******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG9437.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2L:18576399-18576519 1.0000 120 chr2L:8257539-8257659 1.0000 120 chr2L:14520624-14520744 1.0000 120 chr2R:11251878-11251998 1.0000 120 chr2R:21509724-21509844 1.0000 120 chr2L:19057931-19058051 1.0000 120 chr2L:2724553-2724673 1.0000 120 chr3R:15340506-15340626 1.0000 120 chr3R:15147984-15148104 1.0000 120 chr2L:17715703-17715823 1.0000 120 chr2L:21086293-21086413 1.0000 120 chrX:8060287-8060407 1.0000 120 chr2L:7473408-7473528 1.0000 120 chr3L:22470430-22470550 1.0000 120 chr2R:23083569-23083689 1.0000 120 chr3L:8187470-8187590 1.0000 120 chr2R:6760428-6760548 1.0000 120 chrX:2244892-2245012 1.0000 120 chr2R:12981488-12981608 1.0000 120 chr3L:9129886-9130006 1.0000 120 chrX:10807212-10807332 1.0000 120 chr2L:8355558-8355678 1.0000 120 chr2R:17484676-17484796 1.0000 120 chr2L:17715989-17716109 1.0000 120 chr2R:16660693-16660813 1.0000 120 chr2L:13332861-13332981 1.0000 120 chr2R:6760631-6760751 1.0000 120 chr2L:8257745-8257865 1.0000 120 chrX:2214184-2214304 1.0000 120 chr2L:12201535-12201655 1.0000 120 chr3L:22136607-22136727 1.0000 120 chr3L:7808135-7808255 1.0000 120 chr2L:18732407-18732527 1.0000 120 chr2L:5195778-5195898 1.0000 120 chr2R:9503427-9503547 1.0000 120 chr3R:15148184-15148304 1.0000 120 chr2L:16715573-16715693 1.0000 120 chr3R:9543906-9544026 1.0000 120 chrX:6584460-6584580 1.0000 120 chr3L:13133944-13134064 1.0000 120 chr2L:4614137-4614257 1.0000 120 chr2L:3357368-3357488 1.0000 120 chr3L:9364284-9364404 1.0000 120 chr2L:20083113-20083233 1.0000 120 chr2R:11389054-11389174 1.0000 120 chr2R:15921350-15921470 1.0000 120 chr3L:1100813-1100933 1.0000 120 chr3L:20620403-20620523 1.0000 120 chr2R:15921565-15921685 1.0000 120 chr3L:9130088-9130208 1.0000 120 chrX:2296807-2296927 1.0000 120 chrX:10730052-10730172 1.0000 120 chr3R:17718945-17719065 1.0000 120 chr3L:19235479-19235599 1.0000 120 chr3L:13223800-13223920 1.0000 120 chr3L:22136407-22136527 1.0000 120 chr2R:11252078-11252198 1.0000 120 chr3R:29146877-29146997 1.0000 120 chr3L:16854825-16854945 1.0000 120 chr3L:9112026-9112146 1.0000 120 chr3L:16100205-16100325 1.0000 120 chr2R:7407372-7407492 1.0000 120 chr2L:19058135-19058255 1.0000 120 chr3R:18731412-18731532 1.0000 120 chr3L:12843548-12843668 1.0000 120 chrX:7074665-7074785 1.0000 120 chrX:2245109-2245229 1.0000 120 chr2R:9504638-9504758 1.0000 120 chr3L:17951440-17951560 1.0000 120 chr2R:6196123-6196243 1.0000 120 chr2L:19565347-19565467 1.0000 120 chr2L:35567-35687 1.0000 120 chr2R:4133309-4133429 1.0000 120 chrX:15292924-15293044 1.0000 120 chrX:2214433-2214553 1.0000 120 chr3L:9424294-9424414 1.0000 120 chr3L:13904086-13904206 1.0000 120 chr2R:21509925-21510045 1.0000 120 chr3R:31097355-31097475 1.0000 120 chr3L:19235740-19235860 1.0000 120 chr3R:5268658-5268778 1.0000 120 chrX:5418358-5418478 1.0000 120 chr3L:13903885-13904005 1.0000 120 chr3R:19847445-19847565 1.0000 120 chr3R:19044784-19044904 1.0000 120 chr2L:8931306-8931426 1.0000 120 chr3L:19237830-19237950 1.0000 120 chr3L:16470143-16470263 1.0000 120 chr3R:5772515-5772635 1.0000 120 chr2R:21234696-21234816 1.0000 120 chr3R:12650664-12650784 1.0000 120 chr3R:14655960-14656080 1.0000 120 chr3R:10791608-10791728 1.0000 120 chr3L:1756246-1756366 1.0000 120 chrX:1968327-1968447 1.0000 120 chr2R:24744440-24744560 1.0000 120 chr3L:5980271-5980391 1.0000 120 chr3L:8787400-8787520 1.0000 120 chr3L:18304734-18304854 1.0000 120 chr2L:21154313-21154433 1.0000 120 chrX:3482260-3482380 1.0000 120 chr3R:26137400-26137520 1.0000 120 chr3L:9426057-9426177 1.0000 120 chr2L:2744968-2745088 1.0000 120 chrX:9164746-9164866 1.0000 120 chr2L:5195999-5196119 1.0000 120 chr3L:12193659-12193779 1.0000 120 chr2R:25076310-25076430 1.0000 120 chrX:3377486-3377606 1.0000 120 chr2L:7452235-7452355 1.0000 120 chr4:359002-359122 1.0000 120 chr3R:15417894-15418014 1.0000 120 chr3L:9363922-9364042 1.0000 120 chr2R:10026419-10026539 1.0000 120 chr3L:12843748-12843868 1.0000 120 chr3L:16378237-16378357 1.0000 120 chr3R:17880610-17880730 1.0000 120 chrX:1467166-1467286 1.0000 120 chr2R:16320653-16320773 1.0000 120 chr2R:17484876-17484996 1.0000 120 chr2L:22190475-22190595 1.0000 120 chr2L:13484229-13484349 1.0000 120 chr3R:24357896-24358016 1.0000 120 chr3R:9416887-9417007 1.0000 120 chrX:10730298-10730418 1.0000 120 chr3L:10985764-10985884 1.0000 120 chr3L:21202983-21203103 1.0000 120 chr2L:6873579-6873699 1.0000 120 chr3R:15054533-15054653 1.0000 120 chr3L:4440108-4440228 1.0000 120 chrX:5087853-5087973 1.0000 120 chr3R:16200634-16200754 1.0000 120 chr3L:16423162-16423282 1.0000 120 chr2R:6042531-6042651 1.0000 120 chrX:7066707-7066827 1.0000 120 chr2L:15760715-15760835 1.0000 120 chr3R:22726622-22726742 1.0000 120 chr3L:16193100-16193220 1.0000 120 chr3L:16855033-16855153 1.0000 120 chr2L:16703155-16703275 1.0000 120 chr3L:379040-379160 1.0000 120 chr3R:26853648-26853768 1.0000 120 chr3R:15290446-15290566 1.0000 120 chr3L:18949288-18949408 1.0000 120 chr3R:13645541-13645661 1.0000 120 chr3R:24104624-24104744 1.0000 120 chr3R:20328345-20328465 1.0000 120 chr2L:7886049-7886169 1.0000 120 chr3L:8331573-8331693 1.0000 120 chr2L:16859110-16859230 1.0000 120 chr2R:10049368-10049488 1.0000 120 chr2R:24891563-24891683 1.0000 120 chr3R:11626625-11626745 1.0000 120 chr2R:13235879-13235999 1.0000 120 chrX:11868866-11868986 1.0000 120 chrX:1084466-1084586 1.0000 120 chr2R:15680325-15680445 1.0000 120 chr2L:19565554-19565674 1.0000 120 chr3L:4092841-4092961 1.0000 120 chrX:428299-428419 1.0000 120 chrX:16557215-16557335 1.0000 120 chr3L:7781700-7781820 1.0000 120 chr3L:1101015-1101135 1.0000 120 chr3R:21203336-21203456 1.0000 120 chr3R:9543616-9543736 1.0000 120 chrX:16673030-16673150 1.0000 120 chr3L:8787620-8787740 1.0000 120 chr3R:21203539-21203659 1.0000 120 chr2R:12692650-12692770 1.0000 120 chr3L:1756469-1756589 1.0000 120 chr2L:6000136-6000256 1.0000 120 chr3R:19017537-19017657 1.0000 120 chr3L:627521-627641 1.0000 120 chr2L:182714-182834 1.0000 120 chrX:2383289-2383409 1.0000 120 chr2L:4998127-4998247 1.0000 120 chr3L:20524580-20524700 1.0000 120 chr3L:1549651-1549771 1.0000 120 chr3L:3810089-3810209 1.0000 120 chrX:1380911-1381031 1.0000 120 chr2R:15680117-15680237 1.0000 120 chr3R:22424929-22425049 1.0000 120 chr2L:6921794-6921914 1.0000 120 chr4:358729-358849 1.0000 120 chr3L:17049458-17049578 1.0000 120 chr2L:4442347-4442467 1.0000 120 chrX:9164949-9165069 1.0000 120 chr2L:12201735-12201855 1.0000 120 chr2L:18732625-18732745 1.0000 120 chr3R:7186819-7186939 1.0000 120 chr2R:21687630-21687750 1.0000 120 chr3R:27700281-27700401 1.0000 120 chr3R:22726419-22726539 1.0000 120 chr3L:3810358-3810478 1.0000 120 chrX:6301279-6301399 1.0000 120 chrX:5916763-5916883 1.0000 120 chr3L:9679086-9679206 1.0000 120 chr3R:30532765-30532885 1.0000 120 chr2L:7966546-7966666 1.0000 120 chr3R:11500153-11500273 1.0000 120 chr2L:3402576-3402696 1.0000 120 chr2R:19475951-19476071 1.0000 120 chr3R:17067926-17068046 1.0000 120 chrX:10807002-10807122 1.0000 120 chr2L:3171355-3171475 1.0000 120 chr3R:9545944-9546064 1.0000 120 chr2R:16160193-16160313 1.0000 120 chr2R:9456759-9456879 1.0000 120 chr3L:17069060-17069180 1.0000 120 chr2L:7820566-7820686 1.0000 120 chr3L:23714887-23715007 1.0000 120 chr2L:10246392-10246512 1.0000 120 chr3L:18440135-18440255 1.0000 120 chr2L:21154016-21154136 1.0000 120 chr2L:19735624-19735744 1.0000 120 chr3L:16595260-16595380 1.0000 120 chr2L:8355759-8355879 1.0000 120 chrX:22455163-22455283 1.0000 120 chrX:19898056-19898176 1.0000 120 chr2L:3145655-3145775 1.0000 120 chr3R:18170201-18170321 1.0000 120 chr2R:20236201-20236321 1.0000 120 chr3L:18743917-18744037 1.0000 120 chr3R:4445265-4445385 1.0000 120 chr3R:26537266-26537386 1.0000 120 chrX:9106584-9106704 1.0000 120 chr3L:10985979-10986099 1.0000 120 chr3L:5823902-5824022 1.0000 120 chr3R:5592319-5592439 1.0000 120 chr3L:203931-204051 1.0000 120 chr3R:4292232-4292352 1.0000 120 chr3R:16873107-16873227 1.0000 120 chr2L:3171156-3171276 1.0000 120 chr3L:6496515-6496635 1.0000 120 chrX:17579471-17579591 1.0000 120 chr2R:22937257-22937377 1.0000 120 chr2L:14588977-14589097 1.0000 120 chr2R:10819600-10819720 1.0000 120 chr2L:8619783-8619903 1.0000 120 chrX:10877788-10877908 1.0000 120 chr2R:25076510-25076630 1.0000 120 chr3L:203721-203841 1.0000 120 chrX:2796442-2796562 1.0000 120 chr2L:16715925-16716045 1.0000 120 chr3R:9417091-9417211 1.0000 120 chr3R:30180036-30180156 1.0000 120 chrX:1466961-1467081 1.0000 120 chr2R:13554343-13554463 1.0000 120 chr3L:327740-327860 1.0000 120 chr2R:9584583-9584703 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG9437/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG9437.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.295 C 0.207 G 0.209 T 0.289 Background letter frequencies (from file dataset with add-one prior applied): A 0.295 C 0.207 G 0.209 T 0.289 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CGTTACGT MEME-1 width = 8 sites = 156 llr = 1177 E-value = 9.4e-097 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :2:39::1 pos.-specific C 711::a:: probability G 26::1:a: matrix T 1197:::9 bits 2.3 ** 2.0 ** 1.8 ** 1.6 *** Relative 1.4 * *** Entropy 1.1 * **** (10.9 bits) 0.9 * * **** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGTTACGT consensus G A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:18440135-18440255 72 1.33e-05 CTTACCCCGC CGTTACGT TTGAAGCTCG chr2L:7820566-7820686 28 1.33e-05 GTTAAGTTAC CGTTACGT TTTGTACTCT chr2R:9456759-9456879 77 1.33e-05 CATCCAGATA CGTTACGT GCCGTTCTAC chr2L:7966546-7966666 42 1.33e-05 CTCTTGTGCA CGTTACGT TATATAATTA chr3R:30532765-30532885 107 1.33e-05 CGCTGGTCGA CGTTACGT TTTTAC chr3L:9679086-9679206 83 1.33e-05 GGCGATTGTA CGTTACGT TTTTCATTAC chrX:6301279-6301399 82 1.33e-05 TCGTACTTAA CGTTACGT CACGTAACGG chr3R:27700281-27700401 68 1.33e-05 CTCGCCCTGT CGTTACGT TTTCAACAGT chr2R:21687630-21687750 68 1.33e-05 TTACGTTTAT CGTTACGT TCTTAGCATT chr2L:182714-182834 39 1.33e-05 TTAAGGGGTA CGTTACGT CAAAGAGTTG chr2L:16859110-16859230 61 1.33e-05 caagcactca cgttacgt atcgtgtctt chr3R:26853648-26853768 52 1.33e-05 cgttccgttt cgttacgt agtgcgacgt chr3L:16423162-16423282 73 1.33e-05 ttacgctaga cgttacgt gacgtgaact chr2L:13484229-13484349 52 1.33e-05 CCAGGCGTTG CGTTACGT CGCGCTACGT chr2L:22190475-22190595 44 1.33e-05 CCCCCGATTA CGTTACGT AAATTTGGTG chr3L:16378237-16378357 107 1.33e-05 ACGTTTTTTT CGTTACGT TTCACT chr2L:7452235-7452355 110 1.33e-05 GATTGGCTTA CGTTACGT GAA chr3L:12193659-12193779 96 1.33e-05 GTAGCATTCA CGTTACGT TCAATTACGT chr3L:8787400-8787520 95 1.33e-05 ATGGGCTTAA CGTTACGT TTGTTATGTA chr2R:24744440-24744560 75 1.33e-05 CGGCAGTGGC CGTTACGT CGTCCGCGGG chr2R:21234696-21234816 53 1.33e-05 GTTTACGTTA CGTTACGT TATTTGGcga chr2R:4133309-4133429 23 1.33e-05 gaccggatgt cgttacgt agccggcaga chr3L:17951440-17951560 11 1.33e-05 atatacttta cgttacgt tacgcttaAT chr2R:9504638-9504758 53 1.33e-05 AATCCCCTTT CGTTACGT CGAACCTTAC chr3L:13223800-13223920 68 1.33e-05 ttaagcgttg cgttacgt tgtgttatgt chr3L:1100813-1100933 82 1.33e-05 TTAACGTATT CGTTACGT TACGCGCACT chr2R:15921350-15921470 36 1.33e-05 TCAACGTTAC CGTTACGT CCCACCCAAA chr3L:9364284-9364404 4 1.33e-05 aag cgttacgt tacgttaaca chrX:6584460-6584580 70 1.33e-05 cgttgcgtta cgttacgt tctgttacgt chr2L:18732407-18732527 43 1.33e-05 TTCTGCTCAG CGTTACGT GCTGCTGTTT chr2R:16660693-16660813 44 1.33e-05 TACAAGCTTC CGTTACGT TTTCATTGCA chr2L:8355558-8355678 66 1.33e-05 AGAAATGAAG CGTTACGT GAACTAGATA chr3L:9129886-9130006 81 1.33e-05 GGCTGCCTTA CGTTACGT CTTACGTGAG chr3L:22470430-22470550 96 1.33e-05 cgtaacgaat cgttacgt tCGACGGTGC chr2L:14520624-14520744 50 1.33e-05 tgctgcgtta cgttacgt taGTGTGCCC chr3R:30180036-30180156 109 2.69e-05 AAAATAAAAA CGTAACGT TTTA chr3R:4292232-4292352 78 2.69e-05 TTTCACGTAA CGTAACGT TTCCGTAAGC chr3R:18170201-18170321 57 2.69e-05 GTTATTTTGG CGTAACGT AAACCTCACT chr3L:17069060-17069180 37 2.69e-05 ATtgatgtaa cgtaacgt gacgtaacgt chr3L:4092841-4092961 10 2.69e-05 AAGAACTAA CGTAACGT ACAATTTGAA chr2R:10049368-10049488 77 2.69e-05 TTAACGTTAA CGTAACGT AATCAGCAGA chr3L:379040-379160 64 2.69e-05 ATTACGTAAG CGTAACGT AACTGGAACA chr3R:15054533-15054653 27 2.69e-05 TAAGGCCTCA CGTAACGT AATGGCACGT chrX:9164746-9164866 46 2.69e-05 CGGAGAAAAA CGTAACGT AAACTTAACG chr3L:19235479-19235599 84 2.69e-05 CCCGGAATCA CGTaacgt aatcaccaaa chrX:10730052-10730172 30 2.69e-05 cgtagcttcg cgtaacgt GTCTGTGATT chr2L:12201535-12201655 73 2.69e-05 cgtagcgtag cgtaacgt cacatcacgt chr2R:12981488-12981608 78 2.69e-05 GACTGCTCTA CGTAACGT AACAATGCAG chrX:2244892-2245012 91 2.69e-05 cgtaacgtaa cgtaacgt aCCAGTTTCC chr2L:21086293-21086413 96 2.69e-05 TTGCcgtata cgtaacgt gggcgtatta chrX:10807002-10807122 24 4.04e-05 CACGTTAGGT GGTTACGT TAAATGGCGT chrX:16557215-16557335 46 4.04e-05 CTAGGTTATG GGTTACGT TATGGGTTGG chr3L:18949288-18949408 87 4.04e-05 ATTTCAGATT GGTTACGT TAAGTGTGCG chr3L:21202983-21203103 84 4.04e-05 CCTTTTTGTG GGTTACGT TACCTTATTT chr3L:10985764-10985884 23 4.04e-05 CTAAGAATTG GGTTACGT AATTGGGTTA chr3R:17880610-17880730 104 4.04e-05 GGGAAAGGCG GGTTACGT TAAAAGTTA chr2L:17715989-17716109 65 4.04e-05 TGTTAGCACT GGTTACGT TTTGGTTTGT chr2R:20236201-20236321 53 5.92e-05 GCATTCATCG CATTACGT ATACGCCGCG chr3L:20524580-20524700 74 5.92e-05 ACGTCGAGTA CATTACGT ATGTGCCTTA chr3L:8331573-8331693 25 5.92e-05 AATGCGCTGG CATTACGT AGCCGCACAG chr3R:15290446-15290566 39 5.92e-05 cgctattact cattacgt tgcgcttacg chr2L:15760715-15760835 34 5.92e-05 ACTGGTTTTC CATTACGT TGTTGGCTCA chr3L:16470143-16470263 23 5.92e-05 TGTTACTTTA CATTACGT TTAATACATA chr2L:2724553-2724673 17 5.92e-05 AAAATGTTTT CATTACGT TGTATATAGC chr2L:19057931-19058051 65 5.92e-05 GCTAAAGAAC CATTACGT AAGCCATTAC chr2L:3171156-3171276 15 9.15e-05 AGAATATGTA TGTTACGT TACCGAACTG chr2L:7886049-7886169 39 9.15e-05 ATGCATTGCG TGTTACGT GATTCTGATA chr3R:10791608-10791728 93 9.15e-05 TACGTAAGCG TGTTACGT ATGCTCGCTT chr3L:16100205-16100325 66 9.15e-05 TGCCGGCTGT TGTTACGT TGTGTCTCTT chr3L:16854825-16854945 70 9.15e-05 TCGTTGCATT TGTTACGT TACGCACTCT chr3R:15340506-15340626 97 9.15e-05 GCTCAAGTTT TGTTACGT ACTTAATAGC chrX:2796442-2796562 58 1.20e-04 CGGACATTGA CGCTACGT AACGCTACAA chr3R:24104624-24104744 6 1.20e-04 CCAAG CTTTACGT AAGCCTTTGT chr3R:14655960-14656080 55 1.20e-04 CCACCGCCAC CTTTACGT TTTttatacc chr3L:13133944-13134064 39 1.20e-04 ACGTAATGCT CTTTACGT TGTTGTACAA chr2L:5195778-5195898 69 1.20e-04 ATGTGGAGCT CTTTACGT AGCAAGTTTA chrX:8060287-8060407 47 1.20e-04 TACGTCACCA CGCTACGT AGGCCACGTA chr3L:18743917-18744037 44 1.33e-04 TGGAAATTCC CCTTACGT GCAAATATTT chr3R:11500153-11500273 104 1.33e-04 GATGAGTGCT CCTTACGT AGCGTAAGG chr2R:6042531-6042651 61 1.33e-04 CGTAACGAAT CCTTACGT TTTGCTCATT chr2R:17484676-17484796 58 1.52e-04 AGTTcgtaaa cataacgt tgcgtatacg chr3L:8187470-8187590 101 1.52e-04 TCAACCAGAA CATAACGT AAGTTACAGT chr3L:7781700-7781820 71 1.61e-04 ACCCTCACTA CGTCACGT AGGCCACTTG chrX:3377486-3377606 41 1.61e-04 CGCAAGCTTA CGTCACGT CAATCATCTT chr2L:20083113-20083233 75 1.61e-04 ACGTTCACGA CGTCACGT CGCCACCGAT chr2L:8257539-8257659 54 1.61e-04 GAATGCAAGA CGTCACGT AAGCCACCGC chrX:1380911-1381031 96 1.71e-04 cgtcgtgttg cgttgcgt tgTTGTTTGC chrX:1467166-1467286 16 1.71e-04 CTTCCACTCT CGTTGCGT GAGAGGAAAT chr2R:22937257-22937377 77 2.18e-04 AAAGCACTCA GATTACGT AACAACTAAT chr3R:9543616-9543736 12 2.18e-04 AAAAGGCAAC TGTAACGT AATAGGCCGT chr2R:24891563-24891683 12 2.18e-04 TCGCCCTGCA GATTACGT CAAACGGAAA chr3L:9112026-9112146 57 2.18e-04 gcaacggaaa tgtaacgt aacTCGGAAA chr3L:22136407-22136527 109 2.18e-04 AACCGTTAAC CGTTACGC TTCC chrX:2296807-2296927 86 2.18e-04 acgtagtacg gattacgt attacgtaTG chr2L:16715573-16715693 18 2.18e-04 GTTTTGGCGT GATTACGT AAAATGCGTA chr3R:4445265-4445385 68 2.61e-04 AACACATACC CTTAACGT TCTAGGATTA chr3L:3810089-3810209 63 2.61e-04 TTTTGATTTA CGTTACGA AAGACCCGAT chr3L:16193100-16193220 82 2.61e-04 ATAAAGCATA CGCAACGT GTTTCCCTAC chr3L:9363922-9364042 97 2.61e-04 GATCCTTGTA CTTAACGT ATACAATGAG chr3R:26137400-26137520 93 2.61e-04 AGATGGCGTG CTTAACGT TTTTAGCTTT chr3R:18731412-18731532 62 2.61e-04 CAATACTTTT CGTTACGA AAGTTGTGTT chr3R:26537266-26537386 35 2.74e-04 TAGCGCAACG CCTAACGT AATCGCAATG chr2R:13235879-13235999 9 2.74e-04 ACGGGTTT CCTAACGT AAAGAGTTGT chr3L:327740-327860 2 3.02e-04 T GTTTACGT TTTTAGATCT chr2R:16160193-16160313 54 3.02e-04 CACATCTACA GTTTACGT ATGTGTATTT chr3R:17067926-17068046 51 3.02e-04 ACGCCGGTCT GTTTACGT AATGCCCTGG chr2L:16703155-16703275 40 3.02e-04 GTTTGTGATT GTTTACGT ATGGTTTTCT chr3R:5772515-5772635 5 3.02e-04 ATTT GTTTACGT CAAGCAATCC chr2L:18576399-18576519 2 3.02e-04 C GTTTACGT CACTGGTTCT chr3R:7186819-7186939 83 3.25e-04 TTTCGTATTC GCTTACGT TATGGCAATC chr2R:15680117-15680237 40 3.25e-04 ATTTTAGTAC CGTAGCGT AACGGTATCT chr3R:5268658-5268778 71 3.25e-04 AAAAAGATAC GCTTACGT TAATTCGTCT chr2R:21509724-21509844 74 3.25e-04 TGACTCATTC GCTTACGT TTTACGTTTT chr2L:21154016-21154136 19 3.81e-04 TAACGTTTTC GATAACGT ATCCCACATC chr3R:21203336-21203456 87 3.81e-04 TAAAAGTACT TATTACGT ATACGACGTG chrX:11868866-11868986 68 3.81e-04 TCGCCTTATC GATAACGT CGCAAATGTC chrX:7066707-7066827 24 3.81e-04 CTAGTTTGAA CGTAACGC CTTTTCATAA chr2R:16320653-16320773 32 3.81e-04 AACGCCGGGA TATTACGT TTTTTACGTG chrX:3482260-3482380 52 3.81e-04 ATTGGGATAA CGTAACGC TGTGTCGTAA chrX:1968327-1968447 29 3.81e-04 AATTTTGGCA TATTACGT ATACGTAATT chr3R:31097355-31097475 55 3.81e-04 CCGTCTACGT GATAACGT AAGGACTTAC chr3L:9424294-9424414 30 3.81e-04 CCGTGCACAG TATTACGT AACGGATTTT chr3L:20620403-20620523 63 3.81e-04 GCCAAAACAA CGTAACGC CTGGgacgta chr2R:11389054-11389174 15 3.81e-04 GTGTACTGGG TATTACGT TTTAAAAGAT chr2R:9503427-9503547 77 3.81e-04 ATTCGTTTAG CGTAACGC AATGCGCTGG chr3L:7808135-7808255 36 3.81e-04 CATTGCGTGT CGTAACGC TAAACGTCAA chr2R:6760428-6760548 7 3.81e-04 TGTTGG TATTACGT CTACATATGT chr3L:203721-203841 97 4.27e-04 CATCTTACGA CGTAACGA TTCGAAAATT chr3L:5823902-5824022 86 4.27e-04 GGGCTGTTGA CACTACGT TCTACTACTG chrX:19898056-19898176 104 4.27e-04 ACTTATTgtg cgtgacgt cagcgttct chr2L:8931306-8931426 20 4.27e-04 CGTACGTATA CGTAACGA ATTTAGCCAA chr2L:13332861-13332981 16 4.27e-04 ATTGTAATAA CGTAACGA CCATTTCATC chrX:1084466-1084586 91 4.46e-04 TACGTGAGTA GGTTACGC GACGTAGCCG chr2L:14588977-14589097 66 5.28e-04 GCTACAAATG GTTAACGT TATTACGCGT chr3L:17049458-17049578 98 5.28e-04 GTCGTACCGC TGCTACGT ACCGCTACCG chrX:2383289-2383409 87 5.28e-04 CTCTTTCTTG GGCAACGT AATTGAACAC chr3L:18304734-18304854 38 5.28e-04 CACGTAAGAG TGCTACGT CAAATAAAAC chr3R:19044784-19044904 60 5.28e-04 GACGACCCTG GTTAACGT TATCCAATAC chr2L:7473408-7473528 91 5.28e-04 ACTACGTTGT GGTTACGA TAACGCATTA chrX:16673030-16673150 19 5.55e-04 GACTAATGCG CTCTACGT AAAGCCCAAA chr2R:23083569-23083689 65 5.55e-04 TGTACATCTG CTCTACGT TGTACGTGAT chr4:358729-358849 99 6.00e-04 AGCATATCTC TCTTACGT CGTAATACCT chr3L:4440108-4440228 65 6.00e-04 CGTCTTCAAA CATTGCGT ACAATGATTT chr4:359002-359122 16 6.00e-04 TGCTTGCCTA TCTTACGT TAGTACTGCG chr2L:3171355-3171475 3 7.39e-04 CA CTTCACGT AAAAGGTCCT chr2L:3402576-3402696 7 7.39e-04 TTAACA CGCCACGT AAAGCGACAA chr3L:10985979-10986099 35 7.82e-04 GCGGCGTTTA CGCTGCGT TAGTTTTATG chrX:10877788-10877908 33 9.08e-04 AAATGCCAGT GGTAACGA TTGCACGCTG chr2L:6000136-6000256 51 9.08e-04 CGGTATTCTT TGCAACGT ATTTGGAGCC chr2L:19565347-19565467 96 9.08e-04 AATTTAGGTA TGCAACGT ATTTTGAGGG chr3R:19017537-19017657 34 9.59e-04 TGACGATGAG CTTTACGA TTTGGCCGGC chr3L:9426057-9426177 31 1.11e-03 GAGCGCGTCG CATGACGT AAAGATGTTT chr2R:11252078-11252198 6 1.11e-03 TTGAT CATAACGA TGAAGAATTA chr3R:22726622-22726742 99 1.16e-03 TATATTATCA GATTGCGT TGTTTACATG chr3R:16200634-16200754 51 1.16e-03 TTATTAAAAC GATTGCGT GAAGTGTAAA chr2R:6760631-6760751 33 1.16e-03 AGGATTGTAA GATTGCGT TGGGTTTAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:18440135-18440255 1.3e-05 71_[+1]_41 chr2L:7820566-7820686 1.3e-05 27_[+1]_85 chr2R:9456759-9456879 1.3e-05 76_[+1]_36 chr2L:7966546-7966666 1.3e-05 41_[+1]_71 chr3R:30532765-30532885 1.3e-05 106_[+1]_6 chr3L:9679086-9679206 1.3e-05 82_[+1]_30 chrX:6301279-6301399 1.3e-05 81_[+1]_31 chr3R:27700281-27700401 1.3e-05 67_[+1]_45 chr2R:21687630-21687750 1.3e-05 67_[+1]_45 chr2L:182714-182834 1.3e-05 38_[+1]_74 chr2L:16859110-16859230 1.3e-05 60_[+1]_52 chr3R:26853648-26853768 1.3e-05 51_[+1]_61 chr3L:16423162-16423282 1.3e-05 72_[+1]_40 chr2L:13484229-13484349 1.3e-05 51_[+1]_61 chr2L:22190475-22190595 1.3e-05 43_[+1]_69 chr3L:16378237-16378357 1.3e-05 106_[+1]_6 chr2L:7452235-7452355 1.3e-05 109_[+1]_3 chr3L:12193659-12193779 1.3e-05 95_[+1]_17 chr3L:8787400-8787520 1.3e-05 94_[+1]_18 chr2R:24744440-24744560 1.3e-05 74_[+1]_38 chr2R:21234696-21234816 1.3e-05 52_[+1]_60 chr2R:4133309-4133429 1.3e-05 22_[+1]_90 chr3L:17951440-17951560 1.3e-05 10_[+1]_102 chr2R:9504638-9504758 1.3e-05 52_[+1]_60 chr3L:13223800-13223920 1.3e-05 67_[+1]_45 chr3L:1100813-1100933 1.3e-05 81_[+1]_31 chr2R:15921350-15921470 1.3e-05 35_[+1]_77 chr3L:9364284-9364404 1.3e-05 3_[+1]_109 chrX:6584460-6584580 1.3e-05 69_[+1]_43 chr2L:18732407-18732527 1.3e-05 42_[+1]_70 chr2R:16660693-16660813 1.3e-05 43_[+1]_69 chr2L:8355558-8355678 1.3e-05 65_[+1]_47 chr3L:9129886-9130006 1.3e-05 80_[+1]_32 chr3L:22470430-22470550 1.3e-05 95_[+1]_17 chr2L:14520624-14520744 1.3e-05 49_[+1]_63 chr3R:30180036-30180156 2.7e-05 108_[+1]_4 chr3R:4292232-4292352 2.7e-05 77_[+1]_35 chr3R:18170201-18170321 2.7e-05 56_[+1]_56 chr3L:17069060-17069180 2.7e-05 36_[+1]_76 chr3L:4092841-4092961 2.7e-05 9_[+1]_103 chr2R:10049368-10049488 2.7e-05 76_[+1]_36 chr3L:379040-379160 2.7e-05 63_[+1]_49 chr3R:15054533-15054653 2.7e-05 26_[+1]_86 chrX:9164746-9164866 2.7e-05 45_[+1]_67 chr3L:19235479-19235599 2.7e-05 83_[+1]_29 chrX:10730052-10730172 2.7e-05 29_[+1]_83 chr2L:12201535-12201655 2.7e-05 72_[+1]_40 chr2R:12981488-12981608 2.7e-05 77_[+1]_35 chrX:2244892-2245012 2.7e-05 90_[+1]_22 chr2L:21086293-21086413 2.7e-05 95_[+1]_17 chrX:10807002-10807122 4e-05 23_[+1]_89 chrX:16557215-16557335 4e-05 45_[+1]_67 chr3L:18949288-18949408 4e-05 86_[+1]_26 chr3L:21202983-21203103 4e-05 83_[+1]_29 chr3L:10985764-10985884 4e-05 22_[+1]_90 chr3R:17880610-17880730 4e-05 103_[+1]_9 chr2L:17715989-17716109 4e-05 64_[+1]_48 chr2R:20236201-20236321 5.9e-05 52_[+1]_60 chr3L:20524580-20524700 5.9e-05 73_[+1]_39 chr3L:8331573-8331693 5.9e-05 24_[+1]_88 chr3R:15290446-15290566 5.9e-05 38_[+1]_74 chr2L:15760715-15760835 5.9e-05 33_[+1]_79 chr3L:16470143-16470263 5.9e-05 22_[+1]_90 chr2L:2724553-2724673 5.9e-05 16_[+1]_96 chr2L:19057931-19058051 5.9e-05 64_[+1]_48 chr2L:3171156-3171276 9.2e-05 14_[+1]_98 chr2L:7886049-7886169 9.2e-05 38_[+1]_74 chr3R:10791608-10791728 9.2e-05 92_[+1]_20 chr3L:16100205-16100325 9.2e-05 65_[+1]_47 chr3L:16854825-16854945 9.2e-05 69_[+1]_43 chr3R:15340506-15340626 9.2e-05 96_[+1]_16 chrX:2796442-2796562 0.00012 57_[+1]_55 chr3R:24104624-24104744 0.00012 5_[+1]_107 chr3R:14655960-14656080 0.00012 54_[+1]_58 chr3L:13133944-13134064 0.00012 38_[+1]_74 chr2L:5195778-5195898 0.00012 68_[+1]_44 chrX:8060287-8060407 0.00012 46_[+1]_66 chr3L:18743917-18744037 0.00013 43_[+1]_69 chr3R:11500153-11500273 0.00013 103_[+1]_9 chr2R:6042531-6042651 0.00013 60_[+1]_52 chr2R:17484676-17484796 0.00015 57_[+1]_55 chr3L:8187470-8187590 0.00015 100_[+1]_12 chr3L:7781700-7781820 0.00016 70_[+1]_42 chrX:3377486-3377606 0.00016 40_[+1]_72 chr2L:20083113-20083233 0.00016 74_[+1]_38 chr2L:8257539-8257659 0.00016 53_[+1]_59 chrX:1380911-1381031 0.00017 95_[+1]_17 chrX:1467166-1467286 0.00017 15_[+1]_97 chr2R:22937257-22937377 0.00022 76_[+1]_36 chr3R:9543616-9543736 0.00022 11_[+1]_101 chr2R:24891563-24891683 0.00022 11_[+1]_101 chr3L:9112026-9112146 0.00022 56_[+1]_56 chr3L:22136407-22136527 0.00022 108_[+1]_4 chrX:2296807-2296927 0.00022 85_[+1]_27 chr2L:16715573-16715693 0.00022 17_[+1]_95 chr3R:4445265-4445385 0.00026 67_[+1]_45 chr3L:3810089-3810209 0.00026 62_[+1]_50 chr3L:16193100-16193220 0.00026 81_[+1]_31 chr3L:9363922-9364042 0.00026 96_[+1]_16 chr3R:26137400-26137520 0.00026 92_[+1]_20 chr3R:18731412-18731532 0.00026 61_[+1]_51 chr3R:26537266-26537386 0.00027 34_[+1]_78 chr2R:13235879-13235999 0.00027 8_[+1]_104 chr3L:327740-327860 0.0003 1_[+1]_111 chr2R:16160193-16160313 0.0003 53_[+1]_59 chr3R:17067926-17068046 0.0003 50_[+1]_62 chr2L:16703155-16703275 0.0003 39_[+1]_73 chr3R:5772515-5772635 0.0003 4_[+1]_108 chr2L:18576399-18576519 0.0003 1_[+1]_111 chr3R:7186819-7186939 0.00033 82_[+1]_30 chr2R:15680117-15680237 0.00033 39_[+1]_73 chr3R:5268658-5268778 0.00033 70_[+1]_42 chr2R:21509724-21509844 0.00033 73_[+1]_39 chr2L:21154016-21154136 0.00038 18_[+1]_94 chr3R:21203336-21203456 0.00038 86_[+1]_26 chrX:11868866-11868986 0.00038 67_[+1]_45 chrX:7066707-7066827 0.00038 23_[+1]_89 chr2R:16320653-16320773 0.00038 31_[+1]_81 chrX:3482260-3482380 0.00038 51_[+1]_61 chrX:1968327-1968447 0.00038 28_[+1]_84 chr3R:31097355-31097475 0.00038 54_[+1]_58 chr3L:9424294-9424414 0.00038 29_[+1]_83 chr3L:20620403-20620523 0.00038 62_[+1]_50 chr2R:11389054-11389174 0.00038 14_[+1]_98 chr2R:9503427-9503547 0.00038 76_[+1]_36 chr3L:7808135-7808255 0.00038 35_[+1]_77 chr2R:6760428-6760548 0.00038 6_[+1]_106 chr3L:203721-203841 0.00043 96_[+1]_16 chr3L:5823902-5824022 0.00043 85_[+1]_27 chrX:19898056-19898176 0.00043 103_[+1]_9 chr2L:8931306-8931426 0.00043 19_[+1]_93 chr2L:13332861-13332981 0.00043 15_[+1]_97 chrX:1084466-1084586 0.00045 90_[+1]_22 chr2L:14588977-14589097 0.00053 65_[+1]_47 chr3L:17049458-17049578 0.00053 97_[+1]_15 chrX:2383289-2383409 0.00053 86_[+1]_26 chr3L:18304734-18304854 0.00053 37_[+1]_75 chr3R:19044784-19044904 0.00053 59_[+1]_53 chr2L:7473408-7473528 0.00053 90_[+1]_22 chrX:16673030-16673150 0.00055 18_[+1]_94 chr2R:23083569-23083689 0.00055 64_[+1]_48 chr4:358729-358849 0.0006 98_[+1]_14 chr3L:4440108-4440228 0.0006 64_[+1]_48 chr4:359002-359122 0.0006 15_[+1]_97 chr2L:3171355-3171475 0.00074 2_[+1]_110 chr2L:3402576-3402696 0.00074 6_[+1]_106 chr3L:10985979-10986099 0.00078 34_[+1]_78 chrX:10877788-10877908 0.00091 32_[+1]_80 chr2L:6000136-6000256 0.00091 50_[+1]_62 chr2L:19565347-19565467 0.00091 95_[+1]_17 chr3R:19017537-19017657 0.00096 33_[+1]_79 chr3L:9426057-9426177 0.0011 30_[+1]_82 chr2R:11252078-11252198 0.0011 5_[+1]_107 chr3R:22726622-22726742 0.0012 98_[+1]_14 chr3R:16200634-16200754 0.0012 50_[+1]_62 chr2R:6760631-6760751 0.0012 32_[+1]_80 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGTTACGT width=8 seqs=156 chr3L:18440135-18440255 ( 72) CGTTACGT 1 chr2L:7820566-7820686 ( 28) CGTTACGT 1 chr2R:9456759-9456879 ( 77) CGTTACGT 1 chr2L:7966546-7966666 ( 42) CGTTACGT 1 chr3R:30532765-30532885 ( 107) CGTTACGT 1 chr3L:9679086-9679206 ( 83) CGTTACGT 1 chrX:6301279-6301399 ( 82) CGTTACGT 1 chr3R:27700281-27700401 ( 68) CGTTACGT 1 chr2R:21687630-21687750 ( 68) CGTTACGT 1 chr2L:182714-182834 ( 39) CGTTACGT 1 chr2L:16859110-16859230 ( 61) CGTTACGT 1 chr3R:26853648-26853768 ( 52) CGTTACGT 1 chr3L:16423162-16423282 ( 73) CGTTACGT 1 chr2L:13484229-13484349 ( 52) CGTTACGT 1 chr2L:22190475-22190595 ( 44) CGTTACGT 1 chr3L:16378237-16378357 ( 107) CGTTACGT 1 chr2L:7452235-7452355 ( 110) CGTTACGT 1 chr3L:12193659-12193779 ( 96) CGTTACGT 1 chr3L:8787400-8787520 ( 95) CGTTACGT 1 chr2R:24744440-24744560 ( 75) CGTTACGT 1 chr2R:21234696-21234816 ( 53) CGTTACGT 1 chr2R:4133309-4133429 ( 23) CGTTACGT 1 chr3L:17951440-17951560 ( 11) CGTTACGT 1 chr2R:9504638-9504758 ( 53) CGTTACGT 1 chr3L:13223800-13223920 ( 68) CGTTACGT 1 chr3L:1100813-1100933 ( 82) CGTTACGT 1 chr2R:15921350-15921470 ( 36) CGTTACGT 1 chr3L:9364284-9364404 ( 4) CGTTACGT 1 chrX:6584460-6584580 ( 70) CGTTACGT 1 chr2L:18732407-18732527 ( 43) CGTTACGT 1 chr2R:16660693-16660813 ( 44) CGTTACGT 1 chr2L:8355558-8355678 ( 66) CGTTACGT 1 chr3L:9129886-9130006 ( 81) CGTTACGT 1 chr3L:22470430-22470550 ( 96) CGTTACGT 1 chr2L:14520624-14520744 ( 50) CGTTACGT 1 chr3R:30180036-30180156 ( 109) CGTAACGT 1 chr3R:4292232-4292352 ( 78) CGTAACGT 1 chr3R:18170201-18170321 ( 57) CGTAACGT 1 chr3L:17069060-17069180 ( 37) CGTAACGT 1 chr3L:4092841-4092961 ( 10) CGTAACGT 1 chr2R:10049368-10049488 ( 77) CGTAACGT 1 chr3L:379040-379160 ( 64) CGTAACGT 1 chr3R:15054533-15054653 ( 27) CGTAACGT 1 chrX:9164746-9164866 ( 46) CGTAACGT 1 chr3L:19235479-19235599 ( 84) CGTAACGT 1 chrX:10730052-10730172 ( 30) CGTAACGT 1 chr2L:12201535-12201655 ( 73) CGTAACGT 1 chr2R:12981488-12981608 ( 78) CGTAACGT 1 chrX:2244892-2245012 ( 91) CGTAACGT 1 chr2L:21086293-21086413 ( 96) CGTAACGT 1 chrX:10807002-10807122 ( 24) GGTTACGT 1 chrX:16557215-16557335 ( 46) GGTTACGT 1 chr3L:18949288-18949408 ( 87) GGTTACGT 1 chr3L:21202983-21203103 ( 84) GGTTACGT 1 chr3L:10985764-10985884 ( 23) GGTTACGT 1 chr3R:17880610-17880730 ( 104) GGTTACGT 1 chr2L:17715989-17716109 ( 65) GGTTACGT 1 chr2R:20236201-20236321 ( 53) CATTACGT 1 chr3L:20524580-20524700 ( 74) CATTACGT 1 chr3L:8331573-8331693 ( 25) CATTACGT 1 chr3R:15290446-15290566 ( 39) CATTACGT 1 chr2L:15760715-15760835 ( 34) CATTACGT 1 chr3L:16470143-16470263 ( 23) CATTACGT 1 chr2L:2724553-2724673 ( 17) CATTACGT 1 chr2L:19057931-19058051 ( 65) CATTACGT 1 chr2L:3171156-3171276 ( 15) TGTTACGT 1 chr2L:7886049-7886169 ( 39) TGTTACGT 1 chr3R:10791608-10791728 ( 93) TGTTACGT 1 chr3L:16100205-16100325 ( 66) TGTTACGT 1 chr3L:16854825-16854945 ( 70) TGTTACGT 1 chr3R:15340506-15340626 ( 97) TGTTACGT 1 chrX:2796442-2796562 ( 58) CGCTACGT 1 chr3R:24104624-24104744 ( 6) CTTTACGT 1 chr3R:14655960-14656080 ( 55) CTTTACGT 1 chr3L:13133944-13134064 ( 39) CTTTACGT 1 chr2L:5195778-5195898 ( 69) CTTTACGT 1 chrX:8060287-8060407 ( 47) CGCTACGT 1 chr3L:18743917-18744037 ( 44) CCTTACGT 1 chr3R:11500153-11500273 ( 104) CCTTACGT 1 chr2R:6042531-6042651 ( 61) CCTTACGT 1 chr2R:17484676-17484796 ( 58) CATAACGT 1 chr3L:8187470-8187590 ( 101) CATAACGT 1 chr3L:7781700-7781820 ( 71) CGTCACGT 1 chrX:3377486-3377606 ( 41) CGTCACGT 1 chr2L:20083113-20083233 ( 75) CGTCACGT 1 chr2L:8257539-8257659 ( 54) CGTCACGT 1 chrX:1380911-1381031 ( 96) CGTTGCGT 1 chrX:1467166-1467286 ( 16) CGTTGCGT 1 chr2R:22937257-22937377 ( 77) GATTACGT 1 chr3R:9543616-9543736 ( 12) TGTAACGT 1 chr2R:24891563-24891683 ( 12) GATTACGT 1 chr3L:9112026-9112146 ( 57) TGTAACGT 1 chr3L:22136407-22136527 ( 109) CGTTACGC 1 chrX:2296807-2296927 ( 86) GATTACGT 1 chr2L:16715573-16715693 ( 18) GATTACGT 1 chr3R:4445265-4445385 ( 68) CTTAACGT 1 chr3L:3810089-3810209 ( 63) CGTTACGA 1 chr3L:16193100-16193220 ( 82) CGCAACGT 1 chr3L:9363922-9364042 ( 97) CTTAACGT 1 chr3R:26137400-26137520 ( 93) CTTAACGT 1 chr3R:18731412-18731532 ( 62) CGTTACGA 1 chr3R:26537266-26537386 ( 35) CCTAACGT 1 chr2R:13235879-13235999 ( 9) CCTAACGT 1 chr3L:327740-327860 ( 2) GTTTACGT 1 chr2R:16160193-16160313 ( 54) GTTTACGT 1 chr3R:17067926-17068046 ( 51) GTTTACGT 1 chr2L:16703155-16703275 ( 40) GTTTACGT 1 chr3R:5772515-5772635 ( 5) GTTTACGT 1 chr2L:18576399-18576519 ( 2) GTTTACGT 1 chr3R:7186819-7186939 ( 83) GCTTACGT 1 chr2R:15680117-15680237 ( 40) CGTAGCGT 1 chr3R:5268658-5268778 ( 71) GCTTACGT 1 chr2R:21509724-21509844 ( 74) GCTTACGT 1 chr2L:21154016-21154136 ( 19) GATAACGT 1 chr3R:21203336-21203456 ( 87) TATTACGT 1 chrX:11868866-11868986 ( 68) GATAACGT 1 chrX:7066707-7066827 ( 24) CGTAACGC 1 chr2R:16320653-16320773 ( 32) TATTACGT 1 chrX:3482260-3482380 ( 52) CGTAACGC 1 chrX:1968327-1968447 ( 29) TATTACGT 1 chr3R:31097355-31097475 ( 55) GATAACGT 1 chr3L:9424294-9424414 ( 30) TATTACGT 1 chr3L:20620403-20620523 ( 63) CGTAACGC 1 chr2R:11389054-11389174 ( 15) TATTACGT 1 chr2R:9503427-9503547 ( 77) CGTAACGC 1 chr3L:7808135-7808255 ( 36) CGTAACGC 1 chr2R:6760428-6760548 ( 7) TATTACGT 1 chr3L:203721-203841 ( 97) CGTAACGA 1 chr3L:5823902-5824022 ( 86) CACTACGT 1 chrX:19898056-19898176 ( 104) CGTGACGT 1 chr2L:8931306-8931426 ( 20) CGTAACGA 1 chr2L:13332861-13332981 ( 16) CGTAACGA 1 chrX:1084466-1084586 ( 91) GGTTACGC 1 chr2L:14588977-14589097 ( 66) GTTAACGT 1 chr3L:17049458-17049578 ( 98) TGCTACGT 1 chrX:2383289-2383409 ( 87) GGCAACGT 1 chr3L:18304734-18304854 ( 38) TGCTACGT 1 chr3R:19044784-19044904 ( 60) GTTAACGT 1 chr2L:7473408-7473528 ( 91) GGTTACGA 1 chrX:16673030-16673150 ( 19) CTCTACGT 1 chr2R:23083569-23083689 ( 65) CTCTACGT 1 chr4:358729-358849 ( 99) TCTTACGT 1 chr3L:4440108-4440228 ( 65) CATTGCGT 1 chr4:359002-359122 ( 16) TCTTACGT 1 chr2L:3171355-3171475 ( 3) CTTCACGT 1 chr2L:3402576-3402696 ( 7) CGCCACGT 1 chr3L:10985979-10986099 ( 35) CGCTGCGT 1 chrX:10877788-10877908 ( 33) GGTAACGA 1 chr2L:6000136-6000256 ( 51) TGCAACGT 1 chr2L:19565347-19565467 ( 96) TGCAACGT 1 chr3R:19017537-19017657 ( 34) CTTTACGA 1 chr3L:9426057-9426177 ( 31) CATGACGT 1 chr2R:11252078-11252198 ( 6) CATAACGA 1 chr3R:22726622-22726742 ( 99) GATTGCGT 1 chr3R:16200634-16200754 ( 51) GATTGCGT 1 chr2R:6760631-6760751 ( 33) GATTGCGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.95524 E= 9.4e-097 -1393 169 -3 -117 -62 -169 157 -124 -1393 -131 -1393 167 -7 -243 -403 121 168 -1393 -203 -1393 -1393 227 -1393 -1393 -1393 -1393 226 -1393 -235 -220 -1393 164 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 156 E= 9.4e-097 0.000000 0.666667 0.205128 0.128205 0.192308 0.064103 0.621795 0.121795 0.000000 0.083333 0.000000 0.916667 0.282051 0.038462 0.012821 0.666667 0.948718 0.000000 0.051282 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.057692 0.044872 0.000000 0.897436 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGTTACGT MEME-1 regular expression -------------------------------------------------------------------------------- [CG]GT[TA]ACGT -------------------------------------------------------------------------------- Time 9.89 secs. ******************************************************************************** ******************************************************************************** MOTIF WWACGTAA MEME-2 width = 8 sites = 106 llr = 792 E-value = 1.6e-032 ******************************************************************************** -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 43a:::78 pos.-specific C 2::a:::: probability G :1::a::: matrix T 45:::a32 bits 2.3 ** 2.0 ** 1.8 **** 1.6 **** Relative 1.4 **** Entropy 1.1 **** * (10.8 bits) 0.9 ****** 0.7 ****** 0.5 * ****** 0.2 ******** 0.0 -------- Multilevel ATACGTAA consensus TA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:10877788-10877908 100 5.42e-05 TTTGAACTTG ATACGTAA ATAAATTACG chr3L:23714887-23715007 107 5.42e-05 ATTCCATTAC TTACGTAA ATATTA chrX:428299-428419 101 5.42e-05 TCATATATGT ATACGTAA GGCTTGCCAT chr3L:8331573-8331693 4 5.42e-05 CGT ATACGTAA TGCAATGCGC chr3R:13645541-13645661 81 5.42e-05 AGCTTTGCAT TTACGTAA CAGAGTAGGC chr3L:379040-379160 55 5.42e-05 AGTATAAACA TTACGTAA GCGTAACGTA chr3L:16193100-16193220 46 5.42e-05 ACGGTGGCGT ATACGTAA CTTGCGTAGC chr2L:6873579-6873699 101 5.42e-05 gtaactgcgt atacgtaA TTTTAATATA chr3L:21202983-21203103 5 5.42e-05 tacg atacgtaa tatacgtata chr2L:22190475-22190595 64 5.42e-05 ATTTGGTGGG TTACGTAA TAGCCGCGCG chrX:1968327-1968447 37 5.42e-05 CATATTACGT ATACGTAA TTTTTGGAAT chr3R:10791608-10791728 82 5.42e-05 ATTTTCAAAA ATACGTAA GCGTGTTACG chr3L:9424294-9424414 76 5.42e-05 TGAGATACGT ATACGTAA GGCGGTGGGG chr2R:7407372-7407492 36 5.42e-05 CGCGAACGTA ATACGTAA GCAAGTCAAA chr2L:3357368-3357488 84 5.42e-05 TACGATCGCA ATACGTAA GTTATAACAT chr3L:13133944-13134064 19 5.42e-05 CGCCGAAACT TTACGTAA ACACGTAATG chr2R:9503427-9503547 52 5.42e-05 ATGTGGAGCA ATACGTAA GACCCACATT chrX:2214184-2214304 1 5.42e-05 . ATACGTAA TATTCTATTA chr2R:16660693-16660813 108 5.42e-05 AGTTACGCAG TTACGTAA GCAAC chr2R:17484676-17484796 71 5.42e-05 aacgttgcgt atacgtaa cataacggaa chr3L:22470430-22470550 83 5.42e-05 tttcgttacg ttacgtaa cgaatcgtta chr2R:21509724-21509844 90 5.42e-05 GTTTTACGTT TTACGTAA CGGAACGCGA chr2L:18576399-18576519 70 5.42e-05 GACATAAACC ATACGTAA GAGTGAATAC chr2R:9584583-9584703 62 1.09e-04 CACCAGGCGA AAACGTAA ACAAAGTCTG chr2R:22937257-22937377 44 1.09e-04 TCATAAGAGA AAACGTAA TACTCTAATA chr3R:4445265-4445385 5 1.09e-04 AATA AAACGTAA CCAAAATGCT chrX:22455163-22455283 45 1.09e-04 GGCAACACTA AAACGTAA TGCGACGCGA chr2L:21154016-21154136 107 1.09e-04 ATCTCTCTAA AAACGTAA ACATAA chr3L:17069060-17069180 49 1.09e-04 taacgtgacg taacgtaa cgAGGCATGT chr2R:19475951-19476071 98 1.09e-04 GCGTAAGAAG TAACGTAA GCGAACACGA chr2L:4442347-4442467 91 1.09e-04 AAAACAAGAA AAACGTAA ACAGATCGGA chr2R:12692650-12692770 19 1.09e-04 ACACTTAGCA AAACGTAA TGTAAACAAA chrX:16673030-16673150 34 1.09e-04 CGTAAAGCCC AAACGTAA CTTTCGATTG chr3R:24357896-24358016 98 1.09e-04 ACTCTAAAAG TAACGTAA TTTTGAAAAA chr3R:15417894-15418014 112 1.09e-04 GTAAAGTAAC TAACGTAA C chr3R:26137400-26137520 74 1.09e-04 TACATTTGAA AAACGTAA GAGATGGCGT chr3L:18304734-18304854 52 1.09e-04 ACGTCAAATA AAACGTAA GCTCTTTGGG chr2L:19565347-19565467 14 1.09e-04 TAAAGTATAA AAACGTAA TTGCAAAAGA chr3L:9112026-9112146 72 1.09e-04 cgtaacTCGG AAACGTAA ACTCAACAAA chr3R:29146877-29146997 24 1.09e-04 CGGCCATACA AAACGTAA ACAAATGCAA chr3L:19235479-19235599 60 1.09e-04 GAGCTACGTG AAACGTAA GGCCTGCCCG chr2L:4614137-4614257 1 1.09e-04 . AAACGTAA GCGACCAAAT chr3L:22136607-22136727 111 1.09e-04 CGATTACCAT AAACGTAA AC chr2L:8355558-8355678 49 1.09e-04 CAATTCCACA AAACGTAA GAAATGAAGC chrX:2244892-2245012 83 1.09e-04 aatgtaaccg taacgtaa cgtaacgtaC chrX:8060287-8060407 7 1.09e-04 CAAATG TAACGTAA CCCACAACGT chr3R:15147984-15148104 62 1.09e-04 TTTTTTGAAA AAACGTAA GCAAGTAACG chr3R:9545944-9546064 80 1.29e-04 ACGATATCTT CTACGTAA CTTCACACTG chr2L:3402576-3402696 39 1.29e-04 GTAATGGCGA CTACGTAA ACGAAGCAAA chrX:1084466-1084586 10 1.29e-04 TTACGTTAA CTACGTAA AGAACCTAGG chr2L:13484229-13484349 64 1.29e-04 TTACGTCGCG CTACGTAA CGACATAACC chr3L:5980271-5980391 55 1.29e-04 CTTTTTCCTT CTACGTAA TGATTCCGAT chr3L:16595260-16595380 43 1.82e-04 CGAGATAAAT TTACGTTA CATCCCCACT chr3L:18440135-18440255 54 1.82e-04 CGTTTTACCA TTACGTTA CTTACCCCGC chr2L:182714-182834 58 1.82e-04 AAAGAGTTGT TTACGTTA CGGTAGTACC chr3R:26853648-26853768 84 1.82e-04 ttgactgacc ttacgtta TGCTCACATA chr3L:16423162-16423282 53 1.82e-04 GCTTAGCTAA ttacgtta cgttacgcta chr3L:12193659-12193779 108 1.82e-04 TTACGTTCAA TTACGTTA ACCGT chr2R:21234696-21234816 45 1.82e-04 AACACAGTGT TTACGTTA CGTTACGTTA chrX:15292924-15293044 32 1.82e-04 TTTAAGTAAC TTACGTTA TGGGCTATAT chr3L:13223800-13223920 53 1.82e-04 TGAAAGGCTA ttacgtta agcgttgcgt chr2R:15921350-15921470 14 1.82e-04 GGGGAGGGTT ATACGTTA CACTTCAACG chr2L:17715989-17716109 92 1.82e-04 TGTACTGAGT TTACGTTA CGATTACGTA chr3L:1756246-1756366 92 2.01e-04 TGGACGTAAA CAACGTAA AATCGGGAAA chr3R:17718945-17719065 96 2.01e-04 TAAACAACAT CAACGTAA TTAATCCACA chr2L:12201535-12201655 104 2.01e-04 gtcTTCCGTA CAACGTAA AAAAAAGTG chr2L:8619783-8619903 110 2.54e-04 AAGCTTTCGT ATACGTAT ACG chr2L:3171156-3171276 84 2.54e-04 ATTATAATAA ATACGTAT TTGGTACGTA chr3R:27700281-27700401 34 2.54e-04 CACTATTTCA ATACGTAT GCACATTGCT chr3R:9543616-9543736 63 2.54e-04 AATACATTGG ATACGTAT ATATATATTT chr2L:35567-35687 13 2.54e-04 GTCTTATCGT ATACGTAT AAACGGTGTT chrX:2296807-2296927 95 2.54e-04 ggattacgta ttacgtaT GGGCAGTTGC chr2L:13332861-13332981 34 2.54e-04 CCATTTCATC TTACGTAT ACGTGATATG chr2L:21086293-21086413 111 2.54e-04 cgtgggcgta ttacgtat ac chrX:9106584-9106704 81 3.48e-04 GTTTTTCTTA AGACGTAA GAAAACCAAA chr2R:16160193-16160313 92 3.48e-04 GCGGTCGCTT TGACGTAA CACATTACGA chr3L:17049458-17049578 2 3.48e-04 T TAACGTTA ACTACAACGA chr2R:10049368-10049488 68 3.48e-04 GAAACCGCAT TAACGTTA ACGTAACGTA chr3R:24104624-24104744 64 3.48e-04 ATTAGCAGTT AAACGTTA AACACGCACA chr3L:13903885-13904005 27 3.48e-04 CCTAAAATGT AGACGTAA TTGTGCACTA chr3R:30532765-30532885 5 3.67e-04 GGCT CTACGTTA TTCCGTTGTC chr3L:9679086-9679206 47 3.67e-04 TTGACCAGGG CTACGTTA GAAACTTGCC chr3L:1100813-1100933 73 4.21e-04 tATGGGTGTT TAACGTAT TCGTTACGTT chr3R:4292232-4292352 70 4.78e-04 CATTTATTTT TCACGTAA CGTAACGTTT chr3L:18743917-18744037 65 4.78e-04 AATATTTTAC TCACGTAA AGTAGAAAAT chr3R:9416887-9417007 12 4.78e-04 GTAATCCATA CTACGTAT CATTTATTTA chrX:10730052-10730172 3 4.78e-04 cg tcacgtaa ggagcctagc chr2R:6760428-6760548 61 4.78e-04 TTTGGTTTTG ACACGTAA GGAGTTTCCG chrX:1466961-1467081 73 5.11e-04 CGTTTACGAG CGACGTAA GGTGTTTGCG chr3R:19017537-19017657 109 5.11e-04 gaacaTTGGG CGACGTAA CACG chr3R:15054533-15054653 12 5.11e-04 TAAAAACGAA CGACGTAA GGCCTCACGT chr2L:8257539-8257659 87 5.11e-04 CGTTAACAGT CGACGTAA GAGTTAACAT chr2R:21687630-21687750 58 5.63e-04 TGGCTGGGTC TTACGTTT ATCGTTACGT chr3R:22424929-22425049 100 5.63e-04 GAGAATTCGA ATACGTTT ACAGACTCTG chr3R:5772515-5772635 86 5.63e-04 ACATTCACAT ATACGTTT CTTTCCATCT chr3L:16470143-16470263 6 5.63e-04 GTTGT TTACGTTT GTTACTTTAC chr3R:31097355-31097475 69 5.63e-04 ACGTAAGGAC TTACGTTT TCCCACTGCT chr3L:16854825-16854945 99 5.63e-04 CATTACGATA TTACGTTT ATGCGGGCGA chr3L:9364284-9364404 26 5.63e-04 ttaacatgcc ttacgttT GAGGTTTGTT chrX:6584460-6584580 92 5.63e-04 ttacgttctg ttacgttt tgctcgttcg chr3L:3810089-3810209 86 6.02e-04 CCGATTGTTT TGACGTTA AACAAGCAGC chr2L:5195778-5195898 100 6.02e-04 CGGCCCCAGT TGACGTTA ACTTCGAACC chr3L:4092841-4092961 40 6.35e-04 CACTGCTTTA CCACGTAA GCTTGAGGAA chr3R:9417091-9417211 36 7.26e-04 TAACTATAAC TAACGTTT AACTGTAAAG chr2R:10026419-10026539 3 7.26e-04 AC AAACGTTT AAGATGCAAT chr4:359002-359122 63 7.26e-04 ATAAGAGCAT AAACGTTT CTTTACACTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:10877788-10877908 5.4e-05 99_[+2]_13 chr3L:23714887-23715007 5.4e-05 106_[+2]_6 chrX:428299-428419 5.4e-05 100_[+2]_12 chr3L:8331573-8331693 5.4e-05 3_[+2]_109 chr3R:13645541-13645661 5.4e-05 80_[+2]_32 chr3L:379040-379160 5.4e-05 54_[+2]_58 chr3L:16193100-16193220 5.4e-05 45_[+2]_67 chr2L:6873579-6873699 5.4e-05 100_[+2]_12 chr3L:21202983-21203103 5.4e-05 4_[+2]_108 chr2L:22190475-22190595 5.4e-05 63_[+2]_49 chrX:1968327-1968447 5.4e-05 36_[+2]_76 chr3R:10791608-10791728 5.4e-05 81_[+2]_31 chr3L:9424294-9424414 5.4e-05 75_[+2]_37 chr2R:7407372-7407492 5.4e-05 35_[+2]_77 chr2L:3357368-3357488 5.4e-05 83_[+2]_29 chr3L:13133944-13134064 5.4e-05 18_[+2]_94 chr2R:9503427-9503547 5.4e-05 51_[+2]_61 chrX:2214184-2214304 5.4e-05 [+2]_112 chr2R:16660693-16660813 5.4e-05 107_[+2]_5 chr2R:17484676-17484796 5.4e-05 70_[+2]_42 chr3L:22470430-22470550 5.4e-05 82_[+2]_30 chr2R:21509724-21509844 5.4e-05 89_[+2]_23 chr2L:18576399-18576519 5.4e-05 69_[+2]_43 chr2R:9584583-9584703 0.00011 61_[+2]_51 chr2R:22937257-22937377 0.00011 43_[+2]_69 chr3R:4445265-4445385 0.00011 4_[+2]_108 chrX:22455163-22455283 0.00011 44_[+2]_68 chr2L:21154016-21154136 0.00011 106_[+2]_6 chr3L:17069060-17069180 0.00011 48_[+2]_64 chr2R:19475951-19476071 0.00011 97_[+2]_15 chr2L:4442347-4442467 0.00011 90_[+2]_22 chr2R:12692650-12692770 0.00011 18_[+2]_94 chrX:16673030-16673150 0.00011 33_[+2]_79 chr3R:24357896-24358016 0.00011 97_[+2]_15 chr3R:15417894-15418014 0.00011 111_[+2]_1 chr3R:26137400-26137520 0.00011 73_[+2]_39 chr3L:18304734-18304854 0.00011 51_[+2]_61 chr2L:19565347-19565467 0.00011 13_[+2]_99 chr3L:9112026-9112146 0.00011 71_[+2]_41 chr3R:29146877-29146997 0.00011 23_[+2]_89 chr3L:19235479-19235599 0.00011 59_[+2]_53 chr2L:4614137-4614257 0.00011 [+2]_112 chr3L:22136607-22136727 0.00011 110_[+2]_2 chr2L:8355558-8355678 0.00011 48_[+2]_64 chrX:2244892-2245012 0.00011 82_[+2]_30 chrX:8060287-8060407 0.00011 6_[+2]_106 chr3R:15147984-15148104 0.00011 61_[+2]_51 chr3R:9545944-9546064 0.00013 79_[+2]_33 chr2L:3402576-3402696 0.00013 38_[+2]_74 chrX:1084466-1084586 0.00013 9_[+2]_103 chr2L:13484229-13484349 0.00013 63_[+2]_49 chr3L:5980271-5980391 0.00013 54_[+2]_58 chr3L:16595260-16595380 0.00018 42_[+2]_70 chr3L:18440135-18440255 0.00018 53_[+2]_59 chr2L:182714-182834 0.00018 57_[+2]_55 chr3R:26853648-26853768 0.00018 83_[+2]_29 chr3L:16423162-16423282 0.00018 52_[+2]_60 chr3L:12193659-12193779 0.00018 107_[+2]_5 chr2R:21234696-21234816 0.00018 44_[+2]_68 chrX:15292924-15293044 0.00018 31_[+2]_81 chr3L:13223800-13223920 0.00018 52_[+2]_60 chr2R:15921350-15921470 0.00018 13_[+2]_99 chr2L:17715989-17716109 0.00018 91_[+2]_21 chr3L:1756246-1756366 0.0002 91_[+2]_21 chr3R:17718945-17719065 0.0002 95_[+2]_17 chr2L:12201535-12201655 0.0002 103_[+2]_9 chr2L:8619783-8619903 0.00025 109_[+2]_3 chr2L:3171156-3171276 0.00025 83_[+2]_29 chr3R:27700281-27700401 0.00025 33_[+2]_79 chr3R:9543616-9543736 0.00025 62_[+2]_50 chr2L:35567-35687 0.00025 12_[+2]_100 chrX:2296807-2296927 0.00025 94_[+2]_18 chr2L:13332861-13332981 0.00025 33_[+2]_79 chr2L:21086293-21086413 0.00025 110_[+2]_2 chrX:9106584-9106704 0.00035 80_[+2]_32 chr2R:16160193-16160313 0.00035 91_[+2]_21 chr3L:17049458-17049578 0.00035 1_[+2]_111 chr2R:10049368-10049488 0.00035 67_[+2]_45 chr3R:24104624-24104744 0.00035 63_[+2]_49 chr3L:13903885-13904005 0.00035 26_[+2]_86 chr3R:30532765-30532885 0.00037 4_[+2]_108 chr3L:9679086-9679206 0.00037 46_[+2]_66 chr3L:1100813-1100933 0.00042 72_[+2]_40 chr3R:4292232-4292352 0.00048 69_[+2]_43 chr3L:18743917-18744037 0.00048 64_[+2]_48 chr3R:9416887-9417007 0.00048 11_[+2]_101 chrX:10730052-10730172 0.00048 2_[+2]_110 chr2R:6760428-6760548 0.00048 60_[+2]_52 chrX:1466961-1467081 0.00051 72_[+2]_40 chr3R:19017537-19017657 0.00051 108_[+2]_4 chr3R:15054533-15054653 0.00051 11_[+2]_101 chr2L:8257539-8257659 0.00051 86_[+2]_26 chr2R:21687630-21687750 0.00056 57_[+2]_55 chr3R:22424929-22425049 0.00056 99_[+2]_13 chr3R:5772515-5772635 0.00056 85_[+2]_27 chr3L:16470143-16470263 0.00056 5_[+2]_107 chr3R:31097355-31097475 0.00056 68_[+2]_44 chr3L:16854825-16854945 0.00056 98_[+2]_14 chr3L:9364284-9364404 0.00056 25_[+2]_87 chrX:6584460-6584580 0.00056 91_[+2]_21 chr3L:3810089-3810209 0.0006 85_[+2]_27 chr2L:5195778-5195898 0.0006 99_[+2]_13 chr3L:4092841-4092961 0.00063 39_[+2]_73 chr3R:9417091-9417211 0.00073 35_[+2]_77 chr2R:10026419-10026539 0.00073 2_[+2]_110 chr4:359002-359122 0.00073 62_[+2]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WWACGTAA width=8 seqs=106 chrX:10877788-10877908 ( 100) ATACGTAA 1 chr3L:23714887-23715007 ( 107) TTACGTAA 1 chrX:428299-428419 ( 101) ATACGTAA 1 chr3L:8331573-8331693 ( 4) ATACGTAA 1 chr3R:13645541-13645661 ( 81) TTACGTAA 1 chr3L:379040-379160 ( 55) TTACGTAA 1 chr3L:16193100-16193220 ( 46) ATACGTAA 1 chr2L:6873579-6873699 ( 101) ATACGTAA 1 chr3L:21202983-21203103 ( 5) ATACGTAA 1 chr2L:22190475-22190595 ( 64) TTACGTAA 1 chrX:1968327-1968447 ( 37) ATACGTAA 1 chr3R:10791608-10791728 ( 82) ATACGTAA 1 chr3L:9424294-9424414 ( 76) ATACGTAA 1 chr2R:7407372-7407492 ( 36) ATACGTAA 1 chr2L:3357368-3357488 ( 84) ATACGTAA 1 chr3L:13133944-13134064 ( 19) TTACGTAA 1 chr2R:9503427-9503547 ( 52) ATACGTAA 1 chrX:2214184-2214304 ( 1) ATACGTAA 1 chr2R:16660693-16660813 ( 108) TTACGTAA 1 chr2R:17484676-17484796 ( 71) ATACGTAA 1 chr3L:22470430-22470550 ( 83) TTACGTAA 1 chr2R:21509724-21509844 ( 90) TTACGTAA 1 chr2L:18576399-18576519 ( 70) ATACGTAA 1 chr2R:9584583-9584703 ( 62) AAACGTAA 1 chr2R:22937257-22937377 ( 44) AAACGTAA 1 chr3R:4445265-4445385 ( 5) AAACGTAA 1 chrX:22455163-22455283 ( 45) AAACGTAA 1 chr2L:21154016-21154136 ( 107) AAACGTAA 1 chr3L:17069060-17069180 ( 49) TAACGTAA 1 chr2R:19475951-19476071 ( 98) TAACGTAA 1 chr2L:4442347-4442467 ( 91) AAACGTAA 1 chr2R:12692650-12692770 ( 19) AAACGTAA 1 chrX:16673030-16673150 ( 34) AAACGTAA 1 chr3R:24357896-24358016 ( 98) TAACGTAA 1 chr3R:15417894-15418014 ( 112) TAACGTAA 1 chr3R:26137400-26137520 ( 74) AAACGTAA 1 chr3L:18304734-18304854 ( 52) AAACGTAA 1 chr2L:19565347-19565467 ( 14) AAACGTAA 1 chr3L:9112026-9112146 ( 72) AAACGTAA 1 chr3R:29146877-29146997 ( 24) AAACGTAA 1 chr3L:19235479-19235599 ( 60) AAACGTAA 1 chr2L:4614137-4614257 ( 1) AAACGTAA 1 chr3L:22136607-22136727 ( 111) AAACGTAA 1 chr2L:8355558-8355678 ( 49) AAACGTAA 1 chrX:2244892-2245012 ( 83) TAACGTAA 1 chrX:8060287-8060407 ( 7) TAACGTAA 1 chr3R:15147984-15148104 ( 62) AAACGTAA 1 chr3R:9545944-9546064 ( 80) CTACGTAA 1 chr2L:3402576-3402696 ( 39) CTACGTAA 1 chrX:1084466-1084586 ( 10) CTACGTAA 1 chr2L:13484229-13484349 ( 64) CTACGTAA 1 chr3L:5980271-5980391 ( 55) CTACGTAA 1 chr3L:16595260-16595380 ( 43) TTACGTTA 1 chr3L:18440135-18440255 ( 54) TTACGTTA 1 chr2L:182714-182834 ( 58) TTACGTTA 1 chr3R:26853648-26853768 ( 84) TTACGTTA 1 chr3L:16423162-16423282 ( 53) TTACGTTA 1 chr3L:12193659-12193779 ( 108) TTACGTTA 1 chr2R:21234696-21234816 ( 45) TTACGTTA 1 chrX:15292924-15293044 ( 32) TTACGTTA 1 chr3L:13223800-13223920 ( 53) TTACGTTA 1 chr2R:15921350-15921470 ( 14) ATACGTTA 1 chr2L:17715989-17716109 ( 92) TTACGTTA 1 chr3L:1756246-1756366 ( 92) CAACGTAA 1 chr3R:17718945-17719065 ( 96) CAACGTAA 1 chr2L:12201535-12201655 ( 104) CAACGTAA 1 chr2L:8619783-8619903 ( 110) ATACGTAT 1 chr2L:3171156-3171276 ( 84) ATACGTAT 1 chr3R:27700281-27700401 ( 34) ATACGTAT 1 chr3R:9543616-9543736 ( 63) ATACGTAT 1 chr2L:35567-35687 ( 13) ATACGTAT 1 chrX:2296807-2296927 ( 95) TTACGTAT 1 chr2L:13332861-13332981 ( 34) TTACGTAT 1 chr2L:21086293-21086413 ( 111) TTACGTAT 1 chrX:9106584-9106704 ( 81) AGACGTAA 1 chr2R:16160193-16160313 ( 92) TGACGTAA 1 chr3L:17049458-17049578 ( 2) TAACGTTA 1 chr2R:10049368-10049488 ( 68) TAACGTTA 1 chr3R:24104624-24104744 ( 64) AAACGTTA 1 chr3L:13903885-13904005 ( 27) AGACGTAA 1 chr3R:30532765-30532885 ( 5) CTACGTTA 1 chr3L:9679086-9679206 ( 47) CTACGTTA 1 chr3L:1100813-1100933 ( 73) TAACGTAT 1 chr3R:4292232-4292352 ( 70) TCACGTAA 1 chr3L:18743917-18744037 ( 65) TCACGTAA 1 chr3R:9416887-9417007 ( 12) CTACGTAT 1 chrX:10730052-10730172 ( 3) TCACGTAA 1 chr2R:6760428-6760548 ( 61) ACACGTAA 1 chrX:1466961-1467081 ( 73) CGACGTAA 1 chr3R:19017537-19017657 ( 109) CGACGTAA 1 chr3R:15054533-15054653 ( 12) CGACGTAA 1 chr2L:8257539-8257659 ( 87) CGACGTAA 1 chr2R:21687630-21687750 ( 58) TTACGTTT 1 chr3R:22424929-22425049 ( 100) ATACGTTT 1 chr3R:5772515-5772635 ( 86) ATACGTTT 1 chr3L:16470143-16470263 ( 6) TTACGTTT 1 chr3R:31097355-31097475 ( 69) TTACGTTT 1 chr3L:16854825-16854945 ( 99) TTACGTTT 1 chr3L:9364284-9364404 ( 26) TTACGTTT 1 chrX:6584460-6584580 ( 92) TTACGTTT 1 chr3L:3810089-3810209 ( 86) TGACGTTA 1 chr2L:5195778-5195898 ( 100) TGACGTTA 1 chr3L:4092841-4092961 ( 40) CCACGTAA 1 chr3R:9417091-9417211 ( 36) TAACGTTT 1 chr2R:10026419-10026539 ( 3) AAACGTTT 1 chr4:359002-359122 ( 63) AAACGTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.69676 E= 1.6e-032 59 -45 -1337 49 12 -213 -130 92 176 -1337 -1337 -1337 -1337 227 -1337 -1337 -1337 -1337 226 -1337 -1337 -1337 -1337 179 130 -1337 -1337 -8 144 -1337 -1337 -54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 106 E= 1.6e-032 0.443396 0.150943 0.000000 0.405660 0.320755 0.047170 0.084906 0.547170 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.726415 0.000000 0.000000 0.273585 0.801887 0.000000 0.000000 0.198113 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWACGTAA MEME-2 regular expression -------------------------------------------------------------------------------- [AT][TA]ACGT[AT]A -------------------------------------------------------------------------------- Time 15.96 secs. ******************************************************************************** ******************************************************************************** MOTIF GCCGCCGA MEME-3 width = 8 sites = 9 llr = 97 E-value = 1.8e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::2a pos.-specific C :aa:8a1: probability G a::a2:7: matrix T :::::::: bits 2.3 **** * 2.0 **** * 1.8 **** * * 1.6 ****** * Relative 1.4 ****** * Entropy 1.1 ****** * (15.5 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GCCGCCGA consensus G A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:10877788-10877908 10 4.94e-06 GTGACCTTG GCCGCCGA ACAGCAAATG chrX:1380911-1381031 47 4.94e-06 CAGCAGCGTT GCCGCCGA AAGCAGAGtg chr2L:35567-35687 31 4.94e-06 AAACGGTGTT GCCGCCGA GTTGGGCGGA chr3L:13133944-13134064 7 4.94e-06 ACGGGC GCCGCCGA AACTTTACGT chr2R:9584583-9584703 26 9.94e-06 TTATCGATTT GCCGGCGA CTATCGCACC chr3R:19017537-19017657 46 9.94e-06 TTACGATTTG GCCGGCGA GTACGTCACC chr2L:5195999-5196119 34 1.69e-05 GCTGAAGGGT GCCGCCAA ACCGCTGATC chr3L:8787400-8787520 17 1.69e-05 ACTCGCGAGC GCCGCCAA TACATTCACA chr3L:22136607-22136727 11 2.18e-05 GAAACGCGAT GCCGCCCA CGTAATGTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:10877788-10877908 4.9e-06 9_[+3]_103 chrX:1380911-1381031 4.9e-06 46_[+3]_66 chr2L:35567-35687 4.9e-06 30_[+3]_82 chr3L:13133944-13134064 4.9e-06 6_[+3]_106 chr2R:9584583-9584703 9.9e-06 25_[+3]_87 chr3R:19017537-19017657 9.9e-06 45_[+3]_67 chr2L:5195999-5196119 1.7e-05 33_[+3]_79 chr3L:8787400-8787520 1.7e-05 16_[+3]_96 chr3L:22136607-22136727 2.2e-05 10_[+3]_102 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCGCCGA width=8 seqs=9 chrX:10877788-10877908 ( 10) GCCGCCGA 1 chrX:1380911-1381031 ( 47) GCCGCCGA 1 chr2L:35567-35687 ( 31) GCCGCCGA 1 chr3L:13133944-13134064 ( 7) GCCGCCGA 1 chr2R:9584583-9584703 ( 26) GCCGGCGA 1 chr3R:19017537-19017657 ( 46) GCCGGCGA 1 chr2L:5195999-5196119 ( 34) GCCGCCAA 1 chr3L:8787400-8787520 ( 17) GCCGCCAA 1 chr3L:22136607-22136727 ( 11) GCCGCCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.4638 E= 1.8e+004 -982 -982 225 -982 -982 227 -982 -982 -982 227 -982 -982 -982 -982 225 -982 -982 191 9 -982 -982 227 -982 -982 -41 -89 167 -982 176 -982 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 1.8e+004 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.777778 0.222222 0.000000 0.000000 1.000000 0.000000 0.000000 0.222222 0.111111 0.666667 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCGCCGA MEME-3 regular expression -------------------------------------------------------------------------------- GCCG[CG]C[GA]A -------------------------------------------------------------------------------- Time 21.79 secs. ******************************************************************************** ******************************************************************************** MOTIF GCRGCKGC MEME-4 width = 8 sites = 11 llr = 118 E-value = 1.8e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::4::::: pos.-specific C :a:1a::a probability G a:69:6a: matrix T :::::4:: bits 2.3 ** * ** 2.0 ** * ** 1.8 ** ** ** 1.6 ** ** ** Relative 1.4 ** ** ** Entropy 1.1 ******** (15.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GCGGCGGC consensus A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:16673030-16673150 60 3.54e-06 TGCGCCAAAA GCGGCGGC TGCGACGCCG chr2R:11252078-11252198 74 3.54e-06 TCCGGGAGCG GCGGCGGC GCGAACTGGT chr3L:20620403-20620523 47 3.54e-06 TTGATTTTTA GCGGCGGC CAAAACAACG chrX:2796442-2796562 100 1.34e-05 GATAGCGGAC GCAGCGGC GAAAGAGACG chr3L:8331573-8331693 112 1.34e-05 CGTTGTCCCT GCAGCGGC C chr3L:9426057-9426177 75 1.34e-05 GAGCCACAAG GCAGCGGC ACGAAAGCGG chr2R:7407372-7407492 60 1.34e-05 CAAAAAGTGA GCGGCTGC CAGCGGAACG chr3L:16854825-16854945 19 1.34e-05 TTCCCTCCCC GCGGCTGC CATCCCCTAC chrX:10730052-10730172 78 1.34e-05 ACATGTTGCA GCGGCTGC AGGTGCCAGA chr2R:11251878-11251998 108 2.03e-05 TCTCCAACGA GCAGCTGc tctct chr3R:15290446-15290566 81 2.38e-05 GCGTGATAAA GCGCCGGC TTTGTGTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:16673030-16673150 3.5e-06 59_[+4]_53 chr2R:11252078-11252198 3.5e-06 73_[+4]_39 chr3L:20620403-20620523 3.5e-06 46_[+4]_66 chrX:2796442-2796562 1.3e-05 99_[+4]_13 chr3L:8331573-8331693 1.3e-05 111_[+4]_1 chr3L:9426057-9426177 1.3e-05 74_[+4]_38 chr2R:7407372-7407492 1.3e-05 59_[+4]_53 chr3L:16854825-16854945 1.3e-05 18_[+4]_94 chrX:10730052-10730172 1.3e-05 77_[+4]_35 chr2R:11251878-11251998 2e-05 107_[+4]_5 chr3R:15290446-15290566 2.4e-05 80_[+4]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCRGCKGC width=8 seqs=11 chrX:16673030-16673150 ( 60) GCGGCGGC 1 chr2R:11252078-11252198 ( 74) GCGGCGGC 1 chr3L:20620403-20620523 ( 47) GCGGCGGC 1 chrX:2796442-2796562 ( 100) GCAGCGGC 1 chr3L:8331573-8331693 ( 112) GCAGCGGC 1 chr3L:9426057-9426177 ( 75) GCAGCGGC 1 chr2R:7407372-7407492 ( 60) GCGGCTGC 1 chr3L:16854825-16854945 ( 19) GCGGCTGC 1 chrX:10730052-10730172 ( 78) GCGGCTGC 1 chr2R:11251878-11251998 ( 108) GCAGCTGC 1 chr3R:15290446-15290566 ( 81) GCGCCGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.3527 E= 1.8e+002 -1010 -1010 225 -1010 -1010 227 -1010 -1010 30 -1010 160 -1010 -1010 -118 212 -1010 -1010 227 -1010 -1010 -1010 -1010 160 33 -1010 -1010 225 -1010 -1010 227 -1010 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 11 E= 1.8e+002 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.363636 0.000000 0.636364 0.000000 0.000000 0.090909 0.909091 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.636364 0.363636 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCRGCKGC MEME-4 regular expression -------------------------------------------------------------------------------- GC[GA]GC[GT]GC -------------------------------------------------------------------------------- Time 27.60 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCTGAT MEME-5 width = 8 sites = 7 llr = 78 E-value = 1.7e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::::a: pos.-specific C a::a:::: probability G ::a::a:: matrix T ::::a::a bits 2.3 * ** * 2.0 * ** * 1.8 ******** 1.6 ******** Relative 1.4 ******** Entropy 1.1 ******** (16.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CAGCTGAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:9679086-9679206 22 1.36e-05 AATTATAAAG CAGCTGAT TTTTGTTTTG chr3L:3810089-3810209 100 1.36e-05 GTTAAACAAG CAGCTGAT TGGGGATGGC chr2R:12692650-12692770 40 1.36e-05 AAACAAATCA CAGCTGAT GTGCGGAGGA chr3L:9424294-9424414 51 1.36e-05 GGATTTTGAG CAGCTGAT GGGGCAGTGA chr3R:29146877-29146997 74 1.36e-05 GGTTCGGGCA CAGCTGAT GTTGGTCTAT chr2L:20083113-20083233 32 1.36e-05 GGCCGTCGAA CAGCTGAT TTGACTACGT chr3L:9364284-9364404 63 1.36e-05 CGGAAAGAAA CAGCTGAT GCTGCCCAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:9679086-9679206 1.4e-05 21_[+5]_91 chr3L:3810089-3810209 1.4e-05 99_[+5]_13 chr2R:12692650-12692770 1.4e-05 39_[+5]_73 chr3L:9424294-9424414 1.4e-05 50_[+5]_62 chr3R:29146877-29146997 1.4e-05 73_[+5]_39 chr2L:20083113-20083233 1.4e-05 31_[+5]_81 chr3L:9364284-9364404 1.4e-05 62_[+5]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCTGAT width=8 seqs=7 chr3L:9679086-9679206 ( 22) CAGCTGAT 1 chr3L:3810089-3810209 ( 100) CAGCTGAT 1 chr2R:12692650-12692770 ( 40) CAGCTGAT 1 chr3L:9424294-9424414 ( 51) CAGCTGAT 1 chr3R:29146877-29146997 ( 74) CAGCTGAT 1 chr2L:20083113-20083233 ( 32) CAGCTGAT 1 chr3L:9364284-9364404 ( 63) CAGCTGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.9574 E= 1.7e+004 -945 227 -945 -945 176 -945 -945 -945 -945 -945 225 -945 -945 227 -945 -945 -945 -945 -945 179 -945 -945 225 -945 176 -945 -945 -945 -945 -945 -945 179 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 7 E= 1.7e+004 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGAT MEME-5 regular expression -------------------------------------------------------------------------------- CAGCTGAT -------------------------------------------------------------------------------- Time 33.43 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:18576399-18576519 4.75e-02 69_[+2(5.42e-05)]_43 chr2L:8257539-8257659 1.39e-02 120 chr2L:14520624-14520744 4.85e-03 31_[+1(9.15e-05)]_5_[+1(1.33e-05)]_\ 68 chr2R:11251878-11251998 1.15e-02 107_[+4(2.03e-05)]_5 chr2R:21509724-21509844 5.67e-02 89_[+2(5.42e-05)]_23 chr2L:19057931-19058051 1.56e-02 66_[+2(5.42e-05)]_46 chr2L:2724553-2724673 2.12e-01 16_[+1(5.92e-05)]_96 chr3R:15340506-15340626 4.51e-02 96_[+1(9.15e-05)]_16 chr3R:15147984-15148104 1.64e-02 120 chr2L:17715703-17715823 7.66e-01 120 chr2L:21086293-21086413 7.49e-03 95_[+1(2.69e-05)]_17 chrX:8060287-8060407 2.50e-03 120 chr2L:7473408-7473528 3.26e-01 120 chr3L:22470430-22470550 1.43e-03 75_[+1(1.33e-05)]_12_[+1(1.33e-05)]_\ 17 chr2R:23083569-23083689 1.03e-01 120 chr3L:8187470-8187590 1.20e-03 120 chr2R:6760428-6760548 2.57e-01 120 chrX:2244892-2245012 2.51e-02 49_[+1(2.69e-05)]_23_[+1(2.69e-05)]_\ 2_[+1(2.69e-05)]_22 chr2R:12981488-12981608 6.14e-04 77_[+1(2.69e-05)]_35 chr3L:9129886-9130006 2.72e-03 80_[+1(1.33e-05)]_32 chrX:10807212-10807332 9.89e-01 120 chr2L:8355558-8355678 3.02e-03 65_[+1(1.33e-05)]_47 chr2R:17484676-17484796 1.90e-02 70_[+2(5.42e-05)]_42 chr2L:17715989-17716109 2.47e-02 64_[+1(4.04e-05)]_48 chr2R:16660693-16660813 4.88e-03 43_[+1(1.33e-05)]_33_[+1(2.69e-05)]_\ 15_[+2(5.42e-05)]_5 chr2L:13332861-13332981 1.13e-01 120 chr2R:6760631-6760751 5.48e-01 120 chr2L:8257745-8257865 6.21e-01 120 chrX:2214184-2214304 1.18e-02 [+2(5.42e-05)]_112 chr2L:12201535-12201655 2.01e-02 52_[+1(5.92e-05)]_12_[+1(2.69e-05)]_\ 40 chr3L:22136607-22136727 1.85e-03 10_[+3(2.18e-05)]_102 chr3L:7808135-7808255 1.00e-01 120 chr2L:18732407-18732527 2.58e-03 42_[+1(1.33e-05)]_70 chr2L:5195778-5195898 6.08e-03 120 chr2R:9503427-9503547 7.93e-03 51_[+2(5.42e-05)]_61 chr3R:15148184-15148304 8.92e-01 120 chr2L:16715573-16715693 4.03e-02 19_[+2(5.42e-05)]_93 chr3R:9543906-9544026 5.36e-01 120 chrX:6584460-6584580 1.64e-02 64_[+1(1.33e-05)]_7_[+1(9.15e-05)]_\ 2_[+1(9.15e-05)]_23 chr3L:13133944-13134064 3.88e-06 6_[+3(4.94e-06)]_4_[+2(5.42e-05)]_\ 34_[+3(5.25e-05)]_52 chr2L:4614137-4614257 7.27e-02 120 chr2L:3357368-3357488 2.10e-01 83_[+2(5.42e-05)]_29 chr3L:9364284-9364404 7.25e-06 3_[+1(1.33e-05)]_51_[+5(1.36e-05)]_\ 50 chr2L:20083113-20083233 4.05e-05 22_[+3(6.64e-05)]_1_[+5(1.36e-05)]_\ 81 chr2R:11389054-11389174 1.85e-01 120 chr2R:15921350-15921470 6.21e-03 35_[+1(1.33e-05)]_77 chr3L:1100813-1100933 1.37e-02 81_[+1(1.33e-05)]_31 chr3L:20620403-20620523 7.06e-05 46_[+4(3.54e-06)]_66 chr2R:15921565-15921685 1.83e-01 120 chr3L:9130088-9130208 9.28e-01 120 chrX:2296807-2296927 1.34e-02 120 chrX:10730052-10730172 3.38e-05 29_[+1(2.69e-05)]_37_[+4(1.34e-05)]_\ 38 chr3R:17718945-17719065 4.12e-01 120 chr3L:19235479-19235599 1.93e-03 83_[+1(2.69e-05)]_29 chr3L:13223800-13223920 2.10e-02 67_[+1(1.33e-05)]_12_[+1(9.15e-05)]_\ 25 chr3L:22136407-22136527 1.65e-02 120 chr2R:11252078-11252198 1.89e-03 70_[+4(3.54e-06)]_42 chr3R:29146877-29146997 4.98e-03 73_[+5(1.36e-05)]_39 chr3L:16854825-16854945 3.24e-05 18_[+4(1.34e-05)]_43_[+1(9.15e-05)]_\ 43 chr3L:9112026-9112146 3.39e-02 120 chr3L:16100205-16100325 8.63e-03 65_[+1(9.15e-05)]_47 chr2R:7407372-7407492 3.05e-04 35_[+2(5.42e-05)]_16_[+4(1.34e-05)]_\ 53 chr2L:19058135-19058255 6.58e-01 120 chr3R:18731412-18731532 1.06e-01 120 chr3L:12843548-12843668 5.22e-01 120 chrX:7074665-7074785 8.30e-01 120 chrX:2245109-2245229 8.66e-01 120 chr2R:9504638-9504758 5.02e-02 52_[+1(1.33e-05)]_60 chr3L:17951440-17951560 1.33e-03 10_[+1(1.33e-05)]_102 chr2R:6196123-6196243 8.83e-01 120 chr2L:19565347-19565467 9.99e-02 120 chr2L:35567-35687 2.95e-03 30_[+3(4.94e-06)]_82 chr2R:4133309-4133429 4.14e-04 22_[+1(1.33e-05)]_90 chrX:15292924-15293044 3.42e-01 120 chrX:2214433-2214553 8.18e-01 120 chr3L:9424294-9424414 2.34e-05 31_[+2(5.42e-05)]_11_[+5(1.36e-05)]_\ 17_[+2(5.42e-05)]_37 chr3L:13904086-13904206 9.49e-01 120 chr2R:21509925-21510045 9.68e-01 120 chr3R:31097355-31097475 7.80e-02 120 chr3L:19235740-19235860 9.49e-01 120 chr3R:5268658-5268778 1.27e-01 120 chrX:5418358-5418478 4.88e-01 120 chr3L:13903885-13904005 4.96e-01 120 chr3R:19847445-19847565 7.20e-01 120 chr3R:19044784-19044904 1.31e-01 120 chr2L:8931306-8931426 5.11e-03 16_[+2(5.42e-05)]_96 chr3L:19237830-19237950 9.36e-01 120 chr3L:16470143-16470263 4.45e-02 22_[+1(5.92e-05)]_90 chr3R:5772515-5772635 1.68e-01 120 chr2R:21234696-21234816 1.77e-03 47_[+1(1.33e-05)]_65 chr3R:12650664-12650784 9.24e-01 120 chr3R:14655960-14656080 3.14e-02 120 chr3R:10791608-10791728 6.71e-03 81_[+2(5.42e-05)]_3_[+1(9.15e-05)]_\ 20 chr3L:1756246-1756366 1.68e-01 120 chrX:1968327-1968447 8.26e-02 12_[+2(5.42e-05)]_16_[+2(5.42e-05)]_\ 76 chr2R:24744440-24744560 4.36e-03 74_[+1(1.33e-05)]_38 chr3L:5980271-5980391 1.96e-01 120 chr3L:8787400-8787520 8.02e-06 16_[+3(1.69e-05)]_70_[+1(1.33e-05)]_\ 18 chr3L:18304734-18304854 3.53e-02 120 chr2L:21154313-21154433 9.20e-01 120 chrX:3482260-3482380 5.87e-02 120 chr3R:26137400-26137520 5.45e-02 120 chr3L:9426057-9426177 4.69e-04 74_[+4(1.34e-05)]_38 chr2L:2744968-2745088 8.56e-01 120 chrX:9164746-9164866 1.77e-02 45_[+1(2.69e-05)]_67 chr2L:5195999-5196119 7.73e-03 33_[+3(1.69e-05)]_79 chr3L:12193659-12193779 2.15e-02 95_[+1(1.33e-05)]_17 chr2R:25076310-25076430 9.36e-01 120 chrX:3377486-3377606 4.31e-02 120 chr2L:7452235-7452355 2.06e-04 109_[+1(1.33e-05)]_3 chr4:359002-359122 1.47e-01 120 chr3R:15417894-15418014 8.28e-04 120 chr3L:9363922-9364042 7.03e-03 120 chr2R:10026419-10026539 1.90e-01 120 chr3L:12843748-12843868 6.04e-01 120 chr3L:16378237-16378357 4.95e-03 106_[+1(1.33e-05)]_6 chr3R:17880610-17880730 3.37e-04 42_[+4(3.36e-05)]_53_[+1(4.04e-05)]_\ 9 chrX:1467166-1467286 3.09e-02 120 chr2R:16320653-16320773 7.40e-02 120 chr2R:17484876-17484996 1.48e-01 120 chr2L:22190475-22190595 2.36e-03 43_[+1(1.33e-05)]_10_[+1(4.04e-05)]_\ 51 chr2L:13484229-13484349 4.56e-03 51_[+1(1.33e-05)]_61 chr3R:24357896-24358016 1.37e-01 120 chr3R:9416887-9417007 4.75e-02 120 chrX:10730298-10730418 9.88e-01 120 chr3L:10985764-10985884 1.52e-02 22_[+1(4.04e-05)]_90 chr3L:21202983-21203103 1.53e-02 4_[+2(5.42e-05)]_71_[+1(4.04e-05)]_\ 29 chr2L:6873579-6873699 1.04e-01 86_[+2(5.42e-05)]_6_[+2(5.42e-05)]_\ 12 chr3R:15054533-15054653 6.64e-05 26_[+1(2.69e-05)]_86 chr3L:4440108-4440228 5.05e-01 120 chrX:5087853-5087973 4.25e-01 120 chr3R:16200634-16200754 7.68e-01 120 chr3L:16423162-16423282 1.12e-02 55_[+1(1.33e-05)]_9_[+1(1.33e-05)]_\ 40 chr2R:6042531-6042651 1.39e-01 120 chrX:7066707-7066827 1.37e-01 120 chr2L:15760715-15760835 1.10e-01 33_[+1(5.92e-05)]_79 chr3R:22726622-22726742 6.79e-01 120 chr3L:16193100-16193220 6.31e-04 45_[+2(5.42e-05)]_53_[+3(6.64e-05)]_\ 6 chr3L:16855033-16855153 9.98e-01 120 chr2L:16703155-16703275 2.25e-02 120 chr3L:379040-379160 1.31e-03 54_[+2(5.42e-05)]_1_[+1(2.69e-05)]_\ 49 chr3R:26853648-26853768 9.19e-03 51_[+1(1.33e-05)]_7_[+1(1.33e-05)]_\ 46 chr3R:15290446-15290566 8.02e-04 38_[+1(5.92e-05)]_34_[+4(2.38e-05)]_\ 32 chr3L:18949288-18949408 4.50e-03 86_[+1(4.04e-05)]_26 chr3R:13645541-13645661 8.43e-02 80_[+2(5.42e-05)]_32 chr3R:24104624-24104744 2.91e-02 7_[+2(5.42e-05)]_105 chr3R:20328345-20328465 8.53e-01 120 chr2L:7886049-7886169 1.92e-01 38_[+1(9.15e-05)]_74 chr3L:8331573-8331693 1.38e-05 3_[+2(5.42e-05)]_13_[+1(5.92e-05)]_\ 79_[+4(1.34e-05)]_1 chr2L:16859110-16859230 1.72e-03 60_[+1(1.33e-05)]_52 chr2R:10049368-10049488 6.54e-04 76_[+1(2.69e-05)]_36 chr2R:24891563-24891683 1.37e-02 120 chr3R:11626625-11626745 3.75e-01 120 chr2R:13235879-13235999 3.28e-03 120 chrX:11868866-11868986 2.43e-01 120 chrX:1084466-1084586 3.14e-02 120 chr2R:15680325-15680445 8.93e-01 120 chr2L:19565554-19565674 9.85e-01 120 chr3L:4092841-4092961 6.70e-03 9_[+1(2.69e-05)]_103 chrX:428299-428419 1.55e-01 100_[+2(5.42e-05)]_12 chrX:16557215-16557335 1.98e-04 45_[+1(4.04e-05)]_67 chr3L:7781700-7781820 5.94e-02 120 chr3L:1101015-1101135 5.16e-01 120 chr3R:21203336-21203456 4.63e-02 120 chr3R:9543616-9543736 3.48e-02 120 chrX:16673030-16673150 1.82e-05 59_[+4(3.54e-06)]_53 chr3L:8787620-8787740 2.54e-01 120 chr3R:21203539-21203659 7.03e-01 120 chr2R:12692650-12692770 1.33e-03 39_[+5(1.36e-05)]_73 chr3L:1756469-1756589 4.03e-01 120 chr2L:6000136-6000256 8.45e-02 120 chr3R:19017537-19017657 4.12e-03 45_[+3(9.94e-06)]_67 chr3L:627521-627641 9.69e-01 120 chr2L:182714-182834 1.78e-02 21_[+1(4.04e-05)]_9_[+1(1.33e-05)]_\ 74 chrX:2383289-2383409 4.93e-02 120 chr2L:4998127-4998247 6.29e-01 120 chr3L:20524580-20524700 5.08e-02 73_[+1(5.92e-05)]_39 chr3L:1549651-1549771 3.69e-01 120 chr3L:3810089-3810209 6.97e-05 99_[+5(1.36e-05)]_13 chrX:1380911-1381031 1.92e-03 46_[+3(4.94e-06)]_66 chr2R:15680117-15680237 2.19e-01 120 chr3R:22424929-22425049 2.94e-02 120 chr2L:6921794-6921914 5.78e-01 120 chr4:358729-358849 4.73e-01 120 chr3L:17049458-17049578 9.06e-03 120 chr2L:4442347-4442467 2.04e-01 120 chrX:9164949-9165069 1.92e-01 120 chr2L:12201735-12201855 7.02e-01 120 chr2L:18732625-18732745 7.58e-01 120 chr3R:7186819-7186939 6.00e-02 120 chr2R:21687630-21687750 1.31e-02 67_[+1(1.33e-05)]_45 chr3R:27700281-27700401 2.47e-03 67_[+1(1.33e-05)]_45 chr3R:22726419-22726539 7.05e-01 120 chr3L:3810358-3810478 8.16e-01 120 chrX:6301279-6301399 7.57e-03 49_[+1(1.33e-05)]_24_[+1(1.33e-05)]_\ 31 chrX:5916763-5916883 8.72e-03 120 chr3L:9679086-9679206 1.12e-05 21_[+5(1.36e-05)]_53_[+1(1.33e-05)]_\ 4_[+1(5.92e-05)]_18 chr3R:30532765-30532885 3.69e-04 106_[+1(1.33e-05)]_6 chr2L:7966546-7966666 6.46e-04 41_[+1(1.33e-05)]_71 chr3R:11500153-11500273 6.34e-02 120 chr2L:3402576-3402696 4.13e-02 120 chr2R:19475951-19476071 4.51e-02 120 chr3R:17067926-17068046 2.81e-03 52_[+2(5.42e-05)]_60 chrX:10807002-10807122 1.96e-02 23_[+1(4.04e-05)]_89 chr2L:3171355-3171475 9.50e-02 120 chr3R:9545944-9546064 2.16e-01 120 chr2R:16160193-16160313 4.35e-02 120 chr2R:9456759-9456879 1.37e-02 76_[+1(1.33e-05)]_36 chr3L:17069060-17069180 7.71e-03 36_[+1(2.69e-05)]_2_[+1(2.69e-05)]_\ 66 chr2L:7820566-7820686 3.57e-02 27_[+1(1.33e-05)]_85 chr3L:23714887-23715007 2.96e-01 106_[+2(5.42e-05)]_6 chr2L:10246392-10246512 1.32e-01 120 chr3L:18440135-18440255 2.69e-03 51_[+1(5.92e-05)]_12_[+1(1.33e-05)]_\ 41 chr2L:21154016-21154136 5.09e-03 120 chr2L:19735624-19735744 2.11e-01 120 chr3L:16595260-16595380 3.52e-01 120 chr2L:8355759-8355879 9.90e-01 120 chrX:22455163-22455283 1.05e-01 120 chrX:19898056-19898176 2.11e-01 120 chr2L:3145655-3145775 7.19e-02 120 chr3R:18170201-18170321 1.46e-02 56_[+1(2.69e-05)]_56 chr2R:20236201-20236321 9.30e-03 52_[+1(5.92e-05)]_60 chr3L:18743917-18744037 1.53e-01 120 chr3R:4445265-4445385 3.08e-02 120 chr3R:26537266-26537386 2.72e-02 120 chrX:9106584-9106704 2.25e-01 120 chr3L:10985979-10986099 2.75e-02 120 chr3L:5823902-5824022 6.52e-02 120 chr3R:5592319-5592439 3.32e-01 120 chr3L:203931-204051 5.56e-01 120 chr3R:4292232-4292352 1.95e-02 72_[+1(2.69e-05)]_40 chr3R:16873107-16873227 8.34e-01 120 chr2L:3171156-3171276 6.63e-02 14_[+1(9.15e-05)]_98 chr3L:6496515-6496635 5.71e-01 120 chrX:17579471-17579591 6.92e-01 120 chr2R:22937257-22937377 3.29e-02 78_[+2(5.42e-05)]_34 chr2L:14588977-14589097 1.99e-01 120 chr2R:10819600-10819720 9.85e-01 120 chr2L:8619783-8619903 6.15e-01 120 chrX:10877788-10877908 1.76e-04 9_[+3(4.94e-06)]_82_[+2(5.42e-05)]_\ 13 chr2R:25076510-25076630 8.05e-01 120 chr3L:203721-203841 1.11e-01 120 chrX:2796442-2796562 3.94e-05 99_[+4(1.34e-05)]_13 chr2L:16715925-16716045 7.90e-01 120 chr3R:9417091-9417211 1.49e-01 120 chr3R:30180036-30180156 2.43e-02 108_[+1(2.69e-05)]_4 chrX:1466961-1467081 1.06e-01 120 chr2R:13554343-13554463 1.25e-01 120 chr3L:327740-327860 2.24e-01 120 chr2R:9584583-9584703 1.45e-03 25_[+3(9.94e-06)]_87 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n06.farnam.hpc.yale.internal ********************************************************************************