******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CTCF.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2R:17142191-17142311 1.0000 120 chr2R:23114576-23114696 1.0000 120 chr4:718719-718839 1.0000 120 chr2R:12843801-12843921 1.0000 120 chr2L:14211495-14211615 1.0000 120 chr2L:18294522-18294642 1.0000 120 chr2R:14447893-14448013 1.0000 120 chr3L:1041528-1041648 1.0000 120 chrX:15353820-15353940 1.0000 120 chr2L:8185162-8185282 1.0000 120 chr2L:7953486-7953606 1.0000 120 chr2L:10603760-10603880 1.0000 120 chr2R:17141498-17141618 1.0000 120 chr2L:5036247-5036367 1.0000 120 chr3L:11315321-11315441 1.0000 120 chr3L:15011282-15011402 1.0000 120 chr3R:8389781-8389901 1.0000 120 chr2R:12747054-12747174 1.0000 120 chr2R:13340253-13340373 1.0000 120 chr2L:15903874-15903994 1.0000 120 chr2L:3183299-3183419 1.0000 120 chr3R:11394038-11394158 1.0000 120 chrX:2684610-2684730 1.0000 120 chr3R:27098761-27098881 1.0000 120 chr2R:8623359-8623479 1.0000 120 chr3R:27477642-27477762 1.0000 120 chr3L:12380745-12380865 1.0000 120 chrX:12540907-12541027 1.0000 120 chr3L:9356298-9356418 1.0000 120 chr2R:14653904-14654024 1.0000 120 chr2L:12373742-12373862 1.0000 120 chr2R:14446974-14447094 1.0000 120 chr2L:1902364-1902484 1.0000 120 chr2R:23220460-23220580 1.0000 120 chr2R:23235099-23235219 1.0000 120 chr2R:22364384-22364504 1.0000 120 chr3R:28317297-28317417 1.0000 120 chr2L:15783120-15783240 1.0000 120 chr3R:8456603-8456723 1.0000 120 chr2L:15439081-15439201 1.0000 120 chr2L:12602962-12603082 1.0000 120 chr2L:17195328-17195448 1.0000 120 chrX:3815814-3815934 1.0000 120 chr2R:7287970-7288090 1.0000 120 chr3L:22214859-22214979 1.0000 120 chrX:7593213-7593333 1.0000 120 chrX:5957171-5957291 1.0000 120 chr3L:13146643-13146763 1.0000 120 chr2R:22133994-22134114 1.0000 120 chrX:7466460-7466580 1.0000 120 chrX:19585276-19585396 1.0000 120 chr2R:8340282-8340402 1.0000 120 chr3L:20580746-20580866 1.0000 120 chr3L:14461188-14461308 1.0000 120 chr3L:7560718-7560838 1.0000 120 chrX:12306690-12306810 1.0000 120 chr2L:8024487-8024607 1.0000 120 chrX:11320045-11320165 1.0000 120 chr3R:9956873-9956993 1.0000 120 chr3R:15632586-15632706 1.0000 120 chr3R:11544290-11544410 1.0000 120 chr2L:18516495-18516615 1.0000 120 chr3L:20138464-20138584 1.0000 120 chr2L:18348101-18348221 1.0000 120 chr2R:7123449-7123569 1.0000 120 chr2L:13540859-13540979 1.0000 120 chr3R:30990083-30990203 1.0000 120 chr3R:26432672-26432792 1.0000 120 chr2R:17692450-17692570 1.0000 120 chrX:5607804-5607924 1.0000 120 chr3L:13271405-13271525 1.0000 120 chr3R:31181978-31182098 1.0000 120 chr2L:20826350-20826470 1.0000 120 chr2L:19246009-19246129 1.0000 120 chr3L:18916595-18916715 1.0000 120 chrX:7744084-7744204 1.0000 120 chrX:23089515-23089635 1.0000 120 chr2L:6173132-6173252 1.0000 120 chr3R:4632782-4632902 1.0000 120 chr2L:10626057-10626177 1.0000 120 chr3L:14420149-14420269 1.0000 120 chr2L:12880602-12880722 1.0000 120 chr3R:25876758-25876878 1.0000 120 chr2R:9611537-9611657 1.0000 120 chr3L:14356635-14356755 1.0000 120 chr2L:19634164-19634284 1.0000 120 chrX:12292595-12292715 1.0000 120 chr3R:10538919-10539039 1.0000 120 chr3L:4072822-4072942 1.0000 120 chr2R:24840675-24840795 1.0000 120 chrX:5187269-5187389 1.0000 120 chrX:20105119-20105239 1.0000 120 chr2R:12234295-12234415 1.0000 120 chr2R:12847388-12847508 1.0000 120 chr3L:15366452-15366572 1.0000 120 chr3R:11395678-11395798 1.0000 120 chr3L:10078694-10078814 1.0000 120 chr2R:9463585-9463705 1.0000 120 chr3L:14365572-14365692 1.0000 120 chr2L:19415323-19415443 1.0000 120 chr2R:22462877-22462997 1.0000 120 chr3L:16632285-16632405 1.0000 120 chr3L:5957296-5957416 1.0000 120 chr3L:3596480-3596600 1.0000 120 chr3L:5125341-5125461 1.0000 120 chr2R:6718281-6718401 1.0000 120 chrX:14585421-14585541 1.0000 120 chrX:868574-868694 1.0000 120 chr3R:29553305-29553425 1.0000 120 chr3L:12049708-12049828 1.0000 120 chr3L:17208753-17208873 1.0000 120 chr3R:3888896-3889016 1.0000 120 chr3R:12222722-12222842 1.0000 120 chr3L:21090319-21090439 1.0000 120 chr2R:6525378-6525498 1.0000 120 chr3R:22965370-22965490 1.0000 120 chrX:11643382-11643502 1.0000 120 chr3R:30770829-30770949 1.0000 120 chr2L:13325962-13326082 1.0000 120 chrX:2811200-2811320 1.0000 120 chr3L:17237093-17237213 1.0000 120 chr3R:24503767-24503887 1.0000 120 chr2L:887929-888049 1.0000 120 chr3L:20622323-20622443 1.0000 120 chr2L:20576078-20576198 1.0000 120 chr3R:23167814-23167934 1.0000 120 chr3L:11853047-11853167 1.0000 120 chrX:18838630-18838750 1.0000 120 chr3R:17970994-17971114 1.0000 120 chrX:13224991-13225111 1.0000 120 chr3R:17616666-17616786 1.0000 120 chr2R:21800245-21800365 1.0000 120 chr2R:8411392-8411512 1.0000 120 chr3L:5820949-5821069 1.0000 120 chr2R:15038854-15038974 1.0000 120 chr3R:23397049-23397169 1.0000 120 chr2R:12097603-12097723 1.0000 120 chr3R:24386589-24386709 1.0000 120 chr2R:13746453-13746573 1.0000 120 chr3L:17153627-17153747 1.0000 120 chrX:21058664-21058784 1.0000 120 chr2R:9363426-9363546 1.0000 120 chr3L:3702663-3702783 1.0000 120 chr2L:6584473-6584593 1.0000 120 chr2R:19528720-19528840 1.0000 120 chr2R:11053869-11053989 1.0000 120 chr3L:10199798-10199918 1.0000 120 chrX:2814579-2814699 1.0000 120 chr3R:5527720-5527840 1.0000 120 chr2L:18284304-18284424 1.0000 120 chr2L:20481596-20481716 1.0000 120 chr2R:17214369-17214489 1.0000 120 chr2R:9470975-9471095 1.0000 120 chr2L:7097553-7097673 1.0000 120 chr2L:17953399-17953519 1.0000 120 chr2L:14112336-14112456 1.0000 120 chr2R:23108192-23108312 1.0000 120 chr3L:19328192-19328312 1.0000 120 chr2L:19382520-19382640 1.0000 120 chr2L:17650912-17651032 1.0000 120 chrX:18254615-18254735 1.0000 120 chrX:16624669-16624789 1.0000 120 chr2R:13356041-13356161 1.0000 120 chr3R:22810408-22810528 1.0000 120 chr2R:15578904-15579024 1.0000 120 chr2L:19682690-19682810 1.0000 120 chr2R:20305553-20305673 1.0000 120 chr3L:684203-684323 1.0000 120 chrX:3123711-3123831 1.0000 120 chr3L:18161295-18161415 1.0000 120 chr2L:3035095-3035215 1.0000 120 chr2R:25187894-25188014 1.0000 120 chr2L:12374695-12374815 1.0000 120 chr2L:17163458-17163578 1.0000 120 chrX:15203797-15203917 1.0000 120 chr3R:13872321-13872441 1.0000 120 chr3R:9673362-9673482 1.0000 120 chr2L:3179812-3179932 1.0000 120 chr2R:15783185-15783305 1.0000 120 chr2R:10923851-10923971 1.0000 120 chr3L:2407402-2407522 1.0000 120 chr3R:20347022-20347142 1.0000 120 chr3R:19103304-19103424 1.0000 120 chrX:12353603-12353723 1.0000 120 chr3L:16705767-16705887 1.0000 120 chr3L:12949534-12949654 1.0000 120 chr3R:16408540-16408660 1.0000 120 chr3L:17292317-17292437 1.0000 120 chrX:14879020-14879140 1.0000 120 chr2R:9678015-9678135 1.0000 120 chrX:18980528-18980648 1.0000 120 chrX:22544803-22544923 1.0000 120 chr3R:9196002-9196122 1.0000 120 chrX:17472591-17472711 1.0000 120 chr2R:22768530-22768650 1.0000 120 chr3L:5905847-5905967 1.0000 120 chr3R:19774335-19774455 1.0000 120 chr2L:9067237-9067357 1.0000 120 chrX:8371898-8372018 1.0000 120 chrX:7005547-7005667 1.0000 120 chr3L:20464817-20464937 1.0000 120 chr3R:30294738-30294858 1.0000 120 chr2L:17201920-17202040 1.0000 120 chr3R:19271277-19271397 1.0000 120 chr3L:24054623-24054743 1.0000 120 chr3R:10501330-10501450 1.0000 120 chr3L:4913788-4913908 1.0000 120 chrX:7422728-7422848 1.0000 120 chr2L:19309178-19309298 1.0000 120 chr3R:27843922-27844042 1.0000 120 chr2L:1492421-1492541 1.0000 120 chr3R:19657380-19657500 1.0000 120 chr3R:19245548-19245668 1.0000 120 chrX:14712622-14712742 1.0000 120 chr3L:17383854-17383974 1.0000 120 chr2R:9677296-9677416 1.0000 120 chr3R:20066566-20066686 1.0000 120 chr3R:19490074-19490194 1.0000 120 chr3R:5927988-5928108 1.0000 120 chr2R:16462388-16462508 1.0000 120 chr3L:15328531-15328651 1.0000 120 chr3L:20999779-20999899 1.0000 120 chrX:2803926-2804046 1.0000 120 chrX:6550220-6550340 1.0000 120 chr3R:11934010-11934130 1.0000 120 chr3L:4978164-4978284 1.0000 120 chr2R:10162520-10162640 1.0000 120 chr2R:10326384-10326504 1.0000 120 chr3L:4776563-4776683 1.0000 120 chr2L:19270851-19270971 1.0000 120 chr2L:6301751-6301871 1.0000 120 chr3L:15494701-15494821 1.0000 120 chr3R:14959515-14959635 1.0000 120 chr2L:18765518-18765638 1.0000 120 chrX:6128855-6128975 1.0000 120 chrX:5588600-5588720 1.0000 120 chr2L:17958456-17958576 1.0000 120 chr2L:12803599-12803719 1.0000 120 chr3L:18842378-18842498 1.0000 120 chrX:20583443-20583563 1.0000 120 chrX:19811182-19811302 1.0000 120 chrX:20386018-20386138 1.0000 120 chrX:14122856-14122976 1.0000 120 chr2L:6391600-6391720 1.0000 120 chr2R:21177912-21178032 1.0000 120 chr3L:5201910-5202030 1.0000 120 chrX:4511752-4511872 1.0000 120 chr3L:7941657-7941777 1.0000 120 chr2R:15375212-15375332 1.0000 120 chr3R:24477590-24477710 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CTCF/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CTCF.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.254 C 0.248 G 0.244 T 0.254 Background letter frequencies (from file dataset with add-one prior applied): A 0.254 C 0.248 G 0.244 T 0.254 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GCGCCAYC MEME-1 width = 8 sites = 163 llr = 1321 E-value = 3.3e-147 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1::::8:: pos.-specific C :a:9a259 probability G 8:9:::1: matrix T ::1:::41 bits 2.0 * 1.8 * * 1.6 **** 1.4 **** * Relative 1.2 ***** * Entropy 1.0 ****** * (11.7 bits) 0.8 ****** * 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCGCCACC consensus CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:10326384-10326504 57 1.42e-05 GAAGCTGCTG GCGCCACC TGTTGCCGAC chrX:2803926-2804046 23 1.42e-05 TGCCCATAAA GCGCCACC TAACGGCCGT chr2R:16462388-16462508 32 1.42e-05 TAATAGGGCA GCGCCACC TATTGGCGAG chrX:14712622-14712742 41 1.42e-05 CTTTGAGGTG GCGCCACC TAGTGAGCGC chr3L:16705767-16705887 48 1.42e-05 GAATAACTTA GCGCCACC TGGCGGAAAC chr3R:9673362-9673482 22 1.42e-05 ACTTGGAGAT GCGCCACC TGGCGGATGA chrX:18254615-18254735 24 1.42e-05 GGACACAAAT GCGCCACC TGTTGCTGAT chr3L:19328192-19328312 109 1.42e-05 TCTGAAGTCT GCGCCACC GTGG chr2R:17214369-17214489 85 1.42e-05 TGCGACAGAG GCGCCACC TAGCGCCCGG chr3R:5527720-5527840 7 1.42e-05 ATTGTT GCGCCACC TGGCGGCAGC chrX:2814579-2814699 38 1.42e-05 CCGGCAGGTG GCGCCACC CACGGGAACG chr3L:10199798-10199918 36 1.42e-05 CGTCACGGCG GCGCCACC TGGCGGAACA chr3L:3702663-3702783 66 1.42e-05 TTTGTTAAAA GCGCCACC TAGCGCTGCG chr3L:17153627-17153747 38 1.42e-05 CCCAAGGGCA GCGCCACC TAGTGGCCGA chr2R:13746453-13746573 90 1.42e-05 ACTTCACCAA GCGCCACC GACAGCTGTC chr3R:23397049-23397169 43 1.42e-05 AGAGTGCGTA GCGCCACC TGTCGACGAT chr3R:23167814-23167934 50 1.42e-05 CCAACAGGTG GCGCCACC CCACTCCACT chrX:2811200-2811320 37 1.42e-05 CGCCGGTGTG GCGCCACC TAGCGGCCAG chr3R:30770829-30770949 79 1.42e-05 TCGCCAGCGG GCGCCACC TGTCGTCCAT chr3R:3888896-3889016 44 1.42e-05 cgagaataaa gcgccacc tgtgcttggg chr2R:22462877-22462997 41 1.42e-05 CTTGTGGGCA GCGCCACC TGGTGGCCTG chr2L:19415323-19415443 39 1.42e-05 ACAAGTGGTG GCGCCACC TGGCGTCTGC chrX:20105119-20105239 72 1.42e-05 CTTTAAAGTG GCGCCACC TAGGTGTCAA chr2L:12880602-12880722 42 1.42e-05 TCTTAGAAGG GCGCCACC TAGCGGCAGG chr3L:14420149-14420269 76 1.42e-05 GGCTCCCAGA GCGCCACC TACAGTTGAT chr2L:19246009-19246129 8 1.42e-05 tgCTGGG GCGCCACC TGGCGGACGC chr2R:17692450-17692570 42 1.42e-05 ATTATCTGAT GCGCCACC TATCGGATAC chr3R:30990083-30990203 49 1.42e-05 GCATGCAACA GCGCCACC TGGTGGCCAG chr2L:18348101-18348221 35 1.42e-05 GCCATCAGCA GCGCCACC TAGCGGCGTT chr2L:18516495-18516615 80 1.42e-05 TGTCGGACAT GCGCCACC TGTCGGCGGT chr3L:22214859-22214979 74 1.42e-05 CGGCCAGAGG GCGCCACC TAAATATCCG chr3R:8456603-8456723 57 1.42e-05 TTGTAAGCGT GCGCCACC TAGCGATGGA chr2L:15783120-15783240 72 1.42e-05 CTGGTAATGA GCGCCACC TACCGGCGGT chr2R:22364384-22364504 49 1.42e-05 TCCTCCAACA GCGCCACC TGTTGCTCGC chr3L:12380745-12380865 33 1.42e-05 TGGACACCTG GCGCCACC TATGGGGTAA chr2R:8623359-8623479 79 1.42e-05 ACCATCAGCA GCGCCACC TGTCGGCCAT chr2L:15903874-15903994 48 1.42e-05 TTTAATGAGT GCGCCACC TGGTGGCGGC chr3R:8389781-8389901 60 1.42e-05 TGGCACGCCA GCGCCACC TGTTGGGTGC chr2L:7953486-7953606 66 1.42e-05 AACACCAATA GCGCCACC TACCGGGCGT chr3L:7941657-7941777 79 2.87e-05 AAGCTAGGTG GCGCCATC ATAAATTCAC chrX:5588600-5588720 56 2.87e-05 CTTTTGCGTG GCGCCATC TATCGTGGCC chrX:6550220-6550340 75 2.87e-05 AGTAATGGCA GCGCCATC TGTCGTTCCG chr2L:19309178-19309298 41 2.87e-05 TCTTGGTGTG GCGCCATC TACGTCTAAG chrX:7422728-7422848 21 2.87e-05 TGACACAGGT GCGCCATC TCGCGGTATA chr3R:30294738-30294858 42 2.87e-05 TGCCTGGCTG GCGCCATC TTCTGGTCAT chr3L:20464817-20464937 35 2.87e-05 CCGAACCATT GCGCCATC TATCGGGATC chr2R:10923851-10923971 56 2.87e-05 ATTTTCTCTC GCGCCATC TAGCGAGCGG chr2L:17163458-17163578 87 2.87e-05 TAAGACAAAG GCGCCATC TGGCGGAGGC chrX:3123711-3123831 47 2.87e-05 TGCCAGCGCA GCGCCATC TAGTGTAAAT chr3L:684203-684323 32 2.87e-05 TTGAACTGCA GCGCCATC TTCTGGATGA chr2R:15578904-15579024 47 2.87e-05 GGCACACGCA GCGCCATC TGTTGTGGTT chrX:16624669-16624789 53 2.87e-05 ACGCTAGATG GCGCCATC GAACAATGAT chr2L:14112336-14112456 32 2.87e-05 GTCCCGGCTG GCGCCATC TAGCGACAGT chr3L:5820949-5821069 33 2.87e-05 ACGCCGACTG GCGCCATC TACCGGGTCA chr3L:11853047-11853167 73 2.87e-05 AGTTACGCTT GCGCCATC TGGCGGGCGC chr3L:14365572-14365692 63 2.87e-05 ATTTGTAAAG GCGCCATC TGGCGTTGAG chr3L:15366452-15366572 39 2.87e-05 CGCGTAAAGT GCGCCATC TAGCGTCGTT chr3R:31181978-31182098 20 2.87e-05 CCAGGCGATA GCGCCATC TGGCGTGCAG chr2L:13540859-13540979 25 2.87e-05 TAGCATCAGA GCGCCATC TATTGGCTGG chrX:11320045-11320165 66 2.87e-05 CTGTTTTGCA GCGCCATC TACTTCTGGT chr3L:14461188-14461308 99 2.87e-05 ATCTTTTGGG GCGCCATC TATGGGTGGG chr2R:8340282-8340402 67 2.87e-05 TACCATACAA GCGCCATC TAGCGAGCGG chrX:19585276-19585396 83 2.87e-05 TTGATCGTTG GCGCCATC TATGTAAGTT chr2R:22133994-22134114 43 2.87e-05 TGGCTTAGTG GCGCCATC TAACAGATGT chrX:12540907-12541027 72 2.87e-05 ATCGACCGCA GCGCCATC TGTTGTCCAA chr2L:5036247-5036367 90 2.87e-05 CGACACTCTT GCGCCATC TGTTGGATAC chr2L:8185162-8185282 16 2.87e-05 CCGTATTAAA GCGCCATC TATCGAGCGC chr2L:17201920-17202040 44 4.26e-05 TGTTGCTGCA GCGCCCCC TGGCGGTGCT chr2R:9470975-9471095 80 4.26e-05 AGTCCAAGTG GCGCCCCC TAGCGTGGGC chr2R:11053869-11053989 61 4.26e-05 GCCAAGCCGA GCGCCCCC TGGCGACACA chr3L:20622323-20622443 66 4.26e-05 TTGTTAGCTG GCGCCCCC TAGTGCGAAA chr3R:24503767-24503887 31 4.26e-05 TAGCACGGCA GCGCCCCC TGGCGGGCGT chr2R:24840675-24840795 41 4.26e-05 GAGGTGTGAG GCGCCCCC TGCCGGGCGC chrX:12292595-12292715 48 4.26e-05 CAAACGTGTG GCGCCCCC TGGCGGCGGC chr3L:14356635-14356755 66 4.26e-05 CATTGTCTTG GCGCCCCC TGGCGGGCGT chr2L:10626057-10626177 68 4.26e-05 GAAGCAGGTG GCGCCCCC AGCGGCTGAC chr3L:13271405-13271525 75 4.26e-05 CAATTGGCAA GCGCCCCC TGGCGGCCAC chr3L:11315321-11315441 53 4.26e-05 ACCGCCCGTG GCGCCCCC TAGCGGTGAC chr2R:17141498-17141618 53 4.26e-05 CTACGGGGTG GCGCCCCC TAGCGACACA chr2L:14211495-14211615 59 4.26e-05 GGGTGCTGTG GCGCCCCC TGGCGTTGAA chr3L:17383854-17383974 58 5.68e-05 CGCACCAGTG GCGCCCTC TAGCACCGCT chr3R:27843922-27844042 76 5.68e-05 AGCAGCAGTA GCGCCCTC TGTCGGCCGT chr3R:19271277-19271397 33 5.68e-05 AAGATGAGCA GCGCCCTC TGTTGTGTAA chr2L:9067237-9067357 86 5.68e-05 AGCAACTTGA GCGCCCTC TGGCGACCAG chrX:17472591-17472711 70 5.68e-05 GAGCACAATG GCGCCCTC TGGCGGCATG chrX:18980528-18980648 43 5.68e-05 TAGTGCGGTG GCGCCCTC TGGCGGCGCG chrX:5957171-5957291 70 5.68e-05 CGCTTTAGTG GCGCCCTC TGTTGTGCTA chr3R:11394038-11394158 40 5.68e-05 CCGAACCCTA GCGCCCTC TGGTGGGAGT chr2R:12747054-12747174 48 5.68e-05 CGCAGCAGCA GCGCCCTC TGCCGGCCCG chr2L:10603760-10603880 39 5.68e-05 CTGCCATGTG GCGCCCTC TGTCGGACGA chr3L:4913788-4913908 22 7.07e-05 AAGCTAGAGG GCGCCAGC TATACGTCGG chr2L:12374695-12374815 54 7.07e-05 CCGCTAGGGG GCGCCAGC AGAGCAATTT chr3L:5125341-5125461 74 7.07e-05 CCGCTAGATG GCGCCAGC ACGTGCTCCG chr3R:11395678-11395798 76 7.07e-05 GACAGCACTT GCGCCAGC CTTCAGCCAC chr3R:4632782-4632902 108 7.07e-05 AGCGAGTTCC GCGCCAGC TGCCG chr2L:8024487-8024607 33 7.07e-05 CCAACAGATG GCGCCAGC TCAGCAGTAT chrX:12306690-12306810 59 7.07e-05 CCGCCAGGTG GCGCCAGC TAATCTGTAA chrX:6128855-6128975 80 8.55e-05 GGATCGGTAG ACGCCACC TGGTGGTCAT chrX:5187269-5187389 76 8.55e-05 GCCGCAAGGG ACGCCACC TAACGGGCAC chr3R:11544290-11544410 50 8.55e-05 TGTAATTGAC ACGCCACC TAGCGGCCAT chr2L:15439081-15439201 87 8.55e-05 CGAGCACTAG ACGCCACC TAGCGAGCGA chrX:2684610-2684730 22 8.55e-05 GGTATGTGTA ACGCCACC TGTGGGCCAC chrX:19811182-19811302 63 1.01e-04 CCGCAACGCA ACGCCATC TGTTGGCCAG chr2L:887929-888049 29 1.01e-04 CACGCCCCCG ACGCCATC TAGCGGCCAG chrX:868574-868694 42 1.01e-04 GACGACGAAG ACGCCATC TGGCGTGGGT chr3L:3596480-3596600 63 1.01e-04 TCACGAAAAG ACGCCATC TGGCGGGGGG chr3R:25876758-25876878 79 1.01e-04 CGCGTCAATG ACGCCATC TGGCGGCAAG chr2L:6173132-6173252 48 1.01e-04 CCACGTCAAC ACGCCATC TACCGCAGAA chr3L:13146643-13146763 38 1.01e-04 ATGCAAGTGC ACGCCATC TGGTGGTGGT chr3R:28317297-28317417 29 1.01e-04 CGGCACACAC ACGCCATC TGCCGGCCCG chr3L:4978164-4978284 102 1.15e-04 ACACTAGGGG GCGCCACT CGGGGCGGAG chrX:22544803-22544923 59 1.15e-04 CCGACAGAGG GCGCCACT ATCTCAACTG chr3R:19103304-19103424 88 1.15e-04 CCACCTGGCG GCGCCACT CGGTACTAAT chrX:18838630-18838750 30 1.15e-04 CATCTAGATG GCGCCACT GTGTCGCCCA chr2R:7123449-7123569 43 1.15e-04 CGCATAGAGG GCGCCACT TACGCCCCGG chr3L:20580746-20580866 82 1.15e-04 TGCATAGGTG GCGCCACT CACTCACGCA chr2R:23220460-23220580 57 1.15e-04 ACACTTGAGG GCGCCACT GTGCGTGGCC chr2L:17958456-17958576 26 1.58e-04 GTGCACTCTA GCTCCACC TACCGGCAGT chr3L:4776563-4776683 56 1.58e-04 CTGATTTGTG GCTCCACC TGGCGGGCGG chr3R:20347022-20347142 30 1.58e-04 CCCCACATCC GCTCCACC CCTTAACTTG chrX:15203797-15203917 7 1.58e-04 CAACTG GCTCCACC TGGCGGTGGC chr2L:20576078-20576198 66 1.58e-04 TGTCACTCGA GCTCCACC TAGCGGCGGG chr3R:22965370-22965490 14 1.58e-04 ATCTGCTGCA GCTCCACC TGGCGGAGAT chr3L:18842378-18842498 55 1.87e-04 CGTTAGCCAG GCGACACC TGAAGGTAAT chr3L:17292317-17292437 103 1.87e-04 TCGCCAGGGG GCGCCACA TCAAATGGTC chr2R:20305553-20305673 57 1.87e-04 AGCAATATAA GCGACACC TAGCGCCTGT chr3L:17208753-17208873 33 1.87e-04 TCCTACGCGG GCGACACC TAGCGTGCGC chrX:5607804-5607924 29 1.87e-04 CCGCAAGATG GCGCCACA TCAAATGCAC chr2L:18294522-18294642 90 1.87e-04 CCGCTAGGTG GCGACACC GTGCAGACAA chr3R:20066566-20066686 46 2.17e-04 TTGCACACGT GCTCCATC TGTTGGCGGT chr3L:4072822-4072942 30 2.17e-04 GGGCTTCTCT GCTCCATC GGGAAACGTT chr2L:1902364-1902484 88 2.17e-04 AGCGACAAAC ACGCCCCC TGTGGGCGCG chr2L:12373742-12373862 59 2.17e-04 TCAGCGAACA ACGCCCCC TATCGGGCAA chr2R:9677296-9677416 54 2.31e-04 CTTACAAGAG CCGCCACC TATCGGCGGC chr2R:21800245-21800365 19 2.61e-04 TTTTGCATGT GCGACATC TTGCGGTCAT chr3R:17616666-17616786 70 2.61e-04 CTTTTGCGTA GCGACATC TACGTCGTGT chr3L:5957296-5957416 80 2.61e-04 ACGCCAGAGG GCGCCATA AATCGATTAA chr2R:19528720-19528840 62 2.76e-04 GTGTAGAACA ACGCCCTC TGTTGGGCAG chr2L:17195328-17195448 37 2.76e-04 TCCGTCGACC ACGCCCTC TACCGGCAGC chr3R:27477642-27477762 49 2.76e-04 AGCGAGCGCC ACGCCCTC TGTTGGCGAA chr3L:5905847-5905967 17 3.19e-04 CTACTGACCA GCGCCGCC ACACGGCCGC chr3L:21090319-21090439 89 3.19e-04 CGGCTGTCAC GCGCCGCC AGATGGCGCT chr3L:16632285-16632405 42 3.19e-04 CCATGCACAT CCGCCATC TAGCGACTGC chr3R:13872321-13872441 59 3.61e-04 TGAGTAACTG GCGCCGTC TGTTGGCCAT chr3R:15632586-15632706 108 3.90e-04 CAAGTTTGCA GCGCCCTT AGCAG chr2R:9678015-9678135 111 4.19e-04 CCAGCAGGGG GCGCCAGT GA chr2R:23235099-23235219 67 4.19e-04 CCGCTAGATG GCGCCAGT CAAGGCGTCA chr3R:26432672-26432792 85 4.47e-04 GAGTTCATTG GCGACCCC ACCAGGCCTT chr3R:5927988-5928108 61 4.76e-04 CTCCGTAGAA GAGCCACC TGGCGTTAAA chr2R:15783185-15783305 51 4.76e-04 GCGCCAGGTG GAGCCACC GCTAAAGGAT chr3L:18161295-18161415 94 5.92e-04 CCGCTTGCTG GCGCCAGA GGGCGCTGCA chrX:13224991-13225111 61 5.92e-04 CCGCCAGAGG GCGCCAGA GTGTGTGGTG chr3L:18916595-18916715 80 5.92e-04 CCGCTAGATG GCGCCAGA TAATGATTAA chrX:20583443-20583563 35 6.52e-04 ATCTTGAAAG ACGCCCGC TAAATGACGG chr3R:9196002-9196122 29 6.52e-04 TGCCCACACA CCGCCCTC TATCGGTGAA chr2L:17650912-17651032 109 6.52e-04 TGTGCTGCCG CCGCCCTC GTAC chr3R:29553305-29553425 84 6.52e-04 TGGCACAGTG CCGCCCTC TGTGGGGCGG chrX:7593213-7593333 24 6.80e-04 CCGATAGGTG GCGCCACG ATCATTTGGG chr3R:24477590-24477710 32 7.24e-04 GAAATTGCCA ACGCcaca cacacacaca chrX:20386018-20386138 56 7.24e-04 AACATAGATG GCGGCCCC AAACCTTCTT chr2L:19682690-19682810 67 8.41e-04 GTGATGTCTT GCTCCACT TCCTTTGGAA chr3L:17237093-17237213 59 8.55e-04 AAGTTAACTG GCGGCAGC AACAAACACG chrX:7744084-7744204 68 8.55e-04 TGTGAAATGT GCGGCAGC GTGAGCAGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:10326384-10326504 1.4e-05 56_[+1]_56 chrX:2803926-2804046 1.4e-05 22_[+1]_90 chr2R:16462388-16462508 1.4e-05 31_[+1]_81 chrX:14712622-14712742 1.4e-05 40_[+1]_72 chr3L:16705767-16705887 1.4e-05 47_[+1]_65 chr3R:9673362-9673482 1.4e-05 21_[+1]_91 chrX:18254615-18254735 1.4e-05 23_[+1]_89 chr3L:19328192-19328312 1.4e-05 108_[+1]_4 chr2R:17214369-17214489 1.4e-05 84_[+1]_28 chr3R:5527720-5527840 1.4e-05 6_[+1]_106 chrX:2814579-2814699 1.4e-05 37_[+1]_75 chr3L:10199798-10199918 1.4e-05 35_[+1]_77 chr3L:3702663-3702783 1.4e-05 65_[+1]_47 chr3L:17153627-17153747 1.4e-05 37_[+1]_75 chr2R:13746453-13746573 1.4e-05 89_[+1]_23 chr3R:23397049-23397169 1.4e-05 42_[+1]_70 chr3R:23167814-23167934 1.4e-05 49_[+1]_63 chrX:2811200-2811320 1.4e-05 36_[+1]_76 chr3R:30770829-30770949 1.4e-05 78_[+1]_34 chr3R:3888896-3889016 1.4e-05 43_[+1]_69 chr2R:22462877-22462997 1.4e-05 40_[+1]_72 chr2L:19415323-19415443 1.4e-05 38_[+1]_74 chrX:20105119-20105239 1.4e-05 71_[+1]_41 chr2L:12880602-12880722 1.4e-05 41_[+1]_71 chr3L:14420149-14420269 1.4e-05 75_[+1]_37 chr2L:19246009-19246129 1.4e-05 7_[+1]_105 chr2R:17692450-17692570 1.4e-05 41_[+1]_71 chr3R:30990083-30990203 1.4e-05 48_[+1]_64 chr2L:18348101-18348221 1.4e-05 34_[+1]_78 chr2L:18516495-18516615 1.4e-05 79_[+1]_33 chr3L:22214859-22214979 1.4e-05 73_[+1]_39 chr3R:8456603-8456723 1.4e-05 56_[+1]_56 chr2L:15783120-15783240 1.4e-05 71_[+1]_41 chr2R:22364384-22364504 1.4e-05 48_[+1]_64 chr3L:12380745-12380865 1.4e-05 32_[+1]_80 chr2R:8623359-8623479 1.4e-05 78_[+1]_34 chr2L:15903874-15903994 1.4e-05 47_[+1]_65 chr3R:8389781-8389901 1.4e-05 59_[+1]_53 chr2L:7953486-7953606 1.4e-05 65_[+1]_47 chr3L:7941657-7941777 2.9e-05 78_[+1]_34 chrX:5588600-5588720 2.9e-05 55_[+1]_57 chrX:6550220-6550340 2.9e-05 74_[+1]_38 chr2L:19309178-19309298 2.9e-05 40_[+1]_72 chrX:7422728-7422848 2.9e-05 20_[+1]_92 chr3R:30294738-30294858 2.9e-05 41_[+1]_71 chr3L:20464817-20464937 2.9e-05 34_[+1]_78 chr2R:10923851-10923971 2.9e-05 55_[+1]_57 chr2L:17163458-17163578 2.9e-05 86_[+1]_26 chrX:3123711-3123831 2.9e-05 46_[+1]_66 chr3L:684203-684323 2.9e-05 31_[+1]_81 chr2R:15578904-15579024 2.9e-05 46_[+1]_66 chrX:16624669-16624789 2.9e-05 52_[+1]_60 chr2L:14112336-14112456 2.9e-05 31_[+1]_81 chr3L:5820949-5821069 2.9e-05 32_[+1]_80 chr3L:11853047-11853167 2.9e-05 72_[+1]_40 chr3L:14365572-14365692 2.9e-05 62_[+1]_50 chr3L:15366452-15366572 2.9e-05 38_[+1]_74 chr3R:31181978-31182098 2.9e-05 19_[+1]_93 chr2L:13540859-13540979 2.9e-05 24_[+1]_88 chrX:11320045-11320165 2.9e-05 65_[+1]_47 chr3L:14461188-14461308 2.9e-05 98_[+1]_14 chr2R:8340282-8340402 2.9e-05 66_[+1]_46 chrX:19585276-19585396 2.9e-05 82_[+1]_30 chr2R:22133994-22134114 2.9e-05 42_[+1]_70 chrX:12540907-12541027 2.9e-05 71_[+1]_41 chr2L:5036247-5036367 2.9e-05 89_[+1]_23 chr2L:8185162-8185282 2.9e-05 15_[+1]_97 chr2L:17201920-17202040 4.3e-05 43_[+1]_69 chr2R:9470975-9471095 4.3e-05 79_[+1]_33 chr2R:11053869-11053989 4.3e-05 60_[+1]_52 chr3L:20622323-20622443 4.3e-05 65_[+1]_47 chr3R:24503767-24503887 4.3e-05 30_[+1]_82 chr2R:24840675-24840795 4.3e-05 40_[+1]_72 chrX:12292595-12292715 4.3e-05 47_[+1]_65 chr3L:14356635-14356755 4.3e-05 65_[+1]_47 chr2L:10626057-10626177 4.3e-05 67_[+1]_45 chr3L:13271405-13271525 4.3e-05 74_[+1]_38 chr3L:11315321-11315441 4.3e-05 52_[+1]_60 chr2R:17141498-17141618 4.3e-05 52_[+1]_60 chr2L:14211495-14211615 4.3e-05 58_[+1]_54 chr3L:17383854-17383974 5.7e-05 57_[+1]_55 chr3R:27843922-27844042 5.7e-05 75_[+1]_37 chr3R:19271277-19271397 5.7e-05 32_[+1]_80 chr2L:9067237-9067357 5.7e-05 85_[+1]_27 chrX:17472591-17472711 5.7e-05 69_[+1]_43 chrX:18980528-18980648 5.7e-05 42_[+1]_70 chrX:5957171-5957291 5.7e-05 69_[+1]_43 chr3R:11394038-11394158 5.7e-05 39_[+1]_73 chr2R:12747054-12747174 5.7e-05 47_[+1]_65 chr2L:10603760-10603880 5.7e-05 38_[+1]_74 chr3L:4913788-4913908 7.1e-05 21_[+1]_91 chr2L:12374695-12374815 7.1e-05 53_[+1]_59 chr3L:5125341-5125461 7.1e-05 73_[+1]_39 chr3R:11395678-11395798 7.1e-05 75_[+1]_37 chr3R:4632782-4632902 7.1e-05 107_[+1]_5 chr2L:8024487-8024607 7.1e-05 32_[+1]_80 chrX:12306690-12306810 7.1e-05 58_[+1]_54 chrX:6128855-6128975 8.5e-05 79_[+1]_33 chrX:5187269-5187389 8.5e-05 75_[+1]_37 chr3R:11544290-11544410 8.5e-05 49_[+1]_63 chr2L:15439081-15439201 8.5e-05 86_[+1]_26 chrX:2684610-2684730 8.5e-05 21_[+1]_91 chrX:19811182-19811302 0.0001 62_[+1]_50 chr2L:887929-888049 0.0001 28_[+1]_84 chrX:868574-868694 0.0001 41_[+1]_71 chr3L:3596480-3596600 0.0001 62_[+1]_50 chr3R:25876758-25876878 0.0001 78_[+1]_34 chr2L:6173132-6173252 0.0001 47_[+1]_65 chr3L:13146643-13146763 0.0001 37_[+1]_75 chr3R:28317297-28317417 0.0001 28_[+1]_84 chr3L:4978164-4978284 0.00012 101_[+1]_11 chrX:22544803-22544923 0.00012 58_[+1]_54 chr3R:19103304-19103424 0.00012 87_[+1]_25 chrX:18838630-18838750 0.00012 29_[+1]_83 chr2R:7123449-7123569 0.00012 42_[+1]_70 chr3L:20580746-20580866 0.00012 81_[+1]_31 chr2R:23220460-23220580 0.00012 56_[+1]_56 chr2L:17958456-17958576 0.00016 25_[+1]_87 chr3L:4776563-4776683 0.00016 55_[+1]_57 chr3R:20347022-20347142 0.00016 29_[+1]_83 chrX:15203797-15203917 0.00016 6_[+1]_106 chr2L:20576078-20576198 0.00016 65_[+1]_47 chr3R:22965370-22965490 0.00016 13_[+1]_99 chr3L:18842378-18842498 0.00019 54_[+1]_58 chr3L:17292317-17292437 0.00019 102_[+1]_10 chr2R:20305553-20305673 0.00019 56_[+1]_56 chr3L:17208753-17208873 0.00019 32_[+1]_80 chrX:5607804-5607924 0.00019 28_[+1]_84 chr2L:18294522-18294642 0.00019 89_[+1]_23 chr3R:20066566-20066686 0.00022 45_[+1]_67 chr3L:4072822-4072942 0.00022 29_[+1]_83 chr2L:1902364-1902484 0.00022 87_[+1]_25 chr2L:12373742-12373862 0.00022 58_[+1]_54 chr2R:9677296-9677416 0.00023 53_[+1]_59 chr2R:21800245-21800365 0.00026 18_[+1]_94 chr3R:17616666-17616786 0.00026 69_[+1]_43 chr3L:5957296-5957416 0.00026 79_[+1]_33 chr2R:19528720-19528840 0.00028 61_[+1]_51 chr2L:17195328-17195448 0.00028 36_[+1]_76 chr3R:27477642-27477762 0.00028 48_[+1]_64 chr3L:5905847-5905967 0.00032 16_[+1]_96 chr3L:21090319-21090439 0.00032 88_[+1]_24 chr3L:16632285-16632405 0.00032 41_[+1]_71 chr3R:13872321-13872441 0.00036 58_[+1]_54 chr3R:15632586-15632706 0.00039 107_[+1]_5 chr2R:9678015-9678135 0.00042 110_[+1]_2 chr2R:23235099-23235219 0.00042 66_[+1]_46 chr3R:26432672-26432792 0.00045 84_[+1]_28 chr3R:5927988-5928108 0.00048 60_[+1]_52 chr2R:15783185-15783305 0.00048 50_[+1]_62 chr3L:18161295-18161415 0.00059 93_[+1]_19 chrX:13224991-13225111 0.00059 60_[+1]_52 chr3L:18916595-18916715 0.00059 79_[+1]_33 chrX:20583443-20583563 0.00065 34_[+1]_78 chr3R:9196002-9196122 0.00065 28_[+1]_84 chr2L:17650912-17651032 0.00065 108_[+1]_4 chr3R:29553305-29553425 0.00065 83_[+1]_29 chrX:7593213-7593333 0.00068 23_[+1]_89 chr3R:24477590-24477710 0.00072 31_[+1]_81 chrX:20386018-20386138 0.00072 55_[+1]_57 chr2L:19682690-19682810 0.00084 66_[+1]_46 chr3L:17237093-17237213 0.00086 58_[+1]_54 chrX:7744084-7744204 0.00086 67_[+1]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCGCCAYC width=8 seqs=163 chr2R:10326384-10326504 ( 57) GCGCCACC 1 chrX:2803926-2804046 ( 23) GCGCCACC 1 chr2R:16462388-16462508 ( 32) GCGCCACC 1 chrX:14712622-14712742 ( 41) GCGCCACC 1 chr3L:16705767-16705887 ( 48) GCGCCACC 1 chr3R:9673362-9673482 ( 22) GCGCCACC 1 chrX:18254615-18254735 ( 24) GCGCCACC 1 chr3L:19328192-19328312 ( 109) GCGCCACC 1 chr2R:17214369-17214489 ( 85) GCGCCACC 1 chr3R:5527720-5527840 ( 7) GCGCCACC 1 chrX:2814579-2814699 ( 38) GCGCCACC 1 chr3L:10199798-10199918 ( 36) GCGCCACC 1 chr3L:3702663-3702783 ( 66) GCGCCACC 1 chr3L:17153627-17153747 ( 38) GCGCCACC 1 chr2R:13746453-13746573 ( 90) GCGCCACC 1 chr3R:23397049-23397169 ( 43) GCGCCACC 1 chr3R:23167814-23167934 ( 50) GCGCCACC 1 chrX:2811200-2811320 ( 37) GCGCCACC 1 chr3R:30770829-30770949 ( 79) GCGCCACC 1 chr3R:3888896-3889016 ( 44) GCGCCACC 1 chr2R:22462877-22462997 ( 41) GCGCCACC 1 chr2L:19415323-19415443 ( 39) GCGCCACC 1 chrX:20105119-20105239 ( 72) GCGCCACC 1 chr2L:12880602-12880722 ( 42) GCGCCACC 1 chr3L:14420149-14420269 ( 76) GCGCCACC 1 chr2L:19246009-19246129 ( 8) GCGCCACC 1 chr2R:17692450-17692570 ( 42) GCGCCACC 1 chr3R:30990083-30990203 ( 49) GCGCCACC 1 chr2L:18348101-18348221 ( 35) GCGCCACC 1 chr2L:18516495-18516615 ( 80) GCGCCACC 1 chr3L:22214859-22214979 ( 74) GCGCCACC 1 chr3R:8456603-8456723 ( 57) GCGCCACC 1 chr2L:15783120-15783240 ( 72) GCGCCACC 1 chr2R:22364384-22364504 ( 49) GCGCCACC 1 chr3L:12380745-12380865 ( 33) GCGCCACC 1 chr2R:8623359-8623479 ( 79) GCGCCACC 1 chr2L:15903874-15903994 ( 48) GCGCCACC 1 chr3R:8389781-8389901 ( 60) GCGCCACC 1 chr2L:7953486-7953606 ( 66) GCGCCACC 1 chr3L:7941657-7941777 ( 79) GCGCCATC 1 chrX:5588600-5588720 ( 56) GCGCCATC 1 chrX:6550220-6550340 ( 75) GCGCCATC 1 chr2L:19309178-19309298 ( 41) GCGCCATC 1 chrX:7422728-7422848 ( 21) GCGCCATC 1 chr3R:30294738-30294858 ( 42) GCGCCATC 1 chr3L:20464817-20464937 ( 35) GCGCCATC 1 chr2R:10923851-10923971 ( 56) GCGCCATC 1 chr2L:17163458-17163578 ( 87) GCGCCATC 1 chrX:3123711-3123831 ( 47) GCGCCATC 1 chr3L:684203-684323 ( 32) GCGCCATC 1 chr2R:15578904-15579024 ( 47) GCGCCATC 1 chrX:16624669-16624789 ( 53) GCGCCATC 1 chr2L:14112336-14112456 ( 32) GCGCCATC 1 chr3L:5820949-5821069 ( 33) GCGCCATC 1 chr3L:11853047-11853167 ( 73) GCGCCATC 1 chr3L:14365572-14365692 ( 63) GCGCCATC 1 chr3L:15366452-15366572 ( 39) GCGCCATC 1 chr3R:31181978-31182098 ( 20) GCGCCATC 1 chr2L:13540859-13540979 ( 25) GCGCCATC 1 chrX:11320045-11320165 ( 66) GCGCCATC 1 chr3L:14461188-14461308 ( 99) GCGCCATC 1 chr2R:8340282-8340402 ( 67) GCGCCATC 1 chrX:19585276-19585396 ( 83) GCGCCATC 1 chr2R:22133994-22134114 ( 43) GCGCCATC 1 chrX:12540907-12541027 ( 72) GCGCCATC 1 chr2L:5036247-5036367 ( 90) GCGCCATC 1 chr2L:8185162-8185282 ( 16) GCGCCATC 1 chr2L:17201920-17202040 ( 44) GCGCCCCC 1 chr2R:9470975-9471095 ( 80) GCGCCCCC 1 chr2R:11053869-11053989 ( 61) GCGCCCCC 1 chr3L:20622323-20622443 ( 66) GCGCCCCC 1 chr3R:24503767-24503887 ( 31) GCGCCCCC 1 chr2R:24840675-24840795 ( 41) GCGCCCCC 1 chrX:12292595-12292715 ( 48) GCGCCCCC 1 chr3L:14356635-14356755 ( 66) GCGCCCCC 1 chr2L:10626057-10626177 ( 68) GCGCCCCC 1 chr3L:13271405-13271525 ( 75) GCGCCCCC 1 chr3L:11315321-11315441 ( 53) GCGCCCCC 1 chr2R:17141498-17141618 ( 53) GCGCCCCC 1 chr2L:14211495-14211615 ( 59) GCGCCCCC 1 chr3L:17383854-17383974 ( 58) GCGCCCTC 1 chr3R:27843922-27844042 ( 76) GCGCCCTC 1 chr3R:19271277-19271397 ( 33) GCGCCCTC 1 chr2L:9067237-9067357 ( 86) GCGCCCTC 1 chrX:17472591-17472711 ( 70) GCGCCCTC 1 chrX:18980528-18980648 ( 43) GCGCCCTC 1 chrX:5957171-5957291 ( 70) GCGCCCTC 1 chr3R:11394038-11394158 ( 40) GCGCCCTC 1 chr2R:12747054-12747174 ( 48) GCGCCCTC 1 chr2L:10603760-10603880 ( 39) GCGCCCTC 1 chr3L:4913788-4913908 ( 22) GCGCCAGC 1 chr2L:12374695-12374815 ( 54) GCGCCAGC 1 chr3L:5125341-5125461 ( 74) GCGCCAGC 1 chr3R:11395678-11395798 ( 76) GCGCCAGC 1 chr3R:4632782-4632902 ( 108) GCGCCAGC 1 chr2L:8024487-8024607 ( 33) GCGCCAGC 1 chrX:12306690-12306810 ( 59) GCGCCAGC 1 chrX:6128855-6128975 ( 80) ACGCCACC 1 chrX:5187269-5187389 ( 76) ACGCCACC 1 chr3R:11544290-11544410 ( 50) ACGCCACC 1 chr2L:15439081-15439201 ( 87) ACGCCACC 1 chrX:2684610-2684730 ( 22) ACGCCACC 1 chrX:19811182-19811302 ( 63) ACGCCATC 1 chr2L:887929-888049 ( 29) ACGCCATC 1 chrX:868574-868694 ( 42) ACGCCATC 1 chr3L:3596480-3596600 ( 63) ACGCCATC 1 chr3R:25876758-25876878 ( 79) ACGCCATC 1 chr2L:6173132-6173252 ( 48) ACGCCATC 1 chr3L:13146643-13146763 ( 38) ACGCCATC 1 chr3R:28317297-28317417 ( 29) ACGCCATC 1 chr3L:4978164-4978284 ( 102) GCGCCACT 1 chrX:22544803-22544923 ( 59) GCGCCACT 1 chr3R:19103304-19103424 ( 88) GCGCCACT 1 chrX:18838630-18838750 ( 30) GCGCCACT 1 chr2R:7123449-7123569 ( 43) GCGCCACT 1 chr3L:20580746-20580866 ( 82) GCGCCACT 1 chr2R:23220460-23220580 ( 57) GCGCCACT 1 chr2L:17958456-17958576 ( 26) GCTCCACC 1 chr3L:4776563-4776683 ( 56) GCTCCACC 1 chr3R:20347022-20347142 ( 30) GCTCCACC 1 chrX:15203797-15203917 ( 7) GCTCCACC 1 chr2L:20576078-20576198 ( 66) GCTCCACC 1 chr3R:22965370-22965490 ( 14) GCTCCACC 1 chr3L:18842378-18842498 ( 55) GCGACACC 1 chr3L:17292317-17292437 ( 103) GCGCCACA 1 chr2R:20305553-20305673 ( 57) GCGACACC 1 chr3L:17208753-17208873 ( 33) GCGACACC 1 chrX:5607804-5607924 ( 29) GCGCCACA 1 chr2L:18294522-18294642 ( 90) GCGACACC 1 chr3R:20066566-20066686 ( 46) GCTCCATC 1 chr3L:4072822-4072942 ( 30) GCTCCATC 1 chr2L:1902364-1902484 ( 88) ACGCCCCC 1 chr2L:12373742-12373862 ( 59) ACGCCCCC 1 chr2R:9677296-9677416 ( 54) CCGCCACC 1 chr2R:21800245-21800365 ( 19) GCGACATC 1 chr3R:17616666-17616786 ( 70) GCGACATC 1 chr3L:5957296-5957416 ( 80) GCGCCATA 1 chr2R:19528720-19528840 ( 62) ACGCCCTC 1 chr2L:17195328-17195448 ( 37) ACGCCCTC 1 chr3R:27477642-27477762 ( 49) ACGCCCTC 1 chr3L:5905847-5905967 ( 17) GCGCCGCC 1 chr3L:21090319-21090439 ( 89) GCGCCGCC 1 chr3L:16632285-16632405 ( 42) CCGCCATC 1 chr3R:13872321-13872441 ( 59) GCGCCGTC 1 chr3R:15632586-15632706 ( 108) GCGCCCTT 1 chr2R:9678015-9678135 ( 111) GCGCCAGT 1 chr2R:23235099-23235219 ( 67) GCGCCAGT 1 chr3R:26432672-26432792 ( 85) GCGACCCC 1 chr3R:5927988-5928108 ( 61) GAGCCACC 1 chr2R:15783185-15783305 ( 51) GAGCCACC 1 chr3L:18161295-18161415 ( 94) GCGCCAGA 1 chrX:13224991-13225111 ( 61) GCGCCAGA 1 chr3L:18916595-18916715 ( 80) GCGCCAGA 1 chrX:20583443-20583563 ( 35) ACGCCCGC 1 chr3R:9196002-9196122 ( 29) CCGCCCTC 1 chr2L:17650912-17651032 ( 109) CCGCCCTC 1 chr3R:29553305-29553425 ( 84) CCGCCCTC 1 chrX:7593213-7593333 ( 24) GCGCCACG 1 chr3R:24477590-24477710 ( 32) ACGCCACA 1 chrX:20386018-20386138 ( 56) GCGGCCCC 1 chr2L:19682690-19682810 ( 67) GCTCCACT 1 chr3L:17237093-17237213 ( 59) GCGGCAGC 1 chrX:7744084-7744204 ( 68) GCGGCAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.70224 E= 3.3e-147 -105 -302 180 -1399 -437 199 -1399 -1399 -1399 -1399 195 -220 -256 192 -373 -1399 -1399 201 -1399 -1399 160 -21 -373 -1399 -1399 112 -141 54 -256 183 -531 -191 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 163 E= 3.3e-147 0.122699 0.030675 0.846626 0.000000 0.012270 0.987730 0.000000 0.000000 0.000000 0.000000 0.944785 0.055215 0.042945 0.938650 0.018405 0.000000 0.000000 1.000000 0.000000 0.000000 0.766871 0.214724 0.018405 0.000000 0.000000 0.539877 0.092025 0.368098 0.042945 0.883436 0.006135 0.067485 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCCAYC MEME-1 regular expression -------------------------------------------------------------------------------- GCGCC[AC][CT]C -------------------------------------------------------------------------------- Time 7.70 secs. ******************************************************************************** ******************************************************************************** MOTIF AGRTGGCG MEME-2 width = 8 sites = 72 llr = 681 E-value = 3.7e-066 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 Description -------------------------------------------------------------------------------- Simplified A a:5:::1: pos.-specific C ::::::9: probability G :a51aa:a matrix T :::9:::: bits 2.0 * ** * 1.8 * ** * 1.6 ** ** * 1.4 ** ***** Relative 1.2 ** ***** Entropy 1.0 ** ***** (13.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGGTGGCG consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:12803599-12803719 65 1.38e-05 GCAGGCCGAA AGGTGGCG CTCTACCAAT chr2L:18765518-18765638 73 1.38e-05 TGCATCCGAC AGGTGGCG TGCATCCGCT chr3L:20999779-20999899 65 1.38e-05 TGGAGGCACC AGGTGGCG CTTGTGGGCA chr3L:24054623-24054743 55 1.38e-05 TTCGGCCGCC AGGTGGCG TGATCGAACC chr3R:19774335-19774455 87 1.38e-05 ACACGCAAGG AGGTGGCG CATCACCGAA chr3L:5905847-5905967 104 1.38e-05 ATCTGGGCAT AGGTGGCG TACTTGTCG chr2L:3179812-3179932 28 1.38e-05 AGCAGCCAGC AGGTGGCG CTTTGGTGGT chr2L:3035095-3035215 77 1.38e-05 GTTCGCCTGC AGGTGGCG CTTGCGTATG chr2L:19682690-19682810 44 1.38e-05 AACCACCACT AGGTGGCG CTTTTGTGAT chr2L:18284304-18284424 41 1.38e-05 ACTGCCCCAC AGGTGGCG CTTTAATTTG chr2L:6584473-6584593 87 1.38e-05 CTGCTCCGGC AGGTGGCG CACCTGTCGG chr2R:13746453-13746573 48 1.38e-05 TTTCCACGCC AGGTGGCG TTGCGGAGGC chr2R:12097603-12097723 62 1.38e-05 AACAGACGCC AGgtggcg cgttggtggt chr2R:8411392-8411512 95 1.38e-05 GTTGACCACC AGGTGGCG TGGCATCTTC chr3R:17970994-17971114 60 1.38e-05 TTTGGCCACT AGGTGGCG CGCGTCAGAC chrX:14585421-14585541 50 1.38e-05 CCCGACCGCC AGGTGGCG CTCTAGTCGC chr2R:22462877-22462997 113 1.38e-05 AGTGGAGATT AGGTGGCG chr2R:12847388-12847508 17 1.38e-05 CTTGAGATAT AGGTGGCG TTTTACGTCA chr3R:10538919-10539039 85 1.38e-05 GATGGCCGGA AGGTGGCG CTGCTGCAGC chr2L:19634164-19634284 58 1.38e-05 AACTGCCGCT AGGTGGCG TTGGTGTGCC chr3L:7560718-7560838 71 1.38e-05 TTCGCCCGAT AGGTGGCG TGCATTCGCT chrX:7466460-7466580 108 1.38e-05 AATAGCAGCT AGGTGGCG TTTTG chr2R:13340253-13340373 85 1.38e-05 CACCGCCGCC AGGTGGCG CTTTGCCGGC chr2R:12843801-12843921 64 1.38e-05 CGCCTCCGCC AGGTGGCG CTTAAGCATC chr2R:17142191-17142311 86 1.38e-05 TCGGGCCCCT AGGTGGCG CTGCCTCGAC chr2L:6391600-6391720 74 2.82e-05 TCCGCCCACC AGATGGCG GGGCAGGAGT chr3R:19657380-19657500 49 2.82e-05 AACCGCCGCT AGATGGCG CTAGTGGCCA chr3L:12949534-12949654 31 2.82e-05 CTTCAACGCC AGATGGCG CTAATGAACT chrX:12353603-12353723 28 2.82e-05 GCTGGCCGGT AGATGGCG CTGTCGTGTG chr3R:20347022-20347142 101 2.82e-05 GGTTGCCGCT AGATGGCG CCAATCAACA chr2L:7097553-7097673 10 2.82e-05 TGCGTCGGT AGATGGCG CTATCTCCTC chr3R:24386589-24386709 38 2.82e-05 ATCTGCCTGT AGATGGCG CTTCTCGACC chr3L:21090319-21090439 97 2.82e-05 ACGCGCCGCC AGATGGCG CTCATCGTAC chr3L:10078694-10078814 72 2.82e-05 AAACATCGCT AGATGGCG CTATTTCAAC chr2R:12234295-12234415 68 2.82e-05 AACCTCCGGC AGATGGCG TGTGCCGTGG chr2R:9611537-9611657 71 2.82e-05 TTTGTCCAAT AGATGGCG CAAGTGTGCC chr3R:26432672-26432792 63 2.82e-05 AGCTGCCGAT AGATGGCG CTACGAGTTC chr3L:20138464-20138584 66 2.82e-05 TTGGCCCGAC AGATGGCG CTGCACGCCA chr3R:9956873-9956993 36 2.82e-05 ACCGCACGCT AGATGGCG TGTTGGCGCG chrX:19585276-19585396 50 2.82e-05 TCACTTCGAT AGATGGCG CCTGCAGCAC chr2R:22133994-22134114 84 2.82e-05 CATGACCAAC AGATGGCG TAGCTTAGGA chrX:3815814-3815934 30 2.82e-05 ATTGTCCGTC AGATGGCG CGGCGCGTCT chr2R:14446974-14447094 70 2.82e-05 AATGGCCGCA AGATGGCG CTAGTCGGAT chr2R:14653904-14654024 70 2.82e-05 CCCGGCCGAC AGATGGCG CTATTCACTC chr3R:27098761-27098881 96 2.82e-05 TTTGTCCAGC AGATGGCG CGCGGAACAG chr2L:3183299-3183419 78 2.82e-05 ACTCGCCGCT AGATGGCG CCTGGGCCGC chr3L:15011282-15011402 56 2.82e-05 TTGATCCGCT AGATGGCG CATGCCGATG chr2L:5036247-5036367 62 2.82e-05 GCTTTCCAGC AGATGGCG CACGTTCCAA chr3L:1041528-1041648 103 2.82e-05 CGCGGCCGAC AGATGGCG CTGCtgtgcg chr2R:23114576-23114696 78 2.82e-05 GTCAGCCAAC AGATGGCG TTGCGTAGGA chr3R:22810408-22810528 55 4.15e-05 GAACGACTGT AGGGGGCG TTGCGCAACG chr2R:23108192-23108312 30 4.15e-05 TTTTCCCACC AGGGGGCG TATTCGCTTT chr3R:4632782-4632902 51 4.15e-05 ATATCCTTCC AGGGGGCG CCACTTATGA chr3R:15632586-15632706 47 4.15e-05 ATTGTCCGCA AGGGGGCG CTGTATTAGC chr3L:5201910-5202030 62 5.54e-05 CTTGGCCGCC AGAGGGCG TTAGCCATGG chr3R:19245548-19245668 53 5.54e-05 TATCGACGCC AGAGGGCG CAGGCAAGAC chrX:5187269-5187389 24 5.54e-05 GGTGGCCAAC AGAGGGCG CTGGTCCATG chr3L:18916595-18916715 54 5.54e-05 AAATGACCTC AGAGGGCG GGAAGCAGCC chr3R:31181978-31182098 36 5.54e-05 TCTGGCGTGC AGAGGGCG CAGACGGACC chr2L:6301751-6301871 77 6.95e-05 AACAGCCGCA AGGTGGAG CTAGCATGCC chr2L:19270851-19270971 34 6.95e-05 CCCCACCGCT AGGTGGAG CTGATGTGTA chr2R:10162520-10162640 95 6.95e-05 TAACGCCGCT AGGTGGAG CTTGAGTGCA chr2L:17953399-17953519 90 6.95e-05 AGCCTCCGCT AGGTGGAG CCACTGTATC chr2R:9363426-9363546 42 6.95e-05 AATAACCACT AGGTGGAG CTCGTGTGCA chr2R:6718281-6718401 37 6.95e-05 AGCAACCGGT AGGTGGAG CTAATGTGCG chr2R:14447893-14448013 20 8.43e-05 TCCGTCCGCC AGATGGAG CCAGTCAGCC chrX:6128855-6128975 63 9.84e-05 GAATTCAATT AGCTGGCG GATCGGTAGA chrX:15353820-15353940 39 9.84e-05 CTTCAACGTC AGCTGGCG CTACGTATCC chrX:15203797-15203917 18 1.12e-04 CTCCACCTGG CGGTGGCG AGTCAGCGAA chr3L:17292317-17292437 21 1.26e-04 GAggcgatgg cgatggcg atggcgatgC chrX:12540907-12541027 37 1.26e-04 AATTTGAACA CGATGGCG CCAGTGGTCA chr2R:7287970-7288090 55 1.40e-04 TTCCTCCGCC AGGGGGAG CCACTCCACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:12803599-12803719 1.4e-05 64_[+2]_48 chr2L:18765518-18765638 1.4e-05 72_[+2]_40 chr3L:20999779-20999899 1.4e-05 64_[+2]_48 chr3L:24054623-24054743 1.4e-05 54_[+2]_58 chr3R:19774335-19774455 1.4e-05 86_[+2]_26 chr3L:5905847-5905967 1.4e-05 103_[+2]_9 chr2L:3179812-3179932 1.4e-05 27_[+2]_85 chr2L:3035095-3035215 1.4e-05 76_[+2]_36 chr2L:19682690-19682810 1.4e-05 43_[+2]_69 chr2L:18284304-18284424 1.4e-05 40_[+2]_72 chr2L:6584473-6584593 1.4e-05 86_[+2]_26 chr2R:13746453-13746573 1.4e-05 47_[+2]_65 chr2R:12097603-12097723 1.4e-05 61_[+2]_51 chr2R:8411392-8411512 1.4e-05 94_[+2]_18 chr3R:17970994-17971114 1.4e-05 59_[+2]_53 chrX:14585421-14585541 1.4e-05 49_[+2]_63 chr2R:22462877-22462997 1.4e-05 112_[+2] chr2R:12847388-12847508 1.4e-05 16_[+2]_96 chr3R:10538919-10539039 1.4e-05 84_[+2]_28 chr2L:19634164-19634284 1.4e-05 57_[+2]_55 chr3L:7560718-7560838 1.4e-05 70_[+2]_42 chrX:7466460-7466580 1.4e-05 107_[+2]_5 chr2R:13340253-13340373 1.4e-05 84_[+2]_28 chr2R:12843801-12843921 1.4e-05 63_[+2]_49 chr2R:17142191-17142311 1.4e-05 85_[+2]_27 chr2L:6391600-6391720 2.8e-05 73_[+2]_39 chr3R:19657380-19657500 2.8e-05 48_[+2]_64 chr3L:12949534-12949654 2.8e-05 30_[+2]_82 chrX:12353603-12353723 2.8e-05 27_[+2]_85 chr3R:20347022-20347142 2.8e-05 100_[+2]_12 chr2L:7097553-7097673 2.8e-05 9_[+2]_103 chr3R:24386589-24386709 2.8e-05 37_[+2]_75 chr3L:21090319-21090439 2.8e-05 96_[+2]_16 chr3L:10078694-10078814 2.8e-05 71_[+2]_41 chr2R:12234295-12234415 2.8e-05 67_[+2]_45 chr2R:9611537-9611657 2.8e-05 70_[+2]_42 chr3R:26432672-26432792 2.8e-05 62_[+2]_50 chr3L:20138464-20138584 2.8e-05 65_[+2]_47 chr3R:9956873-9956993 2.8e-05 35_[+2]_77 chrX:19585276-19585396 2.8e-05 49_[+2]_63 chr2R:22133994-22134114 2.8e-05 83_[+2]_29 chrX:3815814-3815934 2.8e-05 29_[+2]_83 chr2R:14446974-14447094 2.8e-05 69_[+2]_43 chr2R:14653904-14654024 2.8e-05 69_[+2]_43 chr3R:27098761-27098881 2.8e-05 95_[+2]_17 chr2L:3183299-3183419 2.8e-05 77_[+2]_35 chr3L:15011282-15011402 2.8e-05 55_[+2]_57 chr2L:5036247-5036367 2.8e-05 61_[+2]_51 chr3L:1041528-1041648 2.8e-05 102_[+2]_10 chr2R:23114576-23114696 2.8e-05 77_[+2]_35 chr3R:22810408-22810528 4.2e-05 54_[+2]_58 chr2R:23108192-23108312 4.2e-05 29_[+2]_83 chr3R:4632782-4632902 4.2e-05 50_[+2]_62 chr3R:15632586-15632706 4.2e-05 46_[+2]_66 chr3L:5201910-5202030 5.5e-05 61_[+2]_51 chr3R:19245548-19245668 5.5e-05 52_[+2]_60 chrX:5187269-5187389 5.5e-05 23_[+2]_89 chr3L:18916595-18916715 5.5e-05 53_[+2]_59 chr3R:31181978-31182098 5.5e-05 35_[+2]_77 chr2L:6301751-6301871 7e-05 76_[+2]_36 chr2L:19270851-19270971 7e-05 33_[+2]_79 chr2R:10162520-10162640 7e-05 94_[+2]_18 chr2L:17953399-17953519 7e-05 89_[+2]_23 chr2R:9363426-9363546 7e-05 41_[+2]_71 chr2R:6718281-6718401 7e-05 36_[+2]_76 chr2R:14447893-14448013 8.4e-05 19_[+2]_93 chrX:6128855-6128975 9.8e-05 62_[+2]_50 chrX:15353820-15353940 9.8e-05 38_[+2]_74 chrX:15203797-15203917 0.00011 17_[+2]_95 chr3L:17292317-17292437 0.00013 20_[+2]_92 chrX:12540907-12541027 0.00013 36_[+2]_76 chr2R:7287970-7288090 0.00014 54_[+2]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGRTGGCG width=8 seqs=72 chr2L:12803599-12803719 ( 65) AGGTGGCG 1 chr2L:18765518-18765638 ( 73) AGGTGGCG 1 chr3L:20999779-20999899 ( 65) AGGTGGCG 1 chr3L:24054623-24054743 ( 55) AGGTGGCG 1 chr3R:19774335-19774455 ( 87) AGGTGGCG 1 chr3L:5905847-5905967 ( 104) AGGTGGCG 1 chr2L:3179812-3179932 ( 28) AGGTGGCG 1 chr2L:3035095-3035215 ( 77) AGGTGGCG 1 chr2L:19682690-19682810 ( 44) AGGTGGCG 1 chr2L:18284304-18284424 ( 41) AGGTGGCG 1 chr2L:6584473-6584593 ( 87) AGGTGGCG 1 chr2R:13746453-13746573 ( 48) AGGTGGCG 1 chr2R:12097603-12097723 ( 62) AGGTGGCG 1 chr2R:8411392-8411512 ( 95) AGGTGGCG 1 chr3R:17970994-17971114 ( 60) AGGTGGCG 1 chrX:14585421-14585541 ( 50) AGGTGGCG 1 chr2R:22462877-22462997 ( 113) AGGTGGCG 1 chr2R:12847388-12847508 ( 17) AGGTGGCG 1 chr3R:10538919-10539039 ( 85) AGGTGGCG 1 chr2L:19634164-19634284 ( 58) AGGTGGCG 1 chr3L:7560718-7560838 ( 71) AGGTGGCG 1 chrX:7466460-7466580 ( 108) AGGTGGCG 1 chr2R:13340253-13340373 ( 85) AGGTGGCG 1 chr2R:12843801-12843921 ( 64) AGGTGGCG 1 chr2R:17142191-17142311 ( 86) AGGTGGCG 1 chr2L:6391600-6391720 ( 74) AGATGGCG 1 chr3R:19657380-19657500 ( 49) AGATGGCG 1 chr3L:12949534-12949654 ( 31) AGATGGCG 1 chrX:12353603-12353723 ( 28) AGATGGCG 1 chr3R:20347022-20347142 ( 101) AGATGGCG 1 chr2L:7097553-7097673 ( 10) AGATGGCG 1 chr3R:24386589-24386709 ( 38) AGATGGCG 1 chr3L:21090319-21090439 ( 97) AGATGGCG 1 chr3L:10078694-10078814 ( 72) AGATGGCG 1 chr2R:12234295-12234415 ( 68) AGATGGCG 1 chr2R:9611537-9611657 ( 71) AGATGGCG 1 chr3R:26432672-26432792 ( 63) AGATGGCG 1 chr3L:20138464-20138584 ( 66) AGATGGCG 1 chr3R:9956873-9956993 ( 36) AGATGGCG 1 chrX:19585276-19585396 ( 50) AGATGGCG 1 chr2R:22133994-22134114 ( 84) AGATGGCG 1 chrX:3815814-3815934 ( 30) AGATGGCG 1 chr2R:14446974-14447094 ( 70) AGATGGCG 1 chr2R:14653904-14654024 ( 70) AGATGGCG 1 chr3R:27098761-27098881 ( 96) AGATGGCG 1 chr2L:3183299-3183419 ( 78) AGATGGCG 1 chr3L:15011282-15011402 ( 56) AGATGGCG 1 chr2L:5036247-5036367 ( 62) AGATGGCG 1 chr3L:1041528-1041648 ( 103) AGATGGCG 1 chr2R:23114576-23114696 ( 78) AGATGGCG 1 chr3R:22810408-22810528 ( 55) AGGGGGCG 1 chr2R:23108192-23108312 ( 30) AGGGGGCG 1 chr3R:4632782-4632902 ( 51) AGGGGGCG 1 chr3R:15632586-15632706 ( 47) AGGGGGCG 1 chr3L:5201910-5202030 ( 62) AGAGGGCG 1 chr3R:19245548-19245668 ( 53) AGAGGGCG 1 chrX:5187269-5187389 ( 24) AGAGGGCG 1 chr3L:18916595-18916715 ( 54) AGAGGGCG 1 chr3R:31181978-31182098 ( 36) AGAGGGCG 1 chr2L:6301751-6301871 ( 77) AGGTGGAG 1 chr2L:19270851-19270971 ( 34) AGGTGGAG 1 chr2R:10162520-10162640 ( 95) AGGTGGAG 1 chr2L:17953399-17953519 ( 90) AGGTGGAG 1 chr2R:9363426-9363546 ( 42) AGGTGGAG 1 chr2R:6718281-6718401 ( 37) AGGTGGAG 1 chr2R:14447893-14448013 ( 20) AGATGGAG 1 chrX:6128855-6128975 ( 63) AGCTGGCG 1 chrX:15353820-15353940 ( 39) AGCTGGCG 1 chrX:15203797-15203917 ( 18) CGGTGGCG 1 chr3L:17292317-17292437 ( 21) CGATGGCG 1 chrX:12540907-12541027 ( 37) CGATGGCG 1 chr2R:7287970-7288090 ( 55) AGGGGGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.019 E= 3.7e-066 192 -257 -1281 -1281 -1281 -1281 204 -1281 85 -316 108 -1281 -1281 -1281 -81 176 -1281 -1281 204 -1281 -1281 -1281 204 -1281 -119 184 -1281 -1281 -1281 -1281 204 -1281 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 72 E= 3.7e-066 0.958333 0.041667 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.458333 0.027778 0.513889 0.000000 0.000000 0.000000 0.138889 0.861111 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.111111 0.888889 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTGGCG MEME-2 regular expression -------------------------------------------------------------------------------- AG[GA]TGGCG -------------------------------------------------------------------------------- Time 13.53 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCGGRSG MEME-3 width = 8 sites = 16 llr = 154 E-value = 1.3e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::6:: pos.-specific C ::a::16: probability G aa:aa34a matrix T :::::::: bits 2.0 ***** * 1.8 ***** * 1.6 ***** * 1.4 ***** * Relative 1.2 ***** * Entropy 1.0 ***** ** (13.9 bits) 0.8 ***** ** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGCGGACG consensus GG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:12803599-12803719 98 1.35e-05 TGCAAATGTT GGCGGACG ACAATGAGAA chr3L:4776563-4776683 69 1.35e-05 CCACCTGGCG GGCGGACG TTTACTTCAA chr2R:10326384-10326504 78 1.35e-05 TGCCGACCCA GGCGGACG ATAGGTGACC chr3R:11395678-11395798 56 1.35e-05 AGAGACACCT GGCGGACG CGGACAGCAC chr2L:19246009-19246129 17 1.35e-05 GGCGCCACCT GGCGGACG CCTGGCCAAG chr3L:4978164-4978284 113 2.68e-05 CGCCACTCGG GGCGGAGG chr2L:17163458-17163578 96 2.68e-05 GGCGCCATCT GGCGGAGG CTGGCTTGCA chr2R:8411392-8411512 31 2.68e-05 ACGTGACGCC GGCGGAGG CGTGTCAAGG chrX:2684610-2684730 59 2.68e-05 CAGCCAGCTG GGCGGAGG CGGAAAAGCC chr3L:11853047-11853167 82 3.98e-05 TGCGCCATCT GGCGGGCG CAAAAGTAGA chr3R:24503767-24503887 40 3.98e-05 AGCGCCCCCT GGCGGGCG TGCAATTAAG chr3L:14356635-14356755 75 3.98e-05 GGCGCCCCCT GGCGGGCG TTTCACCCAT chr3R:10501330-10501450 35 5.26e-05 GTCTCCACCT GGCGGGGG AGAAGGGTAC chr3L:3596480-3596600 72 5.26e-05 GACGCCATCT GGCGGGGG GAAACTTCGA chrX:12353603-12353723 47 6.57e-05 TGTCGTGTGC GGCGGCCG CTCAATTACA chrX:5187269-5187389 49 7.87e-05 ATGCCTCGCT GGCGGCGG CGACAGTGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:12803599-12803719 1.4e-05 97_[+3]_15 chr3L:4776563-4776683 1.4e-05 68_[+3]_44 chr2R:10326384-10326504 1.4e-05 77_[+3]_35 chr3R:11395678-11395798 1.4e-05 55_[+3]_57 chr2L:19246009-19246129 1.4e-05 16_[+3]_96 chr3L:4978164-4978284 2.7e-05 112_[+3] chr2L:17163458-17163578 2.7e-05 95_[+3]_17 chr2R:8411392-8411512 2.7e-05 30_[+3]_82 chrX:2684610-2684730 2.7e-05 58_[+3]_54 chr3L:11853047-11853167 4e-05 81_[+3]_31 chr3R:24503767-24503887 4e-05 39_[+3]_73 chr3L:14356635-14356755 4e-05 74_[+3]_38 chr3R:10501330-10501450 5.3e-05 34_[+3]_78 chr3L:3596480-3596600 5.3e-05 71_[+3]_41 chrX:12353603-12353723 6.6e-05 46_[+3]_66 chrX:5187269-5187389 7.9e-05 48_[+3]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCGGRSG width=8 seqs=16 chr2L:12803599-12803719 ( 98) GGCGGACG 1 chr3L:4776563-4776683 ( 69) GGCGGACG 1 chr2R:10326384-10326504 ( 78) GGCGGACG 1 chr3R:11395678-11395798 ( 56) GGCGGACG 1 chr2L:19246009-19246129 ( 17) GGCGGACG 1 chr3L:4978164-4978284 ( 113) GGCGGAGG 1 chr2L:17163458-17163578 ( 96) GGCGGAGG 1 chr2R:8411392-8411512 ( 31) GGCGGAGG 1 chrX:2684610-2684730 ( 59) GGCGGAGG 1 chr3L:11853047-11853167 ( 82) GGCGGGCG 1 chr3R:24503767-24503887 ( 40) GGCGGGCG 1 chr3L:14356635-14356755 ( 75) GGCGGGCG 1 chr3R:10501330-10501450 ( 35) GGCGGGGG 1 chr3L:3596480-3596600 ( 72) GGCGGGGG 1 chrX:12353603-12353723 ( 47) GGCGGCCG 1 chrX:5187269-5187389 ( 49) GGCGGCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.5227 E= 1.3e+004 -1064 -1064 204 -1064 -1064 -1064 204 -1064 -1064 201 -1064 -1064 -1064 -1064 204 -1064 -1064 -1064 204 -1064 115 -99 36 -1064 -1064 118 84 -1064 -1064 -1064 204 -1064 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 16 E= 1.3e+004 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.562500 0.125000 0.312500 0.000000 0.000000 0.562500 0.437500 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCGGRSG MEME-3 regular expression -------------------------------------------------------------------------------- GGCGG[AG][CG]G -------------------------------------------------------------------------------- Time 19.32 secs. ******************************************************************************** ******************************************************************************** MOTIF WAAASAAA MEME-4 width = 8 sites = 44 llr = 352 E-value = 1.5e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 5aa8:9a9 pos.-specific C 2:::6::1 probability G ::::31:: matrix T 3::21::: bits 2.0 ** * 1.8 ** * 1.6 ** *** 1.4 ** *** Relative 1.2 *** *** Entropy 1.0 *** *** (11.5 bits) 0.8 *** *** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAACAAA consensus T TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:17383854-17383974 21 1.69e-05 AAATAAAATA AAAACAAA CAAATGTCGT chrX:14879020-14879140 2 1.69e-05 a aaaacaaa aacgaaacag chr2R:10923851-10923971 74 1.69e-05 TAGCGAGCGG AAAACAAA ACCGCGAATC chr2R:11053869-11053989 84 1.69e-05 ACACAACCTG AAAACAAA GCGACACAAC chr2R:19528720-19528840 40 1.69e-05 ATTTGCATTA AAAACAAA TGTAGTGTAG chrX:12292595-12292715 9 1.69e-05 AAACTTTA AAAACAAA CAGTCATGTT chr2L:18348101-18348221 68 1.69e-05 AATTACAAGC AAAACAAA GAGAAGTGCC chr2L:18294522-18294642 59 1.69e-05 CACGCGTCTG AAAACAAA AGCAAGCATG chrX:4511752-4511872 13 3.38e-05 ACGTAAAAAT TAAACAAA AACATAACAA chr3R:17970994-17971114 90 3.38e-05 TCAGGTTGTC TAAACAAA TTAGAAAGAA chr2R:9463585-9463705 32 3.38e-05 TGGGTATTGA TAAACAAA ATCAGGTCTA chr2R:8340282-8340402 39 3.38e-05 TTAGCTGTCA TAAACAAA TGACATGCCA chrX:6550220-6550340 102 5.05e-05 GTTTTGTCAG AAAAGAAA GCACCAACTT chr3R:9196002-9196122 48 5.05e-05 ATCGGTGAAG AAAAGAAA GATATTGCTG chr3L:16705767-16705887 67 5.05e-05 GGCGGAAACA AAAAGAAA CCCAAGTCGA chrX:18980528-18980648 61 1.01e-04 TGGCGGCGCG AAATCAAA CGAAATGTAA chr3L:17292317-17292437 52 1.01e-04 AAGCCCACAT CAAACAAA AAGCGGAAAA chr3R:22810408-22810528 5 1.01e-04 GCAG CAAACAAA TTCGTTTCTG chr2R:12097603-12097723 18 1.01e-04 TTGTAGGGCG TAAAGAAA AAGGCGGCAC chr2R:8411392-8411512 14 1.01e-04 TTGTGGCAGT TAAAGAAA CGTGACGCCG chr2L:20826350-20826470 90 1.01e-04 GATTTATCTA CAAACAAA AGGTACGAGC chrX:5607804-5607924 102 1.01e-04 TTGTGTGCAA AAATCAAA TTAACAAGCA chr2R:17692450-17692570 104 1.01e-04 TATGTTCACT CAAACAAA GATCTAACA chr2L:15783120-15783240 22 1.01e-04 ATGAGTCACC TAAAGAAA TGGCGGAGAT chr2L:19270851-19270971 105 1.17e-04 CGCACTTTCA TAATCAAA GTCGAATA chr3R:24477590-24477710 12 1.50e-04 ATTACTTTGG CAAAGAAA TTGAAATTGC chr3L:12949534-12949654 58 1.50e-04 TTCCGCTGTC AAATGAAA CGCTTGCCAT chr2L:14211495-14211615 93 1.50e-04 ATTGCATTGA AAATGAAA AGCGCCTGCG chr3L:17237093-17237213 113 1.68e-04 TTGGCAGCac aaaataaa chr3R:29553305-29553425 35 2.01e-04 ATCGCAAGGA TAATGAAA TTTTGATTAT chr2R:24840675-24840795 6 2.01e-04 ACTGT CAATCAAA CGGAGCGAGG chrX:12306690-12306810 74 2.01e-04 AGCTAATCTG TAATGAAA AACTGAACGG chr2R:23235099-23235219 22 2.01e-04 AATCTCATTA TAATGAAA CGCAAGTTAT chr3L:9356298-9356418 33 2.01e-04 TAAGACTTGT CAATCAAA GCAGACAAAT chrX:14712622-14712742 80 2.18e-04 AACGCACGAA TAAATAAA AATAATTTGG chrX:16624669-16624789 72 2.18e-04 AACAATGATA TAAATAAA TAATTTGCTT chr3L:5957296-5957416 113 2.18e-04 AAGTGTTATG TAAATAAA chr3L:11853047-11853167 9 2.51e-04 TTTTGCCC AAAACGAA GTTCAGCAAG chr2R:6525378-6525498 38 2.51e-04 AAGCGTGCCC AAAACAAC TTTCAAGCAC chr2L:6173132-6173252 65 2.51e-04 CTACCGCAGA AAAACAAC AACAATAGGG chr3R:9956873-9956993 91 2.51e-04 aacaacagca aaaacaac GCTGTTTGAC chr3R:27477642-27477762 66 2.51e-04 CTGTTGGCGA AAAACGAA AGTGAGCGCA chr3R:30990083-30990203 87 3.66e-04 CGAGGACGAA AAAAGGAA TTCTAATTCG chr2L:14112336-14112456 90 3.84e-04 CCCGATCCCG AAAAAAAA CGAGGCAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:17383854-17383974 1.7e-05 20_[+4]_92 chrX:14879020-14879140 1.7e-05 1_[+4]_111 chr2R:10923851-10923971 1.7e-05 73_[+4]_39 chr2R:11053869-11053989 1.7e-05 83_[+4]_29 chr2R:19528720-19528840 1.7e-05 39_[+4]_73 chrX:12292595-12292715 1.7e-05 8_[+4]_104 chr2L:18348101-18348221 1.7e-05 67_[+4]_45 chr2L:18294522-18294642 1.7e-05 58_[+4]_54 chrX:4511752-4511872 3.4e-05 12_[+4]_100 chr3R:17970994-17971114 3.4e-05 89_[+4]_23 chr2R:9463585-9463705 3.4e-05 31_[+4]_81 chr2R:8340282-8340402 3.4e-05 38_[+4]_74 chrX:6550220-6550340 5e-05 101_[+4]_11 chr3R:9196002-9196122 5e-05 47_[+4]_65 chr3L:16705767-16705887 5e-05 66_[+4]_46 chrX:18980528-18980648 0.0001 60_[+4]_52 chr3L:17292317-17292437 0.0001 51_[+4]_61 chr3R:22810408-22810528 0.0001 4_[+4]_108 chr2R:12097603-12097723 0.0001 17_[+4]_95 chr2R:8411392-8411512 0.0001 13_[+4]_99 chr2L:20826350-20826470 0.0001 89_[+4]_23 chrX:5607804-5607924 0.0001 101_[+4]_11 chr2R:17692450-17692570 0.0001 103_[+4]_9 chr2L:15783120-15783240 0.0001 21_[+4]_91 chr2L:19270851-19270971 0.00012 104_[+4]_8 chr3R:24477590-24477710 0.00015 11_[+4]_101 chr3L:12949534-12949654 0.00015 57_[+4]_55 chr2L:14211495-14211615 0.00015 92_[+4]_20 chr3L:17237093-17237213 0.00017 112_[+4] chr3R:29553305-29553425 0.0002 34_[+4]_78 chr2R:24840675-24840795 0.0002 5_[+4]_107 chrX:12306690-12306810 0.0002 73_[+4]_39 chr2R:23235099-23235219 0.0002 21_[+4]_91 chr3L:9356298-9356418 0.0002 32_[+4]_80 chrX:14712622-14712742 0.00022 79_[+4]_33 chrX:16624669-16624789 0.00022 71_[+4]_41 chr3L:5957296-5957416 0.00022 112_[+4] chr3L:11853047-11853167 0.00025 8_[+4]_104 chr2R:6525378-6525498 0.00025 37_[+4]_75 chr2L:6173132-6173252 0.00025 64_[+4]_48 chr3R:9956873-9956993 0.00025 90_[+4]_22 chr3R:27477642-27477762 0.00025 65_[+4]_47 chr3R:30990083-30990203 0.00037 86_[+4]_26 chr2L:14112336-14112456 0.00038 89_[+4]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WAAASAAA width=8 seqs=44 chr3L:17383854-17383974 ( 21) AAAACAAA 1 chrX:14879020-14879140 ( 2) AAAACAAA 1 chr2R:10923851-10923971 ( 74) AAAACAAA 1 chr2R:11053869-11053989 ( 84) AAAACAAA 1 chr2R:19528720-19528840 ( 40) AAAACAAA 1 chrX:12292595-12292715 ( 9) AAAACAAA 1 chr2L:18348101-18348221 ( 68) AAAACAAA 1 chr2L:18294522-18294642 ( 59) AAAACAAA 1 chrX:4511752-4511872 ( 13) TAAACAAA 1 chr3R:17970994-17971114 ( 90) TAAACAAA 1 chr2R:9463585-9463705 ( 32) TAAACAAA 1 chr2R:8340282-8340402 ( 39) TAAACAAA 1 chrX:6550220-6550340 ( 102) AAAAGAAA 1 chr3R:9196002-9196122 ( 48) AAAAGAAA 1 chr3L:16705767-16705887 ( 67) AAAAGAAA 1 chrX:18980528-18980648 ( 61) AAATCAAA 1 chr3L:17292317-17292437 ( 52) CAAACAAA 1 chr3R:22810408-22810528 ( 5) CAAACAAA 1 chr2R:12097603-12097723 ( 18) TAAAGAAA 1 chr2R:8411392-8411512 ( 14) TAAAGAAA 1 chr2L:20826350-20826470 ( 90) CAAACAAA 1 chrX:5607804-5607924 ( 102) AAATCAAA 1 chr2R:17692450-17692570 ( 104) CAAACAAA 1 chr2L:15783120-15783240 ( 22) TAAAGAAA 1 chr2L:19270851-19270971 ( 105) TAATCAAA 1 chr3R:24477590-24477710 ( 12) CAAAGAAA 1 chr3L:12949534-12949654 ( 58) AAATGAAA 1 chr2L:14211495-14211615 ( 93) AAATGAAA 1 chr3L:17237093-17237213 ( 113) AAAATAAA 1 chr3R:29553305-29553425 ( 35) TAATGAAA 1 chr2R:24840675-24840795 ( 6) CAATCAAA 1 chrX:12306690-12306810 ( 74) TAATGAAA 1 chr2R:23235099-23235219 ( 22) TAATGAAA 1 chr3L:9356298-9356418 ( 33) CAATCAAA 1 chrX:14712622-14712742 ( 80) TAAATAAA 1 chrX:16624669-16624789 ( 72) TAAATAAA 1 chr3L:5957296-5957416 ( 113) TAAATAAA 1 chr3L:11853047-11853167 ( 9) AAAACGAA 1 chr2R:6525378-6525498 ( 38) AAAACAAC 1 chr2L:6173132-6173252 ( 65) AAAACAAC 1 chr3R:9956873-9956993 ( 91) AAAACAAC 1 chr3R:27477642-27477762 ( 66) AAAACGAA 1 chr3R:30990083-30990203 ( 87) AAAAGGAA 1 chr2L:14112336-14112456 ( 90) AAAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.67987 E= 1.5e+005 104 -64 -1210 33 198 -1210 -1210 -1210 198 -1210 -1210 -1210 161 -1210 -1210 -16 -348 125 28 -148 188 -1210 -184 -1210 198 -1210 -1210 -1210 188 -186 -1210 -1210 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 44 E= 1.5e+005 0.522727 0.159091 0.000000 0.318182 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.772727 0.000000 0.000000 0.227273 0.022727 0.590909 0.295455 0.090909 0.931818 0.000000 0.068182 0.000000 1.000000 0.000000 0.000000 0.000000 0.931818 0.068182 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAAASAAA MEME-4 regular expression -------------------------------------------------------------------------------- [AT]AA[AT][CG]AAA -------------------------------------------------------------------------------- Time 25.07 secs. ******************************************************************************** ******************************************************************************** MOTIF GTGGGTGT MEME-5 width = 8 sites = 2 llr = 22 E-value = 9.7e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G a:aaa:a: matrix T :a:::a:a bits 2.0 ******** 1.8 ******** 1.6 ******** 1.4 ******** Relative 1.2 ******** Entropy 1.0 ******** (16.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTGGGTGT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:4913788-4913908 71 1.42e-05 CCACCTTCCT GTGGGTGT ACTGGCCCAG chrX:868574-868694 54 1.42e-05 GCCATCTGGC GTGGGTGT TTGGGAGTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:4913788-4913908 1.4e-05 70_[+5]_42 chrX:868574-868694 1.4e-05 53_[+5]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGGGTGT width=8 seqs=2 chr3L:4913788-4913908 ( 71) GTGGGTGT 1 chrX:868574-868694 ( 54) GTGGGTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.9378 E= 9.7e+005 -765 -765 203 -765 -765 -765 -765 197 -765 -765 203 -765 -765 -765 203 -765 -765 -765 203 -765 -765 -765 -765 197 -765 -765 203 -765 -765 -765 -765 197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 9.7e+005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGGGTGT MEME-5 regular expression -------------------------------------------------------------------------------- GTGGGTGT -------------------------------------------------------------------------------- Time 30.72 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:17142191-17142311 5.74e-02 85_[+2(1.38e-05)]_27 chr2R:23114576-23114696 7.11e-02 77_[+2(2.82e-05)]_35 chr4:718719-718839 2.33e-01 120 chr2R:12843801-12843921 4.68e-02 63_[+2(1.38e-05)]_49 chr2L:14211495-14211615 3.59e-03 58_[+1(4.26e-05)]_54 chr2L:18294522-18294642 4.61e-05 58_[+4(1.69e-05)]_18_[+2(1.38e-05)]_\ 28 chr2R:14447893-14448013 2.17e-01 19_[+2(8.43e-05)]_93 chr3L:1041528-1041648 2.85e-02 102_[+2(2.82e-05)]_10 chrX:15353820-15353940 1.08e-01 38_[+2(9.84e-05)]_74 chr2L:8185162-8185282 5.17e-03 15_[+1(2.87e-05)]_97 chr2L:7953486-7953606 1.38e-02 65_[+1(1.42e-05)]_47 chr2L:10603760-10603880 9.43e-03 38_[+1(5.68e-05)]_74 chr2R:17141498-17141618 4.40e-03 52_[+1(4.26e-05)]_60 chr2L:5036247-5036367 7.30e-04 61_[+2(2.82e-05)]_20_[+1(2.87e-05)]_\ 23 chr3L:11315321-11315441 1.22e-01 52_[+1(4.26e-05)]_60 chr3L:15011282-15011402 7.71e-02 55_[+2(2.82e-05)]_57 chr3R:8389781-8389901 3.21e-03 59_[+1(1.42e-05)]_53 chr2R:12747054-12747174 2.35e-01 47_[+1(5.68e-05)]_65 chr2R:13340253-13340373 1.90e-02 84_[+2(1.38e-05)]_28 chr2L:15903874-15903994 3.73e-03 47_[+1(1.42e-05)]_65 chr2L:3183299-3183419 4.32e-02 77_[+2(2.82e-05)]_35 chr3R:11394038-11394158 1.66e-02 39_[+1(5.68e-05)]_73 chrX:2684610-2684730 2.50e-03 21_[+1(8.55e-05)]_29_[+3(2.68e-05)]_\ 54 chr3R:27098761-27098881 3.02e-02 95_[+2(2.82e-05)]_17 chr2R:8623359-8623479 1.11e-01 78_[+1(1.42e-05)]_34 chr3R:27477642-27477762 5.21e-02 120 chr3L:12380745-12380865 8.94e-03 32_[+1(1.42e-05)]_80 chrX:12540907-12541027 1.28e-02 71_[+1(2.87e-05)]_41 chr3L:9356298-9356418 2.29e-01 120 chr2R:14653904-14654024 1.40e-02 69_[+2(2.82e-05)]_43 chr2L:12373742-12373862 8.76e-03 120 chr2R:14446974-14447094 7.38e-02 69_[+2(2.82e-05)]_43 chr2L:1902364-1902484 1.31e-01 120 chr2R:23220460-23220580 2.49e-03 120 chr2R:23235099-23235219 1.14e-03 61_[+2(2.82e-05)]_51 chr2R:22364384-22364504 1.21e-02 48_[+1(1.42e-05)]_64 chr3R:28317297-28317417 1.73e-01 120 chr2L:15783120-15783240 3.96e-04 71_[+1(1.42e-05)]_41 chr3R:8456603-8456723 3.34e-03 56_[+1(1.42e-05)]_56 chr2L:15439081-15439201 7.66e-03 86_[+1(8.55e-05)]_26 chr2L:12602962-12603082 1.63e-01 120 chr2L:17195328-17195448 4.15e-01 120 chrX:3815814-3815934 2.64e-02 29_[+2(2.82e-05)]_83 chr2R:7287970-7288090 3.25e-02 120 chr3L:22214859-22214979 2.96e-04 73_[+1(1.42e-05)]_39 chrX:7593213-7593333 3.18e-03 18_[+2(1.38e-05)]_94 chrX:5957171-5957291 2.39e-01 69_[+1(5.68e-05)]_43 chr3L:13146643-13146763 2.27e-02 120 chr2R:22133994-22134114 3.48e-04 42_[+1(2.87e-05)]_33_[+2(2.82e-05)]_\ 29 chrX:7466460-7466580 7.34e-02 107_[+2(1.38e-05)]_5 chrX:19585276-19585396 4.22e-04 49_[+2(2.82e-05)]_25_[+1(2.87e-05)]_\ 30 chr2R:8340282-8340402 1.46e-03 38_[+4(3.38e-05)]_20_[+1(2.87e-05)]_\ 46 chr3L:20580746-20580866 9.25e-03 76_[+2(1.38e-05)]_36 chr3L:14461188-14461308 5.76e-02 98_[+1(2.87e-05)]_14 chr3L:7560718-7560838 2.29e-02 70_[+2(1.38e-05)]_42 chrX:12306690-12306810 2.21e-04 53_[+2(1.38e-05)]_59 chr2L:8024487-8024607 2.92e-03 27_[+2(2.82e-05)]_85 chrX:11320045-11320165 1.33e-01 65_[+1(2.87e-05)]_47 chr3R:9956873-9956993 1.06e-02 35_[+2(2.82e-05)]_77 chr3R:15632586-15632706 1.94e-03 46_[+2(4.15e-05)]_66 chr3R:11544290-11544410 2.68e-02 49_[+1(8.55e-05)]_63 chr2L:18516495-18516615 3.39e-02 79_[+1(1.42e-05)]_33 chr3L:20138464-20138584 1.49e-01 65_[+2(2.82e-05)]_47 chr2L:18348101-18348221 2.65e-03 34_[+1(1.42e-05)]_25_[+4(1.69e-05)]_\ 45 chr2R:7123449-7123569 4.00e-03 37_[+2(5.54e-05)]_75 chr2L:13540859-13540979 1.20e-01 24_[+1(2.87e-05)]_88 chr3R:30990083-30990203 9.83e-03 48_[+1(1.42e-05)]_64 chr3R:26432672-26432792 3.42e-02 62_[+2(2.82e-05)]_50 chr2R:17692450-17692570 1.28e-02 41_[+1(1.42e-05)]_71 chrX:5607804-5607924 6.38e-05 23_[+2(2.82e-05)]_89 chr3L:13271405-13271525 2.05e-02 74_[+1(4.26e-05)]_38 chr3R:31181978-31182098 3.44e-03 19_[+1(2.87e-05)]_8_[+2(5.54e-05)]_\ 77 chr2L:20826350-20826470 4.75e-01 120 chr2L:19246009-19246129 8.14e-04 7_[+1(1.42e-05)]_1_[+3(1.35e-05)]_\ 96 chr3L:18916595-18916715 5.09e-03 53_[+2(5.54e-05)]_13_[+2(2.82e-05)]_\ 38 chrX:7744084-7744204 3.55e-02 120 chrX:23089515-23089635 8.71e-01 120 chr2L:6173132-6173252 1.54e-02 120 chr3R:4632782-4632902 1.00e-02 50_[+2(4.15e-05)]_49_[+1(7.07e-05)]_\ 5 chr2L:10626057-10626177 1.99e-03 62_[+2(1.38e-05)]_50 chr3L:14420149-14420269 1.28e-01 75_[+1(1.42e-05)]_37 chr2L:12880602-12880722 6.35e-02 41_[+1(1.42e-05)]_71 chr3R:25876758-25876878 6.75e-03 120 chr2R:9611537-9611657 8.26e-02 70_[+2(2.82e-05)]_42 chr3L:14356635-14356755 1.21e-03 65_[+1(4.26e-05)]_1_[+3(3.98e-05)]_\ 38 chr2L:19634164-19634284 9.28e-03 57_[+2(1.38e-05)]_55 chrX:12292595-12292715 8.38e-05 8_[+4(1.69e-05)]_31_[+1(4.26e-05)]_\ 1_[+3(7.87e-05)]_56 chr3R:10538919-10539039 3.51e-02 84_[+2(1.38e-05)]_28 chr3L:4072822-4072942 6.19e-02 120 chr2R:24840675-24840795 4.64e-03 40_[+1(4.26e-05)]_72 chrX:5187269-5187389 5.59e-04 23_[+2(5.54e-05)]_17_[+3(7.87e-05)]_\ 19_[+1(8.55e-05)]_37 chrX:20105119-20105239 1.49e-02 71_[+1(1.42e-05)]_41 chr2R:12234295-12234415 3.38e-02 67_[+2(2.82e-05)]_45 chr2R:12847388-12847508 4.94e-02 16_[+2(1.38e-05)]_96 chr3L:15366452-15366572 1.43e-01 38_[+1(2.87e-05)]_74 chr3R:11395678-11395798 2.73e-03 55_[+3(1.35e-05)]_12_[+1(7.07e-05)]_\ 37 chr3L:10078694-10078814 2.27e-01 71_[+2(2.82e-05)]_41 chr2R:9463585-9463705 1.71e-01 31_[+4(3.38e-05)]_81 chr3L:14365572-14365692 2.87e-02 62_[+1(2.87e-05)]_50 chr2L:19415323-19415443 1.26e-02 38_[+1(1.42e-05)]_74 chr2R:22462877-22462997 2.29e-03 40_[+1(1.42e-05)]_64_[+2(1.38e-05)] chr3L:16632285-16632405 1.95e-01 120 chr3L:5957296-5957416 3.55e-04 74_[+2(5.54e-05)]_38 chr3L:3596480-3596600 6.52e-03 71_[+3(5.26e-05)]_41 chr3L:5125341-5125461 3.51e-03 68_[+2(2.82e-05)]_44 chr2R:6718281-6718401 1.57e-01 36_[+2(6.95e-05)]_76 chrX:14585421-14585541 1.15e-01 49_[+2(1.38e-05)]_63 chrX:868574-868694 3.74e-04 53_[+5(1.42e-05)]_59 chr3R:29553305-29553425 4.84e-02 120 chr3L:12049708-12049828 6.91e-01 120 chr3L:17208753-17208873 1.20e-02 120 chr3R:3888896-3889016 3.20e-02 43_[+1(1.42e-05)]_69 chr3R:12222722-12222842 3.57e-01 120 chr3L:21090319-21090439 5.94e-03 96_[+2(2.82e-05)]_16 chr2R:6525378-6525498 1.86e-01 120 chr3R:22965370-22965490 8.40e-02 120 chrX:11643382-11643502 4.46e-01 120 chr3R:30770829-30770949 1.47e-03 78_[+1(1.42e-05)]_34 chr2L:13325962-13326082 7.24e-01 120 chrX:2811200-2811320 1.39e-02 36_[+1(1.42e-05)]_76 chr3L:17237093-17237213 2.89e-02 120 chr3R:24503767-24503887 7.27e-04 30_[+1(4.26e-05)]_1_[+3(3.98e-05)]_\ 73 chr2L:887929-888049 4.59e-02 120 chr3L:20622323-20622443 1.64e-02 65_[+1(4.26e-05)]_47 chr2L:20576078-20576198 7.96e-03 120 chr3R:23167814-23167934 9.35e-04 44_[+2(1.38e-05)]_68 chr3L:11853047-11853167 1.15e-04 72_[+1(2.87e-05)]_1_[+3(3.98e-05)]_\ 31 chrX:18838630-18838750 2.45e-02 24_[+2(2.82e-05)]_88 chr3R:17970994-17971114 9.51e-04 59_[+2(1.38e-05)]_22_[+4(3.38e-05)]_\ 23 chrX:13224991-13225111 1.50e-02 55_[+2(5.54e-05)]_57 chr3R:17616666-17616786 4.59e-01 120 chr2R:21800245-21800365 5.43e-01 120 chr2R:8411392-8411512 2.20e-05 30_[+3(2.68e-05)]_56_[+2(1.38e-05)]_\ 18 chr3L:5820949-5821069 2.22e-01 32_[+1(2.87e-05)]_80 chr2R:15038854-15038974 1.98e-01 120 chr3R:23397049-23397169 3.43e-02 42_[+1(1.42e-05)]_70 chr2R:12097603-12097723 1.55e-04 61_[+2(1.38e-05)]_51 chr3R:24386589-24386709 1.37e-01 37_[+2(2.82e-05)]_75 chr2R:13746453-13746573 3.78e-04 47_[+2(1.38e-05)]_34_[+1(1.42e-05)]_\ 23 chr3L:17153627-17153747 2.32e-02 37_[+1(1.42e-05)]_75 chrX:21058664-21058784 6.74e-01 120 chr2R:9363426-9363546 3.83e-02 41_[+2(6.95e-05)]_71 chr3L:3702663-3702783 1.02e-01 65_[+1(1.42e-05)]_47 chr2L:6584473-6584593 5.31e-03 86_[+2(1.38e-05)]_26 chr2R:19528720-19528840 5.18e-03 39_[+4(1.69e-05)]_73 chr2R:11053869-11053989 3.78e-03 60_[+1(4.26e-05)]_15_[+4(1.69e-05)]_\ 29 chr3L:10199798-10199918 2.77e-02 35_[+1(1.42e-05)]_77 chrX:2814579-2814699 3.29e-05 32_[+2(1.38e-05)]_80 chr3R:5527720-5527840 9.60e-03 6_[+1(1.42e-05)]_106 chr2L:18284304-18284424 3.19e-02 40_[+2(1.38e-05)]_72 chr2L:20481596-20481716 6.12e-01 120 chr2R:17214369-17214489 1.29e-01 84_[+1(1.42e-05)]_28 chr2R:9470975-9471095 4.02e-03 79_[+1(4.26e-05)]_33 chr2L:7097553-7097673 8.81e-02 9_[+2(2.82e-05)]_103 chr2L:17953399-17953519 1.20e-01 89_[+2(6.95e-05)]_23 chr2L:14112336-14112456 3.90e-03 31_[+1(2.87e-05)]_81 chr2R:23108192-23108312 3.93e-02 29_[+2(4.15e-05)]_83 chr3L:19328192-19328312 8.23e-02 108_[+1(1.42e-05)]_4 chr2L:19382520-19382640 1.99e-01 120 chr2L:17650912-17651032 3.22e-01 120 chrX:18254615-18254735 1.26e-01 23_[+1(1.42e-05)]_89 chrX:16624669-16624789 3.80e-04 47_[+2(2.82e-05)]_65 chr2R:13356041-13356161 4.76e-01 120 chr3R:22810408-22810528 2.07e-03 54_[+2(4.15e-05)]_58 chr2R:15578904-15579024 1.71e-01 46_[+1(2.87e-05)]_66 chr2L:19682690-19682810 3.55e-02 43_[+2(1.38e-05)]_69 chr2R:20305553-20305673 2.19e-01 120 chr3L:684203-684323 1.19e-01 31_[+1(2.87e-05)]_81 chrX:3123711-3123831 1.15e-01 46_[+1(2.87e-05)]_66 chr3L:18161295-18161415 5.41e-03 98_[+2(5.54e-05)]_14 chr2L:3035095-3035215 9.49e-02 76_[+2(1.38e-05)]_36 chr2R:25187894-25188014 8.49e-01 120 chr2L:12374695-12374815 4.08e-04 48_[+2(4.15e-05)]_64 chr2L:17163458-17163578 3.71e-04 86_[+1(2.87e-05)]_1_[+3(2.68e-05)]_\ 17 chrX:15203797-15203917 8.04e-04 120 chr3R:13872321-13872441 2.27e-01 120 chr3R:9673362-9673482 2.49e-03 21_[+1(1.42e-05)]_91 chr2L:3179812-3179932 1.57e-02 27_[+2(1.38e-05)]_85 chr2R:15783185-15783305 1.19e-03 45_[+2(6.95e-05)]_67 chr2R:10923851-10923971 2.22e-03 55_[+1(2.87e-05)]_10_[+4(1.69e-05)]_\ 39 chr3L:2407402-2407522 3.78e-01 120 chr3R:20347022-20347142 1.30e-03 100_[+2(2.82e-05)]_12 chr3R:19103304-19103424 1.04e-02 120 chrX:12353603-12353723 1.92e-03 27_[+2(2.82e-05)]_11_[+3(6.57e-05)]_\ 66 chr3L:16705767-16705887 1.11e-03 47_[+1(1.42e-05)]_11_[+4(5.05e-05)]_\ 46 chr3L:12949534-12949654 9.28e-03 30_[+2(2.82e-05)]_82 chr3R:16408540-16408660 1.58e-01 120 chr3L:17292317-17292437 4.03e-04 97_[+2(4.15e-05)]_15 chrX:14879020-14879140 4.40e-02 1_[+4(1.69e-05)]_111 chr2R:9678015-9678135 5.30e-03 105_[+2(4.15e-05)]_7 chrX:18980528-18980648 3.79e-04 42_[+1(5.68e-05)]_70 chrX:22544803-22544923 4.14e-03 53_[+2(5.54e-05)]_59 chr3R:9196002-9196122 1.60e-03 47_[+4(5.05e-05)]_65 chrX:17472591-17472711 2.98e-02 69_[+1(5.68e-05)]_43 chr2R:22768530-22768650 9.80e-01 120 chr3L:5905847-5905967 3.15e-03 103_[+2(1.38e-05)]_9 chr3R:19774335-19774455 6.69e-02 86_[+2(1.38e-05)]_26 chr2L:9067237-9067357 7.58e-02 85_[+1(5.68e-05)]_27 chrX:8371898-8372018 2.16e-01 120 chrX:7005547-7005667 6.67e-01 120 chr3L:20464817-20464937 2.48e-01 34_[+1(2.87e-05)]_78 chr3R:30294738-30294858 1.82e-02 41_[+1(2.87e-05)]_71 chr2L:17201920-17202040 2.80e-02 43_[+1(4.26e-05)]_69 chr3R:19271277-19271397 2.60e-01 32_[+1(5.68e-05)]_80 chr3L:24054623-24054743 3.33e-02 54_[+2(1.38e-05)]_58 chr3R:10501330-10501450 2.01e-02 34_[+3(5.26e-05)]_78 chr3L:4913788-4913908 2.65e-05 16_[+2(5.54e-05)]_46_[+5(1.42e-05)]_\ 42 chrX:7422728-7422848 1.02e-01 20_[+1(2.87e-05)]_92 chr2L:19309178-19309298 7.73e-03 40_[+1(2.87e-05)]_72 chr3R:27843922-27844042 7.38e-02 75_[+1(5.68e-05)]_37 chr2L:1492421-1492541 8.57e-01 120 chr3R:19657380-19657500 7.32e-02 48_[+2(2.82e-05)]_64 chr3R:19245548-19245668 1.40e-02 52_[+2(5.54e-05)]_60 chrX:14712622-14712742 1.58e-04 35_[+2(1.38e-05)]_77 chr3L:17383854-17383974 2.24e-04 20_[+4(1.69e-05)]_29_[+1(5.68e-05)]_\ 55 chr2R:9677296-9677416 9.49e-02 120 chr3R:20066566-20066686 4.55e-02 120 chr3R:19490074-19490194 4.39e-01 120 chr3R:5927988-5928108 4.28e-02 120 chr2R:16462388-16462508 3.88e-02 31_[+1(1.42e-05)]_81 chr3L:15328531-15328651 5.41e-01 120 chr3L:20999779-20999899 8.01e-02 64_[+2(1.38e-05)]_48 chrX:2803926-2804046 1.37e-01 22_[+1(1.42e-05)]_90 chrX:6550220-6550340 4.99e-03 74_[+1(2.87e-05)]_19_[+4(5.05e-05)]_\ 11 chr3R:11934010-11934130 3.98e-01 120 chr3L:4978164-4978284 3.74e-05 96_[+2(4.15e-05)]_8_[+3(2.68e-05)] chr2R:10162520-10162640 9.03e-02 94_[+2(6.95e-05)]_18 chr2R:10326384-10326504 8.34e-04 56_[+1(1.42e-05)]_13_[+3(1.35e-05)]_\ 35 chr3L:4776563-4776683 3.46e-03 68_[+3(1.35e-05)]_44 chr2L:19270851-19270971 1.18e-02 33_[+2(6.95e-05)]_79 chr2L:6301751-6301871 2.58e-01 76_[+2(6.95e-05)]_36 chr3L:15494701-15494821 8.99e-01 120 chr3R:14959515-14959635 4.38e-01 120 chr2L:18765518-18765638 8.01e-02 72_[+2(1.38e-05)]_40 chrX:6128855-6128975 1.71e-03 62_[+2(9.84e-05)]_9_[+1(8.55e-05)]_\ 33 chrX:5588600-5588720 3.81e-02 55_[+1(2.87e-05)]_57 chr2L:17958456-17958576 4.03e-01 120 chr2L:12803599-12803719 3.68e-04 64_[+2(1.38e-05)]_25_[+3(1.35e-05)]_\ 15 chr3L:18842378-18842498 4.41e-01 120 chrX:20583443-20583563 1.09e-01 120 chrX:19811182-19811302 3.63e-01 120 chrX:20386018-20386138 1.94e-02 50_[+2(2.82e-05)]_62 chrX:14122856-14122976 6.80e-01 120 chr2L:6391600-6391720 1.33e-02 73_[+2(2.82e-05)]_39 chr2R:21177912-21178032 7.07e-01 120 chr3L:5201910-5202030 1.10e-02 61_[+2(5.54e-05)]_51 chrX:4511752-4511872 4.14e-03 12_[+4(3.38e-05)]_34_[+5(1.42e-05)]_\ [+5(1.42e-05)]_[+5(1.42e-05)]_42 chr3L:7941657-7941777 5.30e-05 73_[+2(1.38e-05)]_39 chr2R:15375212-15375332 8.43e-01 120 chr3R:24477590-24477710 1.19e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n02.farnam.hpc.yale.internal ********************************************************************************