]_101 chr3L:3940392-3940512 9.45e-05 13_[+2(3.00e-05)]_15_[+1(2.28e-05)]_\ 76 chr3L:8534545-8534665 2.91e-03 27_[+3(4.64e-05)]_16_[+2(3.00e-05)]_\ 13_[+2(5.96e-05)]_40 chr2R:19122099-19122219 5.95e-03 56_[+2(3.00e-05)]_56 chr3L:12206007-12206127 3.30e-04 2_[+5(4.35e-05)]_110 chrX:20427000-20427120 3.70e-04 40_[+4(2.52e-05)]_72 chr3R:15786618-15786738 2.50e-04 23_[+1(2.28e-05)]_35_[+4(1.25e-05)]_\ 46 chrX:13194409-13194529 1.11e-03 81_[+1(5.29e-06)]_31 chrX:2170572-2170692 3.46e-02 120 chrX:11459027-11459147 1.52e-02 120 chr2L:5526872-5526992 5.21e-04 46_[+2(9.01e-05)]_17_[+4(1.25e-05)]_\ 41 chr2R:23877614-23877734 2.24e-02 30_[+1(7.93e-05)]_82 chrX:8443081-8443201 3.67e-02 120 chrX:646559-646679 3.28e-03 18_[+1(4.61e-05)]_47_[+3(4.64e-05)]_\ 39 chr2L:11269680-11269800 1.32e-02 120 chr2L:5624180-5624300 1.81e-02 120 chr2R:14427087-14427207 1.21e-01 9_[+1(7.93e-05)]_103 chrX:14603690-14603810 8.40e-04 39_[+4(5.81e-05)]_73 chr2R:11844184-11844304 7.78e-03 104_[+1(1.39e-05)]_8 chr3L:17055457-17055577 8.95e-05 35_[+1(2.28e-05)]_77 chr2L:8040986-8041106 2.75e-03 16_[+1(5.29e-06)]_96 chr2L:9920072-9920192 4.89e-04 104_[+4(1.25e-05)]_8 chrX:336743-336863 1.18e-02 23_[+1(5.29e-06)]_67_[+1(5.66e-05)]_\ 14 chrX:18410206-18410326 1.69e-02 80_[+1(2.28e-05)]_32 chr3L:19913700-19913820 1.20e-01 120 chr2R:11442361-11442481 4.26e-02 120 chrX:5695201-5695321 4.97e-05 [+2(3.00e-05)]_17_[+4(7.44e-05)]_39_\ [+2(3.00e-05)]_8_[+3(4.64e-05)]_24 chr2R:16240708-16240828 4.30e-04 16_[+5(1.90e-05)]_87_[+3(4.64e-05)]_\ 1 chr3L:3457052-3457172 1.53e-02 92_[+1(5.66e-05)]_20 chr2R:10729277-10729397 2.11e-03 72_[+3(4.64e-05)]_8_[+1(1.39e-05)]_\ 24 chr3L:5897398-5897518 3.43e-04 30_[+2(3.00e-05)]_13_[+5(4.35e-05)]_\ 61 chr2L:20427531-20427651 1.84e-03 58_[+1(4.61e-05)]_2_[+2(5.96e-05)]_\ 44 chr3R:7973190-7973310 2.68e-03 17_[+3(4.64e-05)]_48_[+5(1.90e-05)]_\ 39 chr3R:11429953-11430073 5.18e-02 31_[+3(4.64e-05)]_81 chr2R:19390003-19390123 1.83e-02 120 chrX:8265397-8265517 3.10e-03 94_[+1(2.28e-05)]_1_[+3(4.64e-05)]_\ 9 chr3L:16100157-16100277 2.36e-02 120 chr3R:8807233-8807353 6.94e-03 76_[+1(1.39e-05)]_36 chr3R:18572968-18573088 2.99e-02 101_[+4(6.61e-05)]_11 chr2R:24857337-24857457 3.04e-04 13_[+5(8.04e-05)]_66_[+1(5.29e-06)]_\ 25 chr2R:19502967-19503087 1.89e-02 3_[+1(5.29e-06)]_109 chr3L:3947413-3947533 2.80e-04 16_[+3(4.64e-05)]_69_[+5(1.90e-05)]_\ 19 chr3L:8071783-8071903 7.15e-04 33_[+1(8.81e-06)]_79 chrX:6687413-6687533 3.53e-03 60_[+2(3.00e-05)]_52 chr3R:10052830-10052950 7.83e-02 120 chr3L:7975052-7975172 8.26e-02 120 chr3L:17035542-17035662 5.94e-04 15_[+1(4.61e-05)]_64_[+2(3.00e-05)]_\ 25 chr3L:1331664-1331784 3.96e-02 120 chr2L:292333-292453 9.45e-03 89_[+4(8.26e-05)]_23 chr2R:16957381-16957501 6.22e-03 92_[+4(2.52e-05)]_20 chr3R:25023167-25023287 7.56e-03 120 chr2L:14334037-14334157 1.98e-02 47_[+2(9.01e-05)]_65 chr2R:21560106-21560226 5.41e-02 120 chr2L:106707-106827 6.86e-03 120 chr2R:11841506-11841626 1.92e-02 12_[+2(9.01e-05)]_58_[+4(2.52e-05)]_\ 34 chr2L:4979312-4979432 3.05e-04 42_[+4(2.52e-05)]_16_[+1(1.39e-05)]_\ 46 chr2L:2815826-2815946 1.00e-03 78_[+1(5.29e-06)]_34 chr3R:21878654-21878774 8.63e-05 25_[+4(1.25e-05)]_6_[+2(5.96e-05)]_\ 73 chrX:2617593-2617713 3.54e-01 120 chrX:11459416-11459536 1.04e-02 120 chr3L:11728251-11728371 1.43e-03 18_[+1(2.28e-05)]_5_[+2(5.96e-05)]_\ 81 chr2R:10557151-10557271 5.51e-06 22_[+1(5.29e-06)]_2_[+2(3.00e-05)]_\ 80 chr3R:19642727-19642847 9.91e-03 38_[+2(3.00e-05)]_74 chrX:17106295-17106415 7.77e-02 120 chr3L:21210071-21210191 1.47e-02 120 chrX:17629462-17629582 2.65e-03 106_[+1(8.81e-06)]_6 chr2L:10483187-10483307 2.03e-04 62_[+2(9.01e-05)]_10_[+2(3.00e-05)]_\ 32 chr2R:20870686-20870806 3.18e-02 120 chrX:1900601-1900721 5.13e-02 120 chr2L:15764135-15764255 1.68e-03 13_[+1(2.28e-05)]_99 chr3L:20541132-20541252 3.19e-02 120 chr2L:1147719-1147839 6.72e-05 49_[+1(5.29e-06)]_14_[+2(3.00e-05)]_\ 41 chr3L:18821122-18821242 1.55e-01 120 chr3R:10767771-10767891 1.15e-03 107_[+1(5.29e-06)]_5 chr2R:23878324-23878444 3.00e-02 120 chr3L:20113197-20113317 2.62e-03 82_[+1(5.29e-06)]_9_[+3(4.64e-05)]_\ 13 chr2R:16283098-16283218 1.12e-01 4_[+5(4.35e-05)]_108 chr2L:1504416-1504536 6.69e-02 120 chr2R:7712018-7712138 4.39e-03 50_[+2(3.00e-05)]_62 chrX:8129357-8129477 1.00e-04 27_[+1(2.28e-05)]_22_[+2(3.00e-05)]_\ 9_[+2(3.00e-05)]_38 chrX:20389699-20389819 6.67e-02 120 chr3R:8561654-8561774 1.44e-02 120 chrX:8240552-8240672 2.85e-02 120 chr2L:11282019-11282139 1.13e-02 67_[+2(5.96e-05)]_3_[+2(5.96e-05)]_\ 34 chr2L:20926061-20926181 7.42e-04 58_[+1(3.17e-05)]_13_[+5(1.36e-05)]_\ 33 chr3R:30443849-30443969 7.96e-02 120 chr3R:15367649-15367769 2.61e-02 69_[+2(3.00e-05)]_43 chr2R:12692677-12692797 2.43e-06 10_[+4(3.35e-05)]_37_[+5(6.27e-05)]_\ 16_[+1(1.39e-05)]_33 chr2R:22870948-22871068 3.94e-04 7_[+3(4.64e-05)]_80_[+4(5.00e-05)]_\ 17 chr2R:22080036-22080156 2.59e-04 39_[+1(2.28e-05)]_73 chrX:15732035-15732155 3.54e-03 107_[+2(9.01e-05)]_5 chrX:16695163-16695283 5.31e-01 120 chr2R:20319046-20319166 3.50e-02 9_[+1(5.29e-06)]_103 chrX:1821195-1821315 6.13e-01 120 chr2R:12510790-12510910 8.46e-04 17_[+2(3.00e-05)]_61_[+1(2.64e-05)]_\ 26 chrX:1865793-1865913 3.52e-02 50_[+2(3.00e-05)]_62 chrX:15769574-15769694 5.36e-02 19_[+3(4.64e-05)]_93 chrX:13211913-13212033 5.23e-03 63_[+2(3.00e-05)]_49 chr2R:6459847-6459967 4.96e-02 76_[+4(2.52e-05)]_36 chr3L:1735751-1735871 1.47e-02 120 chr2R:12521324-12521444 3.06e-03 120 chr3R:25235514-25235634 2.50e-02 120 chr3L:4277879-4277999 1.07e-01 120 chr3R:10815180-10815300 1.23e-03 59_[+4(1.25e-05)]_53 chrX:14603942-14604062 8.11e-03 120 chrX:11615782-11615902 1.91e-03 70_[+2(5.96e-05)]_42 chr2L:11948587-11948707 2.28e-01 120 chr2L:560351-560471 2.35e-03 63_[+2(3.00e-05)]_49 chr2R:18710820-18710940 2.16e-03 48_[+2(3.00e-05)]_41_[+4(1.25e-05)]_\ 15 chr2L:16261726-16261846 7.00e-03 93_[+3(4.64e-05)]_19 chr3R:9748026-9748146 2.31e-01 59_[+3(4.64e-05)]_53 chr2L:9253088-9253208 2.17e-02 23_[+5(8.29e-06)]_89 chr2L:8220691-8220811 5.78e-04 42_[+2(5.96e-05)]_43_[+3(4.64e-05)]_\ 19 chr2R:18711064-18711184 9.54e-01 120 chrX:11621405-11621525 7.70e-03 75_[+2(9.01e-05)]_37 chrX:5941925-5942045 3.38e-04 26_[+1(5.29e-06)]_86 chr2L:6448479-6448599 1.01e-03 42_[+5(1.90e-05)]_39_[+1(7.93e-05)]_\ 23 chr3R:5821389-5821509 2.47e-03 20_[+5(6.27e-05)]_92 chr2L:18714233-18714353 3.98e-01 120 chrX:16321206-16321326 6.89e-02 72_[+1(8.46e-05)]_40 chrX:13667814-13667934 6.65e-01 120 chr2R:13414677-13414797 2.33e-03 92_[+1(3.17e-05)]_20 chr2R:8683012-8683132 1.33e-02 120 chr3R:29503901-29504021 2.44e-02 120 chrX:2344642-2344762 5.15e-03 71_[+4(5.00e-05)]_41 chr3R:27695147-27695267 2.89e-03 49_[+5(4.35e-05)]_63 chr3L:7094204-7094324 5.28e-04 68_[+2(3.00e-05)]_44 chr3L:13866927-13867047 3.70e-05 61_[+2(9.01e-05)]_42_[+3(4.64e-05)]_\ 1 chr2R:18705869-18705989 1.88e-03 20_[+1(3.71e-05)]_6_[+2(9.01e-05)]_\ 78 chr2R:22073323-22073443 2.35e-03 43_[+1(7.93e-05)]_[+5(4.35e-05)]_61 chr2L:8305500-8305620 9.50e-02 33_[+2(5.96e-05)]_79 chr3L:3461248-3461368 5.33e-01 120 chrX:17924191-17924311 4.54e-02 120 chrX:20162710-20162830 1.41e-02 18_[+1(4.61e-05)]_94 chr3R:18230381-18230501 1.00e-03 26_[+1(2.28e-05)]_86 chrX:15841435-15841555 1.16e-04 46_[+1(8.81e-06)]_48_[+2(3.00e-05)]_\ 10 chr3R:7902641-7902761 2.47e-03 92_[+1(8.81e-06)]_20 chr2L:17433317-17433437 6.92e-03 1_[+1(6.02e-05)]_62_[+1(1.39e-05)]_\ 41 chr3L:20788109-20788229 2.12e-04 65_[+1(8.46e-05)]_1_[+1(5.29e-06)]_\ 38 chrX:4647744-4647864 1.95e-03 38_[+3(4.64e-05)]_74 chrX:7066787-7066907 6.72e-03 120 chr3R:30177645-30177765 7.27e-04 35_[+4(2.52e-05)]_7_[+5(4.35e-05)]_\ 62 chr2L:13790851-13790971 3.29e-01 120 chr2L:4830686-4830806 5.33e-04 4_[+2(3.00e-05)]_108 chrX:4627284-4627404 2.37e-03 120 chr2L:16326999-16327119 1.04e-01 120 chrX:9273305-9273425 2.44e-02 120 chr3R:20581518-20581638 1.06e-02 24_[+5(3.53e-05)]_88 chr3R:7643676-7643796 1.27e-03 62_[+2(3.00e-05)]_50 chr3R:27929674-27929794 4.75e-05 22_[+5(1.90e-05)]_13_[+2(5.96e-05)]_\ 69 chr2R:14993817-14993937 4.97e-03 120 chr2R:11853147-11853267 5.29e-02 120 chr3L:20028994-20029114 5.01e-06 39_[+5(8.04e-05)]_11_[+4(1.25e-05)]_\ 13_[+2(9.01e-05)]_33 chr3R:16651099-16651219 1.64e-02 67_[+2(3.00e-05)]_45 chr3R:8344324-8344444 2.10e-04 19_[+1(4.61e-05)]_55_[+4(5.00e-05)]_\ 30 chr3R:17040132-17040252 4.41e-03 84_[+5(3.53e-05)]_28 chr3R:8343478-8343598 2.75e-02 29_[+5(4.35e-05)]_83 chr2L:20223109-20223229 7.39e-01 120 chr2R:13415045-13415165 4.47e-01 120 chr2R:14526126-14526246 5.24e-06 10_[+4(1.25e-05)]_8_[+5(1.90e-05)]_\ 26_[+1(2.28e-05)]_52 chr3L:15576514-15576634 5.14e-04 62_[+2(3.00e-05)]_50 chr2R:8435039-8435159 1.90e-01 120 chr2L:2758281-2758401 1.81e-01 120 chrX:8461210-8461330 3.83e-03 39_[+2(3.00e-05)]_73 chr3L:9364285-9364405 8.29e-03 59_[+4(1.25e-05)]_53 chr2L:1502899-1503019 1.69e-05 10_[+5(1.90e-05)]_11_[+4(3.35e-05)]_\ 83 chrX:3174984-3175104 7.73e-02 1_[+2(3.00e-05)]_111 chr2L:13382444-13382564 9.21e-01 120 chrX:10385077-10385197 2.70e-05 37_[+5(9.48e-05)]_7_[+2(3.00e-05)]_\ 34_[+4(1.25e-05)]_18 chrX:19618499-19618619 6.51e-04 14_[+4(1.25e-05)]_98 chr3R:7155145-7155265 6.24e-04 42_[+5(1.90e-05)]_50_[+1(2.28e-05)]_\ 12 chr2R:8170162-8170282 5.62e-02 120 chr3L:19979809-19979929 9.10e-02 106_[+1(7.93e-05)]_6 chr3R:18385721-18385841 9.08e-02 120 chr3L:9974312-9974432 2.86e-02 31_[+1(2.28e-05)]_81 chr3R:9254961-9255081 3.09e-03 40_[+2(5.96e-05)]_72 chr2R:13205311-13205431 3.22e-05 24_[+4(2.52e-05)]_12_[+1(5.29e-06)]_\ 68 chr2R:17670005-17670125 1.83e-02 120 chr3R:8217870-8217990 1.20e-03 11_[+2(5.96e-05)]_32_[+2(5.96e-05)]_\ 16_[+4(1.25e-05)]_37 chr3L:13040990-13041110 3.64e-02 120 chr2R:24017218-24017338 1.53e-04 77_[+1(2.28e-05)]_35 chrX:476872-476992 3.18e-04 32_[+3(4.64e-05)]_80 chr3L:10882770-10882890 1.44e-03 28_[+1(8.81e-06)]_84 chr2R:24668308-24668428 4.41e-04 29_[+4(1.25e-05)]_83 chr3R:27679126-27679246 4.70e-02 120 chr3L:18865541-18865661 9.50e-02 37_[+2(5.96e-05)]_75 chrX:8442313-8442433 1.53e-05 16_[+5(1.36e-05)]_69_[+1(5.29e-06)]_\ 19 chrX:15572098-15572218 1.22e-04 18_[+4(2.52e-05)]_94 chr3L:8180818-8180938 3.97e-02 120 chr2L:5525801-5525921 8.37e-04 66_[+2(9.01e-05)]_13_[+4(5.00e-05)]_\ 25 chr3R:16180618-16180738 2.87e-02 92_[+5(1.90e-05)]_20 chr2L:9089674-9089794 3.42e-01 120 chr3L:1756237-1756357 2.35e-02 29_[+1(2.28e-05)]_83 chr3R:29993374-29993494 6.73e-02 120 chr3R:22381235-22381355 1.96e-03 63_[+2(3.00e-05)]_49 chr2R:7516329-7516449 2.09e-02 66_[+2(3.00e-05)]_46 chr3R:23053466-23053586 5.33e-05 81_[+2(9.01e-05)]_11_[+3(4.64e-05)]_\ 12 chr2R:9039544-9039664 1.09e-01 120 chr2R:12923763-12923883 2.07e-04 49_[+2(3.00e-05)]_63 chr2R:7961832-7961952 1.07e-03 78_[+2(9.01e-05)]_34 chr3L:12399345-12399465 4.64e-01 120 chr2R:23843259-23843379 3.22e-02 120 chr3L:19913905-19914025 2.86e-01 120 chr2R:17563500-17563620 9.74e-02 120 chr2L:4198354-4198474 5.70e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n04.farnam.hpc.yale.internal ********************************************************************************