******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dfd.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3R:31765284-31765404 1.0000 120 chr3R:9744154-9744274 1.0000 120 chr3L:8437753-8437873 1.0000 120 chr3R:18422611-18422731 1.0000 120 chr2R:21164430-21164550 1.0000 120 chr3R:31577490-31577610 1.0000 120 chr3R:19040824-19040944 1.0000 120 chrX:17218691-17218811 1.0000 120 chr3L:20192014-20192134 1.0000 120 chr3L:888511-888631 1.0000 120 chr2R:24327079-24327199 1.0000 120 chr3R:18195434-18195554 1.0000 120 chr3R:5176083-5176203 1.0000 120 chr2L:5321143-5321263 1.0000 120 chr3L:9708951-9709071 1.0000 120 chr3L:2871319-2871439 1.0000 120 chr2L:8659688-8659808 1.0000 120 chr3L:19844646-19844766 1.0000 120 chr3R:30878263-30878383 1.0000 120 chr2R:13396574-13396694 1.0000 120 chr2R:23349975-23350095 1.0000 120 chr2R:15591184-15591304 1.0000 120 chr2L:1253374-1253494 1.0000 120 chr2R:14712934-14713054 1.0000 120 chr2R:18281210-18281330 1.0000 120 chrX:12831462-12831582 1.0000 120 chr3R:19524625-19524745 1.0000 120 chr2R:21163328-21163448 1.0000 120 chr3L:17663786-17663906 1.0000 120 chr3L:17077412-17077532 1.0000 120 chr3R:12185754-12185874 1.0000 120 chr3L:6750977-6751097 1.0000 120 chr2L:7025422-7025542 1.0000 120 chr3R:12975362-12975482 1.0000 120 chr3R:29362549-29362669 1.0000 120 chrX:7662564-7662684 1.0000 120 chr3R:23920526-23920646 1.0000 120 chr2R:11810733-11810853 1.0000 120 chr3L:4590190-4590310 1.0000 120 chr3R:17905279-17905399 1.0000 120 chrX:5080660-5080780 1.0000 120 chr3L:21718372-21718492 1.0000 120 chr3R:5877506-5877626 1.0000 120 chr3L:27069265-27069385 1.0000 120 chr2R:20958667-20958787 1.0000 120 chr2L:5821069-5821189 1.0000 120 chr3R:30360828-30360948 1.0000 120 chr2L:17437733-17437853 1.0000 120 chr3L:9840849-9840969 1.0000 120 chr2R:9772203-9772323 1.0000 120 chr2R:13327309-13327429 1.0000 120 chr2R:6898342-6898462 1.0000 120 chr2L:21622329-21622449 1.0000 120 chr3L:2442469-2442589 1.0000 120 chrX:13530528-13530648 1.0000 120 chr3L:13430310-13430430 1.0000 120 chr3L:15605103-15605223 1.0000 120 chrX:6716309-6716429 1.0000 120 chrX:10618630-10618750 1.0000 120 chr3R:20011081-20011201 1.0000 120 chr2R:14508769-14508889 1.0000 120 chr2R:22363343-22363463 1.0000 120 chr2L:20057530-20057650 1.0000 120 chr2R:18746006-18746126 1.0000 120 chr3R:12301667-12301787 1.0000 120 chrX:4358654-4358774 1.0000 120 chr2R:19159838-19159958 1.0000 120 chr2R:14040277-14040397 1.0000 120 chr2R:19183230-19183350 1.0000 120 chr3L:10585077-10585197 1.0000 120 chr3R:24079752-24079872 1.0000 120 chr2L:18546565-18546685 1.0000 120 chr4:332407-332527 1.0000 120 chr3L:11542576-11542696 1.0000 120 chr2L:17973138-17973258 1.0000 120 chr2R:10612127-10612247 1.0000 120 chrX:9396978-9397098 1.0000 120 chr3R:29695883-29696003 1.0000 120 chrX:17597761-17597881 1.0000 120 chr2R:14032758-14032878 1.0000 120 chr2R:5130816-5130936 1.0000 120 chr2L:5320206-5320326 1.0000 120 chr3L:6947711-6947831 1.0000 120 chr2L:21726236-21726356 1.0000 120 chr3L:5327960-5328080 1.0000 120 chr3R:14578248-14578368 1.0000 120 chr3R:31370334-31370454 1.0000 120 chr2L:9994539-9994659 1.0000 120 chr2R:11208466-11208586 1.0000 120 chrX:17763761-17763881 1.0000 120 chrX:6740149-6740269 1.0000 120 chrX:10607768-10607888 1.0000 120 chr2R:7740521-7740641 1.0000 120 chr3L:11604339-11604459 1.0000 120 chr3L:7161449-7161569 1.0000 120 chr2L:3605812-3605932 1.0000 120 chr3L:9045035-9045155 1.0000 120 chr3L:14025848-14025968 1.0000 120 chrX:12545315-12545435 1.0000 120 chrX:16575236-16575356 1.0000 120 chrX:9423062-9423182 1.0000 120 chr3L:9262407-9262527 1.0000 120 chrX:21333274-21333394 1.0000 120 chr2R:10990095-10990215 1.0000 120 chr3L:16141695-16141815 1.0000 120 chr2L:16808891-16809011 1.0000 120 chrX:7246209-7246329 1.0000 120 chr2L:17402632-17402752 1.0000 120 chr3R:27533364-27533484 1.0000 120 chr3R:11441177-11441297 1.0000 120 chrX:9694792-9694912 1.0000 120 chrX:3132084-3132204 1.0000 120 chr2R:7910419-7910539 1.0000 120 chrX:9296657-9296777 1.0000 120 chr2L:13498064-13498184 1.0000 120 chr3R:14965424-14965544 1.0000 120 chr2R:8855390-8855510 1.0000 120 chrX:12715083-12715203 1.0000 120 chr2R:5966003-5966123 1.0000 120 chr3L:9471411-9471531 1.0000 120 chr2L:20434918-20435038 1.0000 120 chr4:149262-149382 1.0000 120 chr3L:3150589-3150709 1.0000 120 chr3L:4729944-4730064 1.0000 120 chrX:9093201-9093321 1.0000 120 chr3R:7275112-7275232 1.0000 120 chr3L:21230901-21231021 1.0000 120 chrX:18350748-18350868 1.0000 120 chrX:1715013-1715133 1.0000 120 chr2R:6198557-6198677 1.0000 120 chr3R:9232499-9232619 1.0000 120 chr3L:2328943-2329063 1.0000 120 chr3R:11375281-11375401 1.0000 120 chr2R:1595434-1595554 1.0000 120 chr2L:20020230-20020350 1.0000 120 chr3R:19725723-19725843 1.0000 120 chr2L:594187-594307 1.0000 120 chr3L:21436212-21436332 1.0000 120 chr3L:21871912-21872032 1.0000 120 chr2R:21583187-21583307 1.0000 120 chr3R:6801292-6801412 1.0000 120 chr2L:1975612-1975732 1.0000 120 chrX:17940816-17940936 1.0000 120 chr3R:29767353-29767473 1.0000 120 chr2R:5108119-5108239 1.0000 120 chr2L:241554-241674 1.0000 120 chr3R:21445466-21445586 1.0000 120 chr2R:11506068-11506188 1.0000 120 chr2L:21689507-21689627 1.0000 120 chr2R:4343763-4343883 1.0000 120 chr3R:15627413-15627533 1.0000 120 chr3R:28237936-28238056 1.0000 120 chr2L:11236503-11236623 1.0000 120 chr2R:22466608-22466728 1.0000 120 chr3L:12329688-12329808 1.0000 120 chr2L:9266199-9266319 1.0000 120 chrX:10340631-10340751 1.0000 120 chr3L:7890105-7890225 1.0000 120 chr2L:20690219-20690339 1.0000 120 chr2R:11645676-11645796 1.0000 120 chrX:7686210-7686330 1.0000 120 chr3L:7624700-7624820 1.0000 120 chr3L:14125755-14125875 1.0000 120 chr3R:28775842-28775962 1.0000 120 chr2L:19594241-19594361 1.0000 120 chr2R:7851638-7851758 1.0000 120 chr3L:18124277-18124397 1.0000 120 chr2R:10233930-10234050 1.0000 120 chr3R:22602922-22603042 1.0000 120 chr2L:5610768-5610888 1.0000 120 chrX:12708445-12708565 1.0000 120 chr3R:4362149-4362269 1.0000 120 chr3L:16851705-16851825 1.0000 120 chr2R:4676956-4677076 1.0000 120 chr2R:4802210-4802330 1.0000 120 chr2R:21221402-21221522 1.0000 120 chr2L:22163441-22163561 1.0000 120 chr3L:21549993-21550113 1.0000 120 chr3R:31066267-31066387 1.0000 120 chrX:7714031-7714151 1.0000 120 chr4:1121051-1121171 1.0000 120 chr3R:18011470-18011590 1.0000 120 chr2R:5154278-5154398 1.0000 120 chr2R:17075625-17075745 1.0000 120 chr3R:9191839-9191959 1.0000 120 chr3R:18236771-18236891 1.0000 120 chr3R:9895315-9895435 1.0000 120 chrX:9204040-9204160 1.0000 120 chr3R:15246186-15246306 1.0000 120 chr3L:11524468-11524588 1.0000 120 chr3L:7764888-7765008 1.0000 120 chr2R:15658717-15658837 1.0000 120 chr3R:24716815-24716935 1.0000 120 chr3R:13873523-13873643 1.0000 120 chr3L:2789555-2789675 1.0000 120 chrX:20357619-20357739 1.0000 120 chr2L:21383675-21383795 1.0000 120 chr3R:31660976-31661096 1.0000 120 chr3L:23001154-23001274 1.0000 120 chr2L:1864018-1864138 1.0000 120 chr2R:1233766-1233886 1.0000 120 chr2L:11255853-11255973 1.0000 120 chr2R:7046904-7047024 1.0000 120 chr3R:8167213-8167333 1.0000 120 chr2R:24333540-24333660 1.0000 120 chr2L:22003047-22003167 1.0000 120 chr2R:22260723-22260843 1.0000 120 chr2R:5209820-5209940 1.0000 120 chrX:6917748-6917868 1.0000 120 chr3R:15399124-15399244 1.0000 120 chrX:21473271-21473391 1.0000 120 chr3R:20820181-20820301 1.0000 120 chr2L:9745874-9745994 1.0000 120 chrX:10202249-10202369 1.0000 120 chr3R:16827730-16827850 1.0000 120 chrX:6964265-6964385 1.0000 120 chr3L:11602924-11603044 1.0000 120 chrX:3472614-3472734 1.0000 120 chrX:6693639-6693759 1.0000 120 chr4:233643-233763 1.0000 120 chr3R:11460266-11460386 1.0000 120 chr2L:20953203-20953323 1.0000 120 chr4:515936-516056 1.0000 120 chr3L:10870189-10870309 1.0000 120 chrX:5741734-5741854 1.0000 120 chrX:11216142-11216262 1.0000 120 chr3R:30109542-30109662 1.0000 120 chr2L:6888241-6888361 1.0000 120 chr3L:22063348-22063468 1.0000 120 chr2R:18763039-18763159 1.0000 120 chr3R:26085744-26085864 1.0000 120 chr2L:12129115-12129235 1.0000 120 chr2L:12276874-12276994 1.0000 120 chrX:7689031-7689151 1.0000 120 chr3L:8369930-8370050 1.0000 120 chr3L:14024842-14024962 1.0000 120 chr2L:7866048-7866168 1.0000 120 chr3L:14027717-14027837 1.0000 120 chr2R:6030565-6030685 1.0000 120 chr3R:4736219-4736339 1.0000 120 chr3L:9996526-9996646 1.0000 120 chr3R:4268606-4268726 1.0000 120 chrX:8185049-8185169 1.0000 120 chrX:2960514-2960634 1.0000 120 chr2R:14680332-14680452 1.0000 120 chrX:8739027-8739147 1.0000 120 chrX:7310561-7310681 1.0000 120 chr2R:12219620-12219740 1.0000 120 chr3L:23300402-23300522 1.0000 120 chrX:18895036-18895156 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_Dfd/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/Dfd.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.23 C 0.26 G 0.271 T 0.238 Background letter frequencies (from file dataset with add-one prior applied): A 0.23 C 0.26 G 0.271 T 0.238 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GCWGCWGC MEME-1 width = 8 sites = 130 llr = 1200 E-value = 2.3e-159 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::4::4:: pos.-specific C :a::a::a probability G a::a::a: matrix T ::6::6:: bits 2.1 1.9 * ** ** 1.7 ** ** ** 1.5 ** ** ** Relative 1.3 ** ** ** Entropy 1.1 ******** (13.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCTGCTGC consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:14027717-14027837 55 1.98e-05 tgttgttgtt gctgctgc tgctgctgct chr2L:7866048-7866168 56 1.98e-05 tgctgctgct gctgctgc tgctgctgTT chr3L:14024842-14024962 96 1.98e-05 tgctgcggct gctgctgc atttgcatcc chr3L:8369930-8370050 60 1.98e-05 ggctgctgtt gctgctgc tACTTCCACT chrX:7689031-7689151 85 1.98e-05 tgttgctgct gctgctgc tgctgctgct chr2L:20953203-20953323 72 1.98e-05 tgttgttgtt gctgctgc tgccatccgc chrX:6693639-6693759 101 1.98e-05 tgctgatgct gctgctgc tgttgttgat chrX:3472614-3472734 68 1.98e-05 cgctgctgtt gctgctgc tTGACTGGCG chr3R:16827730-16827850 19 1.98e-05 tgttgttgtt gctgctgc tgcttggact chr3R:20820181-20820301 68 1.98e-05 tgctgttgtt gctgctgc tgctgctgct chr2R:24333540-24333660 86 1.98e-05 tgctgttgtt gctgctgc tgctgcGCCG chr3R:8167213-8167333 77 1.98e-05 tgctgttgct gctgctgc tgctgttgct chr3L:2789555-2789675 62 1.98e-05 tgttgctgct gctgctgc tgttgctgct chr3R:13873523-13873643 8 1.98e-05 tgttgtt gctgctgc tgttgctgct chr3L:7764888-7765008 92 1.98e-05 TGCAGATTCT GCTGCTGC TGCATCATCA chr3L:11524468-11524588 35 1.98e-05 GGTCGAGGAC GCTGCTGC AGTTGCTCCG chr2R:17075625-17075745 49 1.98e-05 ccagcttttt gctgctgc tgctggtgcg chrX:7714031-7714151 44 1.98e-05 tgctgctgct gctgctgc tgttgctgct chr2R:21221402-21221522 50 1.98e-05 ctgggcagtt gctgctgc tgctgccgcc chr2R:10233930-10234050 87 1.98e-05 tgttgctgct gctgctgc tgctgatgtt chr3L:14125755-14125875 68 1.98e-05 TGGTGCTGAT GCTGCTGC TGATGCTGTG chrX:7686210-7686330 49 1.98e-05 tgatgatgtt gctgctgc tgttgctgtt chr2L:20690219-20690339 24 1.98e-05 tcccgcttct gctgctgc tgctgttgct chr2L:241554-241674 15 1.98e-05 tgactctgct gctgctgc tgttgttgtt chrX:17940816-17940936 84 1.98e-05 ttttgctgct gctgctgc tgctgttgct chr3R:19725723-19725843 39 1.98e-05 AAGTAGTTTG GCTGCTGC GGCTCCCCTG chr3R:9232499-9232619 68 1.98e-05 tgcaactgcg gctgctgc CTGTGATATC chr3R:7275112-7275232 51 1.98e-05 tgttgttgtt gctgctgc tgctgctgGG chrX:12715083-12715203 20 1.98e-05 tgttgctgct gctgctgc tgctgctgct chr3R:14965424-14965544 58 1.98e-05 TGCTGCTAGT GCTGCTGC CCCCTCCCCC chr2L:16808891-16809011 87 1.98e-05 TTGCTGCGTt gctgctgc tgctgctgct chr2R:10990095-10990215 34 1.98e-05 tgccgctgat gctgctgc tgctactgtg chrX:21333274-21333394 54 1.98e-05 tggtgttgct gctgctgc tgctgctggt chr3L:14025848-14025968 100 1.98e-05 tgttgtggtt gctgctgc tgctgctgtt chr2L:3605812-3605932 54 1.98e-05 tgttgctgct gctgctgc atctgcagcc chr3L:7161449-7161569 63 1.98e-05 GCctgctgct gctgctgc tgctgctgtt chr2R:7740521-7740641 85 1.98e-05 TGCTGACgct gctgctgc tgctgctgct chrX:10607768-10607888 32 1.98e-05 TACTGCGGAt gctgctgc tgcggatcgt chr2L:5320206-5320326 57 1.98e-05 cgctgctgtt gctgctgc tgttgttgct chr3L:11542576-11542696 6 1.98e-05 atgtt gctgctgc tgctgctgct chr2L:18546565-18546685 59 1.98e-05 tgttgctgtt gctgctgc tgttgttgct chrX:10618630-10618750 92 1.98e-05 tgctgccggc gctgctgc gacgcgaatg chr3L:13430310-13430430 78 1.98e-05 CTGTAGtgct gctgctgc tgatgctgct chr2R:9772203-9772323 70 1.98e-05 gtcgataatt gctgctgc tgctgcagtt chr3L:9840849-9840969 69 1.98e-05 tgaagttgct gctgctgc tgctgttgct chr2L:17437733-17437853 15 1.98e-05 tgctgatgct gctgctgc tgGGCAAGGA chr2R:20958667-20958787 59 1.98e-05 tgttgcgagt gctgctgc tgctgctgat chr3R:5877506-5877626 77 1.98e-05 agctgatgtt gctgctgc tgttggtgct chr3L:21718372-21718492 26 1.98e-05 ATCCTCATCT GCTGCTGC CACGCCCCAC chrX:5080660-5080780 40 1.98e-05 ggcagctgcg gctgctgc tgcggtcggt chr3R:17905279-17905399 55 1.98e-05 tgctgatgct gctgctgc ctggccgcaa chr3R:23920526-23920646 16 1.98e-05 tgatgttgct gctgctgc tgATGCACCG chr2L:7025422-7025542 104 1.98e-05 tgcgacggct gctgctgc tgttgctgc chr3L:6750977-6751097 13 1.98e-05 ggctcctgtt gctgctgc tgatagtgaa chr3L:17077412-17077532 75 1.98e-05 tgttgttgct gctgctgc tgttgctgct chr3L:17663786-17663906 47 1.98e-05 tgttgttgct gctgctgc tggtgttgct chrX:12831462-12831582 65 1.98e-05 tgttgttgct gctgctgc tgctgcagtt chr2R:18281210-18281330 74 1.98e-05 tgggcctggt gctgctgc tgcaggtgct chr2R:13396574-13396694 83 1.98e-05 tgctgttgtg gctgctgc ggtggttgct chr3R:30878263-30878383 78 1.98e-05 tgctgttggt gctgctgc tgttgcggat chr3L:2871319-2871439 79 1.98e-05 CAGtgctgct gctgctgc tgctgctgtt chr2L:5321143-5321263 53 1.98e-05 gaagtttgtt gctgctgc tgatgttgct chr3R:5176083-5176203 11 1.98e-05 tgctgcagct gctgctgc gccgactgct chr3R:18422611-18422731 50 1.98e-05 GCATTGtgct gctgctgc tggtggtgtt chr3L:8437753-8437873 54 1.98e-05 tgttgttgct gctgctgc tgcatgtgtt chr3R:11375281-11375401 109 3.90e-05 atctgcaaca gctgcagc aaca chr2R:11208466-11208586 57 3.90e-05 ggccaacatc gctgcagc aattgcattg chr3L:6947711-6947831 31 3.90e-05 aacagctaca gctgcagc agcaacagca chr2R:10612127-10612247 92 3.90e-05 cccagagtca gctgcagc agcaacagca chr2R:18746006-18746126 18 3.90e-05 aacatctgca gctgcagc agcagcaaca chr3R:20011081-20011201 57 3.90e-05 cgcccatgga gctgcagc agcaacagca chr3L:888511-888631 69 3.90e-05 aacagccacc gctgcagc agcatcagca chrX:6917748-6917868 72 5.81e-05 aacagcagca gcagctgc aacagcaaca chr3R:26085744-26085864 56 7.66e-05 agccgccgca gcagcagc aacagcaact chr2L:6888241-6888361 43 7.66e-05 GGCGGCAGCA GCAGCAGC ACTTCTGACT chr3R:30109542-30109662 87 7.66e-05 atcacaacca gcagcagc agcagcaaca chr3L:10870189-10870309 80 7.66e-05 agcaacagca gcagcagc aacagcagca chr3R:15399124-15399244 66 7.66e-05 aactccaaca gcagcagc agTACGGTca chr2L:11255853-11255973 4 7.66e-05 aca gcagcagc aacagcagca chr3R:31660976-31661096 81 7.66e-05 aacatcaaca gcagcagc agcaacagca chr3R:24716815-24716935 75 7.66e-05 tcttgcaatt gcagcagc agcaacagca chr3R:18236771-18236891 70 7.66e-05 TGGTGGagca gcagcagc agcagcagca chr3R:18011470-18011590 75 7.66e-05 agatgcacct gcagcagc aacatcaaca chr3L:16851705-16851825 49 7.66e-05 agcaacgctt gcagcagc agcaaaagca chrX:12708445-12708565 46 7.66e-05 aacaacagca gcagcagc agcggcagca chr3R:22602922-22603042 69 7.66e-05 tgcagcaaca gcagcagc ttcagcagca chr3L:7890105-7890225 83 7.66e-05 agcagcagca gcagcagc agcaacaaca chr3L:12329688-12329808 36 7.66e-05 agcaacatca gcagcagc agcaACACCC chr2L:11236503-11236623 42 7.66e-05 cacaacaaca gcagcagc aacaacataa chr3R:28237936-28238056 9 7.66e-05 caccaact gcagcagc agcattcaca chr3R:21445466-21445586 56 7.66e-05 CAGGAGCATG GCAGCAGC AGCGGCCGGG chr3R:29767353-29767473 84 7.66e-05 agcagcagca gcagcagc aattcctggc chr3R:6801292-6801412 27 7.66e-05 agcagcagtc gcagcagc agcagacgca chr3L:21436212-21436332 63 7.66e-05 accatcaaca gcagcagc atcagcacca chr3L:21230901-21231021 52 7.66e-05 tgcaacaccc gcagcagc agcaatcttt chr3L:4729944-4730064 46 7.66e-05 tacggcagca gcagcagc agcaacatca chr3L:3150589-3150709 57 7.66e-05 agcagcagtt gcagcagc aacaacaaca chr3L:9471411-9471531 112 7.66e-05 aacaacaaca gcagcagc a chr2L:13498064-13498184 1 7.66e-05 . gcagcagc agATTGCCAA chrX:9694792-9694912 79 7.66e-05 agcaacagca gcagcagc aacaacaaca chr3R:27533364-27533484 26 7.66e-05 ATGATGCGCA GCAGCAGC AGCTCAAGAA chr2L:17402632-17402752 52 7.66e-05 agcagcagca gcagcagc atgcaacaga chr3L:11604339-11604459 73 7.66e-05 aagcgacacc gcagcagc aacagcagac chr2L:9994539-9994659 50 7.66e-05 aacagcagca gcagcagc aACAGATGAT chr3R:31370334-31370454 75 7.66e-05 agcagcaaca gcagcagc aacagcagca chr3R:29695883-29696003 55 7.66e-05 CGCACCACca gcagcagc aacagcagca chr2L:17973138-17973258 63 7.66e-05 aacatcatct gcagcagc aacagcaCTG chr3L:10585077-10585197 61 7.66e-05 aggcggtcca gcagcagc agcaacatca chr2R:14040277-14040397 55 7.66e-05 aacaacagca gcagcagc agcCCAAAAT chr2R:19159838-19159958 107 7.66e-05 cgccggcacc gcagcagc agccac chr3R:12301667-12301787 91 7.66e-05 aacagcaact gcagcagc aacagccgcg chr2R:14508769-14508889 102 7.66e-05 aacatcagca gcagcagc agcaacaact chrX:6716309-6716429 7 7.66e-05 gcaaca gcagcagc agcatcaaca chr3L:15605103-15605223 50 7.66e-05 aacagcatca gcagcagc agcagcagga chr3L:2442469-2442589 108 7.66e-05 agcagcaaca gcagcagc agcaa chr3R:30360828-30360948 51 7.66e-05 agcagcagca gcagcagc aacatcagcC chr3L:4590190-4590310 54 7.66e-05 aacagccgca gcagcagc agcagcagta chr2R:11810733-11810853 33 7.66e-05 atctacaata gcagcagc agcagcggca chrX:7662564-7662684 98 7.66e-05 accatcagca gcagcagc accaccaaca chr3R:19524625-19524745 80 7.66e-05 tgcagcatca gcagcagc aacagcaaca chr3L:9708951-9709071 73 7.66e-05 agcaacatca gcagcagc agcaacacca chr3R:19040824-19040944 49 7.66e-05 agcagcaaca gcagcagc aacaacatca chr3L:21549993-21550113 52 9.48e-05 gccacttgtt gttgctgc aagatctgtt chr3R:28775842-28775962 1 9.48e-05 . gttgctgc tgtctgAGCC chr2R:11645676-11645796 67 9.48e-05 gttgtctgct gttgctgc cgctgctgtg chr3L:16141695-16141815 76 9.48e-05 gttgttgctt gttgctgc tactgctgct chr2R:14680332-14680452 65 1.12e-04 GGGGTTTGAT GTTGCAGC AGAGGTATGA chr2R:18763039-18763159 80 1.34e-04 GTCTTTGCAT GCCGCTGC GCTTCCGGTC chrX:4358654-4358774 112 1.34e-04 GGCCGAAGCC GCCGCTGC C chr3L:19844646-19844766 111 1.55e-04 gcggAATGGT GCCGCAGC AG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:14027717-14027837 2e-05 54_[+1]_58 chr2L:7866048-7866168 2e-05 55_[+1]_57 chr3L:14024842-14024962 2e-05 95_[+1]_17 chr3L:8369930-8370050 2e-05 59_[+1]_53 chrX:7689031-7689151 2e-05 84_[+1]_28 chr2L:20953203-20953323 2e-05 71_[+1]_41 chrX:6693639-6693759 2e-05 100_[+1]_12 chrX:3472614-3472734 2e-05 67_[+1]_45 chr3R:16827730-16827850 2e-05 18_[+1]_94 chr3R:20820181-20820301 2e-05 67_[+1]_45 chr2R:24333540-24333660 2e-05 85_[+1]_27 chr3R:8167213-8167333 2e-05 76_[+1]_36 chr3L:2789555-2789675 2e-05 61_[+1]_51 chr3R:13873523-13873643 2e-05 7_[+1]_105 chr3L:7764888-7765008 2e-05 91_[+1]_21 chr3L:11524468-11524588 2e-05 34_[+1]_78 chr2R:17075625-17075745 2e-05 48_[+1]_64 chrX:7714031-7714151 2e-05 43_[+1]_69 chr2R:21221402-21221522 2e-05 49_[+1]_63 chr2R:10233930-10234050 2e-05 86_[+1]_26 chr3L:14125755-14125875 2e-05 67_[+1]_45 chrX:7686210-7686330 2e-05 48_[+1]_64 chr2L:20690219-20690339 2e-05 23_[+1]_89 chr2L:241554-241674 2e-05 14_[+1]_98 chrX:17940816-17940936 2e-05 83_[+1]_29 chr3R:19725723-19725843 2e-05 38_[+1]_74 chr3R:9232499-9232619 2e-05 67_[+1]_45 chr3R:7275112-7275232 2e-05 50_[+1]_62 chrX:12715083-12715203 2e-05 19_[+1]_93 chr3R:14965424-14965544 2e-05 57_[+1]_55 chr2L:16808891-16809011 2e-05 86_[+1]_26 chr2R:10990095-10990215 2e-05 33_[+1]_79 chrX:21333274-21333394 2e-05 53_[+1]_59 chr3L:14025848-14025968 2e-05 99_[+1]_13 chr2L:3605812-3605932 2e-05 53_[+1]_59 chr3L:7161449-7161569 2e-05 62_[+1]_50 chr2R:7740521-7740641 2e-05 84_[+1]_28 chrX:10607768-10607888 2e-05 31_[+1]_81 chr2L:5320206-5320326 2e-05 56_[+1]_56 chr3L:11542576-11542696 2e-05 5_[+1]_107 chr2L:18546565-18546685 2e-05 58_[+1]_54 chrX:10618630-10618750 2e-05 91_[+1]_21 chr3L:13430310-13430430 2e-05 77_[+1]_35 chr2R:9772203-9772323 2e-05 69_[+1]_43 chr3L:9840849-9840969 2e-05 68_[+1]_44 chr2L:17437733-17437853 2e-05 14_[+1]_98 chr2R:20958667-20958787 2e-05 58_[+1]_54 chr3R:5877506-5877626 2e-05 76_[+1]_36 chr3L:21718372-21718492 2e-05 25_[+1]_87 chrX:5080660-5080780 2e-05 39_[+1]_73 chr3R:17905279-17905399 2e-05 54_[+1]_58 chr3R:23920526-23920646 2e-05 15_[+1]_97 chr2L:7025422-7025542 2e-05 103_[+1]_9 chr3L:6750977-6751097 2e-05 12_[+1]_100 chr3L:17077412-17077532 2e-05 74_[+1]_38 chr3L:17663786-17663906 2e-05 46_[+1]_66 chrX:12831462-12831582 2e-05 64_[+1]_48 chr2R:18281210-18281330 2e-05 73_[+1]_39 chr2R:13396574-13396694 2e-05 82_[+1]_30 chr3R:30878263-30878383 2e-05 77_[+1]_35 chr3L:2871319-2871439 2e-05 78_[+1]_34 chr2L:5321143-5321263 2e-05 52_[+1]_60 chr3R:5176083-5176203 2e-05 10_[+1]_102 chr3R:18422611-18422731 2e-05 49_[+1]_63 chr3L:8437753-8437873 2e-05 53_[+1]_59 chr3R:11375281-11375401 3.9e-05 108_[+1]_4 chr2R:11208466-11208586 3.9e-05 56_[+1]_56 chr3L:6947711-6947831 3.9e-05 30_[+1]_82 chr2R:10612127-10612247 3.9e-05 91_[+1]_21 chr2R:18746006-18746126 3.9e-05 17_[+1]_95 chr3R:20011081-20011201 3.9e-05 56_[+1]_56 chr3L:888511-888631 3.9e-05 68_[+1]_44 chrX:6917748-6917868 5.8e-05 71_[+1]_41 chr3R:26085744-26085864 7.7e-05 55_[+1]_57 chr2L:6888241-6888361 7.7e-05 42_[+1]_70 chr3R:30109542-30109662 7.7e-05 86_[+1]_26 chr3L:10870189-10870309 7.7e-05 79_[+1]_33 chr3R:15399124-15399244 7.7e-05 65_[+1]_47 chr2L:11255853-11255973 7.7e-05 3_[+1]_109 chr3R:31660976-31661096 7.7e-05 80_[+1]_32 chr3R:24716815-24716935 7.7e-05 74_[+1]_38 chr3R:18236771-18236891 7.7e-05 69_[+1]_43 chr3R:18011470-18011590 7.7e-05 74_[+1]_38 chr3L:16851705-16851825 7.7e-05 48_[+1]_64 chrX:12708445-12708565 7.7e-05 45_[+1]_67 chr3R:22602922-22603042 7.7e-05 68_[+1]_44 chr3L:7890105-7890225 7.7e-05 82_[+1]_30 chr3L:12329688-12329808 7.7e-05 35_[+1]_77 chr2L:11236503-11236623 7.7e-05 41_[+1]_71 chr3R:28237936-28238056 7.7e-05 8_[+1]_104 chr3R:21445466-21445586 7.7e-05 55_[+1]_57 chr3R:29767353-29767473 7.7e-05 83_[+1]_29 chr3R:6801292-6801412 7.7e-05 26_[+1]_86 chr3L:21436212-21436332 7.7e-05 62_[+1]_50 chr3L:21230901-21231021 7.7e-05 51_[+1]_61 chr3L:4729944-4730064 7.7e-05 45_[+1]_67 chr3L:3150589-3150709 7.7e-05 56_[+1]_56 chr3L:9471411-9471531 7.7e-05 111_[+1]_1 chr2L:13498064-13498184 7.7e-05 [+1]_112 chrX:9694792-9694912 7.7e-05 78_[+1]_34 chr3R:27533364-27533484 7.7e-05 25_[+1]_87 chr2L:17402632-17402752 7.7e-05 51_[+1]_61 chr3L:11604339-11604459 7.7e-05 72_[+1]_40 chr2L:9994539-9994659 7.7e-05 49_[+1]_63 chr3R:31370334-31370454 7.7e-05 74_[+1]_38 chr3R:29695883-29696003 7.7e-05 54_[+1]_58 chr2L:17973138-17973258 7.7e-05 62_[+1]_50 chr3L:10585077-10585197 7.7e-05 60_[+1]_52 chr2R:14040277-14040397 7.7e-05 54_[+1]_58 chr2R:19159838-19159958 7.7e-05 106_[+1]_6 chr3R:12301667-12301787 7.7e-05 90_[+1]_22 chr2R:14508769-14508889 7.7e-05 101_[+1]_11 chrX:6716309-6716429 7.7e-05 6_[+1]_106 chr3L:15605103-15605223 7.7e-05 49_[+1]_63 chr3L:2442469-2442589 7.7e-05 107_[+1]_5 chr3R:30360828-30360948 7.7e-05 50_[+1]_62 chr3L:4590190-4590310 7.7e-05 53_[+1]_59 chr2R:11810733-11810853 7.7e-05 32_[+1]_80 chrX:7662564-7662684 7.7e-05 97_[+1]_15 chr3R:19524625-19524745 7.7e-05 79_[+1]_33 chr3L:9708951-9709071 7.7e-05 72_[+1]_40 chr3R:19040824-19040944 7.7e-05 48_[+1]_64 chr3L:21549993-21550113 9.5e-05 51_[+1]_61 chr3R:28775842-28775962 9.5e-05 [+1]_112 chr2R:11645676-11645796 9.5e-05 66_[+1]_46 chr3L:16141695-16141815 9.5e-05 75_[+1]_37 chr2R:14680332-14680452 0.00011 64_[+1]_48 chr2R:18763039-18763159 0.00013 79_[+1]_33 chrX:4358654-4358774 0.00013 111_[+1]_1 chr3L:19844646-19844766 0.00015 110_[+1]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCWGCWGC width=8 seqs=130 chr3L:14027717-14027837 ( 55) GCTGCTGC 1 chr2L:7866048-7866168 ( 56) GCTGCTGC 1 chr3L:14024842-14024962 ( 96) GCTGCTGC 1 chr3L:8369930-8370050 ( 60) GCTGCTGC 1 chrX:7689031-7689151 ( 85) GCTGCTGC 1 chr2L:20953203-20953323 ( 72) GCTGCTGC 1 chrX:6693639-6693759 ( 101) GCTGCTGC 1 chrX:3472614-3472734 ( 68) GCTGCTGC 1 chr3R:16827730-16827850 ( 19) GCTGCTGC 1 chr3R:20820181-20820301 ( 68) GCTGCTGC 1 chr2R:24333540-24333660 ( 86) GCTGCTGC 1 chr3R:8167213-8167333 ( 77) GCTGCTGC 1 chr3L:2789555-2789675 ( 62) GCTGCTGC 1 chr3R:13873523-13873643 ( 8) GCTGCTGC 1 chr3L:7764888-7765008 ( 92) GCTGCTGC 1 chr3L:11524468-11524588 ( 35) GCTGCTGC 1 chr2R:17075625-17075745 ( 49) GCTGCTGC 1 chrX:7714031-7714151 ( 44) GCTGCTGC 1 chr2R:21221402-21221522 ( 50) GCTGCTGC 1 chr2R:10233930-10234050 ( 87) GCTGCTGC 1 chr3L:14125755-14125875 ( 68) GCTGCTGC 1 chrX:7686210-7686330 ( 49) GCTGCTGC 1 chr2L:20690219-20690339 ( 24) GCTGCTGC 1 chr2L:241554-241674 ( 15) GCTGCTGC 1 chrX:17940816-17940936 ( 84) GCTGCTGC 1 chr3R:19725723-19725843 ( 39) GCTGCTGC 1 chr3R:9232499-9232619 ( 68) GCTGCTGC 1 chr3R:7275112-7275232 ( 51) GCTGCTGC 1 chrX:12715083-12715203 ( 20) GCTGCTGC 1 chr3R:14965424-14965544 ( 58) GCTGCTGC 1 chr2L:16808891-16809011 ( 87) GCTGCTGC 1 chr2R:10990095-10990215 ( 34) GCTGCTGC 1 chrX:21333274-21333394 ( 54) GCTGCTGC 1 chr3L:14025848-14025968 ( 100) GCTGCTGC 1 chr2L:3605812-3605932 ( 54) GCTGCTGC 1 chr3L:7161449-7161569 ( 63) GCTGCTGC 1 chr2R:7740521-7740641 ( 85) GCTGCTGC 1 chrX:10607768-10607888 ( 32) GCTGCTGC 1 chr2L:5320206-5320326 ( 57) GCTGCTGC 1 chr3L:11542576-11542696 ( 6) GCTGCTGC 1 chr2L:18546565-18546685 ( 59) GCTGCTGC 1 chrX:10618630-10618750 ( 92) GCTGCTGC 1 chr3L:13430310-13430430 ( 78) GCTGCTGC 1 chr2R:9772203-9772323 ( 70) GCTGCTGC 1 chr3L:9840849-9840969 ( 69) GCTGCTGC 1 chr2L:17437733-17437853 ( 15) GCTGCTGC 1 chr2R:20958667-20958787 ( 59) GCTGCTGC 1 chr3R:5877506-5877626 ( 77) GCTGCTGC 1 chr3L:21718372-21718492 ( 26) GCTGCTGC 1 chrX:5080660-5080780 ( 40) GCTGCTGC 1 chr3R:17905279-17905399 ( 55) GCTGCTGC 1 chr3R:23920526-23920646 ( 16) GCTGCTGC 1 chr2L:7025422-7025542 ( 104) GCTGCTGC 1 chr3L:6750977-6751097 ( 13) GCTGCTGC 1 chr3L:17077412-17077532 ( 75) GCTGCTGC 1 chr3L:17663786-17663906 ( 47) GCTGCTGC 1 chrX:12831462-12831582 ( 65) GCTGCTGC 1 chr2R:18281210-18281330 ( 74) GCTGCTGC 1 chr2R:13396574-13396694 ( 83) GCTGCTGC 1 chr3R:30878263-30878383 ( 78) GCTGCTGC 1 chr3L:2871319-2871439 ( 79) GCTGCTGC 1 chr2L:5321143-5321263 ( 53) GCTGCTGC 1 chr3R:5176083-5176203 ( 11) GCTGCTGC 1 chr3R:18422611-18422731 ( 50) GCTGCTGC 1 chr3L:8437753-8437873 ( 54) GCTGCTGC 1 chr3R:11375281-11375401 ( 109) GCTGCAGC 1 chr2R:11208466-11208586 ( 57) GCTGCAGC 1 chr3L:6947711-6947831 ( 31) GCTGCAGC 1 chr2R:10612127-10612247 ( 92) GCTGCAGC 1 chr2R:18746006-18746126 ( 18) GCTGCAGC 1 chr3R:20011081-20011201 ( 57) GCTGCAGC 1 chr3L:888511-888631 ( 69) GCTGCAGC 1 chrX:6917748-6917868 ( 72) GCAGCTGC 1 chr3R:26085744-26085864 ( 56) GCAGCAGC 1 chr2L:6888241-6888361 ( 43) GCAGCAGC 1 chr3R:30109542-30109662 ( 87) GCAGCAGC 1 chr3L:10870189-10870309 ( 80) GCAGCAGC 1 chr3R:15399124-15399244 ( 66) GCAGCAGC 1 chr2L:11255853-11255973 ( 4) GCAGCAGC 1 chr3R:31660976-31661096 ( 81) GCAGCAGC 1 chr3R:24716815-24716935 ( 75) GCAGCAGC 1 chr3R:18236771-18236891 ( 70) GCAGCAGC 1 chr3R:18011470-18011590 ( 75) GCAGCAGC 1 chr3L:16851705-16851825 ( 49) GCAGCAGC 1 chrX:12708445-12708565 ( 46) GCAGCAGC 1 chr3R:22602922-22603042 ( 69) GCAGCAGC 1 chr3L:7890105-7890225 ( 83) GCAGCAGC 1 chr3L:12329688-12329808 ( 36) GCAGCAGC 1 chr2L:11236503-11236623 ( 42) GCAGCAGC 1 chr3R:28237936-28238056 ( 9) GCAGCAGC 1 chr3R:21445466-21445586 ( 56) GCAGCAGC 1 chr3R:29767353-29767473 ( 84) GCAGCAGC 1 chr3R:6801292-6801412 ( 27) GCAGCAGC 1 chr3L:21436212-21436332 ( 63) GCAGCAGC 1 chr3L:21230901-21231021 ( 52) GCAGCAGC 1 chr3L:4729944-4730064 ( 46) GCAGCAGC 1 chr3L:3150589-3150709 ( 57) GCAGCAGC 1 chr3L:9471411-9471531 ( 112) GCAGCAGC 1 chr2L:13498064-13498184 ( 1) GCAGCAGC 1 chrX:9694792-9694912 ( 79) GCAGCAGC 1 chr3R:27533364-27533484 ( 26) GCAGCAGC 1 chr2L:17402632-17402752 ( 52) GCAGCAGC 1 chr3L:11604339-11604459 ( 73) GCAGCAGC 1 chr2L:9994539-9994659 ( 50) GCAGCAGC 1 chr3R:31370334-31370454 ( 75) GCAGCAGC 1 chr3R:29695883-29696003 ( 55) GCAGCAGC 1 chr2L:17973138-17973258 ( 63) GCAGCAGC 1 chr3L:10585077-10585197 ( 61) GCAGCAGC 1 chr2R:14040277-14040397 ( 55) GCAGCAGC 1 chr2R:19159838-19159958 ( 107) GCAGCAGC 1 chr3R:12301667-12301787 ( 91) GCAGCAGC 1 chr2R:14508769-14508889 ( 102) GCAGCAGC 1 chrX:6716309-6716429 ( 7) GCAGCAGC 1 chr3L:15605103-15605223 ( 50) GCAGCAGC 1 chr3L:2442469-2442589 ( 108) GCAGCAGC 1 chr3R:30360828-30360948 ( 51) GCAGCAGC 1 chr3L:4590190-4590310 ( 54) GCAGCAGC 1 chr2R:11810733-11810853 ( 33) GCAGCAGC 1 chrX:7662564-7662684 ( 98) GCAGCAGC 1 chr3R:19524625-19524745 ( 80) GCAGCAGC 1 chr3L:9708951-9709071 ( 73) GCAGCAGC 1 chr3R:19040824-19040944 ( 49) GCAGCAGC 1 chr3L:21549993-21550113 ( 52) GTTGCTGC 1 chr3R:28775842-28775962 ( 1) GTTGCTGC 1 chr2R:11645676-11645796 ( 67) GTTGCTGC 1 chr3L:16141695-16141815 ( 76) GTTGCTGC 1 chr2R:14680332-14680452 ( 65) GTTGCAGC 1 chr2R:18763039-18763159 ( 80) GCCGCTGC 1 chrX:4358654-4358774 ( 112) GCCGCTGC 1 chr3L:19844646-19844766 ( 111) GCCGCAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.91657 E= 2.3e-159 -1367 -1367 188 -1367 -1367 188 -1367 -263 74 -350 -1367 131 -1367 -1367 188 -1367 -1367 194 -1367 -1367 96 -1367 -1367 122 -1367 -1367 188 -1367 -1367 194 -1367 -1367 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 130 E= 2.3e-159 0.000000 0.000000 1.000000 0.000000 0.000000 0.961538 0.000000 0.038462 0.384615 0.023077 0.000000 0.592308 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.446154 0.000000 0.000000 0.553846 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-1 regular expression -------------------------------------------------------------------------------- GC[TA]GC[TA]GC -------------------------------------------------------------------------------- Time 7.41 secs. ******************************************************************************** ******************************************************************************** MOTIF GCWGCWGC MEME-2 width = 8 sites = 119 llr = 1024 E-value = 4.0e-105 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::4::51: pos.-specific C :9::a::a probability G a::a::9: matrix T :16::5:: bits 2.1 1.9 ** 1.7 * ** * 1.5 ** ** ** Relative 1.3 ** ** ** Entropy 1.1 ******** (12.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCTGCTGC consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:14027717-14027837 64 1.98e-05 tgctgctgct gctgctgc tgctgttgtt chr2L:7866048-7866168 47 1.98e-05 GGGTGTtgct gctgctgc tgctgctgct chr3L:8369930-8370050 15 1.98e-05 CACCGATATt gctgctgc agttgctgct chrX:7689031-7689151 97 1.98e-05 tgctgctgct gctgctgc tgttgcggcg chr3R:16827730-16827850 37 1.98e-05 tgcttggact gctgctgc tattgttggt chr3R:20820181-20820301 80 1.98e-05 tgctgctgct gctgctgc tTCTCGGCGG chr2R:24333540-24333660 47 1.98e-05 tgctgttgtt gctgctgc tgttgctgct chr3R:8167213-8167333 7 1.98e-05 AGGGAA GCTGCTGC GGCGGAGGAC chr3L:2789555-2789675 29 1.98e-05 tgctgctgct gctgctgc tgttgctgtt chrX:7714031-7714151 56 1.98e-05 tgctgctgtt gctgctgc agctgcAAGA chr2R:21221402-21221522 99 1.98e-05 tgcagttgct gctgctgc tgctgctgtt chr2R:10233930-10234050 51 1.98e-05 GTATCctgct gctgctgc tgttgttgct chrX:7686210-7686330 20 1.98e-05 agaccgcttg gctgctgc caaattgctg chr2L:20690219-20690339 39 1.98e-05 tgctgctgtt gctgctgc tgttgcGGCA chr2L:241554-241674 93 1.98e-05 gtgggcggtt gctgctgc tgttgctgct chrX:17940816-17940936 57 1.98e-05 gtctgttgct gctgctgc ttgaagccgt chr3R:9232499-9232619 6 1.98e-05 ctgtt gctgctgc tgctggggat chr3R:7275112-7275232 15 1.98e-05 ggaggaggtt gctgctgc ggatggtggt chrX:12715083-12715203 29 1.98e-05 tgctgctgct gctgctgc tgctgTTGGT chr2L:16808891-16809011 105 1.98e-05 tgctgctgct gctgctgc tgctgGCA chr2R:10990095-10990215 88 1.98e-05 tgctgctact gctgctgc tgctCTTGGG chrX:21333274-21333394 72 1.98e-05 tgctgctggt gctgctgc agctgttgct chr2L:3605812-3605932 81 1.98e-05 cacaggcggt gctgctgc tgctgttgct chr3L:7161449-7161569 90 1.98e-05 tggtggtgtt gctgctgc tgctgctggt chr2R:7740521-7740641 49 1.98e-05 tgctgctgtt gctgctgc gctgGGTCAA chrX:10607768-10607888 113 1.98e-05 tgggcgtgtt gctgctgc chr2L:5320206-5320326 72 1.98e-05 tgctgttgtt gctgctgc tgttgctgct chr3L:11542576-11542696 15 1.98e-05 tgctgctgct gctgctgc tgttgttgtt chr2L:18546565-18546685 20 1.98e-05 CTTGGTGTtt gctgctgc tgttgttgat chr2R:9772203-9772323 7 1.98e-05 gcagtt gctgctgc tgctgctgca chr3L:9840849-9840969 102 1.98e-05 tgctgatgtt gctgctgc tggtgatgct chr2R:20958667-20958787 23 1.98e-05 tgttgctgct gctgctgc tgctgcgaat chrX:5080660-5080780 113 1.98e-05 tgatggtgtt gctgctgc chr3R:17905279-17905399 91 1.98e-05 gagtgttgtt gctgctgc tgctgctgct chr3R:23920526-23920646 97 1.98e-05 tgatgatgtt gctgctgc agaggcaaca chr3L:6750977-6751097 97 1.98e-05 tgttgttggt gctgctgc tgcggttgtt chr3L:17077412-17077532 54 1.98e-05 tgctgttgct gctgctgc tgttgttgtt chr3L:17663786-17663906 80 1.98e-05 tgctgttgca gctgctgc atttggagct chrX:12831462-12831582 43 1.98e-05 TTTCCTCGTC gctgctgc tggttgttgt chr2R:18281210-18281330 50 1.98e-05 tgttgttgct gctgctgc tgttgctggg chr2R:13396574-13396694 98 1.98e-05 tgcggtggtt gctgctgc atatgctgtt chr3R:30878263-30878383 60 1.98e-05 GCCACGTGTt gctgctgc tgctgttggt chr3L:2871319-2871439 43 1.98e-05 tgttgatgtt gctgctgc tgcCTGGCAT chr2L:5321143-5321263 110 1.98e-05 atctgttgct gctgctgc tgt chr3R:5176083-5176203 92 1.98e-05 tgcatatgtt gctgctgc tgctgctgct chr3R:18422611-18422731 89 1.98e-05 tgcagcatgt gctgctgc GCAAGGGCAT chr3L:8437753-8437873 111 1.98e-05 tgctgatgtt gctgctgc tg chr3L:6947711-6947831 46 5.81e-05 agcagcaaca gcagctgc aactcaatca chr2R:18746006-18746126 69 5.81e-05 accaacagtt gctgcagc atccccacca chr3R:26085744-26085864 38 7.66e-05 aacagcaaca gcagcagc agccgccgca chr3R:30109542-30109662 108 7.66e-05 agcaacaaca gcagcagc atcat chr3L:10870189-10870309 26 7.66e-05 aacagtacca gcagcagc atcagcgcga chr3R:15399124-15399244 48 7.66e-05 agcagcagca gcagcagc aactccaaca chrX:6917748-6917868 42 7.66e-05 agtttcagca gcagcagc agcaacagca chr3R:31660976-31661096 48 7.66e-05 agcaacagca gcagcagc accagcagca chr3R:13873523-13873643 43 7.66e-05 atgAGCCAGT GCAGCAGC CATTTGGAAC chr3R:24716815-24716935 33 7.66e-05 agcaacactt gcagcagc aacaccagca chr3R:18236771-18236891 79 7.66e-05 agcagcagca gcagcagc atcatcatca chr3R:18011470-18011590 12 7.66e-05 CGTCGGCAca gcagcagc agcagcagca chr3L:16851705-16851825 16 7.66e-05 agcaacgtct gcagcagc aacatcaaaa chrX:12708445-12708565 70 7.66e-05 agcagcggca gcagcagc aACCACGCGA chr3R:22602922-22603042 36 7.66e-05 aacagcagca gcagcagc ttcaccagca chr3L:7890105-7890225 74 7.66e-05 aacaacaaca gcagcagc agcagcagca chr3L:12329688-12329808 21 7.66e-05 agcagcacca gcagcagc aacatcagca chr2L:11236503-11236623 24 7.66e-05 aacaaccaca gcagcagc cacaacaaca chr3R:28237936-28238056 87 7.66e-05 cgcactgggt gcagcagc aacagcaaca chr3R:29767353-29767473 75 7.66e-05 agtgcaacca gcagcagc agcagcagca chr3R:6801292-6801412 12 7.66e-05 agcaagcgca gcagcagc agcagtcgca chr3L:21436212-21436332 33 7.66e-05 accaccatca gcagcagc aacaccagca chr3R:11375281-11375401 46 7.66e-05 agcaacaaga gcagcagc gacgcaagga chr3L:21230901-21231021 84 7.66e-05 ctagcagaca gcagcagc agcaacggca chr3L:4729944-4730064 22 7.66e-05 GAGTGGAAAT gcagcagc aacatctacg chr3L:3150589-3150709 78 7.66e-05 aacaacaggc gcagcagc agcaacaaca chrX:9694792-9694912 106 7.66e-05 agcagcaaca gcagcagc aacagca chr2L:17402632-17402752 81 7.66e-05 agcccctgca gcagcagc aacagccgca chr3L:11604339-11604459 22 7.66e-05 agcagcagca gcagcagc aacagcaACA chr2R:11208466-11208586 75 7.66e-05 aattgcattg gcagcagc aacagaggca chr2L:9994539-9994659 26 7.66e-05 aacaacagca gcagcagc agcaacaaca chr3R:31370334-31370454 63 7.66e-05 aacagcagca gcagcagc aacagcagca chr3R:29695883-29696003 73 7.66e-05 aacagcagca gcagcagc agcagaacca chr2L:17973138-17973258 45 7.66e-05 agcagcagca gcagcagc aacatcatct chr3L:10585077-10585197 19 7.66e-05 agcagcagca gcagcagc aacaacaggc chr2R:14040277-14040397 19 7.66e-05 ccatgcaaca gcagcagc agcagcaaca chr3R:20011081-20011201 30 7.66e-05 agcaaatgat gcagcagc aaggcaagtc chr3R:30360828-30360948 42 7.66e-05 aacaacaaca gcagcagc agcagcagca chr3L:4590190-4590310 78 7.66e-05 agtaccaacc gcagcagc aacaacagca chr2R:11810733-11810853 105 7.66e-05 agctttagcg gcagcagc acaacagc chr3R:19524625-19524745 98 7.66e-05 aacagcaaca gcagcagc atcagccaac chr3L:9708951-9709071 43 7.66e-05 aacaacaaca gcagcagc aacatcaaca chr3R:19040824-19040944 37 7.66e-05 aacagcaaca gcagcagc aacagcagca chrX:6693639-6693759 65 9.48e-05 tggtgaagat gttgctgc tggaactgtt chr3L:7764888-7765008 50 9.48e-05 TGGCTCTGAT GTTGCTGC TGGAGATTGT chr2R:17075625-17075745 111 9.48e-05 gttgacagct gttgctgc tg chr3L:21549993-21550113 10 9.48e-05 gggccagtt gttgctgc attatctgtt chr3L:14125755-14125875 33 9.48e-05 TGGGGGATCC GTTGCTGC TGTTGCTACT chr2R:11645676-11645796 22 9.48e-05 gagggcttat gttgctgc tgttgctgtt chr3L:16141695-16141815 108 9.48e-05 TGGAGATGGT GTTGCTGC TGATG chrX:10618630-10618750 80 9.48e-05 atttgttgtt gttgctgc cggcgctgct chr3L:13430310-13430430 99 9.48e-05 tgctgctgat gttgctgc tgttggtgct chr2L:17437733-17437853 96 9.48e-05 tgctgttgct gttgctgc tgTGGATGGT chr3R:5877506-5877626 55 9.48e-05 ggttattgat gttgctgc atgcagctga chr2L:7025422-7025542 113 9.48e-05 tgctgctgct gttgctgc chr3L:5327960-5328080 4 1.64e-04 AAT GCTGCTAC CCTCgtatgt chr3L:888511-888631 54 1.96e-04 TGGCACCTca gctgcaac agccaccgct chr3L:9471411-9471531 88 2.12e-04 aacatcaaca gcagcaac aacagcaaca chr2R:7910419-7910539 5 2.12e-04 AAAG GCAGCAAC TAATTAGACA chr2R:10612127-10612247 50 2.12e-04 atcaacaaca gcagcaac atcttcatgc chr3R:12301667-12301787 108 2.12e-04 caacagccgc gcagcaac aacag chrX:6716309-6716429 67 2.12e-04 tgcaacgaca gcagcaac agcaaatgga chr3L:15605103-15605223 68 2.12e-04 agcagcagga gcagcaac agcaACACAT chr3L:2442469-2442589 81 2.12e-04 agcaacatca gcagcaac aacaccatca chr2L:11255853-11255973 13 2.77e-04 agcagcagca acagcagc acaatagcaa chr2L:13498064-13498184 74 2.77e-04 CCCAACATCA ACAGCAGC CACATCGAGG chr3R:27533364-27533484 67 2.77e-04 AATTTCGTTG ACAGCAGC GAAACGGATG chrX:7662564-7662684 113 2.77e-04 agcaccacca acagcagc chr2R:18763039-18763159 42 2.95e-04 CTCATTTTCA GCTGCTGT TTCGTCATGG chrX:3472614-3472734 59 2.95e-04 cgctgtgtcc gctgctgt tgctgctgct chr3L:14025848-14025968 85 2.95e-04 GAAGGGGTGt gctgctgt tgtggttgct chr2L:8659688-8659808 5 3.92e-04 AAAT GTTGCAAC AACGCGGGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:14027717-14027837 2e-05 63_[+2]_49 chr2L:7866048-7866168 2e-05 46_[+2]_66 chr3L:8369930-8370050 2e-05 14_[+2]_98 chrX:7689031-7689151 2e-05 96_[+2]_16 chr3R:16827730-16827850 2e-05 36_[+2]_76 chr3R:20820181-20820301 2e-05 79_[+2]_33 chr2R:24333540-24333660 2e-05 46_[+2]_66 chr3R:8167213-8167333 2e-05 6_[+2]_106 chr3L:2789555-2789675 2e-05 28_[+2]_84 chrX:7714031-7714151 2e-05 55_[+2]_57 chr2R:21221402-21221522 2e-05 98_[+2]_14 chr2R:10233930-10234050 2e-05 50_[+2]_62 chrX:7686210-7686330 2e-05 19_[+2]_93 chr2L:20690219-20690339 2e-05 38_[+2]_74 chr2L:241554-241674 2e-05 92_[+2]_20 chrX:17940816-17940936 2e-05 56_[+2]_56 chr3R:9232499-9232619 2e-05 5_[+2]_107 chr3R:7275112-7275232 2e-05 14_[+2]_98 chrX:12715083-12715203 2e-05 28_[+2]_84 chr2L:16808891-16809011 2e-05 104_[+2]_8 chr2R:10990095-10990215 2e-05 87_[+2]_25 chrX:21333274-21333394 2e-05 71_[+2]_41 chr2L:3605812-3605932 2e-05 80_[+2]_32 chr3L:7161449-7161569 2e-05 89_[+2]_23 chr2R:7740521-7740641 2e-05 48_[+2]_64 chrX:10607768-10607888 2e-05 112_[+2] chr2L:5320206-5320326 2e-05 71_[+2]_41 chr3L:11542576-11542696 2e-05 14_[+2]_98 chr2L:18546565-18546685 2e-05 19_[+2]_93 chr2R:9772203-9772323 2e-05 6_[+2]_106 chr3L:9840849-9840969 2e-05 101_[+2]_11 chr2R:20958667-20958787 2e-05 22_[+2]_90 chrX:5080660-5080780 2e-05 112_[+2] chr3R:17905279-17905399 2e-05 90_[+2]_22 chr3R:23920526-23920646 2e-05 96_[+2]_16 chr3L:6750977-6751097 2e-05 96_[+2]_16 chr3L:17077412-17077532 2e-05 53_[+2]_59 chr3L:17663786-17663906 2e-05 79_[+2]_33 chrX:12831462-12831582 2e-05 42_[+2]_70 chr2R:18281210-18281330 2e-05 49_[+2]_63 chr2R:13396574-13396694 2e-05 97_[+2]_15 chr3R:30878263-30878383 2e-05 59_[+2]_53 chr3L:2871319-2871439 2e-05 42_[+2]_70 chr2L:5321143-5321263 2e-05 109_[+2]_3 chr3R:5176083-5176203 2e-05 91_[+2]_21 chr3R:18422611-18422731 2e-05 88_[+2]_24 chr3L:8437753-8437873 2e-05 110_[+2]_2 chr3L:6947711-6947831 5.8e-05 45_[+2]_67 chr2R:18746006-18746126 5.8e-05 68_[+2]_44 chr3R:26085744-26085864 7.7e-05 37_[+2]_75 chr3R:30109542-30109662 7.7e-05 107_[+2]_5 chr3L:10870189-10870309 7.7e-05 25_[+2]_87 chr3R:15399124-15399244 7.7e-05 47_[+2]_65 chrX:6917748-6917868 7.7e-05 41_[+2]_71 chr3R:31660976-31661096 7.7e-05 47_[+2]_65 chr3R:13873523-13873643 7.7e-05 42_[+2]_70 chr3R:24716815-24716935 7.7e-05 32_[+2]_80 chr3R:18236771-18236891 7.7e-05 78_[+2]_34 chr3R:18011470-18011590 7.7e-05 11_[+2]_101 chr3L:16851705-16851825 7.7e-05 15_[+2]_97 chrX:12708445-12708565 7.7e-05 69_[+2]_43 chr3R:22602922-22603042 7.7e-05 35_[+2]_77 chr3L:7890105-7890225 7.7e-05 73_[+2]_39 chr3L:12329688-12329808 7.7e-05 20_[+2]_92 chr2L:11236503-11236623 7.7e-05 23_[+2]_89 chr3R:28237936-28238056 7.7e-05 86_[+2]_26 chr3R:29767353-29767473 7.7e-05 74_[+2]_38 chr3R:6801292-6801412 7.7e-05 11_[+2]_101 chr3L:21436212-21436332 7.7e-05 32_[+2]_80 chr3R:11375281-11375401 7.7e-05 45_[+2]_67 chr3L:21230901-21231021 7.7e-05 83_[+2]_29 chr3L:4729944-4730064 7.7e-05 21_[+2]_91 chr3L:3150589-3150709 7.7e-05 77_[+2]_35 chrX:9694792-9694912 7.7e-05 105_[+2]_7 chr2L:17402632-17402752 7.7e-05 80_[+2]_32 chr3L:11604339-11604459 7.7e-05 21_[+2]_91 chr2R:11208466-11208586 7.7e-05 74_[+2]_38 chr2L:9994539-9994659 7.7e-05 25_[+2]_87 chr3R:31370334-31370454 7.7e-05 62_[+2]_50 chr3R:29695883-29696003 7.7e-05 72_[+2]_40 chr2L:17973138-17973258 7.7e-05 44_[+2]_68 chr3L:10585077-10585197 7.7e-05 18_[+2]_94 chr2R:14040277-14040397 7.7e-05 18_[+2]_94 chr3R:20011081-20011201 7.7e-05 29_[+2]_83 chr3R:30360828-30360948 7.7e-05 41_[+2]_71 chr3L:4590190-4590310 7.7e-05 77_[+2]_35 chr2R:11810733-11810853 7.7e-05 104_[+2]_8 chr3R:19524625-19524745 7.7e-05 97_[+2]_15 chr3L:9708951-9709071 7.7e-05 42_[+2]_70 chr3R:19040824-19040944 7.7e-05 36_[+2]_76 chrX:6693639-6693759 9.5e-05 64_[+2]_48 chr3L:7764888-7765008 9.5e-05 49_[+2]_63 chr2R:17075625-17075745 9.5e-05 110_[+2]_2 chr3L:21549993-21550113 9.5e-05 9_[+2]_103 chr3L:14125755-14125875 9.5e-05 32_[+2]_80 chr2R:11645676-11645796 9.5e-05 21_[+2]_91 chr3L:16141695-16141815 9.5e-05 107_[+2]_5 chrX:10618630-10618750 9.5e-05 79_[+2]_33 chr3L:13430310-13430430 9.5e-05 98_[+2]_14 chr2L:17437733-17437853 9.5e-05 95_[+2]_17 chr3R:5877506-5877626 9.5e-05 54_[+2]_58 chr2L:7025422-7025542 9.5e-05 112_[+2] chr3L:5327960-5328080 0.00016 3_[+2]_109 chr3L:888511-888631 0.0002 53_[+2]_59 chr3L:9471411-9471531 0.00021 87_[+2]_25 chr2R:7910419-7910539 0.00021 4_[+2]_108 chr2R:10612127-10612247 0.00021 49_[+2]_63 chr3R:12301667-12301787 0.00021 107_[+2]_5 chrX:6716309-6716429 0.00021 66_[+2]_46 chr3L:15605103-15605223 0.00021 67_[+2]_45 chr3L:2442469-2442589 0.00021 80_[+2]_32 chr2L:11255853-11255973 0.00028 12_[+2]_100 chr2L:13498064-13498184 0.00028 73_[+2]_39 chr3R:27533364-27533484 0.00028 66_[+2]_46 chrX:7662564-7662684 0.00028 112_[+2] chr2R:18763039-18763159 0.00029 41_[+2]_71 chrX:3472614-3472734 0.00029 58_[+2]_54 chr3L:14025848-14025968 0.00029 84_[+2]_28 chr2L:8659688-8659808 0.00039 4_[+2]_108 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCWGCWGC width=8 seqs=119 chr3L:14027717-14027837 ( 64) GCTGCTGC 1 chr2L:7866048-7866168 ( 47) GCTGCTGC 1 chr3L:8369930-8370050 ( 15) GCTGCTGC 1 chrX:7689031-7689151 ( 97) GCTGCTGC 1 chr3R:16827730-16827850 ( 37) GCTGCTGC 1 chr3R:20820181-20820301 ( 80) GCTGCTGC 1 chr2R:24333540-24333660 ( 47) GCTGCTGC 1 chr3R:8167213-8167333 ( 7) GCTGCTGC 1 chr3L:2789555-2789675 ( 29) GCTGCTGC 1 chrX:7714031-7714151 ( 56) GCTGCTGC 1 chr2R:21221402-21221522 ( 99) GCTGCTGC 1 chr2R:10233930-10234050 ( 51) GCTGCTGC 1 chrX:7686210-7686330 ( 20) GCTGCTGC 1 chr2L:20690219-20690339 ( 39) GCTGCTGC 1 chr2L:241554-241674 ( 93) GCTGCTGC 1 chrX:17940816-17940936 ( 57) GCTGCTGC 1 chr3R:9232499-9232619 ( 6) GCTGCTGC 1 chr3R:7275112-7275232 ( 15) GCTGCTGC 1 chrX:12715083-12715203 ( 29) GCTGCTGC 1 chr2L:16808891-16809011 ( 105) GCTGCTGC 1 chr2R:10990095-10990215 ( 88) GCTGCTGC 1 chrX:21333274-21333394 ( 72) GCTGCTGC 1 chr2L:3605812-3605932 ( 81) GCTGCTGC 1 chr3L:7161449-7161569 ( 90) GCTGCTGC 1 chr2R:7740521-7740641 ( 49) GCTGCTGC 1 chrX:10607768-10607888 ( 113) GCTGCTGC 1 chr2L:5320206-5320326 ( 72) GCTGCTGC 1 chr3L:11542576-11542696 ( 15) GCTGCTGC 1 chr2L:18546565-18546685 ( 20) GCTGCTGC 1 chr2R:9772203-9772323 ( 7) GCTGCTGC 1 chr3L:9840849-9840969 ( 102) GCTGCTGC 1 chr2R:20958667-20958787 ( 23) GCTGCTGC 1 chrX:5080660-5080780 ( 113) GCTGCTGC 1 chr3R:17905279-17905399 ( 91) GCTGCTGC 1 chr3R:23920526-23920646 ( 97) GCTGCTGC 1 chr3L:6750977-6751097 ( 97) GCTGCTGC 1 chr3L:17077412-17077532 ( 54) GCTGCTGC 1 chr3L:17663786-17663906 ( 80) GCTGCTGC 1 chrX:12831462-12831582 ( 43) GCTGCTGC 1 chr2R:18281210-18281330 ( 50) GCTGCTGC 1 chr2R:13396574-13396694 ( 98) GCTGCTGC 1 chr3R:30878263-30878383 ( 60) GCTGCTGC 1 chr3L:2871319-2871439 ( 43) GCTGCTGC 1 chr2L:5321143-5321263 ( 110) GCTGCTGC 1 chr3R:5176083-5176203 ( 92) GCTGCTGC 1 chr3R:18422611-18422731 ( 89) GCTGCTGC 1 chr3L:8437753-8437873 ( 111) GCTGCTGC 1 chr3L:6947711-6947831 ( 46) GCAGCTGC 1 chr2R:18746006-18746126 ( 69) GCTGCAGC 1 chr3R:26085744-26085864 ( 38) GCAGCAGC 1 chr3R:30109542-30109662 ( 108) GCAGCAGC 1 chr3L:10870189-10870309 ( 26) GCAGCAGC 1 chr3R:15399124-15399244 ( 48) GCAGCAGC 1 chrX:6917748-6917868 ( 42) GCAGCAGC 1 chr3R:31660976-31661096 ( 48) GCAGCAGC 1 chr3R:13873523-13873643 ( 43) GCAGCAGC 1 chr3R:24716815-24716935 ( 33) GCAGCAGC 1 chr3R:18236771-18236891 ( 79) GCAGCAGC 1 chr3R:18011470-18011590 ( 12) GCAGCAGC 1 chr3L:16851705-16851825 ( 16) GCAGCAGC 1 chrX:12708445-12708565 ( 70) GCAGCAGC 1 chr3R:22602922-22603042 ( 36) GCAGCAGC 1 chr3L:7890105-7890225 ( 74) GCAGCAGC 1 chr3L:12329688-12329808 ( 21) GCAGCAGC 1 chr2L:11236503-11236623 ( 24) GCAGCAGC 1 chr3R:28237936-28238056 ( 87) GCAGCAGC 1 chr3R:29767353-29767473 ( 75) GCAGCAGC 1 chr3R:6801292-6801412 ( 12) GCAGCAGC 1 chr3L:21436212-21436332 ( 33) GCAGCAGC 1 chr3R:11375281-11375401 ( 46) GCAGCAGC 1 chr3L:21230901-21231021 ( 84) GCAGCAGC 1 chr3L:4729944-4730064 ( 22) GCAGCAGC 1 chr3L:3150589-3150709 ( 78) GCAGCAGC 1 chrX:9694792-9694912 ( 106) GCAGCAGC 1 chr2L:17402632-17402752 ( 81) GCAGCAGC 1 chr3L:11604339-11604459 ( 22) GCAGCAGC 1 chr2R:11208466-11208586 ( 75) GCAGCAGC 1 chr2L:9994539-9994659 ( 26) GCAGCAGC 1 chr3R:31370334-31370454 ( 63) GCAGCAGC 1 chr3R:29695883-29696003 ( 73) GCAGCAGC 1 chr2L:17973138-17973258 ( 45) GCAGCAGC 1 chr3L:10585077-10585197 ( 19) GCAGCAGC 1 chr2R:14040277-14040397 ( 19) GCAGCAGC 1 chr3R:20011081-20011201 ( 30) GCAGCAGC 1 chr3R:30360828-30360948 ( 42) GCAGCAGC 1 chr3L:4590190-4590310 ( 78) GCAGCAGC 1 chr2R:11810733-11810853 ( 105) GCAGCAGC 1 chr3R:19524625-19524745 ( 98) GCAGCAGC 1 chr3L:9708951-9709071 ( 43) GCAGCAGC 1 chr3R:19040824-19040944 ( 37) GCAGCAGC 1 chrX:6693639-6693759 ( 65) GTTGCTGC 1 chr3L:7764888-7765008 ( 50) GTTGCTGC 1 chr2R:17075625-17075745 ( 111) GTTGCTGC 1 chr3L:21549993-21550113 ( 10) GTTGCTGC 1 chr3L:14125755-14125875 ( 33) GTTGCTGC 1 chr2R:11645676-11645796 ( 22) GTTGCTGC 1 chr3L:16141695-16141815 ( 108) GTTGCTGC 1 chrX:10618630-10618750 ( 80) GTTGCTGC 1 chr3L:13430310-13430430 ( 99) GTTGCTGC 1 chr2L:17437733-17437853 ( 96) GTTGCTGC 1 chr3R:5877506-5877626 ( 55) GTTGCTGC 1 chr2L:7025422-7025542 ( 113) GTTGCTGC 1 chr3L:5327960-5328080 ( 4) GCTGCTAC 1 chr3L:888511-888631 ( 54) GCTGCAAC 1 chr3L:9471411-9471531 ( 88) GCAGCAAC 1 chr2R:7910419-7910539 ( 5) GCAGCAAC 1 chr2R:10612127-10612247 ( 50) GCAGCAAC 1 chr3R:12301667-12301787 ( 108) GCAGCAAC 1 chrX:6716309-6716429 ( 67) GCAGCAAC 1 chr3L:15605103-15605223 ( 68) GCAGCAAC 1 chr3L:2442469-2442589 ( 81) GCAGCAAC 1 chr2L:11255853-11255973 ( 13) ACAGCAGC 1 chr2L:13498064-13498184 ( 74) ACAGCAGC 1 chr3R:27533364-27533484 ( 67) ACAGCAGC 1 chrX:7662564-7662684 ( 113) ACAGCAGC 1 chr2R:18763039-18763159 ( 42) GCTGCTGT 1 chrX:3472614-3472734 ( 59) GCTGCTGT 1 chr3L:14025848-14025968 ( 85) GCTGCTGT 1 chr2L:8659688-8659808 ( 5) GTTGCAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.0297 E= 4.0e-105 -277 -1354 183 -1354 -1354 177 -1354 -112 95 -1354 -1354 122 -1354 -1354 188 -1354 -1354 194 -1354 -1354 101 -1354 -1354 117 -145 -1354 176 -1354 -1354 190 -1354 -324 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 119 E= 4.0e-105 0.033613 0.000000 0.966387 0.000000 0.000000 0.890756 0.000000 0.109244 0.445378 0.000000 0.000000 0.554622 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.462185 0.000000 0.000000 0.537815 0.084034 0.000000 0.915966 0.000000 0.000000 0.974790 0.000000 0.025210 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCWGCWGC MEME-2 regular expression -------------------------------------------------------------------------------- GC[TA]GC[TA]GC -------------------------------------------------------------------------------- Time 13.45 secs. ******************************************************************************** ******************************************************************************** MOTIF WGCWGCWG MEME-3 width = 8 sites = 138 llr = 1007 E-value = 9.9e-057 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 4::51:41 pos.-specific C ::9::9:: probability G :a::9::8 matrix T 6:15:161 bits 2.1 1.9 * 1.7 * 1.5 * ** Relative 1.3 ** ** Entropy 1.1 ******** (10.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGCTGCTG consensus A A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:14027717-14027837 108 1.81e-05 gtgctgcaat tgctgctg ctgct chr2L:7866048-7866168 64 1.81e-05 ctgctgctgc tgctgctg TTGTGGGTCC chr3L:8369930-8370050 32 1.81e-05 cagttgctgc tgctgctg ctgctgctgc chrX:6693639-6693759 49 1.81e-05 ttgatcctgt tgctgctg gtgaagatgt chr3R:16827730-16827850 84 1.81e-05 gcgatcgtgt tgctgctg ttgttgttgc chr3R:20820181-20820301 34 1.81e-05 ctgctgctgc tgctgctg ttgctgttcg chr2R:24333540-24333660 73 1.81e-05 ctgctgttgc tgctgctg ttgttgctgc chr3R:8167213-8167333 38 1.81e-05 GCGGATGTGT TGCTGCTG GCGGTGGTGT chr3L:2789555-2789675 73 1.81e-05 ctgctgctgt tgctgctg tagcacctgt chr3R:13873523-13873643 19 1.81e-05 ctgctgctgt tgctgctg gtgatgatgA chr3L:7764888-7765008 10 1.81e-05 tgctgatgt tgctgctg GGTATGTTGC chrX:7714031-7714151 34 1.81e-05 ttgctgtgcc tgctgctg ctgctgctgc chr2R:21221402-21221522 35 1.81e-05 gtgctgctgt tgctgctg ggcagttgct chr2R:10233930-10234050 65 1.81e-05 ctgctgttgt tgctgctg ttgctgttgc chrX:7686210-7686330 87 1.81e-05 ctgttccctg tgctgctg caggtgctcc chr2R:11645676-11645796 48 1.81e-05 ttactgctac tgctgctg tgttgtctgc chr2L:20690219-20690339 101 1.81e-05 tgctggcagc tgctgctg ctcggctgtc chr2L:241554-241674 71 1.81e-05 tgcttgctgt tgctgctg gggcgtgggc chrX:17940816-17940936 38 1.81e-05 ctgttgcagc tgctgctg cgtctgttgc chr3R:9232499-9232619 23 1.81e-05 ctgctgggga tgctgctg gtgtggatgc chr3R:7275112-7275232 59 1.81e-05 ttgctgctgc tgctgctg GGGCGGGACA chrX:12715083-12715203 91 1.81e-05 TTGGTCCTGT tgctgctg ctgctgctgc chr2L:16808891-16809011 95 1.81e-05 Ttgctgctgc tgctgctg ctgctgctgc chr3L:16141695-16141815 87 1.81e-05 ttgctgctac tgctgctg TGATGGAGAT chr2R:10990095-10990215 69 1.81e-05 ctgctgctat tgctgctg ttgctgctac chrX:21333274-21333394 62 1.81e-05 ctgctgctgc tgctgctg gtgctgctgc chr3L:14025848-14025968 108 1.81e-05 ttgctgctgc tgctgctg ttgcg chr2L:3605812-3605932 110 1.81e-05 ctgttgttgc tgctgctg gta chr3L:7161449-7161569 71 1.81e-05 ctgctgctgc tgctgctg ttggtggtgt chr2R:7740521-7740641 33 1.81e-05 cgtctgtgtc tgctgctg ctgctgttgc chrX:10607768-10607888 64 1.81e-05 cagctgctgg tgctgctg gtggaggtgg chr2L:5320206-5320326 83 1.81e-05 ctgctgctgt tgctgctg ttgttgctgc chr2L:18546565-18546685 73 1.81e-05 ctgctgttgt tgctgctg ttgcttgctg chr3L:13430310-13430430 89 1.81e-05 ctgctgctga tgctgctg atgttgctgc chr2R:9772203-9772323 15 1.81e-05 ttgctgctgc tgctgctg cagctgcatc chr3L:9840849-9840969 89 1.81e-05 ctgttgctgt tgctgctg atgttgctgc chr2L:17437733-17437853 83 1.81e-05 TGCTCCATAT tgctgctg ttgctgttgc chr2R:20958667-20958787 67 1.81e-05 gtgctgctgc tgctgctg atgcgacaag chr3R:5877506-5877626 91 1.81e-05 ctgctgttgg tgctgctg ttgctgttgT chrX:5080660-5080780 68 1.81e-05 gggtggttgt tgctgctg ttgtccagct chr3R:17905279-17905399 42 1.81e-05 ctgatgctgt tgctgctg atgctgctgc chr3R:23920526-23920646 72 1.81e-05 TTTCGTTtgt tgctgctg gaaaaactga chr3R:12975362-12975482 76 1.81e-05 GACAGGATAA TGCTGCTG GTGAGCAAAA chr3L:6750977-6751097 54 1.81e-05 ctgcacctga tgctgctg atgatgcatt chr3L:17077412-17077532 86 1.81e-05 ctgctgctgt tgctgctg ctgctgTTGC chr3L:17663786-17663906 61 1.81e-05 ctgctggtgt tgctgctg gtgctgttgc chrX:12831462-12831582 94 1.81e-05 ctgctgcagt tgctgctg tagatgttgc chr2R:18281210-18281330 25 1.81e-05 ctgctgttgt tgctgctg ctgctggtgt chr2R:13396574-13396694 70 1.81e-05 ttgctgctgt tgctgctg ttgtggctgc chr3R:30878263-30878383 110 1.81e-05 ctgcggctgc tgctgctg ctg chr3L:2871319-2871439 87 1.81e-05 ctgctgctgc tgctgctg ttgctgctgc chr3R:5176083-5176203 100 1.81e-05 ttgctgctgc tgctgctg ctggtatggc chr3L:8437753-8437873 71 1.81e-05 ctgcatgtgt tgctgctg atgttgatgg chrX:3472614-3472734 99 3.57e-05 ATTTCACCAT TGCAGCTG ATTATGGTCG chr2L:5321143-5321263 13 3.57e-05 ctgttgttgc tgcagctg agcaggctgt chr3R:15399124-15399244 20 8.77e-05 AATGTTGGCC Tgcagcag caacagcaac chr3L:10870189-10870309 7 1.38e-04 aacagc agcagcag caacagtacc chrX:6917748-6917868 11 1.38e-04 gaataCcagc agcagcag cactaccagc chr3R:31660976-31661096 59 1.38e-04 cagcagcacc agcagcag catcaacatc chr3R:18011470-18011590 29 1.38e-04 cagcagcagc agcagcag caactccaga chrX:12708445-12708565 12 1.38e-04 Gagcaacaac agcagcag caacaacagc chr3R:22602922-22603042 92 1.38e-04 cagcaacatc agcagcag caacaacagc chr3L:7890105-7890225 37 1.38e-04 caccaccacc agcagcag caacaacaac chr3R:28237936-28238056 41 1.38e-04 cagcatcagc agcagcag cactatatcc chr3R:29767353-29767473 8 1.38e-04 caacagc agcagcag cagcatctag chr3L:21436212-21436332 101 1.38e-04 ccgtcccagc agcagcag cagcaTATCG chr3R:11375281-11375401 3 1.38e-04 ac agcagcag gagcaacagc chr3L:21230901-21231021 18 1.38e-04 cagctgcaac agcagcag cagcaccagc chr3L:3150589-3150709 47 1.38e-04 caccagcagc agcagcag ttgcagcagc chr2L:17402632-17402752 39 1.38e-04 cagcaacagc agcagcag cagcagcagc chr3L:11604339-11604459 12 1.38e-04 caacagcaac agcagcag cagcagcagc chr3R:31370334-31370454 86 1.38e-04 cagcagcaac agcagcag cagcaacagc chr3L:6947711-6947831 66 1.38e-04 ctcaatcagc agcagcag cagcaacttt chr2L:17973138-17973258 35 1.38e-04 cagcagcaac agcagcag cagcagcagc chr3L:10585077-10585197 87 1.38e-04 caacaacaac agcagcag cagcaacaac chr2R:14040277-14040397 102 1.38e-04 AACAAACAAc agcagcag caacaggtgc chr3R:20011081-20011201 5 1.38e-04 caac agcagcag caacagcagc chr3L:15605103-15605223 58 1.38e-04 cagcagcagc agcagcag gagcagcaac chr3L:4590190-4590310 62 1.38e-04 cagcagcagc agcagcag taccaaccgc chr3L:9708951-9709071 12 1.38e-04 caccaccaac agcagcag cagcagcagc chr3R:14965424-14965544 48 1.53e-04 TGTACGGGTT TGCTGCTA GTGCTGCTGC chr2R:12219620-12219740 32 2.00e-04 AATGCAAAAA TGCTGTTG ATGCATCTGG chr3L:14024842-14024962 23 2.00e-04 ttgcattaac tgctgttg ttgtaggtac chr3L:21549993-21550113 99 2.00e-04 CGAAAGCTGT TGCTGTTG GCCAGCTTGC chr3R:24716815-24716935 95 2.44e-04 caacagcagt tgcagcaa ccagtgcagc chr3L:14125755-14125875 44 2.44e-04 TTGCTGCTGT TGCTACTG CACGGGTGGT chr2L:12276874-12276994 95 2.60e-04 TGATTCTAAC TGCAGTTG ACATGCACAT chr2L:5821069-5821189 30 2.60e-04 GTGAACTAAC TGCAGTTG GTTGGTGGGG chr3L:19844646-19844766 11 2.60e-04 CACCAAATGA TGCAGTTG CAGGGTATGg chrX:9093201-9093321 96 3.06e-04 aactgttttg agcagcta gttaccaatg chr2L:1864018-1864138 77 3.35e-04 CCCTCTTAAA AGCTGCAA TCCAATTCGA chrX:7689031-7689151 75 3.83e-04 ttgttgttgt tgttgctg ctgctgctgc chrX:7310561-7310681 92 4.42e-04 AAACTAAGGA AGCAGCAA TCCCACCAAT chr3R:26085744-26085864 73 4.42e-04 caacagcaac tgcaacag cagccaccgc chr3R:30109542-30109662 62 4.42e-04 cccagtcatc agcagcaa cagcaacatc chr2L:20953203-20953323 92 4.42e-04 ccatccgctt tgctgctt ttgatggctg chr3L:16851705-16851825 108 4.42e-04 caacaacgtg tgcaacag caacg chrX:10340631-10340751 64 4.42e-04 aacagttttg agcagcaa attaccagtg chr3L:12329688-12329808 77 4.42e-04 CAGCAACACC AGCAGCAA CACGCTGCCT chr3L:4729944-4730064 66 4.42e-04 caacatcaac agcagcaa catcagaagc chrX:9694792-9694912 96 4.42e-04 caacaacaac agcagcaa cagcagcagc chr2R:11208466-11208586 8 4.42e-04 gggaaac tgcaacag caaccatagt chr2L:9994539-9994659 79 4.42e-04 ATGCAACAAC AGCAGCAA CATTATGGAA chr2R:19183230-19183350 87 4.42e-04 tttgCTGATT TGCTGCTT GTTTGGTTTC chr3R:12301667-12301787 72 4.42e-04 cgactgcaat tgcaacag caacagcaac chr2R:18746006-18746126 26 4.42e-04 cagctgcagc agcagcaa cagcagcatg chrX:6716309-6716429 102 4.42e-04 gagcggctca agcagcaa cgccagcaac chr3L:2442469-2442589 68 4.42e-04 acaacgcaac agcagcaa catcagcagc chr3R:30360828-30360948 2 4.42e-04 c agcagcaa cagacacaac chr3R:19524625-19524745 64 5.35e-04 catcaacagc agcaactg cagcatcagc chr2R:23349975-23350095 103 5.35e-04 GAGTGCAGCA TGTTGCAG GTTGCAGACG chr3R:19040824-19040944 15 5.35e-04 ccgtaccagc agcaactg gaaaaacagc chr2R:17075625-17075745 7 5.65e-04 tgcaga tgctgcat ccgactcact chr3L:888511-888631 36 5.65e-04 ACCTTGTTGT AGCTACAG TGGCACCTca chrX:8185049-8185169 110 6.30e-04 ATGATGATGG TGGTGCTG ATG chr3R:29695883-29696003 108 6.74e-04 cagcaccacc agcaacag cagca chr2R:10612127-10612247 28 6.74e-04 caacagcatc agcaacag cagcatcaac chr3L:9471411-9471531 22 7.08e-04 cagcaggagc agtagctg gaacgcctac chrX:8739027-8739147 87 7.57e-04 GGGGGGGGGG TGGTGCAG TCAGTCAAGA chr3R:15627413-15627533 91 7.57e-04 TCTGCGCATA AGCAGCTT GACTCTTGCC chr3R:28775842-28775962 40 7.86e-04 GCAGTTTGTT AGCTGCAT GCCACAGcga chrX:10618630-10618750 2 7.86e-04 c tgctgtta gttttagtgt chr3R:9744154-9744274 11 8.50e-04 GGGGCGGTCC AGGTGCTG GTGGAGGTGC chr3R:31765284-31765404 111 8.50e-04 GATCTCGATG TGGAGCAG TA chr3R:21445466-21445586 101 1.01e-03 CGTGCGTGGT TGCAGTAA TCCGCCCGAG chrX:18895036-18895156 65 1.05e-03 AGTACTCCGG AGGAGCAG CCCCCGCCGG chr3R:11441177-11441297 71 1.05e-03 gggcggGAAC TGCAACAA TAAAACACGG chr2R:14032758-14032878 110 1.05e-03 CGGAGAGGGT AGGAGCAG ATC chr2L:19594241-19594361 52 1.09e-03 CATTTGCTTG TGCAATTG CACATAAATC chr3R:14578248-14578368 87 1.17e-03 CCGAAGCAAA TGTTGTTG TTTTGGTGCT chr3L:11542576-11542696 32 1.17e-03 ctgttgttgt tgttgttg tggtcgtCTT chr2L:8659688-8659808 100 1.17e-03 CATCTACTTG TGTTGTTG TTTCGAATAT chr3R:18422611-18422731 112 1.17e-03 GGCATGGAGT TGTTGTTG C chr3R:11460266-11460386 16 1.28e-03 TTATTTTATT TGCTGTTT ATACTTGTGG chr2L:11236503-11236623 11 1.32e-03 caacagcaat agcaacaa ccacagcagc chr2L:6888241-6888361 79 1.40e-03 CAGTCGATTT TGCAGTTT CAATTTGGTA chr2R:14712934-14713054 82 1.55e-03 GGATCATCGG TGTAGTAG TAATTACGAT chr2R:14508769-14508889 7 1.69e-03 GCAACA AGTAGCAA TTCCTTGGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:14027717-14027837 1.8e-05 107_[+3]_5 chr2L:7866048-7866168 1.8e-05 63_[+3]_49 chr3L:8369930-8370050 1.8e-05 31_[+3]_81 chrX:6693639-6693759 1.8e-05 48_[+3]_64 chr3R:16827730-16827850 1.8e-05 83_[+3]_29 chr3R:20820181-20820301 1.8e-05 33_[+3]_79 chr2R:24333540-24333660 1.8e-05 72_[+3]_40 chr3R:8167213-8167333 1.8e-05 37_[+3]_75 chr3L:2789555-2789675 1.8e-05 72_[+3]_40 chr3R:13873523-13873643 1.8e-05 18_[+3]_94 chr3L:7764888-7765008 1.8e-05 9_[+3]_103 chrX:7714031-7714151 1.8e-05 33_[+3]_79 chr2R:21221402-21221522 1.8e-05 34_[+3]_78 chr2R:10233930-10234050 1.8e-05 64_[+3]_48 chrX:7686210-7686330 1.8e-05 86_[+3]_26 chr2R:11645676-11645796 1.8e-05 47_[+3]_65 chr2L:20690219-20690339 1.8e-05 100_[+3]_12 chr2L:241554-241674 1.8e-05 70_[+3]_42 chrX:17940816-17940936 1.8e-05 37_[+3]_75 chr3R:9232499-9232619 1.8e-05 22_[+3]_90 chr3R:7275112-7275232 1.8e-05 58_[+3]_54 chrX:12715083-12715203 1.8e-05 90_[+3]_22 chr2L:16808891-16809011 1.8e-05 94_[+3]_18 chr3L:16141695-16141815 1.8e-05 86_[+3]_26 chr2R:10990095-10990215 1.8e-05 68_[+3]_44 chrX:21333274-21333394 1.8e-05 61_[+3]_51 chr3L:14025848-14025968 1.8e-05 107_[+3]_5 chr2L:3605812-3605932 1.8e-05 109_[+3]_3 chr3L:7161449-7161569 1.8e-05 70_[+3]_42 chr2R:7740521-7740641 1.8e-05 32_[+3]_80 chrX:10607768-10607888 1.8e-05 63_[+3]_49 chr2L:5320206-5320326 1.8e-05 82_[+3]_30 chr2L:18546565-18546685 1.8e-05 72_[+3]_40 chr3L:13430310-13430430 1.8e-05 88_[+3]_24 chr2R:9772203-9772323 1.8e-05 14_[+3]_98 chr3L:9840849-9840969 1.8e-05 88_[+3]_24 chr2L:17437733-17437853 1.8e-05 82_[+3]_30 chr2R:20958667-20958787 1.8e-05 66_[+3]_46 chr3R:5877506-5877626 1.8e-05 90_[+3]_22 chrX:5080660-5080780 1.8e-05 67_[+3]_45 chr3R:17905279-17905399 1.8e-05 41_[+3]_71 chr3R:23920526-23920646 1.8e-05 71_[+3]_41 chr3R:12975362-12975482 1.8e-05 75_[+3]_37 chr3L:6750977-6751097 1.8e-05 53_[+3]_59 chr3L:17077412-17077532 1.8e-05 85_[+3]_27 chr3L:17663786-17663906 1.8e-05 60_[+3]_52 chrX:12831462-12831582 1.8e-05 93_[+3]_19 chr2R:18281210-18281330 1.8e-05 24_[+3]_88 chr2R:13396574-13396694 1.8e-05 69_[+3]_43 chr3R:30878263-30878383 1.8e-05 109_[+3]_3 chr3L:2871319-2871439 1.8e-05 86_[+3]_26 chr3R:5176083-5176203 1.8e-05 99_[+3]_13 chr3L:8437753-8437873 1.8e-05 70_[+3]_42 chrX:3472614-3472734 3.6e-05 98_[+3]_14 chr2L:5321143-5321263 3.6e-05 12_[+3]_100 chr3R:15399124-15399244 8.8e-05 19_[+3]_93 chr3L:10870189-10870309 0.00014 6_[+3]_106 chrX:6917748-6917868 0.00014 10_[+3]_102 chr3R:31660976-31661096 0.00014 58_[+3]_54 chr3R:18011470-18011590 0.00014 28_[+3]_84 chrX:12708445-12708565 0.00014 11_[+3]_101 chr3R:22602922-22603042 0.00014 91_[+3]_21 chr3L:7890105-7890225 0.00014 36_[+3]_76 chr3R:28237936-28238056 0.00014 40_[+3]_72 chr3R:29767353-29767473 0.00014 7_[+3]_105 chr3L:21436212-21436332 0.00014 100_[+3]_12 chr3R:11375281-11375401 0.00014 2_[+3]_110 chr3L:21230901-21231021 0.00014 17_[+3]_95 chr3L:3150589-3150709 0.00014 46_[+3]_66 chr2L:17402632-17402752 0.00014 38_[+3]_74 chr3L:11604339-11604459 0.00014 11_[+3]_101 chr3R:31370334-31370454 0.00014 85_[+3]_27 chr3L:6947711-6947831 0.00014 65_[+3]_47 chr2L:17973138-17973258 0.00014 34_[+3]_78 chr3L:10585077-10585197 0.00014 86_[+3]_26 chr2R:14040277-14040397 0.00014 101_[+3]_11 chr3R:20011081-20011201 0.00014 4_[+3]_108 chr3L:15605103-15605223 0.00014 57_[+3]_55 chr3L:4590190-4590310 0.00014 61_[+3]_51 chr3L:9708951-9709071 0.00014 11_[+3]_101 chr3R:14965424-14965544 0.00015 47_[+3]_65 chr2R:12219620-12219740 0.0002 31_[+3]_81 chr3L:14024842-14024962 0.0002 22_[+3]_90 chr3L:21549993-21550113 0.0002 98_[+3]_14 chr3R:24716815-24716935 0.00024 94_[+3]_18 chr3L:14125755-14125875 0.00024 43_[+3]_69 chr2L:12276874-12276994 0.00026 94_[+3]_18 chr2L:5821069-5821189 0.00026 29_[+3]_83 chr3L:19844646-19844766 0.00026 10_[+3]_102 chrX:9093201-9093321 0.00031 95_[+3]_17 chr2L:1864018-1864138 0.00033 76_[+3]_36 chrX:7689031-7689151 0.00038 74_[+3]_38 chrX:7310561-7310681 0.00044 91_[+3]_21 chr3R:26085744-26085864 0.00044 72_[+3]_40 chr3R:30109542-30109662 0.00044 61_[+3]_51 chr2L:20953203-20953323 0.00044 91_[+3]_21 chr3L:16851705-16851825 0.00044 107_[+3]_5 chrX:10340631-10340751 0.00044 63_[+3]_49 chr3L:12329688-12329808 0.00044 76_[+3]_36 chr3L:4729944-4730064 0.00044 65_[+3]_47 chrX:9694792-9694912 0.00044 95_[+3]_17 chr2R:11208466-11208586 0.00044 7_[+3]_105 chr2L:9994539-9994659 0.00044 78_[+3]_34 chr2R:19183230-19183350 0.00044 86_[+3]_26 chr3R:12301667-12301787 0.00044 71_[+3]_41 chr2R:18746006-18746126 0.00044 25_[+3]_87 chrX:6716309-6716429 0.00044 101_[+3]_11 chr3L:2442469-2442589 0.00044 67_[+3]_45 chr3R:30360828-30360948 0.00044 1_[+3]_111 chr3R:19524625-19524745 0.00053 63_[+3]_49 chr2R:23349975-23350095 0.00053 102_[+3]_10 chr3R:19040824-19040944 0.00053 14_[+3]_98 chr2R:17075625-17075745 0.00056 6_[+3]_106 chr3L:888511-888631 0.00056 35_[+3]_77 chrX:8185049-8185169 0.00063 109_[+3]_3 chr3R:29695883-29696003 0.00067 107_[+3]_5 chr2R:10612127-10612247 0.00067 27_[+3]_85 chr3L:9471411-9471531 0.00071 21_[+3]_91 chrX:8739027-8739147 0.00076 86_[+3]_26 chr3R:15627413-15627533 0.00076 90_[+3]_22 chr3R:28775842-28775962 0.00079 39_[+3]_73 chrX:10618630-10618750 0.00079 1_[+3]_111 chr3R:9744154-9744274 0.00085 10_[+3]_102 chr3R:31765284-31765404 0.00085 110_[+3]_2 chr3R:21445466-21445586 0.001 100_[+3]_12 chrX:18895036-18895156 0.001 64_[+3]_48 chr3R:11441177-11441297 0.001 70_[+3]_42 chr2R:14032758-14032878 0.001 109_[+3]_3 chr2L:19594241-19594361 0.0011 51_[+3]_61 chr3R:14578248-14578368 0.0012 86_[+3]_26 chr3L:11542576-11542696 0.0012 31_[+3]_81 chr2L:8659688-8659808 0.0012 99_[+3]_13 chr3R:18422611-18422731 0.0012 111_[+3]_1 chr3R:11460266-11460386 0.0013 15_[+3]_97 chr2L:11236503-11236623 0.0013 10_[+3]_102 chr2L:6888241-6888361 0.0014 78_[+3]_34 chr2R:14712934-14713054 0.0015 81_[+3]_31 chr2R:14508769-14508889 0.0017 6_[+3]_106 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGCWGCWG width=8 seqs=138 chr3L:14027717-14027837 ( 108) TGCTGCTG 1 chr2L:7866048-7866168 ( 64) TGCTGCTG 1 chr3L:8369930-8370050 ( 32) TGCTGCTG 1 chrX:6693639-6693759 ( 49) TGCTGCTG 1 chr3R:16827730-16827850 ( 84) TGCTGCTG 1 chr3R:20820181-20820301 ( 34) TGCTGCTG 1 chr2R:24333540-24333660 ( 73) TGCTGCTG 1 chr3R:8167213-8167333 ( 38) TGCTGCTG 1 chr3L:2789555-2789675 ( 73) TGCTGCTG 1 chr3R:13873523-13873643 ( 19) TGCTGCTG 1 chr3L:7764888-7765008 ( 10) TGCTGCTG 1 chrX:7714031-7714151 ( 34) TGCTGCTG 1 chr2R:21221402-21221522 ( 35) TGCTGCTG 1 chr2R:10233930-10234050 ( 65) TGCTGCTG 1 chrX:7686210-7686330 ( 87) TGCTGCTG 1 chr2R:11645676-11645796 ( 48) TGCTGCTG 1 chr2L:20690219-20690339 ( 101) TGCTGCTG 1 chr2L:241554-241674 ( 71) TGCTGCTG 1 chrX:17940816-17940936 ( 38) TGCTGCTG 1 chr3R:9232499-9232619 ( 23) TGCTGCTG 1 chr3R:7275112-7275232 ( 59) TGCTGCTG 1 chrX:12715083-12715203 ( 91) TGCTGCTG 1 chr2L:16808891-16809011 ( 95) TGCTGCTG 1 chr3L:16141695-16141815 ( 87) TGCTGCTG 1 chr2R:10990095-10990215 ( 69) TGCTGCTG 1 chrX:21333274-21333394 ( 62) TGCTGCTG 1 chr3L:14025848-14025968 ( 108) TGCTGCTG 1 chr2L:3605812-3605932 ( 110) TGCTGCTG 1 chr3L:7161449-7161569 ( 71) TGCTGCTG 1 chr2R:7740521-7740641 ( 33) TGCTGCTG 1 chrX:10607768-10607888 ( 64) TGCTGCTG 1 chr2L:5320206-5320326 ( 83) TGCTGCTG 1 chr2L:18546565-18546685 ( 73) TGCTGCTG 1 chr3L:13430310-13430430 ( 89) TGCTGCTG 1 chr2R:9772203-9772323 ( 15) TGCTGCTG 1 chr3L:9840849-9840969 ( 89) TGCTGCTG 1 chr2L:17437733-17437853 ( 83) TGCTGCTG 1 chr2R:20958667-20958787 ( 67) TGCTGCTG 1 chr3R:5877506-5877626 ( 91) TGCTGCTG 1 chrX:5080660-5080780 ( 68) TGCTGCTG 1 chr3R:17905279-17905399 ( 42) TGCTGCTG 1 chr3R:23920526-23920646 ( 72) TGCTGCTG 1 chr3R:12975362-12975482 ( 76) TGCTGCTG 1 chr3L:6750977-6751097 ( 54) TGCTGCTG 1 chr3L:17077412-17077532 ( 86) TGCTGCTG 1 chr3L:17663786-17663906 ( 61) TGCTGCTG 1 chrX:12831462-12831582 ( 94) TGCTGCTG 1 chr2R:18281210-18281330 ( 25) TGCTGCTG 1 chr2R:13396574-13396694 ( 70) TGCTGCTG 1 chr3R:30878263-30878383 ( 110) TGCTGCTG 1 chr3L:2871319-2871439 ( 87) TGCTGCTG 1 chr3R:5176083-5176203 ( 100) TGCTGCTG 1 chr3L:8437753-8437873 ( 71) TGCTGCTG 1 chrX:3472614-3472734 ( 99) TGCAGCTG 1 chr2L:5321143-5321263 ( 13) TGCAGCTG 1 chr3R:15399124-15399244 ( 20) TGCAGCAG 1 chr3L:10870189-10870309 ( 7) AGCAGCAG 1 chrX:6917748-6917868 ( 11) AGCAGCAG 1 chr3R:31660976-31661096 ( 59) AGCAGCAG 1 chr3R:18011470-18011590 ( 29) AGCAGCAG 1 chrX:12708445-12708565 ( 12) AGCAGCAG 1 chr3R:22602922-22603042 ( 92) AGCAGCAG 1 chr3L:7890105-7890225 ( 37) AGCAGCAG 1 chr3R:28237936-28238056 ( 41) AGCAGCAG 1 chr3R:29767353-29767473 ( 8) AGCAGCAG 1 chr3L:21436212-21436332 ( 101) AGCAGCAG 1 chr3R:11375281-11375401 ( 3) AGCAGCAG 1 chr3L:21230901-21231021 ( 18) AGCAGCAG 1 chr3L:3150589-3150709 ( 47) AGCAGCAG 1 chr2L:17402632-17402752 ( 39) AGCAGCAG 1 chr3L:11604339-11604459 ( 12) AGCAGCAG 1 chr3R:31370334-31370454 ( 86) AGCAGCAG 1 chr3L:6947711-6947831 ( 66) AGCAGCAG 1 chr2L:17973138-17973258 ( 35) AGCAGCAG 1 chr3L:10585077-10585197 ( 87) AGCAGCAG 1 chr2R:14040277-14040397 ( 102) AGCAGCAG 1 chr3R:20011081-20011201 ( 5) AGCAGCAG 1 chr3L:15605103-15605223 ( 58) AGCAGCAG 1 chr3L:4590190-4590310 ( 62) AGCAGCAG 1 chr3L:9708951-9709071 ( 12) AGCAGCAG 1 chr3R:14965424-14965544 ( 48) TGCTGCTA 1 chr2R:12219620-12219740 ( 32) TGCTGTTG 1 chr3L:14024842-14024962 ( 23) TGCTGTTG 1 chr3L:21549993-21550113 ( 99) TGCTGTTG 1 chr3R:24716815-24716935 ( 95) TGCAGCAA 1 chr3L:14125755-14125875 ( 44) TGCTACTG 1 chr2L:12276874-12276994 ( 95) TGCAGTTG 1 chr2L:5821069-5821189 ( 30) TGCAGTTG 1 chr3L:19844646-19844766 ( 11) TGCAGTTG 1 chrX:9093201-9093321 ( 96) AGCAGCTA 1 chr2L:1864018-1864138 ( 77) AGCTGCAA 1 chrX:7689031-7689151 ( 75) TGTTGCTG 1 chrX:7310561-7310681 ( 92) AGCAGCAA 1 chr3R:26085744-26085864 ( 73) TGCAACAG 1 chr3R:30109542-30109662 ( 62) AGCAGCAA 1 chr2L:20953203-20953323 ( 92) TGCTGCTT 1 chr3L:16851705-16851825 ( 108) TGCAACAG 1 chrX:10340631-10340751 ( 64) AGCAGCAA 1 chr3L:12329688-12329808 ( 77) AGCAGCAA 1 chr3L:4729944-4730064 ( 66) AGCAGCAA 1 chrX:9694792-9694912 ( 96) AGCAGCAA 1 chr2R:11208466-11208586 ( 8) TGCAACAG 1 chr2L:9994539-9994659 ( 79) AGCAGCAA 1 chr2R:19183230-19183350 ( 87) TGCTGCTT 1 chr3R:12301667-12301787 ( 72) TGCAACAG 1 chr2R:18746006-18746126 ( 26) AGCAGCAA 1 chrX:6716309-6716429 ( 102) AGCAGCAA 1 chr3L:2442469-2442589 ( 68) AGCAGCAA 1 chr3R:30360828-30360948 ( 2) AGCAGCAA 1 chr3R:19524625-19524745 ( 64) AGCAACTG 1 chr2R:23349975-23350095 ( 103) TGTTGCAG 1 chr3R:19040824-19040944 ( 15) AGCAACTG 1 chr2R:17075625-17075745 ( 7) TGCTGCAT 1 chr3L:888511-888631 ( 36) AGCTACAG 1 chrX:8185049-8185169 ( 110) TGGTGCTG 1 chr3R:29695883-29696003 ( 108) AGCAACAG 1 chr2R:10612127-10612247 ( 28) AGCAACAG 1 chr3L:9471411-9471531 ( 22) AGTAGCTG 1 chrX:8739027-8739147 ( 87) TGGTGCAG 1 chr3R:15627413-15627533 ( 91) AGCAGCTT 1 chr3R:28775842-28775962 ( 40) AGCTGCAT 1 chrX:10618630-10618750 ( 2) TGCTGTTA 1 chr3R:9744154-9744274 ( 11) AGGTGCTG 1 chr3R:31765284-31765404 ( 111) TGGAGCAG 1 chr3R:21445466-21445586 ( 101) TGCAGTAA 1 chrX:18895036-18895156 ( 65) AGGAGCAG 1 chr3R:11441177-11441297 ( 71) TGCAACAA 1 chr2R:14032758-14032878 ( 110) AGGAGCAG 1 chr2L:19594241-19594361 ( 52) TGCAATTG 1 chr3R:14578248-14578368 ( 87) TGTTGTTG 1 chr3L:11542576-11542696 ( 32) TGTTGTTG 1 chr2L:8659688-8659808 ( 100) TGTTGTTG 1 chr3R:18422611-18422731 ( 112) TGTTGTTG 1 chr3R:11460266-11460386 ( 16) TGCTGTTT 1 chr2L:11236503-11236623 ( 11) AGCAACAA 1 chr2L:6888241-6888361 ( 79) TGCAGTTT 1 chr2R:14712934-14713054 ( 82) TGTAGTAG 1 chr2R:14508769-14508889 ( 7) AGTAGCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.48181 E= 9.9e-057 66 -1375 -1375 142 -1375 -1375 188 -1375 -1375 178 -264 -187 99 -1375 -1375 119 -129 -1375 174 -1375 -1375 176 -1375 -104 84 -1375 -1375 130 -67 -1375 157 -223 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 138 E= 9.9e-057 0.362319 0.000000 0.000000 0.637681 0.000000 0.000000 1.000000 0.000000 0.000000 0.891304 0.043478 0.065217 0.456522 0.000000 0.000000 0.543478 0.094203 0.000000 0.905797 0.000000 0.000000 0.884058 0.000000 0.115942 0.413043 0.000000 0.000000 0.586957 0.144928 0.000000 0.804348 0.050725 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCWGCWG MEME-3 regular expression -------------------------------------------------------------------------------- [TA]GC[TA]GC[TA]G -------------------------------------------------------------------------------- Time 19.29 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTTGCTG MEME-4 width = 8 sites = 91 llr = 735 E-value = 1.5e-042 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::1:1 pos.-specific C ::21:72: probability G :a1:a1:9 matrix T a:79:28: bits 2.1 * 1.9 ** 1.7 ** ** 1.5 ** ** * Relative 1.3 ** ** ** Entropy 1.1 ** ** ** (11.7 bits) 0.8 ** ** ** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGTTGCTG consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:14027717-14027837 78 1.66e-05 ctgctgctgt tgttgctg catctggtgt chr3L:14024842-14024962 2 1.66e-05 c tgttgctg tttttgcatt chrX:6693639-6693759 79 1.66e-05 ctgctggaac tgttgctg ttgttgctga chr3R:16827730-16827850 96 1.66e-05 ctgctgttgt tgttgctg ctgctgctgg chr2R:24333540-24333660 55 1.66e-05 ttgctgctgc tgttgctg ctgctgttgc chr3R:8167213-8167333 53 1.66e-05 CTGGCGGTGG TGTTGCTG CTACTTtgct chr3L:2789555-2789675 52 1.66e-05 ctgttgttgc tgttgctg ctgctgctgc chr3L:7764888-7765008 22 1.66e-05 ctgctgGGTA TGTTGCTG CAACTGTGAG chrX:7714031-7714151 22 1.66e-05 ctgctgctgt tgttgctg tgcctgctgc chr3L:21549993-21550113 66 1.66e-05 ctgcaagatc tgttgctg aatttgaaga chr2R:21221402-21221522 2 1.66e-05 t tgttgctg ctgttggtgt chr2R:10233930-10234050 77 1.66e-05 ctgctgttgc tgttgctg ctgctgctgc chrX:7686210-7686330 63 1.66e-05 ctgctgttgc tgttgctg caactgctgt chr2R:11645676-11645796 30 1.66e-05 atgttgctgc tgttgctg ttactgctac chr2L:241554-241674 32 1.66e-05 ctgttgttgt tgttgctg cgcctgctgt chrX:17940816-17940936 23 1.66e-05 tgtgtgggac tgttgctg ttgcagctgc chr3R:9232499-9232619 47 1.66e-05 atgctgatgt tgttgctg ggctgcaact chr3R:7275112-7275232 77 1.66e-05 GGGCGGGACA TGTTGCTG CGGCGGGACT chrX:12715083-12715203 10 1.66e-05 tgctgttgt tgttgctg ctgctgctgc chr2L:16808891-16809011 46 1.66e-05 TTGTTGCTCG TGTTGCTG CTACTACTGC chr3L:16141695-16141815 47 1.66e-05 tgtcatgcgt tgttgctg gtggtgggaa chrX:21333274-21333394 83 1.66e-05 ctgctgcagc tgttgctg gtgctgttgc chr2L:3605812-3605932 44 1.66e-05 agcctgatgt tgttgctg ctgctgctgc chrX:10607768-10607888 85 1.66e-05 gaggtggtgc tgttgctg ctgatgctgc chr2L:5320206-5320326 92 1.66e-05 ttgctgctgt tgttgctg ctgctgttgt chr2L:18546565-18546685 49 1.66e-05 ttgctgttgc tgttgctg ttgctgctgc chr3L:13430310-13430430 2 1.66e-05 C TGTTGCTG ATGTGCATCG chr2R:9772203-9772323 53 1.66e-05 gtcgcgggag tgttgctg tcgataattg chr3L:9840849-9840969 80 1.66e-05 ctgctgctgc tgttgctg ttgctgctga chr2R:20958667-20958787 43 1.66e-05 ctgcgaatgg tgttgctg ttgcgagtgc chrX:5080660-5080780 12 1.66e-05 ttgctgcagt tgttgctg ctactgctac chr3L:6750977-6751097 81 1.66e-05 tacaacttgt tgttgctg ttgttggtgc chrX:12831462-12831582 106 1.66e-05 ctgctgtaga tgttgctg ctgctgc chr2R:18281210-18281330 58 1.66e-05 ctgctgctgc tgttgctg ggcctggtgc chr2R:13396574-13396694 58 1.66e-05 ctgttgctgc tgttgctg ctgttgctgc chr3R:30878263-30878383 14 1.66e-05 ttgctgcaga tgttgctg GTGTTTTCTG chr3L:2871319-2871439 18 1.66e-05 tggctgttgc tgttgctg ctgctgctgt chr2L:5321143-5321263 64 1.66e-05 ctgctgctga tgttgctg ttggcttatc chr3L:8437753-8437873 26 1.66e-05 ctgctgttgg tgttgctg ctgatgttgt chr3L:8369930-8370050 41 3.47e-05 ctgctgctgc tgctgctg cggctgctgt chr3R:20820181-20820301 25 3.47e-05 ATGAACCGgc tgctgctg ctgctgctgt chr3L:7161449-7161569 98 3.47e-05 ttgctgctgc tgctgctg gtggtgcttc chr2R:7740521-7740641 12 3.47e-05 ctgctgcgcc tgctgctg ttgcgtctgt chr2L:17437733-17437853 2 3.47e-05 c tgctgctg atgctgctgc chr3R:17905279-17905399 27 3.47e-05 ttgctgcacc tgctgctg atgctgttgc chrX:7689031-7689151 54 4.99e-05 ttgttgttgt tgttgttg ttgttgttgt chr2L:20953203-20953323 56 4.99e-05 GCACAgttgt tgttgttg ttgttgttgc chr3L:11542576-11542696 23 4.99e-05 ctgctgctgc tgttgttg ttgttgttgt chrX:10618630-10618750 112 4.99e-05 cgcgaatgct tgttgttg c chr3L:17077412-17077532 62 4.99e-05 ctgctgctgc tgttgttg ttgctgctgc chr3L:17663786-17663906 37 4.99e-05 TGGCGTGTTc tgttgttg ctgctgctgc chr3L:20192014-20192134 65 4.99e-05 ttgttgttgt tgttgttg ttattgttac chrX:3472614-3472734 43 6.81e-05 TGTGTTGCAA tgttgccg ctgtgtccgc chr2R:5154278-5154398 85 6.81e-05 tgttgaccca tgttgccg ccaaaccggt chr2R:21583187-21583307 14 6.81e-05 GCTGTGTTAA TGTTGCCG CAGGACTTAG chr3L:14125755-14125875 58 1.01e-04 ACTGCACGGG TGGTGCTG ATGCTGCTGC chr3R:14578248-14578368 98 1.01e-04 GTTGTTGTTT TGGTGCTG ACCAGTAATT chrX:1715013-1715133 8 1.18e-04 CCCAGCA TGTTGgtg tgtgtgtgtt chr3L:2328943-2329063 54 1.33e-04 AGATAGTAGA TGTTGATG GGGGGGGGGG chr3L:14025848-14025968 48 1.50e-04 GGTAGTAGGT TGCTGTTG CAGTGGCGAT chr3R:5877506-5877626 100 1.50e-04 gtgctgctgt tgctgttg TATCTGGGGG chr2R:10990095-10990215 21 1.69e-04 GGCTGGTCgc tgctgccg ctgatgctgc chr2L:9994539-9994659 97 1.69e-04 CATTATGGAA TGCTGCCG CTGAGGCCCA chr2R:13327309-13327429 27 1.88e-04 tgtgtgtgtg tgtCGCTG CTTTATCGCC chr2L:20690219-20690339 2 2.04e-04 c tgatgctg ctcctcccgc chr2L:21383675-21383795 69 2.67e-04 tgttgatcca tgttgtta agcccactct chr2R:17075625-17075745 57 2.67e-04 ttgctgctgc tgctggtg cgtttcatgg chr3L:22063348-22063468 54 3.16e-04 ctttgactca tgttgcca cgcccacaaa chr2L:22163441-22163561 33 3.16e-04 tgttggccca tgttgcca cgcccactct chr2R:1595434-1595554 20 3.16e-04 tgttgaccca tgttgcca cgcccaccgt chr3R:18422611-18422731 61 3.16e-04 ctgctgctgg tggtgttg cggctgcaat chr3R:9744154-9744274 32 3.37e-04 GAGGTGCCCC TGGTGCCG GTGGAGGCGG chrX:21473271-21473391 109 3.56e-04 TTGTTGTCAT TGTTGGCG CTGC chr3R:15246186-15246306 72 3.92e-04 GAGCGGCTGG TGCCGCTG GCGCTGCCGG chr3R:12975362-12975482 10 4.08e-04 ATATGGGGC TGGTGCTA AACACCCCCC chr3R:18195434-18195554 113 4.26e-04 AGGGCGTACA TGCTGTCG chr2R:19183230-19183350 21 4.57e-04 tgtgtgtgtg tgttggta gtgggcgtgg chrX:8185049-8185169 28 5.38e-04 gggggggggg tggtggTG CACATTTCCG chr2R:15658717-15658837 8 5.38e-04 CGCCGGA TGGTGGTG CGGATGATGG chr2L:21689507-21689627 95 5.38e-04 aaaatatgta tgttgata tttcttcaca chrX:9093201-9093321 20 5.38e-04 tttgccaaaa tgttgata ttttcaaacg chr3R:23920526-23920646 6 5.38e-04 gatga tgatgttg ctgctgctgc chr3L:888511-888631 104 5.38e-04 acatcacctg tggtggtg tcgccaaaa chr2R:7046904-7047024 26 6.04e-04 tgctgaccca tgctgcca cgcccactct chr3L:9262407-9262527 38 6.04e-04 ATACATTTAA TGCTGCCA GCTACCGCTT chr2R:21163328-21163448 46 7.43e-04 ACCTGGTCCC TGCTGACG TCCGCCCGGA chr3R:13873523-13873643 28 7.90e-04 ttgctgctgg tgatgatg AGCCAGTGCA chr3L:21436212-21436332 8 8.24e-04 GGACGAA TGCCGTTG gcggcgcacc chr2R:4676956-4677076 1 8.90e-04 . tgcttctg tccgcacttc chr2R:22466608-22466728 62 8.90e-04 TTTCCCTTTG TGCCGCCG CAACAGTTCA chr3L:10585077-10585197 112 8.90e-04 aacagcaaca tgccgccg t -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:14027717-14027837 1.7e-05 77_[+4]_35 chr3L:14024842-14024962 1.7e-05 1_[+4]_111 chrX:6693639-6693759 1.7e-05 78_[+4]_34 chr3R:16827730-16827850 1.7e-05 95_[+4]_17 chr2R:24333540-24333660 1.7e-05 54_[+4]_58 chr3R:8167213-8167333 1.7e-05 52_[+4]_60 chr3L:2789555-2789675 1.7e-05 51_[+4]_61 chr3L:7764888-7765008 1.7e-05 21_[+4]_91 chrX:7714031-7714151 1.7e-05 21_[+4]_91 chr3L:21549993-21550113 1.7e-05 65_[+4]_47 chr2R:21221402-21221522 1.7e-05 1_[+4]_111 chr2R:10233930-10234050 1.7e-05 76_[+4]_36 chrX:7686210-7686330 1.7e-05 62_[+4]_50 chr2R:11645676-11645796 1.7e-05 29_[+4]_83 chr2L:241554-241674 1.7e-05 31_[+4]_81 chrX:17940816-17940936 1.7e-05 22_[+4]_90 chr3R:9232499-9232619 1.7e-05 46_[+4]_66 chr3R:7275112-7275232 1.7e-05 76_[+4]_36 chrX:12715083-12715203 1.7e-05 9_[+4]_103 chr2L:16808891-16809011 1.7e-05 45_[+4]_67 chr3L:16141695-16141815 1.7e-05 46_[+4]_66 chrX:21333274-21333394 1.7e-05 82_[+4]_30 chr2L:3605812-3605932 1.7e-05 43_[+4]_69 chrX:10607768-10607888 1.7e-05 84_[+4]_28 chr2L:5320206-5320326 1.7e-05 91_[+4]_21 chr2L:18546565-18546685 1.7e-05 48_[+4]_64 chr3L:13430310-13430430 1.7e-05 1_[+4]_111 chr2R:9772203-9772323 1.7e-05 52_[+4]_60 chr3L:9840849-9840969 1.7e-05 79_[+4]_33 chr2R:20958667-20958787 1.7e-05 42_[+4]_70 chrX:5080660-5080780 1.7e-05 11_[+4]_101 chr3L:6750977-6751097 1.7e-05 80_[+4]_32 chrX:12831462-12831582 1.7e-05 105_[+4]_7 chr2R:18281210-18281330 1.7e-05 57_[+4]_55 chr2R:13396574-13396694 1.7e-05 57_[+4]_55 chr3R:30878263-30878383 1.7e-05 13_[+4]_99 chr3L:2871319-2871439 1.7e-05 17_[+4]_95 chr2L:5321143-5321263 1.7e-05 63_[+4]_49 chr3L:8437753-8437873 1.7e-05 25_[+4]_87 chr3L:8369930-8370050 3.5e-05 40_[+4]_72 chr3R:20820181-20820301 3.5e-05 24_[+4]_88 chr3L:7161449-7161569 3.5e-05 97_[+4]_15 chr2R:7740521-7740641 3.5e-05 11_[+4]_101 chr2L:17437733-17437853 3.5e-05 1_[+4]_111 chr3R:17905279-17905399 3.5e-05 26_[+4]_86 chrX:7689031-7689151 5e-05 53_[+4]_59 chr2L:20953203-20953323 5e-05 55_[+4]_57 chr3L:11542576-11542696 5e-05 22_[+4]_90 chrX:10618630-10618750 5e-05 111_[+4]_1 chr3L:17077412-17077532 5e-05 61_[+4]_51 chr3L:17663786-17663906 5e-05 36_[+4]_76 chr3L:20192014-20192134 5e-05 64_[+4]_48 chrX:3472614-3472734 6.8e-05 42_[+4]_70 chr2R:5154278-5154398 6.8e-05 84_[+4]_28 chr2R:21583187-21583307 6.8e-05 13_[+4]_99 chr3L:14125755-14125875 0.0001 57_[+4]_55 chr3R:14578248-14578368 0.0001 97_[+4]_15 chrX:1715013-1715133 0.00012 7_[+4]_105 chr3L:2328943-2329063 0.00013 53_[+4]_59 chr3L:14025848-14025968 0.00015 47_[+4]_65 chr3R:5877506-5877626 0.00015 99_[+4]_13 chr2R:10990095-10990215 0.00017 20_[+4]_92 chr2L:9994539-9994659 0.00017 96_[+4]_16 chr2R:13327309-13327429 0.00019 26_[+4]_86 chr2L:20690219-20690339 0.0002 1_[+4]_111 chr2L:21383675-21383795 0.00027 68_[+4]_44 chr2R:17075625-17075745 0.00027 56_[+4]_56 chr3L:22063348-22063468 0.00032 53_[+4]_59 chr2L:22163441-22163561 0.00032 32_[+4]_80 chr2R:1595434-1595554 0.00032 19_[+4]_93 chr3R:18422611-18422731 0.00032 60_[+4]_52 chr3R:9744154-9744274 0.00034 31_[+4]_81 chrX:21473271-21473391 0.00036 108_[+4]_4 chr3R:15246186-15246306 0.00039 71_[+4]_41 chr3R:12975362-12975482 0.00041 9_[+4]_103 chr3R:18195434-18195554 0.00043 112_[+4] chr2R:19183230-19183350 0.00046 20_[+4]_92 chrX:8185049-8185169 0.00054 27_[+4]_85 chr2R:15658717-15658837 0.00054 7_[+4]_105 chr2L:21689507-21689627 0.00054 94_[+4]_18 chrX:9093201-9093321 0.00054 19_[+4]_93 chr3R:23920526-23920646 0.00054 5_[+4]_107 chr3L:888511-888631 0.00054 103_[+4]_9 chr2R:7046904-7047024 0.0006 25_[+4]_87 chr3L:9262407-9262527 0.0006 37_[+4]_75 chr2R:21163328-21163448 0.00074 45_[+4]_67 chr3R:13873523-13873643 0.00079 27_[+4]_85 chr3L:21436212-21436332 0.00082 7_[+4]_105 chr2R:4676956-4677076 0.00089 [+4]_112 chr2R:22466608-22466728 0.00089 61_[+4]_51 chr3L:10585077-10585197 0.00089 111_[+4]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTTGCTG width=8 seqs=91 chr3L:14027717-14027837 ( 78) TGTTGCTG 1 chr3L:14024842-14024962 ( 2) TGTTGCTG 1 chrX:6693639-6693759 ( 79) TGTTGCTG 1 chr3R:16827730-16827850 ( 96) TGTTGCTG 1 chr2R:24333540-24333660 ( 55) TGTTGCTG 1 chr3R:8167213-8167333 ( 53) TGTTGCTG 1 chr3L:2789555-2789675 ( 52) TGTTGCTG 1 chr3L:7764888-7765008 ( 22) TGTTGCTG 1 chrX:7714031-7714151 ( 22) TGTTGCTG 1 chr3L:21549993-21550113 ( 66) TGTTGCTG 1 chr2R:21221402-21221522 ( 2) TGTTGCTG 1 chr2R:10233930-10234050 ( 77) TGTTGCTG 1 chrX:7686210-7686330 ( 63) TGTTGCTG 1 chr2R:11645676-11645796 ( 30) TGTTGCTG 1 chr2L:241554-241674 ( 32) TGTTGCTG 1 chrX:17940816-17940936 ( 23) TGTTGCTG 1 chr3R:9232499-9232619 ( 47) TGTTGCTG 1 chr3R:7275112-7275232 ( 77) TGTTGCTG 1 chrX:12715083-12715203 ( 10) TGTTGCTG 1 chr2L:16808891-16809011 ( 46) TGTTGCTG 1 chr3L:16141695-16141815 ( 47) TGTTGCTG 1 chrX:21333274-21333394 ( 83) TGTTGCTG 1 chr2L:3605812-3605932 ( 44) TGTTGCTG 1 chrX:10607768-10607888 ( 85) TGTTGCTG 1 chr2L:5320206-5320326 ( 92) TGTTGCTG 1 chr2L:18546565-18546685 ( 49) TGTTGCTG 1 chr3L:13430310-13430430 ( 2) TGTTGCTG 1 chr2R:9772203-9772323 ( 53) TGTTGCTG 1 chr3L:9840849-9840969 ( 80) TGTTGCTG 1 chr2R:20958667-20958787 ( 43) TGTTGCTG 1 chrX:5080660-5080780 ( 12) TGTTGCTG 1 chr3L:6750977-6751097 ( 81) TGTTGCTG 1 chrX:12831462-12831582 ( 106) TGTTGCTG 1 chr2R:18281210-18281330 ( 58) TGTTGCTG 1 chr2R:13396574-13396694 ( 58) TGTTGCTG 1 chr3R:30878263-30878383 ( 14) TGTTGCTG 1 chr3L:2871319-2871439 ( 18) TGTTGCTG 1 chr2L:5321143-5321263 ( 64) TGTTGCTG 1 chr3L:8437753-8437873 ( 26) TGTTGCTG 1 chr3L:8369930-8370050 ( 41) TGCTGCTG 1 chr3R:20820181-20820301 ( 25) TGCTGCTG 1 chr3L:7161449-7161569 ( 98) TGCTGCTG 1 chr2R:7740521-7740641 ( 12) TGCTGCTG 1 chr2L:17437733-17437853 ( 2) TGCTGCTG 1 chr3R:17905279-17905399 ( 27) TGCTGCTG 1 chrX:7689031-7689151 ( 54) TGTTGTTG 1 chr2L:20953203-20953323 ( 56) TGTTGTTG 1 chr3L:11542576-11542696 ( 23) TGTTGTTG 1 chrX:10618630-10618750 ( 112) TGTTGTTG 1 chr3L:17077412-17077532 ( 62) TGTTGTTG 1 chr3L:17663786-17663906 ( 37) TGTTGTTG 1 chr3L:20192014-20192134 ( 65) TGTTGTTG 1 chrX:3472614-3472734 ( 43) TGTTGCCG 1 chr2R:5154278-5154398 ( 85) TGTTGCCG 1 chr2R:21583187-21583307 ( 14) TGTTGCCG 1 chr3L:14125755-14125875 ( 58) TGGTGCTG 1 chr3R:14578248-14578368 ( 98) TGGTGCTG 1 chrX:1715013-1715133 ( 8) TGTTGGTG 1 chr3L:2328943-2329063 ( 54) TGTTGATG 1 chr3L:14025848-14025968 ( 48) TGCTGTTG 1 chr3R:5877506-5877626 ( 100) TGCTGTTG 1 chr2R:10990095-10990215 ( 21) TGCTGCCG 1 chr2L:9994539-9994659 ( 97) TGCTGCCG 1 chr2R:13327309-13327429 ( 27) TGTCGCTG 1 chr2L:20690219-20690339 ( 2) TGATGCTG 1 chr2L:21383675-21383795 ( 69) TGTTGTTA 1 chr2R:17075625-17075745 ( 57) TGCTGGTG 1 chr3L:22063348-22063468 ( 54) TGTTGCCA 1 chr2L:22163441-22163561 ( 33) TGTTGCCA 1 chr2R:1595434-1595554 ( 20) TGTTGCCA 1 chr3R:18422611-18422731 ( 61) TGGTGTTG 1 chr3R:9744154-9744274 ( 32) TGGTGCCG 1 chrX:21473271-21473391 ( 109) TGTTGGCG 1 chr3R:15246186-15246306 ( 72) TGCCGCTG 1 chr3R:12975362-12975482 ( 10) TGGTGCTA 1 chr3R:18195434-18195554 ( 113) TGCTGTCG 1 chr2R:19183230-19183350 ( 21) TGTTGGTA 1 chrX:8185049-8185169 ( 28) TGGTGGTG 1 chr2R:15658717-15658837 ( 8) TGGTGGTG 1 chr2L:21689507-21689627 ( 95) TGTTGATA 1 chrX:9093201-9093321 ( 20) TGTTGATA 1 chr3R:23920526-23920646 ( 6) TGATGTTG 1 chr3L:888511-888631 ( 104) TGGTGGTG 1 chr2R:7046904-7047024 ( 26) TGCTGCCA 1 chr3L:9262407-9262527 ( 38) TGCTGCCA 1 chr2R:21163328-21163448 ( 46) TGCTGACG 1 chr3R:13873523-13873643 ( 28) TGATGATG 1 chr3L:21436212-21436332 ( 8) TGCCGTTG 1 chr2R:4676956-4677076 ( 1) TGCTTCTG 1 chr2R:22466608-22466728 ( 62) TGCCGCCG 1 chr3L:10585077-10585197 ( 112) TGCCGCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.66555 E= 1.5e-042 -1315 -1315 -1315 207 -1315 -1315 188 -1315 -280 -24 -163 147 -1315 -224 -1315 199 -1315 -1315 187 -443 -207 146 -182 -63 -1315 -57 -1315 179 -107 -1315 171 -1315 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 91 E= 1.5e-042 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.032967 0.219780 0.087912 0.659341 0.000000 0.054945 0.000000 0.945055 0.000000 0.000000 0.989011 0.010989 0.054945 0.714286 0.076923 0.153846 0.000000 0.175824 0.000000 0.824176 0.109890 0.000000 0.890110 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTGCTG MEME-4 regular expression -------------------------------------------------------------------------------- TG[TC]TGCTG -------------------------------------------------------------------------------- Time 24.88 secs. ******************************************************************************** ******************************************************************************** MOTIF GCAACARC MEME-5 width = 8 sites = 51 llr = 492 E-value = 1.1e-038 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 2:aa:a3: pos.-specific C :a::a::a probability G 8:::::6: matrix T ::::::1: bits 2.1 * * 1.9 ***** * 1.7 ***** * 1.5 ***** * Relative 1.3 ****** * Entropy 1.1 ****** * (13.9 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCAACAGC consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:26085744-26085864 26 1.57e-05 aatcaccacg gcaacagc aacagcagca chr3L:10870189-10870309 71 1.57e-05 agcaacagca gcaacagc agcagcagca chr3R:15399124-15399244 33 1.57e-05 agcagcaaca gcaacagc agcagcagca chrX:6917748-6917868 84 1.57e-05 agctgcaaca gcaacagc agcagcagca chr3R:31660976-31661096 39 1.57e-05 CCTCCTTgca gcaacagc agcagcagca chr3R:24716815-24716935 84 1.57e-05 tgcagcagca gcaacagc agttgcagca chr3R:18011470-18011590 57 1.57e-05 tgcagcaact gcaacagc agatgcacct chr3L:16851705-16851825 64 1.57e-05 agcagcaaaa gcaacagc agcaaagtct chr3R:22602922-22603042 3 1.57e-05 ca gcaacagc aagagcagca chr3R:28237936-28238056 99 1.57e-05 agcagcaaca gcaacagc agcagcaggt chr3R:11375281-11375401 70 1.57e-05 aggaggagca gcaacagc agatccagcg chr3L:9471411-9471531 55 1.57e-05 cacagcacca gcaacagc agcacctgca chrX:9694792-9694912 70 1.57e-05 acttgacaca gcaacagc agcagcagca chr2L:17402632-17402752 31 1.57e-05 catagcagca gcaacagc agcagcagca chr3L:11604339-11604459 106 1.57e-05 agcagcagca gcaacagc agcaAAT chr2R:11208466-11208586 90 1.57e-05 agcaacagag gcaacagc atcagcatca chr3R:31370334-31370454 51 1.57e-05 TTTGGTTgca gcaacagc agcagcagca chr3L:6947711-6947831 94 1.57e-05 accagcagca gcaacagc aatacctgct chr2R:10612127-10612247 107 1.57e-05 agcagcaaca gcaacagc aacagc chr3R:12301667-12301787 49 1.57e-05 GACCCcaaca gcaacagc aactgcgact chr3R:20011081-20011201 66 1.57e-05 agctgcagca gcaacagc aacaacaaca chrX:6716309-6716429 34 1.57e-05 agcaACAGGA GCAACAGC AACGCcagca chr3L:15605103-15605223 38 1.57e-05 agcagaagga gcaacagc atcagcagca chr3L:4590190-4590310 27 1.57e-05 tggggcagca gcaacagc cgcagtacca chr3R:19524625-19524745 35 1.57e-05 TTGCgcaacg gcaacagc aacatcaaca chr3L:9708951-9709071 112 1.57e-05 accaacagca gcaacagc a chr3L:888511-888631 84 1.57e-05 agcagcatca gcaacagc aaacatcacc chr3R:30109542-30109662 99 2.90e-05 agcagcagca gcaacaac agcagcagca chrX:12708445-12708565 31 2.90e-05 aacaacagca gcaacaac aacagcagca chr3L:7890105-7890225 92 2.90e-05 agcagcagca gcaacaac aacatcaact chr3R:29767353-29767473 31 2.90e-05 tctagtgccc gcaacaac atcccaatcc chr3L:21230901-21231021 105 2.90e-05 aacggcagca gcaacaac aacaacgg chr3L:3150589-3150709 87 2.90e-05 cgcagcagca gcaacaac agcagcagca chr2L:9994539-9994659 71 2.90e-05 AGATGATGAT GCAACAAC AGCAGCAACA chr3L:10585077-10585197 43 2.90e-05 aggccgtgca gcaacaac aggcggtcca chr2R:18746006-18746126 110 2.90e-05 cactacagcg gcaacaac aac chr2R:14508769-14508889 111 2.90e-05 agcagcagca gcaacaac tg chr3R:19040824-19040944 97 2.90e-05 aacaccaaca gcaacaac atcagcaaca chr2L:13498064-13498184 23 4.24e-05 TGCCAAACGT ACAACAGC CACAACTGCC chr2R:14040277-14040397 46 4.24e-05 accatcaaca acaacagc agcagcagca chr2R:11810733-11810853 113 4.24e-05 cggcagcagc acaacagc chr2L:12129115-12129235 59 5.37e-05 GGGGCTTGCC ACAACAAC GGGGAGCACT chr3L:7624700-7624820 6 5.37e-05 cagAA ACAACAAC CCGCCCAACA chr2L:11236503-11236623 33 5.37e-05 agcagcagcc acaacaac agcagcagca chr3L:2442469-2442589 39 5.37e-05 cacagcacca acaacaac tgcaacgcgc chr3R:30360828-30360948 33 5.37e-05 aacagtcaca acaacaac agcagcagca chr3L:12329688-12329808 60 6.75e-05 ACCCCCACCA GCAACATC AGCAACACCA chr3L:4729944-4730064 55 6.75e-05 agcagcagca gcaacatc aacagcagca chr2L:17973138-17973258 24 8.60e-05 ATcagcacca gcagcagc aacagcagca chr3R:9895315-9895435 3 9.77e-05 TG ACAACATC AGGCAAGTAA chr3R:29695883-29696003 64 1.29e-04 agcagcagca acagcagc agcagcagca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:26085744-26085864 1.6e-05 25_[+5]_87 chr3L:10870189-10870309 1.6e-05 70_[+5]_42 chr3R:15399124-15399244 1.6e-05 32_[+5]_80 chrX:6917748-6917868 1.6e-05 83_[+5]_29 chr3R:31660976-31661096 1.6e-05 38_[+5]_74 chr3R:24716815-24716935 1.6e-05 83_[+5]_29 chr3R:18011470-18011590 1.6e-05 56_[+5]_56 chr3L:16851705-16851825 1.6e-05 63_[+5]_49 chr3R:22602922-22603042 1.6e-05 2_[+5]_110 chr3R:28237936-28238056 1.6e-05 98_[+5]_14 chr3R:11375281-11375401 1.6e-05 69_[+5]_43 chr3L:9471411-9471531 1.6e-05 54_[+5]_58 chrX:9694792-9694912 1.6e-05 69_[+5]_43 chr2L:17402632-17402752 1.6e-05 30_[+5]_82 chr3L:11604339-11604459 1.6e-05 105_[+5]_7 chr2R:11208466-11208586 1.6e-05 89_[+5]_23 chr3R:31370334-31370454 1.6e-05 50_[+5]_62 chr3L:6947711-6947831 1.6e-05 93_[+5]_19 chr2R:10612127-10612247 1.6e-05 106_[+5]_6 chr3R:12301667-12301787 1.6e-05 48_[+5]_64 chr3R:20011081-20011201 1.6e-05 65_[+5]_47 chrX:6716309-6716429 1.6e-05 33_[+5]_79 chr3L:15605103-15605223 1.6e-05 37_[+5]_75 chr3L:4590190-4590310 1.6e-05 26_[+5]_86 chr3R:19524625-19524745 1.6e-05 34_[+5]_78 chr3L:9708951-9709071 1.6e-05 111_[+5]_1 chr3L:888511-888631 1.6e-05 83_[+5]_29 chr3R:30109542-30109662 2.9e-05 98_[+5]_14 chrX:12708445-12708565 2.9e-05 30_[+5]_82 chr3L:7890105-7890225 2.9e-05 91_[+5]_21 chr3R:29767353-29767473 2.9e-05 30_[+5]_82 chr3L:21230901-21231021 2.9e-05 104_[+5]_8 chr3L:3150589-3150709 2.9e-05 86_[+5]_26 chr2L:9994539-9994659 2.9e-05 70_[+5]_42 chr3L:10585077-10585197 2.9e-05 42_[+5]_70 chr2R:18746006-18746126 2.9e-05 109_[+5]_3 chr2R:14508769-14508889 2.9e-05 110_[+5]_2 chr3R:19040824-19040944 2.9e-05 96_[+5]_16 chr2L:13498064-13498184 4.2e-05 22_[+5]_90 chr2R:14040277-14040397 4.2e-05 45_[+5]_67 chr2R:11810733-11810853 4.2e-05 112_[+5] chr2L:12129115-12129235 5.4e-05 58_[+5]_54 chr3L:7624700-7624820 5.4e-05 5_[+5]_107 chr2L:11236503-11236623 5.4e-05 32_[+5]_80 chr3L:2442469-2442589 5.4e-05 38_[+5]_74 chr3R:30360828-30360948 5.4e-05 32_[+5]_80 chr3L:12329688-12329808 6.7e-05 59_[+5]_53 chr3L:4729944-4730064 6.7e-05 54_[+5]_58 chr2L:17973138-17973258 8.6e-05 23_[+5]_89 chr3R:9895315-9895435 9.8e-05 2_[+5]_110 chr3R:29695883-29696003 0.00013 63_[+5]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCAACARC width=8 seqs=51 chr3R:26085744-26085864 ( 26) GCAACAGC 1 chr3L:10870189-10870309 ( 71) GCAACAGC 1 chr3R:15399124-15399244 ( 33) GCAACAGC 1 chrX:6917748-6917868 ( 84) GCAACAGC 1 chr3R:31660976-31661096 ( 39) GCAACAGC 1 chr3R:24716815-24716935 ( 84) GCAACAGC 1 chr3R:18011470-18011590 ( 57) GCAACAGC 1 chr3L:16851705-16851825 ( 64) GCAACAGC 1 chr3R:22602922-22603042 ( 3) GCAACAGC 1 chr3R:28237936-28238056 ( 99) GCAACAGC 1 chr3R:11375281-11375401 ( 70) GCAACAGC 1 chr3L:9471411-9471531 ( 55) GCAACAGC 1 chrX:9694792-9694912 ( 70) GCAACAGC 1 chr2L:17402632-17402752 ( 31) GCAACAGC 1 chr3L:11604339-11604459 ( 106) GCAACAGC 1 chr2R:11208466-11208586 ( 90) GCAACAGC 1 chr3R:31370334-31370454 ( 51) GCAACAGC 1 chr3L:6947711-6947831 ( 94) GCAACAGC 1 chr2R:10612127-10612247 ( 107) GCAACAGC 1 chr3R:12301667-12301787 ( 49) GCAACAGC 1 chr3R:20011081-20011201 ( 66) GCAACAGC 1 chrX:6716309-6716429 ( 34) GCAACAGC 1 chr3L:15605103-15605223 ( 38) GCAACAGC 1 chr3L:4590190-4590310 ( 27) GCAACAGC 1 chr3R:19524625-19524745 ( 35) GCAACAGC 1 chr3L:9708951-9709071 ( 112) GCAACAGC 1 chr3L:888511-888631 ( 84) GCAACAGC 1 chr3R:30109542-30109662 ( 99) GCAACAAC 1 chrX:12708445-12708565 ( 31) GCAACAAC 1 chr3L:7890105-7890225 ( 92) GCAACAAC 1 chr3R:29767353-29767473 ( 31) GCAACAAC 1 chr3L:21230901-21231021 ( 105) GCAACAAC 1 chr3L:3150589-3150709 ( 87) GCAACAAC 1 chr2L:9994539-9994659 ( 71) GCAACAAC 1 chr3L:10585077-10585197 ( 43) GCAACAAC 1 chr2R:18746006-18746126 ( 110) GCAACAAC 1 chr2R:14508769-14508889 ( 111) GCAACAAC 1 chr3R:19040824-19040944 ( 97) GCAACAAC 1 chr2L:13498064-13498184 ( 23) ACAACAGC 1 chr2R:14040277-14040397 ( 46) ACAACAGC 1 chr2R:11810733-11810853 ( 113) ACAACAGC 1 chr2L:12129115-12129235 ( 59) ACAACAAC 1 chr3L:7624700-7624820 ( 6) ACAACAAC 1 chr2L:11236503-11236623 ( 33) ACAACAAC 1 chr3L:2442469-2442589 ( 39) ACAACAAC 1 chr3R:30360828-30360948 ( 33) ACAACAAC 1 chr3L:12329688-12329808 ( 60) GCAACATC 1 chr3L:4729944-4730064 ( 55) GCAACATC 1 chr2L:17973138-17973258 ( 24) GCAGCAGC 1 chr3R:9895315-9895435 ( 3) ACAACATC 1 chr3R:29695883-29696003 ( 64) ACAGCAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.0411 E= 1.1e-038 -23 -1232 157 -1232 -1232 194 -1232 -1232 212 -1232 -1232 -1232 206 -1232 -279 -1232 -1232 194 -1232 -1232 212 -1232 -1232 -1232 45 -1232 121 -202 -1232 194 -1232 -1232 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 51 E= 1.1e-038 0.196078 0.000000 0.803922 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.960784 0.000000 0.039216 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.313725 0.000000 0.627451 0.058824 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAACARC MEME-5 regular expression -------------------------------------------------------------------------------- GCAACA[GA]C -------------------------------------------------------------------------------- Time 30.34 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:31765284-31765404 6.65e-01 120 chr3R:9744154-9744274 1.21e-01 120 chr3L:8437753-8437873 3.09e-07 1_[+4(4.99e-05)]_1_[+4(1.66e-05)]_7_\ [+4(1.66e-05)]_4_[+4(4.99e-05)]_1_[+4(1.66e-05)]_1_[+4(3.47e-05)]_4_\ [+4(1.66e-05)]_31_[+4(1.66e-05)]_6 chr3R:18422611-18422731 2.22e-07 45_[+3(1.81e-05)]_34_[+3(1.81e-05)]_\ 16_[+4(4.99e-05)]_1 chr2R:21164430-21164550 9.93e-01 120 chr3R:31577490-31577610 9.73e-01 120 chr3R:19040824-19040944 1.68e-05 30_[+5(1.57e-05)]_4_[+5(1.57e-05)]_\ 4_[+5(2.90e-05)]_19_[+5(5.37e-05)]_7_[+5(2.90e-05)]_16 chrX:17218691-17218811 5.28e-01 120 chr3L:20192014-20192134 1.28e-02 13_[+4(4.99e-05)]_1_[+4(4.99e-05)]_\ 1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_25_\ [+4(4.99e-05)]_21 chr3L:888511-888631 5.07e-07 56_[+5(1.57e-05)]_4_[+1(3.90e-05)]_\ 7_[+5(1.57e-05)]_29 chr2R:24327079-24327199 8.60e-01 120 chr3R:18195434-18195554 4.92e-01 120 chr3R:5176083-5176203 8.64e-08 9_[+3(1.81e-05)]_70_[+4(1.66e-05)]_\ 4_[+3(1.81e-05)]_13 chr2L:5321143-5321263 8.64e-08 3_[+4(4.99e-05)]_1_[+3(3.57e-05)]_7_\ [+4(1.66e-05)]_13_[+4(1.66e-05)]_7_[+4(1.66e-05)]_20_[+1(9.48e-05)]_3_\ [+4(1.66e-05)]_1_[+4(3.47e-05)]_1 chr3L:9708951-9709071 1.68e-05 12_[+1(7.66e-05)]_1_[+1(7.66e-05)]_\ 4_[+5(5.37e-05)]_7_[+5(6.75e-05)]_7_[+5(6.75e-05)]_1_[+1(7.66e-05)]_10_\ [+5(4.24e-05)]_13_[+5(1.57e-05)]_1 chr3L:2871319-2871439 3.09e-07 11_[+4(1.66e-05)]_1_[+3(1.81e-05)]_\ 10_[+4(1.66e-05)]_25_[+3(1.81e-05)]_1_[+3(1.81e-05)]_4_[+4(1.66e-05)]_4_\ [+3(1.81e-05)]_8 chr2L:8659688-8659808 1.04e-04 7_[+5(2.90e-05)]_84_[+4(4.99e-05)]_\ 13 chr3L:19844646-19844766 1.08e-03 120 chr3R:30878263-30878383 3.03e-07 1_[+4(1.66e-05)]_4_[+4(1.66e-05)]_\ 34_[+4(1.66e-05)]_1_[+4(3.47e-05)]_4_[+3(1.81e-05)]_10_[+4(1.66e-05)]_4_\ [+3(1.81e-05)]_6 chr2R:13396574-13396694 3.09e-07 [+4(4.99e-05)]_13_[+4(1.66e-05)]_1_\ [+4(1.66e-05)]_1_[+4(1.66e-05)]_1_[+4(1.66e-05)]_1_[+4(1.66e-05)]_1_\ [+4(1.66e-05)]_8_[+1(1.98e-05)]_6_[+3(1.81e-05)]_7_[+4(1.66e-05)]_1 chr2R:23349975-23350095 3.50e-02 120 chr2R:15591184-15591304 3.34e-01 120 chr2L:1253374-1253494 8.91e-01 120 chr2R:14712934-14713054 8.56e-01 120 chr2R:18281210-18281330 3.03e-07 3_[+4(1.66e-05)]_1_[+4(3.47e-05)]_1_\ [+4(1.66e-05)]_1_[+4(3.47e-05)]_4_[+4(1.66e-05)]_7_[+4(1.66e-05)]_7_\ [+3(1.81e-05)]_16_[+3(1.81e-05)]_7_[+3(1.81e-05)]_1 chrX:12831462-12831582 3.03e-07 44_[+3(1.81e-05)]_5_[+4(1.66e-05)]_\ 4_[+3(1.81e-05)]_7_[+3(5.32e-05)]_1_[+3(1.81e-05)]_4_[+4(1.66e-05)]_7 chr3R:19524625-19524745 1.65e-05 34_[+5(1.57e-05)]_43_[+5(1.57e-05)]_\ 4_[+1(7.66e-05)]_15 chr2R:21163328-21163448 1.73e-01 120 chr3L:17663786-17663906 8.64e-08 39_[+4(1.66e-05)]_1_[+4(3.47e-05)]_\ 1_[+4(1.66e-05)]_14_[+1(1.98e-05)]_6_[+3(8.77e-05)]_1_[+3(3.57e-05)]_10 chr3L:17077412-17077532 8.64e-08 28_[+3(3.57e-05)]_10_[+4(1.66e-05)]_\ 1_[+4(3.47e-05)]_4_[+4(1.66e-05)]_1_[+4(3.47e-05)]_1_[+3(1.81e-05)]_27 chr3R:12185754-12185874 3.59e-01 120 chr3L:6750977-6751097 2.65e-07 8_[+4(1.66e-05)]_37_[+3(1.81e-05)]_\ 19_[+4(1.66e-05)]_7_[+3(1.81e-05)]_7_[+4(4.99e-05)]_2 chr2L:7025422-7025542 9.95e-08 102_[+3(1.81e-05)]_1_[+4(1.66e-05)]_\ 1 chr3R:12975362-12975482 1.69e-04 75_[+3(1.81e-05)]_37 chr3R:29362549-29362669 9.61e-01 120 chrX:7662564-7662684 6.55e-05 94_[+1(7.66e-05)]_18 chr3R:23920526-23920646 6.58e-08 8_[+4(1.66e-05)]_1_[+4(3.47e-05)]_\ 43_[+4(1.66e-05)]_16_[+4(1.66e-05)]_20 chr2R:11810733-11810853 3.66e-05 32_[+1(7.66e-05)]_64_[+1(7.66e-05)]_\ [+5(4.24e-05)] chr3L:4590190-4590310 1.67e-05 5_[+1(7.66e-05)]_13_[+5(1.57e-05)]_\ 16_[+1(7.66e-05)]_1_[+1(7.66e-05)]_16_[+5(2.90e-05)]_1_[+1(7.66e-05)]_1_\ [+5(1.57e-05)]_1_[+1(7.66e-05)]_2 chr3R:17905279-17905399 1.92e-07 26_[+3(1.81e-05)]_4_[+4(1.66e-05)]_\ 4_[+3(1.81e-05)]_28_[+4(1.66e-05)]_4_[+3(1.81e-05)]_14 chrX:5080660-5080780 8.64e-08 2_[+3(5.32e-05)]_1_[+4(1.66e-05)]_\ 11_[+1(5.81e-05)]_3_[+3(1.81e-05)]_15_[+4(1.66e-05)]_36_[+4(1.66e-05)]_4 chr3L:21718372-21718492 4.30e-07 24_[+3(1.81e-05)]_88 chr3R:5877506-5877626 3.03e-07 53_[+4(1.66e-05)]_2_[+3(3.57e-05)]_\ 1_[+4(1.66e-05)]_16_[+4(1.66e-05)]_16 chr3L:27069265-27069385 9.22e-01 120 chr2R:20958667-20958787 2.24e-07 12_[+4(1.66e-05)]_4_[+3(1.81e-05)]_\ 10_[+4(1.66e-05)]_7_[+3(1.81e-05)]_1_[+3(1.81e-05)]_29_[+3(1.81e-05)]_9 chr2L:5821069-5821189 3.63e-02 120 chr3R:30360828-30360948 2.99e-05 14_[+5(5.37e-05)]_7_[+5(5.37e-05)]_\ 4_[+1(7.66e-05)]_7_[+5(6.75e-05)]_56 chr2L:17437733-17437853 2.24e-07 1_[+3(1.81e-05)]_1_[+3(1.81e-05)]_\ 70_[+4(1.66e-05)]_1_[+3(1.81e-05)]_15 chr3L:9840849-9840969 8.64e-08 64_[+3(1.81e-05)]_7_[+4(1.66e-05)]_\ 1_[+3(1.81e-05)]_1_[+4(1.66e-05)]_15 chr2R:9772203-9772323 7.25e-08 5_[+3(1.81e-05)]_1_[+3(1.81e-05)]_\ 30_[+4(1.66e-05)]_8_[+3(1.81e-05)]_1_[+3(5.32e-05)]_1_[+4(1.66e-05)]_26 chr2R:13327309-13327429 2.78e-02 120 chr2R:6898342-6898462 4.67e-01 120 chr2L:21622329-21622449 9.94e-01 120 chr3L:2442469-2442589 1.68e-05 38_[+5(5.37e-05)]_16_[+5(1.57e-05)]_\ 1_[+5(6.75e-05)]_4_[+5(2.90e-05)]_10_[+5(1.57e-05)]_1_[+5(8.60e-05)]_2 chrX:13530528-13530648 2.63e-01 120 chr3L:13430310-13430430 1.84e-07 1_[+4(1.66e-05)]_32_[+4(6.81e-05)]_\ 24_[+3(1.81e-05)]_7_[+3(1.81e-05)]_1_[+4(1.66e-05)]_15 chr3L:15605103-15605223 1.52e-05 37_[+5(1.57e-05)]_4_[+1(7.66e-05)]_\ 13_[+5(1.57e-05)]_42 chrX:6716309-6716429 1.67e-05 [+5(1.57e-05)]_1_[+5(8.60e-05)]_16_\ [+5(1.57e-05)]_28_[+5(1.57e-05)]_43 chrX:10618630-10618750 3.89e-06 78_[+4(1.66e-05)]_5_[+1(1.98e-05)]_\ 12_[+4(4.99e-05)]_1 chr3R:20011081-20011201 2.65e-06 11_[+5(1.57e-05)]_10_[+1(7.66e-05)]_\ 19_[+1(3.90e-05)]_1_[+5(1.57e-05)]_7_[+5(4.24e-05)]_32 chr2R:14508769-14508889 2.67e-05 89_[+5(6.75e-05)]_1_[+1(7.66e-05)]_\ 4_[+5(2.90e-05)]_2 chr2R:22363343-22363463 9.88e-01 120 chr2L:20057530-20057650 2.21e-01 120 chr2R:18746006-18746126 9.46e-07 5_[+5(6.75e-05)]_[+3(3.57e-05)]_8_\ [+5(1.57e-05)]_31_[+1(3.90e-05)]_33_[+5(2.90e-05)]_3 chr3R:12301667-12301787 1.15e-05 48_[+5(1.57e-05)]_16_[+5(1.57e-05)]_\ 16_[+5(1.57e-05)]_6_[+5(2.90e-05)]_2 chrX:4358654-4358774 4.03e-02 120 chr2R:19159838-19159958 5.54e-05 106_[+1(7.66e-05)]_6 chr2R:14040277-14040397 1.06e-05 12_[+5(1.57e-05)]_1_[+5(8.60e-05)]_\ 13_[+5(5.37e-05)]_1_[+1(7.66e-05)]_37_[+5(4.24e-05)]_16 chr2R:19183230-19183350 5.24e-02 120 chr3L:10585077-10585197 4.07e-06 9_[+1(7.66e-05)]_7_[+5(2.90e-05)]_\ 10_[+5(2.90e-05)]_10_[+1(7.66e-05)]_1_[+5(6.75e-05)]_1_[+5(5.37e-05)]_1_\ [+1(7.66e-05)]_1_[+5(2.90e-05)]_16 chr3R:24079752-24079872 5.92e-01 120 chr2L:18546565-18546685 4.17e-08 18_[+3(1.81e-05)]_1_[+4(4.99e-05)]_\ 1_[+4(1.66e-05)]_4_[+4(1.66e-05)]_1_[+3(1.81e-05)]_4_[+4(1.66e-05)]_43 chr4:332407-332527 8.72e-01 120 chr3L:11542576-11542696 2.70e-07 1_[+4(1.66e-05)]_4_[+3(1.81e-05)]_1_\ [+4(4.99e-05)]_1_[+4(4.99e-05)]_81 chr2L:17973138-17973258 1.15e-05 23_[+1(7.66e-05)]_4_[+1(7.66e-05)]_\ 7_[+5(6.75e-05)]_10_[+5(1.57e-05)]_44 chr2R:10612127-10612247 5.31e-06 28_[+5(1.57e-05)]_7_[+5(4.24e-05)]_\ 1_[+5(6.75e-05)]_31_[+1(3.90e-05)]_1_[+5(1.57e-05)]_4_[+5(1.57e-05)] chrX:9396978-9397098 9.99e-01 120 chr3R:29695883-29696003 1.43e-05 54_[+1(7.66e-05)]_4_[+1(7.66e-05)]_\ 1_[+1(7.66e-05)]_25_[+5(1.57e-05)]_4 chrX:17597761-17597881 7.88e-01 120 chr2R:14032758-14032878 3.31e-01 120 chr2R:5130816-5130936 9.76e-01 120 chr2L:5320206-5320326 6.58e-08 52_[+4(1.66e-05)]_7_[+4(1.66e-05)]_\ 4_[+4(1.66e-05)]_4_[+4(1.66e-05)]_4_[+4(4.99e-05)]_9 chr3L:6947711-6947831 4.26e-06 15_[+5(2.90e-05)]_7_[+1(3.90e-05)]_\ 1_[+5(1.57e-05)]_16_[+1(7.66e-05)]_22_[+5(1.57e-05)]_19 chr2L:21726236-21726356 4.66e-01 120 chr3L:5327960-5328080 1.31e-03 120 chr3R:14578248-14578368 5.53e-02 86_[+4(4.99e-05)]_26 chr3R:31370334-31370454 8.17e-06 50_[+5(1.57e-05)]_1_[+5(8.60e-05)]_\ 1_[+5(1.57e-05)]_4_[+5(1.57e-05)]_7_[+5(1.57e-05)]_17 chr2L:9994539-9994659 1.06e-06 10_[+5(2.90e-05)]_4_[+1(7.66e-05)]_\ 4_[+5(2.90e-05)]_1_[+1(7.66e-05)]_19_[+5(2.90e-05)]_42 chr2R:11208466-11208586 1.22e-05 8_[+5(1.57e-05)]_40_[+1(3.90e-05)]_\ 10_[+1(7.66e-05)]_7_[+5(1.57e-05)]_23 chrX:17763761-17763881 9.44e-01 120 chrX:6740149-6740269 7.14e-01 120 chrX:10607768-10607888 8.64e-08 3_[+3(3.57e-05)]_19_[+3(1.81e-05)]_\ 13_[+3(3.57e-05)]_4_[+3(1.81e-05)]_13_[+4(1.66e-05)]_4_[+3(1.81e-05)]_4_\ [+4(1.66e-05)]_4 chr2R:7740521-7740641 3.09e-07 11_[+3(1.81e-05)]_13_[+3(1.81e-05)]_\ 4_[+4(1.66e-05)]_29_[+1(1.98e-05)]_[+3(1.81e-05)]_23 chr3L:11604339-11604459 1.68e-05 [+5(4.24e-05)]_4_[+1(7.66e-05)]_7_\ [+5(1.57e-05)]_43_[+5(1.57e-05)]_7_[+1(7.66e-05)]_4_[+5(1.57e-05)]_7 chr3L:7161449-7161569 3.09e-07 55_[+3(1.81e-05)]_1_[+3(1.81e-05)]_\ 13_[+4(1.66e-05)]_4_[+3(1.81e-05)]_15 chr2L:3605812-3605932 9.95e-08 43_[+4(1.66e-05)]_1_[+4(3.47e-05)]_\ 19_[+3(1.81e-05)]_4_[+4(1.66e-05)]_4_[+4(1.66e-05)]_9 chr3L:9045035-9045155 7.07e-01 120 chr3L:14025848-14025968 5.65e-07 83_[+3(1.81e-05)]_7_[+3(1.81e-05)]_\ 1_[+3(1.81e-05)]_5 chrX:12545315-12545435 8.22e-01 120 chrX:16575236-16575356 9.99e-01 120 chrX:9423062-9423182 9.99e-01 120 chr3L:9262407-9262527 2.24e-01 120 chrX:21333274-21333394 8.64e-08 4_[+4(1.66e-05)]_4_[+4(1.66e-05)]_7_\ 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9.08e-06 [+1(7.66e-05)]_14_[+5(4.24e-05)]_90 chr3R:14965424-14965544 5.03e-07 56_[+3(1.81e-05)]_56 chr2R:8855390-8855510 9.98e-01 120 chrX:12715083-12715203 3.03e-07 3_[+4(4.99e-05)]_1_[+3(1.81e-05)]_1_\ [+3(1.81e-05)]_1_[+3(1.81e-05)]_49_[+4(1.66e-05)]_4_[+3(1.81e-05)]_13 chr2R:5966003-5966123 5.74e-01 120 chr3L:9471411-9471531 1.65e-05 54_[+5(1.57e-05)]_13_[+5(6.75e-05)]_\ 7_[+5(2.90e-05)]_1_[+5(2.90e-05)]_4_[+1(7.66e-05)]_1 chr2L:20434918-20435038 8.07e-01 120 chr4:149262-149382 8.71e-01 120 chr3L:3150589-3150709 1.89e-05 20_[+1(7.66e-05)]_13_[+1(7.66e-05)]_\ 13_[+5(2.90e-05)]_7_[+1(7.66e-05)]_1_[+5(2.90e-05)]_1_[+1(7.66e-05)]_17 chr3L:4729944-4730064 2.75e-05 27_[+5(6.75e-05)]_4_[+1(7.66e-05)]_\ 7_[+5(6.75e-05)]_7_[+5(6.75e-05)]_43 chrX:9093201-9093321 1.04e-01 120 chr3R:7275112-7275232 3.09e-07 13_[+3(1.81e-05)]_10_[+4(1.66e-05)]_\ 1_[+4(4.99e-05)]_1_[+3(1.81e-05)]_1_[+3(1.81e-05)]_10_[+4(1.66e-05)]_36 chr3L:21230901-21231021 1.67e-05 12_[+5(1.57e-05)]_1_[+5(8.60e-05)]_\ 22_[+1(7.66e-05)]_24_[+1(7.66e-05)]_13_[+5(2.90e-05)]_8 chrX:18350748-18350868 4.12e-01 120 chrX:1715013-1715133 2.91e-01 120 chr2R:6198557-6198677 9.13e-01 120 chr3R:9232499-9232619 2.90e-08 1_[+4(1.66e-05)]_1_[+4(3.47e-05)]_4_\ [+3(1.81e-05)]_16_[+4(1.66e-05)]_13_[+1(1.98e-05)]_45 chr3L:2328943-2329063 6.06e-02 120 chr3R:11375281-11375401 6.94e-06 12_[+5(1.57e-05)]_25_[+1(7.66e-05)]_\ 16_[+5(1.57e-05)]_13_[+1(7.66e-05)]_4_[+5(1.57e-05)]_10 chr2R:1595434-1595554 4.59e-01 120 chr2L:20020230-20020350 6.72e-01 120 chr3R:19725723-19725843 8.34e-04 38_[+1(1.98e-05)]_74 chr2L:594187-594307 9.15e-01 120 chr3L:21436212-21436332 9.32e-06 32_[+1(7.66e-05)]_22_[+1(7.66e-05)]_\ 28_[+1(7.66e-05)]_14 chr3L:21871912-21872032 5.66e-01 120 chr2R:21583187-21583307 5.81e-03 13_[+4(6.81e-05)]_99 chr3R:6801292-6801412 5.05e-05 8_[+1(7.66e-05)]_10_[+1(7.66e-05)]_\ 86 chr2L:1975612-1975732 5.22e-01 120 chrX:17940816-17940936 8.64e-08 22_[+4(1.66e-05)]_7_[+3(1.81e-05)]_\ 4_[+4(1.66e-05)]_19_[+3(1.81e-05)]_1_[+3(1.81e-05)]_1_[+4(1.66e-05)]_18 chr3R:29767353-29767473 2.20e-05 5_[+1(7.66e-05)]_17_[+5(2.90e-05)]_\ 36_[+1(7.66e-05)]_1_[+1(7.66e-05)]_20_[+5(4.24e-05)]_1 chr2R:5108119-5108239 7.32e-01 120 chr2L:241554-241674 3.09e-07 10_[+3(1.81e-05)]_4_[+4(4.99e-05)]_\ 1_[+4(1.66e-05)]_28_[+4(1.66e-05)]_16_[+3(1.81e-05)]_1_[+4(1.66e-05)]_12 chr3R:21445466-21445586 3.24e-05 55_[+1(7.66e-05)]_57 chr2R:11506068-11506188 8.90e-01 120 chr2L:21689507-21689627 2.81e-01 120 chr2R:4343763-4343883 3.10e-01 120 chr3R:15627413-15627533 5.10e-01 120 chr3R:28237936-28238056 1.15e-05 8_[+1(7.66e-05)]_22_[+1(7.66e-05)]_\ 46_[+5(1.57e-05)]_4_[+1(7.66e-05)]_8 chr2L:11236503-11236623 2.61e-05 11_[+5(2.90e-05)]_4_[+1(7.66e-05)]_\ 1_[+5(5.37e-05)]_7_[+5(2.90e-05)]_65 chr2R:22466608-22466728 3.71e-02 120 chr3L:12329688-12329808 5.34e-05 26_[+5(6.75e-05)]_1_[+1(7.66e-05)]_\ 16_[+5(6.75e-05)]_53 chr2L:9266199-9266319 3.28e-01 120 chrX:10340631-10340751 2.74e-01 120 chr3L:7890105-7890225 2.13e-05 43_[+5(2.90e-05)]_4_[+5(5.37e-05)]_\ 1_[+5(5.37e-05)]_1_[+1(7.66e-05)]_1_[+1(7.66e-05)]_1_[+5(2.90e-05)]_21 chr2L:20690219-20690339 8.64e-08 22_[+3(1.81e-05)]_4_[+4(1.66e-05)]_\ 58_[+3(1.81e-05)]_12 chr2R:11645676-11645796 2.64e-06 20_[+4(1.66e-05)]_1_[+4(1.66e-05)]_\ 10_[+3(1.81e-05)]_10_[+4(1.66e-05)]_19_[+4(1.66e-05)]_20 chrX:7686210-7686330 2.90e-08 19_[+1(1.98e-05)]_17_[+4(1.66e-05)]_\ 4_[+4(1.66e-05)]_22_[+3(1.81e-05)]_26 chr3L:7624700-7624820 3.04e-01 5_[+5(5.37e-05)]_107 chr3L:14125755-14125875 3.59e-07 34_[+3(1.81e-05)]_24_[+3(1.81e-05)]_\ 46 chr3R:28775842-28775962 7.72e-07 2_[+3(1.81e-05)]_110 chr2L:19594241-19594361 3.97e-01 120 chr2R:7851638-7851758 9.65e-01 120 chr3L:18124277-18124397 2.33e-01 120 chr2R:10233930-10234050 3.09e-07 46_[+3(1.81e-05)]_7_[+4(1.66e-05)]_\ 1_[+4(1.66e-05)]_1_[+3(1.81e-05)]_1_[+3(1.81e-05)]_4_[+4(1.66e-05)]_4_\ [+4(1.66e-05)] chr3R:22602922-22603042 1.68e-05 2_[+5(1.57e-05)]_19_[+1(7.66e-05)]_\ 13_[+5(6.75e-05)]_4_[+5(1.57e-05)]_13_[+5(6.75e-05)]_7_[+5(2.90e-05)]_1_\ [+1(7.66e-05)]_5 chr2L:5610768-5610888 9.08e-01 120 chrX:12708445-12708565 2.76e-05 3_[+5(2.90e-05)]_7_[+5(2.90e-05)]_4_\ [+5(2.90e-05)]_4_[+1(7.66e-05)]_7_[+1(7.66e-05)]_1_[+1(7.66e-05)]_29_\ [+5(2.90e-05)]_9 chr3R:4362149-4362269 8.94e-01 120 chr3L:16851705-16851825 1.15e-05 [+5(1.57e-05)]_13_[+5(6.75e-05)]_19_\ [+1(7.66e-05)]_7_[+5(1.57e-05)]_10_[+5(4.24e-05)]_7_[+5(2.90e-05)]_4_\ [+5(1.57e-05)]_4 chr2R:4676956-4677076 3.23e-01 120 chr2R:4802210-4802330 1.00e+00 120 chr2R:21221402-21221522 3.03e-07 1_[+4(1.66e-05)]_7_[+4(4.99e-05)]_1_\ [+3(1.81e-05)]_1_[+3(1.81e-05)]_6_[+3(1.81e-05)]_38_[+3(1.81e-05)]_1_\ [+3(1.81e-05)]_1_[+4(4.99e-05)] chr2L:22163441-22163561 3.19e-01 120 chr3L:21549993-21550113 6.25e-06 8_[+4(1.66e-05)]_7_[+4(1.66e-05)]_\ 19_[+4(1.66e-05)]_7_[+4(1.66e-05)]_22_[+4(1.66e-05)]_17 chr3R:31066267-31066387 8.73e-01 120 chrX:7714031-7714151 8.64e-08 6_[+4(1.66e-05)]_7_[+4(1.66e-05)]_4_\ [+3(1.81e-05)]_1_[+3(1.81e-05)]_1_[+4(1.66e-05)]_61 chr4:1121051-1121171 5.54e-01 120 chr3R:18011470-18011590 1.12e-05 11_[+1(7.66e-05)]_1_[+1(7.66e-05)]_\ 1_[+1(7.66e-05)]_19_[+5(1.57e-05)]_16_[+5(6.75e-05)]_4_[+1(7.66e-05)]_20 chr2R:5154278-5154398 1.09e-02 84_[+4(6.81e-05)]_28 chr2R:17075625-17075745 1.22e-07 47_[+3(1.81e-05)]_54_[+4(1.66e-05)]_\ 3 chr3R:9191839-9191959 1.20e-01 120 chr3R:18236771-18236891 4.02e-05 66_[+1(7.66e-05)]_1_[+1(7.66e-05)]_\ 37 chr3R:9895315-9895435 8.36e-02 2_[+5(9.77e-05)]_110 chrX:9204040-9204160 6.37e-01 120 chr3R:15246186-15246306 5.36e-02 120 chr3L:11524468-11524588 5.27e-05 34_[+1(1.98e-05)]_78 chr3L:7764888-7765008 7.05e-08 6_[+4(1.66e-05)]_7_[+4(1.66e-05)]_\ 19_[+4(1.66e-05)]_34_[+3(1.81e-05)]_22 chr2R:15658717-15658837 4.18e-01 120 chr3R:24716815-24716935 1.08e-05 32_[+1(7.66e-05)]_34_[+1(7.66e-05)]_\ 1_[+5(1.57e-05)]_29 chr3R:13873523-13873643 6.58e-09 3_[+4(1.66e-05)]_4_[+4(1.66e-05)]_\ 19_[+1(7.66e-05)]_70 chr3L:2789555-2789675 1.92e-07 9_[+3(1.81e-05)]_1_[+3(1.81e-05)]_1_\ [+3(1.81e-05)]_1_[+4(1.66e-05)]_1_[+4(1.66e-05)]_1_[+3(1.81e-05)]_1_\ [+3(1.81e-05)]_1_[+3(1.81e-05)]_7_[+4(1.66e-05)]_25 chrX:20357619-20357739 9.53e-01 120 chr2L:21383675-21383795 1.96e-02 120 chr3R:31660976-31661096 1.67e-05 38_[+5(1.57e-05)]_1_[+5(8.60e-05)]_\ 4_[+1(7.66e-05)]_13_[+1(7.66e-05)]_1_[+5(1.57e-05)]_7_[+1(7.66e-05)]_8 chr3L:23001154-23001274 9.99e-01 120 chr2L:1864018-1864138 8.10e-02 120 chr2R:1233766-1233886 1.02e-01 120 chr2L:11255853-11255973 1.61e-05 9_[+5(1.57e-05)]_103 chr2R:7046904-7047024 1.09e-01 120 chr3R:8167213-8167333 3.03e-07 6_[+1(1.98e-05)]_20_[+4(1.66e-05)]_\ 10_[+4(1.66e-05)]_9_[+4(1.66e-05)]_4_[+3(1.81e-05)]_1_[+3(1.81e-05)]_1_\ [+4(1.66e-05)]_13 chr2R:24333540-24333660 3.09e-07 15_[+3(1.81e-05)]_4_[+3(1.81e-05)]_\ 7_[+4(1.66e-05)]_4_[+4(1.66e-05)]_4_[+4(1.66e-05)]_7_[+4(1.66e-05)]_1_\ [+4(3.47e-05)]_22 chr2L:22003047-22003167 9.74e-01 120 chr2R:22260723-22260843 3.84e-01 120 chr2R:5209820-5209940 9.99e-01 120 chrX:6917748-6917868 8.52e-06 8_[+1(7.66e-05)]_22_[+1(7.66e-05)]_\ 4_[+5(1.57e-05)]_1_[+5(1.57e-05)]_10_[+5(1.57e-05)]_4_[+1(7.66e-05)]_1_\ [+5(6.75e-05)]_14 chr3R:15399124-15399244 7.75e-06 26_[+5(1.57e-05)]_4_[+1(7.66e-05)]_\ 1_[+1(7.66e-05)]_10_[+1(7.66e-05)]_31_[+1(7.66e-05)]_8 chrX:21473271-21473391 3.82e-01 120 chr3R:20820181-20820301 3.09e-07 22_[+1(1.98e-05)]_[+3(1.81e-05)]_1_\ [+4(1.66e-05)]_16_[+4(1.66e-05)]_4_[+3(1.81e-05)]_37 chr2L:9745874-9745994 9.78e-01 120 chrX:10202249-10202369 1.00e+00 120 chr3R:16827730-16827850 3.09e-07 8_[+4(4.99e-05)]_1_[+3(1.81e-05)]_\ 10_[+3(1.81e-05)]_37_[+4(1.66e-05)]_1_[+4(4.99e-05)]_1_[+3(1.81e-05)]_14 chrX:6964265-6964385 6.57e-01 120 chr3L:11602924-11603044 7.88e-02 120 chrX:3472614-3472734 2.83e-07 42_[+4(6.81e-05)]_13_[+4(1.66e-05)]_\ 27_[+3(3.57e-05)]_14 chrX:6693639-6693759 1.84e-07 21_[+4(1.66e-05)]_16_[+4(1.66e-05)]_\ 10_[+4(1.66e-05)]_7_[+4(1.66e-05)]_1_[+4(1.66e-05)]_1_[+3(1.81e-05)]_4_\ [+4(4.99e-05)]_4 chr4:233643-233763 9.97e-01 120 chr3R:11460266-11460386 5.08e-01 120 chr2L:20953203-20953323 3.09e-07 52_[+4(4.99e-05)]_1_[+4(4.99e-05)]_\ 1_[+3(1.81e-05)]_42 chr4:515936-516056 9.19e-01 120 chr3L:10870189-10870309 1.63e-05 4_[+1(7.66e-05)]_13_[+1(7.66e-05)]_\ 28_[+5(1.57e-05)]_1_[+5(1.57e-05)]_1_[+5(8.60e-05)]_4_[+1(7.66e-05)]_21 chrX:5741734-5741854 9.97e-01 120 chrX:11216142-11216262 7.21e-01 120 chr3R:30109542-30109662 1.67e-05 65_[+5(1.57e-05)]_13_[+1(7.66e-05)]_\ 4_[+5(2.90e-05)]_1_[+1(7.66e-05)]_5 chr2L:6888241-6888361 4.68e-05 36_[+1(7.66e-05)]_76 chr3L:22063348-22063468 2.86e-01 120 chr2R:18763039-18763159 5.00e-04 40_[+3(8.77e-05)]_72 chr3R:26085744-26085864 1.43e-05 25_[+5(1.57e-05)]_4_[+1(7.66e-05)]_\ 7_[+1(7.66e-05)]_1_[+5(1.57e-05)]_4_[+5(1.57e-05)]_39 chr2L:12129115-12129235 4.82e-02 58_[+5(5.37e-05)]_54 chr2L:12276874-12276994 7.07e-02 120 chrX:7689031-7689151 3.09e-07 14_[+4(4.99e-05)]_1_[+4(4.99e-05)]_\ 1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_1_\ [+4(4.99e-05)]_1_[+3(1.81e-05)]_1_[+3(1.81e-05)]_1_[+3(1.81e-05)]_17 chr3L:8369930-8370050 1.29e-07 13_[+3(1.81e-05)]_4_[+3(1.81e-05)]_\ 1_[+3(1.81e-05)]_13_[+4(1.66e-05)]_57 chr3L:14024842-14024962 5.59e-08 1_[+4(1.66e-05)]_16_[+4(4.99e-05)]_\ 61_[+3(1.81e-05)]_18 chr2L:7866048-7866168 2.24e-07 39_[+4(1.66e-05)]_4_[+3(1.81e-05)]_\ 1_[+3(1.81e-05)]_52 chr3L:14027717-14027837 1.22e-07 2_[+4(4.99e-05)]_1_[+4(4.99e-05)]_1_\ [+4(4.99e-05)]_1_[+4(4.99e-05)]_1_[+4(4.99e-05)]_4_[+4(1.66e-05)]_4_\ [+3(1.81e-05)]_7_[+4(1.66e-05)]_22_[+3(1.81e-05)]_5 chr2R:6030565-6030685 9.29e-01 120 chr3R:4736219-4736339 9.69e-01 120 chr3L:9996526-9996646 9.43e-01 120 chr3R:4268606-4268726 9.98e-01 120 chrX:8185049-8185169 1.07e-01 120 chrX:2960514-2960634 8.95e-01 120 chr2R:14680332-14680452 9.73e-05 66_[+3(8.77e-05)]_46 chrX:8739027-8739147 3.39e-01 120 chrX:7310561-7310681 3.22e-02 120 chr2R:12219620-12219740 5.06e-03 120 chr3L:23300402-23300522 9.18e-02 120 chrX:18895036-18895156 1.25e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n08.farnam.hpc.yale.internal ********************************************************************************