******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG8388.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr4:226890-227010 1.0000 120 chr3L:21285057-21285177 1.0000 120 chr2L:20998927-20999047 1.0000 120 chrX:17503707-17503827 1.0000 120 chr2L:11423962-11424082 1.0000 120 chr2L:19440425-19440545 1.0000 120 chr2R:24082201-24082321 1.0000 120 chr3R:19024900-19025020 1.0000 120 chr3L:4501545-4501665 1.0000 120 chr3L:21284200-21284320 1.0000 120 chr2L:7580150-7580270 1.0000 120 chrX:16004928-16005048 1.0000 120 chr2L:19229993-19230113 1.0000 120 chr2R:8053121-8053241 1.0000 120 chr3L:16055268-16055388 1.0000 120 chr2L:7332917-7333037 1.0000 120 chr2L:19218052-19218172 1.0000 120 chr2R:10441423-10441543 1.0000 120 chr2R:6197452-6197572 1.0000 120 chrX:4555732-4555852 1.0000 120 chr3L:5573219-5573339 1.0000 120 chrX:16774636-16774756 1.0000 120 chr2L:18330420-18330540 1.0000 120 chr2L:12252794-12252914 1.0000 120 chr4:1054532-1054652 1.0000 120 chr3R:17395549-17395669 1.0000 120 chrX:17353849-17353969 1.0000 120 chr2L:6816520-6816640 1.0000 120 chr2R:21602899-21603019 1.0000 120 chrX:16774836-16774956 1.0000 120 chr2R:14138131-14138251 1.0000 120 chr3R:8724071-8724191 1.0000 120 chr3L:3316580-3316700 1.0000 120 chr3L:15694556-15694676 1.0000 120 chr3R:15409990-15410110 1.0000 120 chr2L:2144638-2144758 1.0000 120 chr3L:25121323-25121443 1.0000 120 chr3R:21189631-21189751 1.0000 120 chr3R:11958061-11958181 1.0000 120 chr3L:23555450-23555570 1.0000 120 chr2R:10868998-10869118 1.0000 120 chr3R:15688569-15688689 1.0000 120 chr3L:15291259-15291379 1.0000 120 chr3L:10249939-10250059 1.0000 120 chr3R:14279475-14279595 1.0000 120 chrX:16458694-16458814 1.0000 120 chr3L:2765154-2765274 1.0000 120 chr3R:19319589-19319709 1.0000 120 chr2R:23726466-23726586 1.0000 120 chr2L:10260510-10260630 1.0000 120 chr3L:21465833-21465953 1.0000 120 chr2L:22139901-22140021 1.0000 120 chr3R:6460897-6461017 1.0000 120 chr3L:13210379-13210499 1.0000 120 chr2L:5484071-5484191 1.0000 120 chr2L:15506915-15507035 1.0000 120 chr3L:21465630-21465750 1.0000 120 chr2L:1562869-1562989 1.0000 120 chr2L:11473135-11473255 1.0000 120 chr3L:18748092-18748212 1.0000 120 chrX:20466645-20466765 1.0000 120 chr3R:22163538-22163658 1.0000 120 chr3L:10373450-10373570 1.0000 120 chr3L:17630847-17630967 1.0000 120 chr3R:7093736-7093856 1.0000 120 chr3L:14184438-14184558 1.0000 120 chr3R:12998368-12998488 1.0000 120 chr4:1056446-1056566 1.0000 120 chr2R:11754720-11754840 1.0000 120 chr2L:9684123-9684243 1.0000 120 chr2R:21195948-21196068 1.0000 120 chr2L:5786815-5786935 1.0000 120 chr3L:8576588-8576708 1.0000 120 chr3L:1166058-1166178 1.0000 120 chr3L:19240540-19240660 1.0000 120 chrX:1903722-1903842 1.0000 120 chr3R:9049350-9049470 1.0000 120 chr2R:13789212-13789332 1.0000 120 chr2L:6205053-6205173 1.0000 120 chr3R:5271006-5271126 1.0000 120 chr2R:11656143-11656263 1.0000 120 chr4:1063552-1063672 1.0000 120 chr3L:22154391-22154511 1.0000 120 chrX:16062881-16063001 1.0000 120 chr3R:9130351-9130471 1.0000 120 chr3L:15030457-15030577 1.0000 120 chr3R:13699459-13699579 1.0000 120 chrX:390680-390800 1.0000 120 chrX:1773587-1773707 1.0000 120 chr2L:12700672-12700792 1.0000 120 chr3R:4684909-4685029 1.0000 120 chrX:8684581-8684701 1.0000 120 chr4:56877-56997 1.0000 120 chr3R:17947435-17947555 1.0000 120 chrX:7616415-7616535 1.0000 120 chr2L:12341814-12341934 1.0000 120 chr3R:18244238-18244358 1.0000 120 chr2L:16501449-16501569 1.0000 120 chr3L:14291315-14291435 1.0000 120 chr2L:21873809-21873929 1.0000 120 chr3R:11640346-11640466 1.0000 120 chr2L:4821922-4822042 1.0000 120 chr3R:19875700-19875820 1.0000 120 chr2L:5186655-5186775 1.0000 120 chr3L:14303382-14303502 1.0000 120 chr3L:12590111-12590231 1.0000 120 chr3L:469844-469964 1.0000 120 chr2L:10341448-10341568 1.0000 120 chr3R:6482067-6482187 1.0000 120 chr4:976728-976848 1.0000 120 chr2R:8650238-8650358 1.0000 120 chr2R:23869590-23869710 1.0000 120 chr3R:14477621-14477741 1.0000 120 chr3L:19704384-19704504 1.0000 120 chr3R:14744543-14744663 1.0000 120 chr3R:24520908-24521028 1.0000 120 chr3R:24659312-24659432 1.0000 120 chrX:17519558-17519678 1.0000 120 chr2L:16457346-16457466 1.0000 120 chr3R:6658676-6658796 1.0000 120 chr2L:13584540-13584660 1.0000 120 chrX:7591051-7591171 1.0000 120 chr3L:1145183-1145303 1.0000 120 chrX:13222300-13222420 1.0000 120 chr2L:19373193-19373313 1.0000 120 chr2R:5421073-5421193 1.0000 120 chr2L:14011744-14011864 1.0000 120 chr3R:19093434-19093554 1.0000 120 chr2L:22924654-22924774 1.0000 120 chr2R:6611051-6611171 1.0000 120 chr3R:23384958-23385078 1.0000 120 chrX:12547728-12547848 1.0000 120 chr3R:12995585-12995705 1.0000 120 chr3L:21497523-21497643 1.0000 120 chr3L:2433974-2434094 1.0000 120 chr3L:6314567-6314687 1.0000 120 chr2R:18585271-18585391 1.0000 120 chr3L:24537718-24537838 1.0000 120 chr2R:6665934-6666054 1.0000 120 chrX:2905235-2905355 1.0000 120 chrX:18881193-18881313 1.0000 120 chr3R:10081612-10081732 1.0000 120 chr3L:17402538-17402658 1.0000 120 chr3R:24521423-24521543 1.0000 120 chr3L:13488470-13488590 1.0000 120 chr2R:5993190-5993310 1.0000 120 chr2L:10590804-10590924 1.0000 120 chr2R:8759656-8759776 1.0000 120 chr3L:17404685-17404805 1.0000 120 chrX:4485919-4486039 1.0000 120 chrX:6706661-6706781 1.0000 120 chr2R:2846274-2846394 1.0000 120 chr2L:23313603-23313723 1.0000 120 chrX:5964206-5964326 1.0000 120 chr3L:15329428-15329548 1.0000 120 chr2L:8736543-8736663 1.0000 120 chr3R:4998629-4998749 1.0000 120 chr3L:19338405-19338525 1.0000 120 chr2R:14438334-14438454 1.0000 120 chr3R:31683900-31684020 1.0000 120 chr2R:23977864-23977984 1.0000 120 chr2L:5092223-5092343 1.0000 120 chr2L:14159579-14159699 1.0000 120 chr2L:7516169-7516289 1.0000 120 chrX:2125828-2125948 1.0000 120 chrX:19606974-19607094 1.0000 120 chr3L:5575681-5575801 1.0000 120 chr2L:5224876-5224996 1.0000 120 chr3R:11193871-11193991 1.0000 120 chrX:19667625-19667745 1.0000 120 chr3L:20585784-20585904 1.0000 120 chr3R:26892921-26893041 1.0000 120 chr3R:10709440-10709560 1.0000 120 chr3L:20949708-20949828 1.0000 120 chr4:421177-421297 1.0000 120 chr3L:15229871-15229991 1.0000 120 chr2R:6163162-6163282 1.0000 120 chr2R:14073622-14073742 1.0000 120 chr2R:10103179-10103299 1.0000 120 chr2R:21886409-21886529 1.0000 120 chrX:17110674-17110794 1.0000 120 chr2L:5782014-5782134 1.0000 120 chr3L:1742274-1742394 1.0000 120 chr2L:11482775-11482895 1.0000 120 chr2R:5126423-5126543 1.0000 120 chr3R:29372615-29372735 1.0000 120 chr3L:18139173-18139293 1.0000 120 chr2L:6749598-6749718 1.0000 120 chr3L:22680996-22681116 1.0000 120 chrX:14923811-14923931 1.0000 120 chr2L:10940764-10940884 1.0000 120 chr3L:23081362-23081482 1.0000 120 chr3R:21606893-21607013 1.0000 120 chr2L:5300424-5300544 1.0000 120 chr3L:27262779-27262899 1.0000 120 chr3L:506962-507082 1.0000 120 chr2L:3823979-3824099 1.0000 120 chr3L:11554912-11555032 1.0000 120 chr3R:29621186-29621306 1.0000 120 chr3R:17880357-17880477 1.0000 120 chr3L:13946800-13946920 1.0000 120 chr2L:10339610-10339730 1.0000 120 chr2L:4886875-4886995 1.0000 120 chr3L:490419-490539 1.0000 120 chr3L:1406211-1406331 1.0000 120 chr2R:13438367-13438487 1.0000 120 chr3R:16319679-16319799 1.0000 120 chr2L:21077971-21078091 1.0000 120 chr3L:17408181-17408301 1.0000 120 chr3L:1367191-1367311 1.0000 120 chr3R:3790423-3790543 1.0000 120 chr3L:329320-329440 1.0000 120 chr2R:13561097-13561217 1.0000 120 chr3L:21274110-21274230 1.0000 120 chr2R:5496138-5496258 1.0000 120 chrX:17726015-17726135 1.0000 120 chr3R:6760999-6761119 1.0000 120 chrX:10899280-10899400 1.0000 120 chr3R:4518501-4518621 1.0000 120 chrX:15077105-15077225 1.0000 120 chr2R:14267621-14267741 1.0000 120 chr3R:23220739-23220859 1.0000 120 chr3L:4429006-4429126 1.0000 120 chrX:7202552-7202672 1.0000 120 chr2L:10428666-10428786 1.0000 120 chr3R:15139663-15139783 1.0000 120 chrX:19306796-19306916 1.0000 120 chr3L:631951-632071 1.0000 120 chr3L:7868999-7869119 1.0000 120 chr2R:13846226-13846346 1.0000 120 chr3L:23097187-23097307 1.0000 120 chr3L:18748291-18748411 1.0000 120 chr2L:7559484-7559604 1.0000 120 chr2L:18390116-18390236 1.0000 120 chr2R:13611599-13611719 1.0000 120 chr2L:3570755-3570875 1.0000 120 chr3L:27279966-27280086 1.0000 120 chrX:13237548-13237668 1.0000 120 chr2R:9711537-9711657 1.0000 120 chr3R:4831813-4831933 1.0000 120 chr2L:23313804-23313924 1.0000 120 chr2R:10783037-10783157 1.0000 120 chr3L:22495222-22495342 1.0000 120 chr4:1063754-1063874 1.0000 120 chr3L:818870-818990 1.0000 120 chrX:16965122-16965242 1.0000 120 chr3L:4708212-4708332 1.0000 120 chr3L:14160986-14161106 1.0000 120 chr2L:4791537-4791657 1.0000 120 chrX:21281610-21281730 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG8388/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG8388.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.298 C 0.202 G 0.205 T 0.295 Background letter frequencies (from file dataset with add-one prior applied): A 0.298 C 0.202 G 0.205 T 0.295 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CACWGTGN MEME-1 width = 8 sites = 212 llr = 1448 E-value = 3.0e-122 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2a:6::12 pos.-specific C 6:a:1:13 probability G 1:::9:62 matrix T 2::4:a22 bits 2.3 * 2.1 * * 1.8 ** ** 1.6 ** ** Relative 1.4 ** ** Entropy 1.2 ** ** (9.9 bits) 0.9 ** ** 0.7 ****** 0.5 ******* 0.2 ******* 0.0 -------- Multilevel CACAGTGC consensus T G sequence T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:818870-818990 24 9.07e-06 AACACTCGGG CACAGTGC CGCCCGAAAG chr2L:4886875-4886995 26 9.07e-06 GAGCTGCCAA CACAGTGC TGTATAAAAT chr3R:17880357-17880477 39 9.07e-06 CACACCGACG CACAGTGC GTGCGAAAAG chr2L:3823979-3824099 62 9.07e-06 ATATCAAACG CACAGTGC CGCCGACAAG chr3R:4998629-4998749 42 9.07e-06 ATTTCGGTTG CACAGTGC CTGCCATTTA chr3R:6482067-6482187 24 9.07e-06 GTCTAGCCGG CACAGTGC CGATCAATAG chr3L:469844-469964 29 9.07e-06 GAGACACGAG CACAGTGC TGCCGAAAAG chr2L:5186655-5186775 19 9.07e-06 CCCCACACGA CACAGTGC CGCACAAAAG chr2L:21873809-21873929 5 9.07e-06 CATC CACAGTGC TTGCGGCAAA chr2L:16501449-16501569 19 9.07e-06 CAGCAGCAGG CACAGTGC ATGCAACAAA chr3L:21465630-21465750 3 9.07e-06 GG CACAGTGC CTGCCCAAAG chr3R:15409990-15410110 37 9.07e-06 CGCATTCGGA CACAGTGC GGCGCATAAG chr2R:6197452-6197572 88 9.07e-06 TGAACTATCT CACAGTGC GATAATACAT chr2L:10428666-10428786 76 1.81e-05 AAACTTGAAG CACTGTGC CGTTATCAAA chr2R:14267621-14267741 75 1.81e-05 TTGCAGCACT CACTGTGC ACTTTTCCAA chr3R:6760999-6761119 60 1.81e-05 TGCTAGATAC CACTGTGC GGAACTGGGC chr3L:1367191-1367311 32 1.81e-05 TTGTTGTACC CACTGTGC AGATGCATCT chrX:14923811-14923931 108 1.81e-05 TTTTGTGGGT CACTGTGC GTGTG chr2R:10103179-10103299 94 1.81e-05 TTGAGTGCGT CACTGTGC GGAGAACACA chr2R:5993190-5993310 40 1.81e-05 CCACTAGATG CACTGTGC GGCGCATGCG chr2L:16457346-16457466 66 1.81e-05 TTTTATTACG CACTGTGC GCAATAACTC chr3L:14303382-14303502 67 1.81e-05 TTTTGGTAAC CACTGTGC GTGGGATATG chr3R:11640346-11640466 65 1.81e-05 TTTTGCAATG CACTGTGC ACTGTGTTGT chrX:8684581-8684701 71 1.81e-05 TTTTAGCAGG CACTGTGC GTCTGGAGTA chr2L:1562869-1562989 92 1.81e-05 TTTTGGCCAG CACTGTGC TGGGTGGTTC chr3L:2765154-2765274 88 1.81e-05 TTTTGACAGA CACTGTGC GGTGACAACG chrX:16458694-16458814 32 1.81e-05 TTTGCGACGC CACTGTGC GAAGTGTGCA chrX:4555732-4555852 78 1.81e-05 TTTTTGCAGT CACTGTGC ACAGTGGACA chr2R:10441423-10441543 68 1.81e-05 TTCACCACAG CACTGTGC CTCTCGAGTG chr3L:16055268-16055388 103 1.81e-05 ATCTTGCGCT CACTGTGC GCGCTCTGCT chr2R:8053121-8053241 101 1.81e-05 TTACGAGCAG CACTGTGC GAATATTCAA chr2L:20998927-20999047 87 1.81e-05 TTTTCAGCAG CACTGTGC GAAGAGTTTC chr2L:4791537-4791657 22 2.73e-05 GATGAGGGCG CACAGTGG CGGTCGAAAG chr3L:4708212-4708332 24 2.73e-05 CACTCTGCCG CACAGTGG GAGCAAAAAG chr2L:11482775-11482895 52 2.73e-05 CTTAGCGGCA CACAGTGG GTACCAGAAT chrX:19606974-19607094 57 2.73e-05 AAGGGAAACT CACAGTGG CGGCATAAGT chr3L:17404685-17404805 26 2.73e-05 GCTTTCTATG CACAGTGG CTGCGCAAAG chr3R:6658676-6658796 39 2.73e-05 GTGCATGGAA CACAGTGG CTAGTAAAAG chr3L:12590111-12590231 32 2.73e-05 ACGCACAACA CACAGTGG GCTTCAAAAG chr3R:18244238-18244358 34 2.73e-05 GGCGACGCTG CACAGTGG CTGTAAAAAG chrX:16774636-16774756 14 2.73e-05 GAATTAAGTC CACAGTGG CGCAGAAAAG chr3L:4429006-4429126 78 3.64e-05 TTTTCACAAT CACTGTGG TGGAAACTTT chr3R:4518501-4518621 61 3.64e-05 actgtttaca cactgtGG TTTTCGttct chr3L:15229871-15229991 83 3.64e-05 AATTGGACCT CACTGTGG ATGGATGTTG chr3L:631951-632071 24 4.96e-05 CTATATCTGC CACAGTGT CTGCCATAAT chr2R:5126423-5126543 46 4.96e-05 caacttattt cacagtgt gtaaacagtt chr4:421177-421297 25 4.96e-05 caacttattt cacagtgt gtaaacagtt chr3R:10081612-10081732 14 4.96e-05 TTCATTTCCC CACAGTGT CAGCGATAGA chr3R:14477621-14477741 66 4.96e-05 ACTGGGAATT CACAGTGT GCACTATAAG chr4:976728-976848 33 4.96e-05 caacctattt cacagtgt gtaaaaagtt chr3L:14184438-14184558 43 4.96e-05 CTGAATGTGT CACAGTGT GGCCAGAAAG chr4:226890-227010 66 4.96e-05 caacttattt cacagtgt gcaaacagtt chr3L:506962-507082 39 6.30e-05 AAAACTCGCC CACAGTGA CTGTGAAAAG chrX:2125828-2125948 49 6.30e-05 GTATTTTGCG CACAGTGA AATTAAGTCA chr3L:17402538-17402658 34 6.30e-05 TTTGTGTTCG CACAGTGA GCGGCAAAAG chrX:13222300-13222420 40 6.30e-05 GAAACCCGGT CACAGTGA CGTTCAAAAA chrX:17519558-17519678 35 6.30e-05 ATTGATCGAC CACAGTGA TCTCGAAAAG chr2R:11754720-11754840 54 6.30e-05 GACAGTTCCG CACAGTGA GCGCCGGAAT chr2L:10940764-10940884 67 7.61e-05 TTTTTGCACT CACTGTGT GCGCTTGCTT chr3R:24521423-24521543 66 7.61e-05 TTTTGAGCGG CACTGTGT GCTCTCTGCT chr3L:22154391-22154511 82 7.61e-05 TTGCAGCAGA CACTGTGT ACTTTGGGGT chr3L:10373450-10373570 90 7.61e-05 TTTTGGCAGG CACTGTGT CGTCAGCACC chrX:20466645-20466765 93 7.61e-05 CTATTTCCCC CACTGTGT GATCTCTCTC chr2L:15506915-15507035 94 7.61e-05 TTTTGATAGT CACTGTGT GGCTGAAGGG chr3L:27279966-27280086 79 8.94e-05 actgtttaca cactgtga aataagttga chr3R:14744543-14744663 113 8.94e-05 TTTCCAGACC CACTGTGA chr4:1063552-1063672 76 8.94e-05 actgtttaca cactgtga aataagttga chr2L:6205053-6205173 66 8.94e-05 TTTCATCAGG CACTGTGA GTGCGCGAAC chr4:1054532-1054652 65 8.94e-05 agtgtttaga cactgtga aaaaagttaa chrX:17503707-17503827 92 8.94e-05 TTTTGCAGCC CACTGTGA CCAAGTTTCG chr2R:10783037-10783157 83 1.29e-04 ATTTGCTTAT AACAGTGC CTTTCAAAAG chr3R:29621186-29621306 24 1.29e-04 TAGTTCAATA AACAGTGC TGCCATAAAG chr2L:6749598-6749718 55 1.29e-04 AAATTATGAA AACAGTGC CGTGGGCGGC chr3L:1742274-1742394 33 1.29e-04 CTTATCAGTG AACAGTGC CTAACAAAGG chr2R:14073622-14073742 60 1.29e-04 GGTAAGCGTA AACAGTGC CAGCAAAAAG chr3R:11193871-11193991 46 1.29e-04 GCCCACTGTC TACAGTGC CGGCCGTCAG chr2L:5092223-5092343 36 1.29e-04 CTATCATCAT TACAGTGC GGCCGATAAG chr3R:31683900-31684020 60 1.29e-04 AGCCAAAAGC AACAGTGC ATCGTAAAAA chrX:4485919-4486039 16 1.29e-04 GCGGCTGGCA AACAGTGC GTGTCATAAT chrX:2905235-2905355 65 1.29e-04 GGGGCAGGCA AACAGTGC GTGCGAAAAA chr3L:6314567-6314687 20 1.29e-04 GGGCGGCGGC AACAGTGC CTCAAAAAAA chr3R:17947435-17947555 43 1.29e-04 AAATTTCAAT TACAGTGC AGCTGAAAAG chr3L:10249939-10250059 41 1.29e-04 ATGCAACGGG AACAGTGC CTCTGAGAAG chr2L:18330420-18330540 43 1.29e-04 CACGGGCGTT TACAGTGC CGACAAAAAG chr3L:5573219-5573339 44 1.29e-04 ACACACCGCA TACAGTGC CTGTCGAAAG chr3L:490419-490539 68 1.42e-04 TGTTTGTTCT CACTGTTC GAGTGAGTTT chr2R:6611051-6611171 66 1.42e-04 TGCTGGCTGT CACTGTTC GCTGTTCGCG chr3L:14291315-14291435 53 1.42e-04 TTTTGGCTGG CACTGTTC ACGCTCAAGT chr2L:19229993-19230113 82 1.42e-04 TTTTTGCACT CACTGTTC GCGTTTTTGG chr2L:11423962-11424082 89 1.42e-04 TTCTACACAG CACTGTTC GAGCTCGAGC chr2L:21077971-21078091 77 1.82e-04 TTTTGGCGTG AACTGTGC TGGCCGACCT chr2L:10339610-10339730 71 1.82e-04 CAAGTGCATG CACAGTTG CGGGCAAAAG chr2L:23313603-23313723 52 1.82e-04 CTCCATTTAA AACTGTGC GTCAAGATAG chr2R:8759656-8759776 101 1.82e-04 TATTTTTTAA AACTGTGC TTAGTCAAGT chr2L:4821922-4822042 54 1.82e-04 CCAGTCCAGG CACAGTTG ATGCAAAAAG chr3L:13210379-13210499 40 1.82e-04 CGTAACTTGC CACAGTTG CCACCAAAAG chr2L:12252794-12252914 63 1.82e-04 TTTTCGACGC TACTGTGC CGCGTTGACA chr2L:7559484-7559604 42 2.09e-04 GAGCACACCA AACAGTGG CTGCCAAAAG chr3L:18139173-18139293 19 2.09e-04 GCGAATACGG TACAGTGG GTGCTGTAAA chr3L:24537718-24537838 35 2.09e-04 TACAGTGAAA TACAGTGG GTCAGAAATT chr2L:13584540-13584660 41 2.09e-04 CTGTTTTCAG TACAGTGG GCGCAAAAAG chr2R:23869590-23869710 22 2.09e-04 GAGAGACAGT TACAGTGG GTGAACAAAG chr3R:19875700-19875820 26 2.09e-04 CTGCCAGATG TACAGTGG CGCGCAAAAG chr2L:12700672-12700792 22 2.09e-04 CCAAAGCGGC TACAGTGG TGGCCAGCAG chr2L:5484071-5484191 37 2.09e-04 ACACAATGGC TACAGTGG GTCCAAAAAG chr2R:24082201-24082321 46 2.09e-04 ATTAGTTACA TACAGTGG GTGCGAAAAC chrX:16965122-16965242 75 2.35e-04 TTATGGCACC CACTGTTG TACTGAAAAT chr2L:5782014-5782134 62 2.35e-04 TTATTTGCGG CACTGTTG TGCTCAATTG chr3R:24659312-24659432 21 2.35e-04 GTTTTGCGCT CACTGTTG ATTCTGCCCC chr3R:9130351-9130471 57 2.35e-04 TTTTAGCAGA CACTGTTG ACTGCGCACT chr2L:9684123-9684243 89 2.35e-04 TTGTAGGTGC CACTGTTG AAATGGGTTA chr3L:18748092-18748212 52 2.35e-04 ATTTAGCTGG CACTGTTG ATCCTCGTGC chr3L:5575681-5575801 112 3.52e-04 TTTTTGCTTT CACTGTAC C chr2L:14159579-14159699 42 3.52e-04 TTCAACGTAC TACAGTGT CTACTAAAAG chr2R:6665934-6666054 4 3.52e-04 ttt tacagtgt gtaaacagtt chr3R:12995585-12995705 88 3.52e-04 ATTTAGCGTA AACAGTGT AAATAGCAAT chr2L:2144638-2144758 76 3.52e-04 TGACGACAGC CACTGTAC TGCGAGTGCG chrX:16004928-16005048 81 3.52e-04 AGCTGTGAGC CACTGTAC ATATGTACAT chrX:19306796-19306916 74 4.33e-04 TTTTGGTAGC CACTGTTT GCCACGGTTT chr3L:17408181-17408301 14 4.33e-04 TAGAAGGAAT AACAGTGA GTAGAAACAG chr2R:13438367-13438487 43 4.33e-04 tttctacgca tacagtga cagccaacaa chr2L:5300424-5300544 59 4.33e-04 TGTTTGTGGC CACTGTTT CGGTTTCTTC chr3R:21606893-21607013 46 4.33e-04 CGCAATGTGG TACAGTGA CTACCAAAAA chr3L:20949708-20949828 21 4.33e-04 TAGCTTGTGC CACAGTAG CTGCCGAAGG chr2L:5224876-5224996 97 4.33e-04 TTTTGCTACC CACTGTTT ATGGCTCGAA chr2L:8736543-8736663 86 4.33e-04 TGGGTTAATG AACAGTGA GGCCTCATTA chr2L:10590804-10590924 78 4.33e-04 TTTTGGCTGC CACTGTTT GGGATTTATG chr2L:19373193-19373313 86 4.33e-04 TTTTTATGCC CACTGTTT CGGGCCAATA chr3L:19704384-19704504 79 4.33e-04 TTATGGCACT CACTGTTT GGGCATGTTA chrX:7616415-7616535 68 4.33e-04 TCTGCGACCA AACAGTGA CAAACAATGC chrX:16062881-16063001 32 4.33e-04 AAGATTCAAC TACAGTGA GTGCAAATCC chr3L:1166058-1166178 25 4.33e-04 AATAGACTCG TACAGTGA CACCAAAAAG chr3L:8576588-8576708 35 4.33e-04 TGAAGCTCCC AACAGTGA CTACCAAAAG chr3R:12998368-12998488 42 4.33e-04 cgcgcgcgca tacaGTGA GCGAGTGAAA chr3R:19319589-19319709 33 4.33e-04 TATATACGGA AACAGTGA CAGCGAAAAG chr2R:10868998-10869118 43 4.33e-04 CTGGGTCTGT AACAGTGA CTGCGAGAAG chr3R:21189631-21189751 39 4.33e-04 AATACACAGA AACAGTGA GTGAGAAAAG chr2R:14138131-14138251 14 4.33e-04 GCAAACAGTT AACAGTGA GAGCTGCAAG chr2L:6816520-6816640 57 4.33e-04 ATGATCATCT AACAGTGA CTGCAAATAG chr3L:4501545-4501665 52 4.33e-04 TTAACAGAAG TACAGTGA GTGTAAAAGT chr2R:13846226-13846346 75 4.99e-04 TATCTTGAGG CACTGTTA GGCTGTTCAG chr2L:7516169-7516289 88 4.99e-04 TGCTGGCAGG CACTGTTA AAAGGAGATA chrX:390680-390800 51 4.99e-04 GCATTGACCA GACAGTGC CTAAAGTTTT chr3R:9049350-9049470 34 4.99e-04 AAAAGTTTTG AACTGTGT GCATATAAAT chr3R:29372615-29372735 52 5.60e-04 TAATCACAGG CACTGTCC GAGGTAGAAA chr2R:8650238-8650358 93 5.60e-04 GAACGGCAGG CACTGTAG AAAGACCGAT chr3R:22163538-22163658 81 5.60e-04 TTACGCTACG CACTGTAG CTCTTTAGTC chr3L:14160986-14161106 46 5.98e-04 TTTTGACGGT GACTGTGC TGCAGACCCA chrX:13237548-13237668 69 5.98e-04 TTTTATGGGT GACTGTGC GATATACGCC chr3L:1406211-1406331 15 5.98e-04 ATTGGGCGCA CACAGTCG CCGACAAAAG chr3L:22680996-22681116 65 5.98e-04 TATTTGCTGT GACTGTGC CTCATCCCCT chr3R:23384958-23385078 13 5.98e-04 ATCACAGTAT CACAGTAT CCGACGAAAG chr4:56877-56997 88 5.98e-04 ATATTTGCGA CACAGTAT TTTTGCACTC chr2L:18390116-18390236 41 6.36e-04 gccacgcaca cacacTGC TAGCAAAATG chr3R:16319679-16319799 40 6.36e-04 AACACACACA CACACTGC CAGCAAAAAG chr2L:7580150-7580270 34 6.36e-04 GGGGGATGAA GACAGTGG CGTCGAAAAG chrX:19667625-19667745 89 6.64e-04 TTGCCGCGAT CACTGTCG CGCCAGGTGG chr2R:23977864-23977984 65 6.64e-04 TTATACCTGA CACTGTAT GAAAATGCAA chr3L:15694556-15694676 85 6.64e-04 AAATTGGTGG CACTGTAT GGGTCTTAAT chr3L:21284200-21284320 79 6.64e-04 AAACAGTAGT CACTGTAT TCAGGATGGT chr3R:19024900-19025020 14 6.64e-04 TATTTATATT CACTGTAT TACTTTCTAT chrX:17726015-17726135 62 7.52e-04 TTTTGTTAGG CACTGTAA CAAGGGAATT chr3L:21497523-21497643 55 7.52e-04 CCTGTAGAGC TACAGTTC GTTGAAATTG chr2L:14011744-14011864 40 7.52e-04 GTAAAGCTTG CACAGTCT GTTCAAAAAG chr3R:5271006-5271126 19 7.52e-04 AACTACTCAA CACTGTAA TGGGCAAGCG chrX:17353849-17353969 85 7.52e-04 TTTTGGTAGG CACTGTAA CGCAATGGAT chr3L:20585784-20585904 23 7.88e-04 CATCAATCCA CACAGTCA GCGCCAAAAG chr3L:2433974-2434094 33 7.88e-04 TTTACATGCA CACAGTCA CTGCCAAAAG chr2R:21195948-21196068 39 7.88e-04 GTAGCCGCAC CACACTGG GTGGCAAAAG chr3R:6460897-6461017 65 7.88e-04 aaactgttta cacactgg gaaataagtt chr3R:14279475-14279595 25 7.88e-04 ATCACTCACA CACACTGG CTCACAAAAG chr2R:14438334-14438454 73 8.53e-04 TTTTAGCAGA CACTGTCT GCGTAAAATG chr3R:4831813-4831933 65 9.27e-04 CTGGTGTACA tacagttg cggtaacaat chr2R:13611599-13611719 19 9.27e-04 TGTGTGAAAG TACAGTTG TGTGCGCCAG chr3L:7868999-7869119 30 9.27e-04 GGCGGTAACA TACAGTTG GTCTTCCAGT chr3R:4684909-4685029 52 9.27e-04 CGCTGCGCCT CACTCTGG CTTCCAACAG chr3R:13699459-13699579 69 9.27e-04 TATTTTGGCT CACTGTCA GCAGTCAGCT chr2L:5786815-5786935 79 9.27e-04 TTTTCGAACT CACTGTCA TTGGCAAGTA chr2L:11473135-11473255 90 9.27e-04 TTATCGGGGT GACTGTGT CCATGAATCA chr2R:23726466-23726586 34 9.27e-04 CTCGCACGTT AACAGTTG GCGCGGAAAG chrX:17110674-17110794 21 1.04e-03 GATGGATACT CACACTGA CTTCCACCAG chr2R:21886409-21886529 54 1.04e-03 TCGTAAAACC CACACTGA CTCCTAAAAA chrX:1773587-1773707 57 1.04e-03 TGTTAACAGC TACTGTTG GCAGATATCC chr3L:17630847-17630967 54 1.04e-03 TATGCGGTGG CACACTGA CTACCAAAAG chr3R:3790423-3790543 97 1.11e-03 gcctaccata tacagttt gtcaagaaac chr3L:27262779-27262899 42 1.11e-03 ATAATACACA TAcagttt gtcaataaat chr2L:22924654-22924774 63 1.11e-03 tcagcttgta aacagttt cttgacaaac chr2R:5421073-5421193 56 1.11e-03 TACAGCTATA TAcagttt gtcaagaaac chr3R:11958061-11958181 55 1.11e-03 acggtgtgta aacagttt cttgacaaac chr3R:17395549-17395669 42 1.11e-03 CCCTGCCGCA TACAGTTT GTTTGAAAAA chrX:6706661-6706781 69 1.22e-03 TTTTCTGTGG AACTGTAC AATAGCTAAA chr2R:11656143-11656263 35 1.22e-03 ATAACCACGG TACAGTTA GTGGAAAAAA chrX:7591051-7591171 21 1.35e-03 AGACAAAAAG TACAGTCC GGGCCAAAAA chr3R:24520908-24521028 29 1.35e-03 AGATCATCCG TACAGTAG GTACCATAAG chr2L:10260510-10260630 27 1.35e-03 CTGATTTGGC AACTGTTT TTTGTTTTAT chr2L:22139901-22140021 88 1.49e-03 TGAAATTGAA AACTGTAG AAAGCAGTTA chr2L:19440425-19440545 91 1.49e-03 TTTTTCGAGC AACTGTAG CCACGCGCCT chr3L:21285057-21285177 87 1.49e-03 ATTTTGCAGT GACTGTTC GATATATAGG chr3R:7093736-7093856 19 1.60e-03 AGTATGTGAT TACAGTAT TCACGAATAG chr3R:8724071-8724191 35 1.60e-03 TTTTTCTTTG TACAGTAT CTGCAATATG chr3L:11554912-11555032 101 1.80e-03 TTATGGCAGC GACTGTTG CCGTCGGACA chr3L:23081362-23081482 54 1.80e-03 tttcttgaca aactgTAT GTGATGAAGg chr2R:2846274-2846394 51 1.80e-03 ttacgcccac tactgTat gtaattaata chr2R:13561097-13561217 19 1.96e-03 ATTGAAATGC GACAGTTT CACATGTGTT chrX:5964206-5964326 101 1.96e-03 GCTCTAGTAT AACTGTAA AATGAAAAGA chr3L:13488470-13488590 39 1.96e-03 CCCCCAGTCA GACAGTTT CTTCCGAAAT chr3R:15688569-15688689 87 1.96e-03 TTTTCAGAGA AACTGTAA TGTTAACTAA chr3R:10709440-10709560 19 2.05e-03 TGCCATTTGA AACACTGG GAACGATAAG chrX:1903722-1903842 18 2.05e-03 TACAGCCAAC AACAGTCA TCGCAAATAG chr4:1063754-1063874 50 2.26e-03 tccaagttta cacacttt tgagactgtc chr2L:3570755-3570875 71 2.26e-03 TTATGGCTGC AACTGTCA ATGTCAAATG chr2L:10341448-10341568 83 2.26e-03 TTTTTAAATA GACTGTTA ATATAAAATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:818870-818990 9.1e-06 23_[+1]_89 chr2L:4886875-4886995 9.1e-06 25_[+1]_87 chr3R:17880357-17880477 9.1e-06 38_[+1]_74 chr2L:3823979-3824099 9.1e-06 61_[+1]_51 chr3R:4998629-4998749 9.1e-06 41_[+1]_71 chr3R:6482067-6482187 9.1e-06 23_[+1]_89 chr3L:469844-469964 9.1e-06 28_[+1]_84 chr2L:5186655-5186775 9.1e-06 18_[+1]_94 chr2L:21873809-21873929 9.1e-06 4_[+1]_108 chr2L:16501449-16501569 9.1e-06 18_[+1]_94 chr3L:21465630-21465750 9.1e-06 2_[+1]_110 chr3R:15409990-15410110 9.1e-06 36_[+1]_76 chr2R:6197452-6197572 9.1e-06 87_[+1]_25 chr2L:10428666-10428786 1.8e-05 75_[+1]_37 chr2R:14267621-14267741 1.8e-05 74_[+1]_38 chr3R:6760999-6761119 1.8e-05 59_[+1]_53 chr3L:1367191-1367311 1.8e-05 31_[+1]_81 chrX:14923811-14923931 1.8e-05 107_[+1]_5 chr2R:10103179-10103299 1.8e-05 93_[+1]_19 chr2R:5993190-5993310 1.8e-05 39_[+1]_73 chr2L:16457346-16457466 1.8e-05 65_[+1]_47 chr3L:14303382-14303502 1.8e-05 66_[+1]_46 chr3R:11640346-11640466 1.8e-05 64_[+1]_48 chrX:8684581-8684701 1.8e-05 70_[+1]_42 chr2L:1562869-1562989 1.8e-05 91_[+1]_21 chr3L:2765154-2765274 1.8e-05 87_[+1]_25 chrX:16458694-16458814 1.8e-05 31_[+1]_81 chrX:4555732-4555852 1.8e-05 77_[+1]_35 chr2R:10441423-10441543 1.8e-05 67_[+1]_45 chr3L:16055268-16055388 1.8e-05 102_[+1]_10 chr2R:8053121-8053241 1.8e-05 100_[+1]_12 chr2L:20998927-20999047 1.8e-05 86_[+1]_26 chr2L:4791537-4791657 2.7e-05 21_[+1]_91 chr3L:4708212-4708332 2.7e-05 23_[+1]_89 chr2L:11482775-11482895 2.7e-05 51_[+1]_61 chrX:19606974-19607094 2.7e-05 56_[+1]_56 chr3L:17404685-17404805 2.7e-05 25_[+1]_87 chr3R:6658676-6658796 2.7e-05 38_[+1]_74 chr3L:12590111-12590231 2.7e-05 31_[+1]_81 chr3R:18244238-18244358 2.7e-05 33_[+1]_79 chrX:16774636-16774756 2.7e-05 13_[+1]_99 chr3L:4429006-4429126 3.6e-05 77_[+1]_35 chr3R:4518501-4518621 3.6e-05 60_[+1]_52 chr3L:15229871-15229991 3.6e-05 82_[+1]_30 chr3L:631951-632071 5e-05 23_[+1]_89 chr2R:5126423-5126543 5e-05 45_[+1]_67 chr4:421177-421297 5e-05 24_[+1]_88 chr3R:10081612-10081732 5e-05 13_[+1]_99 chr3R:14477621-14477741 5e-05 65_[+1]_47 chr4:976728-976848 5e-05 32_[+1]_80 chr3L:14184438-14184558 5e-05 42_[+1]_70 chr4:226890-227010 5e-05 65_[+1]_47 chr3L:506962-507082 6.3e-05 38_[+1]_74 chrX:2125828-2125948 6.3e-05 48_[+1]_64 chr3L:17402538-17402658 6.3e-05 33_[+1]_79 chrX:13222300-13222420 6.3e-05 39_[+1]_73 chrX:17519558-17519678 6.3e-05 34_[+1]_78 chr2R:11754720-11754840 6.3e-05 53_[+1]_59 chr2L:10940764-10940884 7.6e-05 66_[+1]_46 chr3R:24521423-24521543 7.6e-05 65_[+1]_47 chr3L:22154391-22154511 7.6e-05 81_[+1]_31 chr3L:10373450-10373570 7.6e-05 89_[+1]_23 chrX:20466645-20466765 7.6e-05 92_[+1]_20 chr2L:15506915-15507035 7.6e-05 93_[+1]_19 chr3L:27279966-27280086 8.9e-05 78_[+1]_34 chr3R:14744543-14744663 8.9e-05 112_[+1] chr4:1063552-1063672 8.9e-05 75_[+1]_37 chr2L:6205053-6205173 8.9e-05 65_[+1]_47 chr4:1054532-1054652 8.9e-05 64_[+1]_48 chrX:17503707-17503827 8.9e-05 91_[+1]_21 chr2R:10783037-10783157 0.00013 82_[+1]_30 chr3R:29621186-29621306 0.00013 23_[+1]_89 chr2L:6749598-6749718 0.00013 54_[+1]_58 chr3L:1742274-1742394 0.00013 32_[+1]_80 chr2R:14073622-14073742 0.00013 59_[+1]_53 chr3R:11193871-11193991 0.00013 45_[+1]_67 chr2L:5092223-5092343 0.00013 35_[+1]_77 chr3R:31683900-31684020 0.00013 59_[+1]_53 chrX:4485919-4486039 0.00013 15_[+1]_97 chrX:2905235-2905355 0.00013 64_[+1]_48 chr3L:6314567-6314687 0.00013 19_[+1]_93 chr3R:17947435-17947555 0.00013 42_[+1]_70 chr3L:10249939-10250059 0.00013 40_[+1]_72 chr2L:18330420-18330540 0.00013 42_[+1]_70 chr3L:5573219-5573339 0.00013 43_[+1]_69 chr3L:490419-490539 0.00014 67_[+1]_45 chr2R:6611051-6611171 0.00014 65_[+1]_47 chr3L:14291315-14291435 0.00014 52_[+1]_60 chr2L:19229993-19230113 0.00014 81_[+1]_31 chr2L:11423962-11424082 0.00014 88_[+1]_24 chr2L:21077971-21078091 0.00018 76_[+1]_36 chr2L:10339610-10339730 0.00018 70_[+1]_42 chr2L:23313603-23313723 0.00018 51_[+1]_61 chr2R:8759656-8759776 0.00018 100_[+1]_12 chr2L:4821922-4822042 0.00018 53_[+1]_59 chr3L:13210379-13210499 0.00018 39_[+1]_73 chr2L:12252794-12252914 0.00018 62_[+1]_50 chr2L:7559484-7559604 0.00021 41_[+1]_71 chr3L:18139173-18139293 0.00021 18_[+1]_94 chr3L:24537718-24537838 0.00021 34_[+1]_78 chr2L:13584540-13584660 0.00021 40_[+1]_72 chr2R:23869590-23869710 0.00021 21_[+1]_91 chr3R:19875700-19875820 0.00021 25_[+1]_87 chr2L:12700672-12700792 0.00021 21_[+1]_91 chr2L:5484071-5484191 0.00021 36_[+1]_76 chr2R:24082201-24082321 0.00021 45_[+1]_67 chrX:16965122-16965242 0.00023 74_[+1]_38 chr2L:5782014-5782134 0.00023 61_[+1]_51 chr3R:24659312-24659432 0.00023 20_[+1]_92 chr3R:9130351-9130471 0.00023 56_[+1]_56 chr2L:9684123-9684243 0.00023 88_[+1]_24 chr3L:18748092-18748212 0.00023 51_[+1]_61 chr3L:5575681-5575801 0.00035 111_[+1]_1 chr2L:14159579-14159699 0.00035 41_[+1]_71 chr2R:6665934-6666054 0.00035 3_[+1]_109 chr3R:12995585-12995705 0.00035 87_[+1]_25 chr2L:2144638-2144758 0.00035 75_[+1]_37 chrX:16004928-16005048 0.00035 80_[+1]_32 chrX:19306796-19306916 0.00043 73_[+1]_39 chr3L:17408181-17408301 0.00043 13_[+1]_99 chr2R:13438367-13438487 0.00043 42_[+1]_70 chr2L:5300424-5300544 0.00043 58_[+1]_54 chr3R:21606893-21607013 0.00043 45_[+1]_67 chr3L:20949708-20949828 0.00043 20_[+1]_92 chr2L:5224876-5224996 0.00043 96_[+1]_16 chr2L:8736543-8736663 0.00043 85_[+1]_27 chr2L:10590804-10590924 0.00043 77_[+1]_35 chr2L:19373193-19373313 0.00043 85_[+1]_27 chr3L:19704384-19704504 0.00043 78_[+1]_34 chrX:7616415-7616535 0.00043 67_[+1]_45 chrX:16062881-16063001 0.00043 31_[+1]_81 chr3L:1166058-1166178 0.00043 24_[+1]_88 chr3L:8576588-8576708 0.00043 34_[+1]_78 chr3R:12998368-12998488 0.00043 41_[+1]_71 chr3R:19319589-19319709 0.00043 32_[+1]_80 chr2R:10868998-10869118 0.00043 42_[+1]_70 chr3R:21189631-21189751 0.00043 38_[+1]_74 chr2R:14138131-14138251 0.00043 13_[+1]_99 chr2L:6816520-6816640 0.00043 56_[+1]_56 chr3L:4501545-4501665 0.00043 51_[+1]_61 chr2R:13846226-13846346 0.0005 74_[+1]_38 chr2L:7516169-7516289 0.0005 87_[+1]_25 chrX:390680-390800 0.0005 50_[+1]_62 chr3R:9049350-9049470 0.0005 33_[+1]_79 chr3R:29372615-29372735 0.00056 51_[+1]_61 chr2R:8650238-8650358 0.00056 92_[+1]_20 chr3R:22163538-22163658 0.00056 80_[+1]_32 chr3L:14160986-14161106 0.0006 45_[+1]_67 chrX:13237548-13237668 0.0006 68_[+1]_44 chr3L:1406211-1406331 0.0006 14_[+1]_98 chr3L:22680996-22681116 0.0006 64_[+1]_48 chr3R:23384958-23385078 0.0006 12_[+1]_100 chr4:56877-56997 0.0006 87_[+1]_25 chr2L:18390116-18390236 0.00064 40_[+1]_72 chr3R:16319679-16319799 0.00064 39_[+1]_73 chr2L:7580150-7580270 0.00064 33_[+1]_79 chrX:19667625-19667745 0.00066 88_[+1]_24 chr2R:23977864-23977984 0.00066 64_[+1]_48 chr3L:15694556-15694676 0.00066 84_[+1]_28 chr3L:21284200-21284320 0.00066 78_[+1]_34 chr3R:19024900-19025020 0.00066 13_[+1]_99 chrX:17726015-17726135 0.00075 61_[+1]_51 chr3L:21497523-21497643 0.00075 54_[+1]_58 chr2L:14011744-14011864 0.00075 39_[+1]_73 chr3R:5271006-5271126 0.00075 18_[+1]_94 chrX:17353849-17353969 0.00075 84_[+1]_28 chr3L:20585784-20585904 0.00079 22_[+1]_90 chr3L:2433974-2434094 0.00079 32_[+1]_80 chr2R:21195948-21196068 0.00079 38_[+1]_74 chr3R:6460897-6461017 0.00079 64_[+1]_48 chr3R:14279475-14279595 0.00079 24_[+1]_88 chr2R:14438334-14438454 0.00085 72_[+1]_40 chr3R:4831813-4831933 0.00093 64_[+1]_48 chr2R:13611599-13611719 0.00093 18_[+1]_94 chr3L:7868999-7869119 0.00093 29_[+1]_83 chr3R:4684909-4685029 0.00093 51_[+1]_61 chr3R:13699459-13699579 0.00093 68_[+1]_44 chr2L:5786815-5786935 0.00093 78_[+1]_34 chr2L:11473135-11473255 0.00093 89_[+1]_23 chr2R:23726466-23726586 0.00093 33_[+1]_79 chrX:17110674-17110794 0.001 20_[+1]_92 chr2R:21886409-21886529 0.001 53_[+1]_59 chrX:1773587-1773707 0.001 56_[+1]_56 chr3L:17630847-17630967 0.001 53_[+1]_59 chr3R:3790423-3790543 0.0011 96_[+1]_16 chr3L:27262779-27262899 0.0011 41_[+1]_71 chr2L:22924654-22924774 0.0011 62_[+1]_50 chr2R:5421073-5421193 0.0011 55_[+1]_57 chr3R:11958061-11958181 0.0011 54_[+1]_58 chr3R:17395549-17395669 0.0011 41_[+1]_71 chrX:6706661-6706781 0.0012 68_[+1]_44 chr2R:11656143-11656263 0.0012 34_[+1]_78 chrX:7591051-7591171 0.0014 20_[+1]_92 chr3R:24520908-24521028 0.0014 28_[+1]_84 chr2L:10260510-10260630 0.0014 26_[+1]_86 chr2L:22139901-22140021 0.0015 87_[+1]_25 chr2L:19440425-19440545 0.0015 90_[+1]_22 chr3L:21285057-21285177 0.0015 86_[+1]_26 chr3R:7093736-7093856 0.0016 18_[+1]_94 chr3R:8724071-8724191 0.0016 34_[+1]_78 chr3L:11554912-11555032 0.0018 100_[+1]_12 chr3L:23081362-23081482 0.0018 53_[+1]_59 chr2R:2846274-2846394 0.0018 50_[+1]_62 chr2R:13561097-13561217 0.002 18_[+1]_94 chrX:5964206-5964326 0.002 100_[+1]_12 chr3L:13488470-13488590 0.002 38_[+1]_74 chr3R:15688569-15688689 0.002 86_[+1]_26 chr3R:10709440-10709560 0.0021 18_[+1]_94 chrX:1903722-1903842 0.0021 17_[+1]_95 chr4:1063754-1063874 0.0023 49_[+1]_63 chr2L:3570755-3570875 0.0023 70_[+1]_42 chr2L:10341448-10341568 0.0023 82_[+1]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACWGTGN width=8 seqs=212 chr3L:818870-818990 ( 24) CACAGTGC 1 chr2L:4886875-4886995 ( 26) CACAGTGC 1 chr3R:17880357-17880477 ( 39) CACAGTGC 1 chr2L:3823979-3824099 ( 62) CACAGTGC 1 chr3R:4998629-4998749 ( 42) CACAGTGC 1 chr3R:6482067-6482187 ( 24) CACAGTGC 1 chr3L:469844-469964 ( 29) CACAGTGC 1 chr2L:5186655-5186775 ( 19) CACAGTGC 1 chr2L:21873809-21873929 ( 5) CACAGTGC 1 chr2L:16501449-16501569 ( 19) CACAGTGC 1 chr3L:21465630-21465750 ( 3) CACAGTGC 1 chr3R:15409990-15410110 ( 37) CACAGTGC 1 chr2R:6197452-6197572 ( 88) CACAGTGC 1 chr2L:10428666-10428786 ( 76) CACTGTGC 1 chr2R:14267621-14267741 ( 75) CACTGTGC 1 chr3R:6760999-6761119 ( 60) CACTGTGC 1 chr3L:1367191-1367311 ( 32) CACTGTGC 1 chrX:14923811-14923931 ( 108) CACTGTGC 1 chr2R:10103179-10103299 ( 94) CACTGTGC 1 chr2R:5993190-5993310 ( 40) CACTGTGC 1 chr2L:16457346-16457466 ( 66) CACTGTGC 1 chr3L:14303382-14303502 ( 67) CACTGTGC 1 chr3R:11640346-11640466 ( 65) CACTGTGC 1 chrX:8684581-8684701 ( 71) CACTGTGC 1 chr2L:1562869-1562989 ( 92) CACTGTGC 1 chr3L:2765154-2765274 ( 88) CACTGTGC 1 chrX:16458694-16458814 ( 32) CACTGTGC 1 chrX:4555732-4555852 ( 78) CACTGTGC 1 chr2R:10441423-10441543 ( 68) CACTGTGC 1 chr3L:16055268-16055388 ( 103) CACTGTGC 1 chr2R:8053121-8053241 ( 101) CACTGTGC 1 chr2L:20998927-20999047 ( 87) CACTGTGC 1 chr2L:4791537-4791657 ( 22) CACAGTGG 1 chr3L:4708212-4708332 ( 24) CACAGTGG 1 chr2L:11482775-11482895 ( 52) CACAGTGG 1 chrX:19606974-19607094 ( 57) CACAGTGG 1 chr3L:17404685-17404805 ( 26) CACAGTGG 1 chr3R:6658676-6658796 ( 39) CACAGTGG 1 chr3L:12590111-12590231 ( 32) CACAGTGG 1 chr3R:18244238-18244358 ( 34) CACAGTGG 1 chrX:16774636-16774756 ( 14) CACAGTGG 1 chr3L:4429006-4429126 ( 78) CACTGTGG 1 chr3R:4518501-4518621 ( 61) CACTGTGG 1 chr3L:15229871-15229991 ( 83) CACTGTGG 1 chr3L:631951-632071 ( 24) CACAGTGT 1 chr2R:5126423-5126543 ( 46) CACAGTGT 1 chr4:421177-421297 ( 25) CACAGTGT 1 chr3R:10081612-10081732 ( 14) CACAGTGT 1 chr3R:14477621-14477741 ( 66) CACAGTGT 1 chr4:976728-976848 ( 33) CACAGTGT 1 chr3L:14184438-14184558 ( 43) CACAGTGT 1 chr4:226890-227010 ( 66) CACAGTGT 1 chr3L:506962-507082 ( 39) CACAGTGA 1 chrX:2125828-2125948 ( 49) CACAGTGA 1 chr3L:17402538-17402658 ( 34) CACAGTGA 1 chrX:13222300-13222420 ( 40) CACAGTGA 1 chrX:17519558-17519678 ( 35) CACAGTGA 1 chr2R:11754720-11754840 ( 54) CACAGTGA 1 chr2L:10940764-10940884 ( 67) CACTGTGT 1 chr3R:24521423-24521543 ( 66) CACTGTGT 1 chr3L:22154391-22154511 ( 82) CACTGTGT 1 chr3L:10373450-10373570 ( 90) CACTGTGT 1 chrX:20466645-20466765 ( 93) CACTGTGT 1 chr2L:15506915-15507035 ( 94) CACTGTGT 1 chr3L:27279966-27280086 ( 79) CACTGTGA 1 chr3R:14744543-14744663 ( 113) CACTGTGA 1 chr4:1063552-1063672 ( 76) CACTGTGA 1 chr2L:6205053-6205173 ( 66) CACTGTGA 1 chr4:1054532-1054652 ( 65) CACTGTGA 1 chrX:17503707-17503827 ( 92) CACTGTGA 1 chr2R:10783037-10783157 ( 83) AACAGTGC 1 chr3R:29621186-29621306 ( 24) AACAGTGC 1 chr2L:6749598-6749718 ( 55) AACAGTGC 1 chr3L:1742274-1742394 ( 33) AACAGTGC 1 chr2R:14073622-14073742 ( 60) AACAGTGC 1 chr3R:11193871-11193991 ( 46) TACAGTGC 1 chr2L:5092223-5092343 ( 36) TACAGTGC 1 chr3R:31683900-31684020 ( 60) AACAGTGC 1 chrX:4485919-4486039 ( 16) AACAGTGC 1 chrX:2905235-2905355 ( 65) AACAGTGC 1 chr3L:6314567-6314687 ( 20) AACAGTGC 1 chr3R:17947435-17947555 ( 43) TACAGTGC 1 chr3L:10249939-10250059 ( 41) AACAGTGC 1 chr2L:18330420-18330540 ( 43) TACAGTGC 1 chr3L:5573219-5573339 ( 44) TACAGTGC 1 chr3L:490419-490539 ( 68) CACTGTTC 1 chr2R:6611051-6611171 ( 66) CACTGTTC 1 chr3L:14291315-14291435 ( 53) CACTGTTC 1 chr2L:19229993-19230113 ( 82) CACTGTTC 1 chr2L:11423962-11424082 ( 89) CACTGTTC 1 chr2L:21077971-21078091 ( 77) AACTGTGC 1 chr2L:10339610-10339730 ( 71) CACAGTTG 1 chr2L:23313603-23313723 ( 52) AACTGTGC 1 chr2R:8759656-8759776 ( 101) AACTGTGC 1 chr2L:4821922-4822042 ( 54) CACAGTTG 1 chr3L:13210379-13210499 ( 40) CACAGTTG 1 chr2L:12252794-12252914 ( 63) TACTGTGC 1 chr2L:7559484-7559604 ( 42) AACAGTGG 1 chr3L:18139173-18139293 ( 19) TACAGTGG 1 chr3L:24537718-24537838 ( 35) TACAGTGG 1 chr2L:13584540-13584660 ( 41) TACAGTGG 1 chr2R:23869590-23869710 ( 22) TACAGTGG 1 chr3R:19875700-19875820 ( 26) TACAGTGG 1 chr2L:12700672-12700792 ( 22) TACAGTGG 1 chr2L:5484071-5484191 ( 37) TACAGTGG 1 chr2R:24082201-24082321 ( 46) TACAGTGG 1 chrX:16965122-16965242 ( 75) CACTGTTG 1 chr2L:5782014-5782134 ( 62) CACTGTTG 1 chr3R:24659312-24659432 ( 21) CACTGTTG 1 chr3R:9130351-9130471 ( 57) CACTGTTG 1 chr2L:9684123-9684243 ( 89) CACTGTTG 1 chr3L:18748092-18748212 ( 52) CACTGTTG 1 chr3L:5575681-5575801 ( 112) CACTGTAC 1 chr2L:14159579-14159699 ( 42) TACAGTGT 1 chr2R:6665934-6666054 ( 4) TACAGTGT 1 chr3R:12995585-12995705 ( 88) AACAGTGT 1 chr2L:2144638-2144758 ( 76) CACTGTAC 1 chrX:16004928-16005048 ( 81) CACTGTAC 1 chrX:19306796-19306916 ( 74) CACTGTTT 1 chr3L:17408181-17408301 ( 14) AACAGTGA 1 chr2R:13438367-13438487 ( 43) TACAGTGA 1 chr2L:5300424-5300544 ( 59) CACTGTTT 1 chr3R:21606893-21607013 ( 46) TACAGTGA 1 chr3L:20949708-20949828 ( 21) CACAGTAG 1 chr2L:5224876-5224996 ( 97) CACTGTTT 1 chr2L:8736543-8736663 ( 86) AACAGTGA 1 chr2L:10590804-10590924 ( 78) CACTGTTT 1 chr2L:19373193-19373313 ( 86) CACTGTTT 1 chr3L:19704384-19704504 ( 79) CACTGTTT 1 chrX:7616415-7616535 ( 68) AACAGTGA 1 chrX:16062881-16063001 ( 32) TACAGTGA 1 chr3L:1166058-1166178 ( 25) TACAGTGA 1 chr3L:8576588-8576708 ( 35) AACAGTGA 1 chr3R:12998368-12998488 ( 42) TACAGTGA 1 chr3R:19319589-19319709 ( 33) AACAGTGA 1 chr2R:10868998-10869118 ( 43) AACAGTGA 1 chr3R:21189631-21189751 ( 39) AACAGTGA 1 chr2R:14138131-14138251 ( 14) AACAGTGA 1 chr2L:6816520-6816640 ( 57) AACAGTGA 1 chr3L:4501545-4501665 ( 52) TACAGTGA 1 chr2R:13846226-13846346 ( 75) CACTGTTA 1 chr2L:7516169-7516289 ( 88) CACTGTTA 1 chrX:390680-390800 ( 51) GACAGTGC 1 chr3R:9049350-9049470 ( 34) AACTGTGT 1 chr3R:29372615-29372735 ( 52) CACTGTCC 1 chr2R:8650238-8650358 ( 93) CACTGTAG 1 chr3R:22163538-22163658 ( 81) CACTGTAG 1 chr3L:14160986-14161106 ( 46) GACTGTGC 1 chrX:13237548-13237668 ( 69) GACTGTGC 1 chr3L:1406211-1406331 ( 15) CACAGTCG 1 chr3L:22680996-22681116 ( 65) GACTGTGC 1 chr3R:23384958-23385078 ( 13) CACAGTAT 1 chr4:56877-56997 ( 88) CACAGTAT 1 chr2L:18390116-18390236 ( 41) CACACTGC 1 chr3R:16319679-16319799 ( 40) CACACTGC 1 chr2L:7580150-7580270 ( 34) GACAGTGG 1 chrX:19667625-19667745 ( 89) CACTGTCG 1 chr2R:23977864-23977984 ( 65) CACTGTAT 1 chr3L:15694556-15694676 ( 85) CACTGTAT 1 chr3L:21284200-21284320 ( 79) CACTGTAT 1 chr3R:19024900-19025020 ( 14) CACTGTAT 1 chrX:17726015-17726135 ( 62) CACTGTAA 1 chr3L:21497523-21497643 ( 55) TACAGTTC 1 chr2L:14011744-14011864 ( 40) CACAGTCT 1 chr3R:5271006-5271126 ( 19) CACTGTAA 1 chrX:17353849-17353969 ( 85) CACTGTAA 1 chr3L:20585784-20585904 ( 23) CACAGTCA 1 chr3L:2433974-2434094 ( 33) CACAGTCA 1 chr2R:21195948-21196068 ( 39) CACACTGG 1 chr3R:6460897-6461017 ( 65) CACACTGG 1 chr3R:14279475-14279595 ( 25) CACACTGG 1 chr2R:14438334-14438454 ( 73) CACTGTCT 1 chr3R:4831813-4831933 ( 65) TACAGTTG 1 chr2R:13611599-13611719 ( 19) TACAGTTG 1 chr3L:7868999-7869119 ( 30) TACAGTTG 1 chr3R:4684909-4685029 ( 52) CACTCTGG 1 chr3R:13699459-13699579 ( 69) CACTGTCA 1 chr2L:5786815-5786935 ( 79) CACTGTCA 1 chr2L:11473135-11473255 ( 90) GACTGTGT 1 chr2R:23726466-23726586 ( 34) AACAGTTG 1 chrX:17110674-17110794 ( 21) CACACTGA 1 chr2R:21886409-21886529 ( 54) CACACTGA 1 chrX:1773587-1773707 ( 57) TACTGTTG 1 chr3L:17630847-17630967 ( 54) CACACTGA 1 chr3R:3790423-3790543 ( 97) TACAGTTT 1 chr3L:27262779-27262899 ( 42) TACAGTTT 1 chr2L:22924654-22924774 ( 63) AACAGTTT 1 chr2R:5421073-5421193 ( 56) TACAGTTT 1 chr3R:11958061-11958181 ( 55) AACAGTTT 1 chr3R:17395549-17395669 ( 42) TACAGTTT 1 chrX:6706661-6706781 ( 69) AACTGTAC 1 chr2R:11656143-11656263 ( 35) TACAGTTA 1 chrX:7591051-7591171 ( 21) TACAGTCC 1 chr3R:24520908-24521028 ( 29) TACAGTAG 1 chr2L:10260510-10260630 ( 27) AACTGTTT 1 chr2L:22139901-22140021 ( 88) AACTGTAG 1 chr2L:19440425-19440545 ( 91) AACTGTAG 1 chr3L:21285057-21285177 ( 87) GACTGTTC 1 chr3R:7093736-7093856 ( 19) TACAGTAT 1 chr3R:8724071-8724191 ( 35) TACAGTAT 1 chr3L:11554912-11555032 ( 101) GACTGTTG 1 chr3L:23081362-23081482 ( 54) AACTGTAT 1 chr2R:2846274-2846394 ( 51) TACTGTAT 1 chr2R:13561097-13561217 ( 19) GACAGTTT 1 chrX:5964206-5964326 ( 101) AACTGTAA 1 chr3L:13488470-13488590 ( 39) GACAGTTT 1 chr3R:15688569-15688689 ( 87) AACTGTAA 1 chr3R:10709440-10709560 ( 19) AACACTGG 1 chrX:1903722-1903842 ( 18) AACAGTCA 1 chr4:1063754-1063874 ( 50) CACACTTT 1 chr2L:3570755-3570875 ( 71) AACTGTCA 1 chr2L:10341448-10341568 ( 83) GACTGTTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.60063 E= 3.0e-122 -73 156 -198 -76 175 -1437 -1437 -1437 -1437 231 -1437 -1437 91 -1437 -1437 57 -1437 -196 221 -1437 -1437 -1437 -1437 176 -134 -184 161 -57 -49 71 20 -41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 212 E= 3.0e-122 0.179245 0.594340 0.051887 0.174528 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.561321 0.000000 0.000000 0.438679 0.000000 0.051887 0.948113 0.000000 0.000000 0.000000 0.000000 1.000000 0.117925 0.056604 0.627358 0.198113 0.212264 0.330189 0.235849 0.221698 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACWGTGN MEME-1 regular expression -------------------------------------------------------------------------------- CAC[AT]GTG[CGTA] -------------------------------------------------------------------------------- Time 7.51 secs. ******************************************************************************** ******************************************************************************** MOTIF ACAAACTG MEME-2 width = 8 sites = 22 llr = 219 E-value = 4.4e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 9:aaa::: pos.-specific C :7:::a:: probability G 13:::::a matrix T ::::::a: bits 2.3 * * 2.1 * * 1.8 ****** 1.6 ****** Relative 1.4 ******** Entropy 1.2 ******** (14.3 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel ACAAACTG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:7868999-7869119 1 1.95e-05 . ACAAACTG TCTGCGAATT chr2R:5126423-5126543 69 1.95e-05 cagtttcttg acaaactg TATATACAAT chr4:421177-421297 48 1.95e-05 cagtttcttg acaaactg TATGTACATA chr2R:6665934-6666054 27 1.95e-05 cagtttcttg acaaactg TACATTTATG chr2L:22924654-22924774 75 1.95e-05 cagtttcttg acaaactg TATATATATT chr4:976728-976848 56 1.95e-05 aagttttttg acaaactg TACATACTGT chr3R:4684909-4685029 19 1.95e-05 cagtttcttg acaaactg TATATTGTTC chr3L:10373450-10373570 25 1.95e-05 CTTGTGGCTA ACAAACTG TATTTTTTTC chr2L:10260510-10260630 70 1.95e-05 CACTTTTTTG ACAAACTG TTTGCGAATG chr3R:11958061-11958181 67 1.95e-05 cagtttcttg acaaactg TATGCCGAAT chr2L:2144638-2144758 60 1.95e-05 GCAGCAAGAC ACAAACTG ACGACAGCCA chr2L:19440425-19440545 65 1.95e-05 TAAGTTTTTA ACAAACTG GTGTATAGTT chr4:226890-227010 89 1.95e-05 cagtttcttg acaaactg TATGTATATC chr3L:27279966-27280086 65 3.92e-05 cagtttgtca agaaactg tttacacact chr3R:4518501-4518621 47 3.92e-05 cagtttgtca agaaactg tttacacact chr3R:3790423-3790543 109 3.92e-05 cagtttgtca agaaactg ttta chr2R:5421073-5421193 68 3.92e-05 cagtttgtca agaaactg tttacacgct chr4:1063552-1063672 62 3.92e-05 cagtttgtca agaaactg tttacacact chr2R:21195948-21196068 96 3.92e-05 ACATATTGGC AGAAACTG TTTTTCATTT chr3R:6460897-6461017 53 3.92e-05 cagtttgtca agaaactg tttacacact chr2L:7516169-7516289 72 5.26e-05 TCTTTGATGC GCAAACTG CTGGCAGGCA chr2R:11656143-11656263 67 5.26e-05 CGCACCAAGC GCAAACTG CGTCATTGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:7868999-7869119 1.9e-05 [+2]_112 chr2R:5126423-5126543 1.9e-05 68_[+2]_44 chr4:421177-421297 1.9e-05 47_[+2]_65 chr2R:6665934-6666054 1.9e-05 26_[+2]_86 chr2L:22924654-22924774 1.9e-05 74_[+2]_38 chr4:976728-976848 1.9e-05 55_[+2]_57 chr3R:4684909-4685029 1.9e-05 18_[+2]_94 chr3L:10373450-10373570 1.9e-05 24_[+2]_88 chr2L:10260510-10260630 1.9e-05 69_[+2]_43 chr3R:11958061-11958181 1.9e-05 66_[+2]_46 chr2L:2144638-2144758 1.9e-05 59_[+2]_53 chr2L:19440425-19440545 1.9e-05 64_[+2]_48 chr4:226890-227010 1.9e-05 88_[+2]_24 chr3L:27279966-27280086 3.9e-05 64_[+2]_48 chr3R:4518501-4518621 3.9e-05 46_[+2]_66 chr3R:3790423-3790543 3.9e-05 108_[+2]_4 chr2R:5421073-5421193 3.9e-05 67_[+2]_45 chr4:1063552-1063672 3.9e-05 61_[+2]_51 chr2R:21195948-21196068 3.9e-05 95_[+2]_17 chr3R:6460897-6461017 3.9e-05 52_[+2]_60 chr2L:7516169-7516289 5.3e-05 71_[+2]_41 chr2R:11656143-11656263 5.3e-05 66_[+2]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACAAACTG width=8 seqs=22 chr3L:7868999-7869119 ( 1) ACAAACTG 1 chr2R:5126423-5126543 ( 69) ACAAACTG 1 chr4:421177-421297 ( 48) ACAAACTG 1 chr2R:6665934-6666054 ( 27) ACAAACTG 1 chr2L:22924654-22924774 ( 75) ACAAACTG 1 chr4:976728-976848 ( 56) ACAAACTG 1 chr3R:4684909-4685029 ( 19) ACAAACTG 1 chr3L:10373450-10373570 ( 25) ACAAACTG 1 chr2L:10260510-10260630 ( 70) ACAAACTG 1 chr3R:11958061-11958181 ( 67) ACAAACTG 1 chr2L:2144638-2144758 ( 60) ACAAACTG 1 chr2L:19440425-19440545 ( 65) ACAAACTG 1 chr4:226890-227010 ( 89) ACAAACTG 1 chr3L:27279966-27280086 ( 65) AGAAACTG 1 chr3R:4518501-4518621 ( 47) AGAAACTG 1 chr3R:3790423-3790543 ( 109) AGAAACTG 1 chr2R:5421073-5421193 ( 68) AGAAACTG 1 chr4:1063552-1063672 ( 62) AGAAACTG 1 chr2R:21195948-21196068 ( 96) AGAAACTG 1 chr3R:6460897-6461017 ( 53) AGAAACTG 1 chr2L:7516169-7516289 ( 72) GCAAACTG 1 chr2R:11656143-11656263 ( 67) GCAAACTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6807 E= 4.4e-004 161 -1110 -117 -1110 -1110 175 63 -1110 174 -1110 -1110 -1110 174 -1110 -1110 -1110 174 -1110 -1110 -1110 -1110 231 -1110 -1110 -1110 -1110 -1110 176 -1110 -1110 229 -1110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 22 E= 4.4e-004 0.909091 0.000000 0.090909 0.000000 0.000000 0.681818 0.318182 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACAAACTG MEME-2 regular expression -------------------------------------------------------------------------------- A[CG]AAACTG -------------------------------------------------------------------------------- Time 13.43 secs. ******************************************************************************** ******************************************************************************** MOTIF YMAAAART MEME-3 width = 8 sites = 117 llr = 774 E-value = 3.4e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 Description -------------------------------------------------------------------------------- Simplified A 239aaa3: pos.-specific C 44:::::1 probability G 121:::7: matrix T 21:::::9 bits 2.3 2.1 1.8 ** 1.6 *** Relative 1.4 **** * Entropy 1.2 ****** (9.5 bits) 0.9 ****** 0.7 ****** 0.5 ****** 0.2 ******** 0.0 -------- Multilevel CCAAAAGT consensus TA A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:22680996-22681116 17 1.95e-05 GTCGCCGTCA CCAAAAGT ATTTCAATAT chr2L:6749598-6749718 104 1.95e-05 TGCCCTCGCC CCAAAAGT TCCCTTTCA chr3L:20585784-20585904 34 1.95e-05 ACAGTCAGCG CCAAAAGT ATCTTCTCCT chr3L:2433974-2434094 44 1.95e-05 ACAGTCACTG CCAAAAGT ACGCGGCCAG chr3L:8576588-8576708 46 1.95e-05 ACAGTGACTA CCAAAAGT GCGCTTCCCT chr3L:13210379-13210499 51 1.95e-05 ACAGTTGCCA CCAAAAGT TTCTTCCCTC chr3R:6760999-6761119 39 4.82e-05 ACAAATATTA CAAAAAGT ATCTGCTAGA chr3L:21274110-21274230 40 4.82e-05 ACAGCAGCTG CAAAAAGT CTTTGAACGA chr3R:16319679-16319799 51 4.82e-05 ACACTGCCAG CAAAAAGT CAGCTAACGG chr2R:14073622-14073742 71 4.82e-05 ACAGTGCCAG CAAAAAGT AAATACCCAC chr2L:14011744-14011864 51 4.82e-05 ACAGTCTGTT CAAAAAGT AAGCAGCCAA chr2L:13584540-13584660 52 4.82e-05 ACAGTGGGCG CAAAAAGT CAGCATTCTG chr2L:4821922-4822042 65 4.82e-05 ACAGTTGATG CAAAAAGT TCTCAAACCA chr3R:5271006-5271126 61 4.82e-05 ACACTGAGTG CAAAAAGT ACTCGCATGG chr3L:1166058-1166178 36 4.82e-05 ACAGTGACAC CAAAAAGT GCGTGGCCCG chr2L:18330420-18330540 54 4.82e-05 ACAGTGCCGA CAAAAAGT TTGCACCCAT chr3R:17880357-17880477 50 6.79e-05 ACAGTGCGTG CGAAAAGT GTGTGCCACG chrX:17519558-17519678 46 6.79e-05 ACAGTGATCT CGAAAAGT ATGCAGACCA chr3L:469844-469964 40 6.79e-05 ACAGTGCTGC CGAAAAGT AAACGAACCG chr3L:19240540-19240660 10 6.79e-05 CAGTGCATA CGAAAAGT CGTTGAACCG chr3R:19319589-19319709 44 6.79e-05 ACAGTGACAG CGAAAAGT GTGTGGCTAA chr2L:7580150-7580270 45 6.79e-05 ACAGTGGCGT CGAAAAGT GGTTCCACAA chr2R:24082201-24082321 101 6.79e-05 TTTTCAGCCA CGAAAAGT GATCTGACCA chr2R:10783037-10783157 94 9.63e-05 ACAGTGCCTT TCAAAAGT TGTGTTTCGA chr3L:329320-329440 46 9.63e-05 TGTTTCCCTT TCAAAAGT CTTCGTCCGA chr2R:5993190-5993310 108 9.63e-05 TTTTCTTTGT TCAAAAGT GCCTC chr3R:14477621-14477741 18 9.63e-05 CATACATTTC TCAAAAGT CCGGCCAAAA chr3L:12590111-12590231 43 9.63e-05 ACAGTGGGCT TCAAAAGT ATGTGTACAT chr3L:15329428-15329548 60 1.25e-04 TAAAAAGCTT CCAAAAAT AAAACAGAAC chrX:7591051-7591171 32 1.25e-04 ACAGTCCGGG CCAAAAAT CGCCTTGAAT chr2L:21873809-21873929 60 1.25e-04 TAATGTTTTC CCAAAAAT GTTCTCATTG chr4:226890-227010 47 1.25e-04 accattaaag ccaaaaat tcaacttatt chr3L:1406211-1406331 26 1.53e-04 ACAGTCGCCG ACAAAAGT TTGCCCTCAG chr2L:5186655-5186775 30 1.53e-04 ACAGTGCCGC ACAAAAGT GTGTGTACAC chr2L:12341814-12341934 76 1.53e-04 ACACTGAGCT ACAAAAGT ATGCAGCAAG chrX:7616415-7616535 51 1.53e-04 ACGGTGGCTG ACAAAAGT CTGCGACCAA chr3R:14279475-14279595 36 1.53e-04 ACACTGGCTC ACAAAAGT CTGCAGTCTG chr2L:10339610-10339730 82 1.73e-04 ACAGTTGCGG GCAAAAGT ATACGTACAT chr3R:19875700-19875820 37 1.73e-04 ACAGTGGCGC GCAAAAGT ATTCGCACTC chr3R:11640346-11640466 104 1.73e-04 aaaggcaaaa gcaaaagt caaatgaaa chr2R:21195948-21196068 50 1.73e-04 ACACTGGGTG GCAAAAGT GTGCGCCACG chr2R:13846226-13846346 28 2.15e-04 TCTTGCCAAA TAAAAAGT ATCTCAGAGC chr4:976728-976848 42 2.15e-04 tcacagtgtg taaaaagt tttttgacaa chr3R:18244238-18244358 45 2.15e-04 ACAGTGGCTG TAAAAAGT TAACAAACAT chr2R:6197452-6197572 1 2.15e-04 . TAAAAAGT GCACACAAGT chr3R:21606893-21607013 58 2.57e-04 CAGTGACTAC CAAAAAAT ACTAGCAGGC chr2L:7516169-7516289 17 2.57e-04 GGAATCGAGT CAAAAAAT CGAGGCTAAA chr2L:16457346-16457466 83 2.57e-04 CGCAATAACT CAAAAAAT ACTTGCCCCG chr3R:6460897-6461017 32 2.57e-04 CATGCAAAGA CAAAAAAT GTAcagtttg chr2R:21886409-21886529 67 2.99e-04 ACTGACTCCT AAAAAAGT TCACACGCTG chr3R:7093736-7093856 109 2.99e-04 CGCATTAATA AAAAAAGT ATAT chr4:1054532-1054652 50 2.99e-04 Acagtttgtc aaaaaagt gtttagacac chr2R:13611599-13611719 73 3.57e-04 ATAACTGTTG GAAAAAGT ATTTTCCACC chr3L:506962-507082 50 3.57e-04 ACAGTGACTG TGAAAAGT CTGTCGACAA chr3R:17947435-17947555 54 3.57e-04 ACAGTGCAGC TGAAAAGT AAAACTTCAG chr3L:15030457-15030577 25 3.57e-04 ACACTCAGTT GAAAAAGT ATGTGCACCA chr2R:9711537-9711657 80 4.14e-04 GCAATCGCAA CTAAAAGT ACAGCTCCAC chr2L:14159579-14159699 53 4.14e-04 ACAGTGTCTA CTAAAAGT AAACCTACAA chr3L:2765154-2765274 20 4.14e-04 ACACTGCCTG CGAAAAAT GAGCGATCAC chr2R:5126423-5126543 27 4.85e-04 acctttaagg tcaaaaat tcaacttatt chr4:421177-421297 6 4.85e-04 taaag tcaaaaat gcaacttatt chr3R:26892921-26893041 65 4.85e-04 AATTGGTCTT TCAAAAAT CACCATTCAC chr3R:10081612-10081732 29 4.85e-04 TGTCAGCGAT AGAAAAGT TTCCAACGCT chr2L:22924654-22924774 33 4.85e-04 acctttaaag tcaaaaat tcaacttatt chr3R:11958061-11958181 25 4.85e-04 acctttaaag tcaaaaat tcaacttatt chr3R:21189631-21189751 50 4.85e-04 ACAGTGAGTG AGAAAAGT GTGACGACAT chrX:16774636-16774756 25 4.85e-04 ACAGTGGCGC AGAAAAGT GCGCGGTCGG chr3L:818870-818990 35 5.18e-04 ACAGTGCCGC CCGAAAGT TTATTCATAT chr3L:7868999-7869119 67 5.18e-04 ACCTCGGCCG GGAAAAGT CGCGTGAATT chr2R:8650238-8650358 23 5.18e-04 ATTAATCGAA CCGAAAGT CCACGAACAA chr3L:15291259-15291379 59 5.18e-04 ACACTTACTT CCGAAAGT ATTCCACCGT chr2L:7559484-7559604 53 5.73e-04 ACAGTGGCTG CCAAAAGC CCTCGCCCCA chrX:14923811-14923931 45 5.73e-04 CAGACCAGCG CCAAAAGC TTCCACCACG chr3R:31683900-31684020 52 5.73e-04 TTAGTGGCAG CCAAAAGC AACAGTGCAT chr2L:8736543-8736663 55 5.73e-04 AGTTAAACTT ACAAAAAT TCATTTATTT chr3R:24521423-24521543 13 5.73e-04 GTTTATATAG ACAAAAAT AAACCCGAAT chr3L:17630847-17630967 65 5.73e-04 ACACTGACTA CCAAAAGC ATTCGCTGAT chrX:10899280-10899400 96 6.63e-04 AAATTCCAAG TAAAAAAT AAACGATATT chr3R:3790423-3790543 79 6.63e-04 cactttgaac taaaaaat gcctaccata chr2R:8759656-8759776 21 6.63e-04 TATATTATTT TAAAAAAT AACCAAATAC chr2R:8053121-8053241 56 6.63e-04 CTTGCTTGTT TAAAAAAT GTTCCTACGC chrX:17503707-17503827 8 6.63e-04 AAATCAT TAAAAAAT AATCATCTTT chr3L:14184438-14184558 54 6.83e-04 ACAGTGTGGC CAGAAAGT ATGTTCCCAG chr2L:23313804-23313924 68 7.64e-04 GGTAATATTT AAAAAAAT GTTGAGTCCT chr3L:6314567-6314687 31 7.64e-04 ACAGTGCCTC AAAAAAAT GCTCACACAA chrX:13222300-13222420 53 7.64e-04 AGTGACGTTC AAAAAAAT GCAGACGACC chr2L:12700672-12700792 93 7.64e-04 AAGGGGTTCA AAAAAAAT CATAAGAAAA chr2L:5484071-5484191 48 7.64e-04 ACAGTGGGTC CAAAAAGC AAACCACCCA chr3L:23555450-23555570 53 7.64e-04 ATTCCATTTA AAAAAAAT ATTTAAAACA chrX:7202552-7202672 58 8.90e-04 CAAGAAATTA TTAAAAGT CTACCGTGCA chr2R:5496138-5496258 34 8.90e-04 AATTATCAGA GAAAAAAT GTATTTAACT chr2R:13438367-13438487 76 8.90e-04 gtccttcata ttaaaagt tcttagacta chr2R:18585271-18585391 97 8.90e-04 TTAATTGAAA TGAAAAAT AGCCGCCCAT chr3L:14303382-14303502 22 8.90e-04 TTTTTGCACT GAAAAAAT ATTTGTTTCA chr2R:11656143-11656263 46 8.90e-04 ACAGTTAGTG GAAAAAAT ATGCGCACCA chr2L:11473135-11473255 46 8.90e-04 AAAGTGAGGC TTAAAAGT GCCCCAGGTC chrX:17353849-17353969 43 8.90e-04 AATAAAATTT GAAAAAAT TATAACTTGA chr3R:17395549-17395669 53 8.90e-04 ACAGTTTGTT TGAAAAAT ATATGTACAT chr3L:27279966-27280086 113 9.44e-04 gactttaaag ctaaaaat chrX:12547728-12547848 87 9.44e-04 ACCCTTATGA CTAAAAAT TTCAACGCAG chr2R:23726466-23726586 45 9.44e-04 ACAGTTGGCG CGGAAAGT CTTCGGCCGG chr2L:4791537-4791657 33 1.06e-03 ACAGTGGCGG TCGAAAGT AATGGGACAC chr3L:17408181-17408301 45 1.06e-03 TCAAACGCGC AGAAAAAT ATAATACAAG chr3L:24537718-24537838 94 1.06e-03 AGCCTTTAAA AGAAAAAT GTCAGAATCA chr3R:9049350-9049470 22 1.06e-03 ACACTTGTCG ATAAAAGT TTTGAACTGT chr3L:5573219-5573339 55 1.06e-03 ACAGTGCCTG TCGAAAGT CTGCGATCCC chr3R:6658676-6658796 50 1.16e-03 ACAGTGGCTA GTAAAAGT TTTCCTACAG chr2L:15506915-15507035 9 1.16e-03 TGCAATGC GGAAAAAT CCAAGTCCGA chr3L:4501545-4501665 62 1.16e-03 TACAGTGAGT GTAAAAGT AAACTCGACA chr2L:10428666-10428786 62 1.20e-03 TGTTTAGTTT CCAAAAAC TTGAAGCACT chr2R:14267621-14267741 97 1.20e-03 TTCCAAAACT CCAAAAAC GCAACGTACG chr3R:23384958-23385078 24 1.20e-03 ACAGTATCCG ACGAAAGT TTTTCACCGA chr2L:11423962-11424082 53 1.20e-03 CGAAGGAAGG ACGAAAGT GGTTGTGTGT chr2L:5786815-5786935 103 1.24e-03 AGTAAATGGA GCAAAAGC GACATCGCAA chr3R:24520908-24521028 40 1.62e-03 ACAGTAGGTA CCATAAGT GCACGCACCG chr3L:21465630-21465750 14 1.88e-03 ACAGTGCCTG CCCAAAGT AAACTCCACA chrX:21281610-21281730 49 2.03e-03 ACACTTCCTT CAATAAGT AAACTTACAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:22680996-22681116 1.9e-05 16_[+3]_96 chr2L:6749598-6749718 1.9e-05 103_[+3]_9 chr3L:20585784-20585904 1.9e-05 33_[+3]_79 chr3L:2433974-2434094 1.9e-05 43_[+3]_69 chr3L:8576588-8576708 1.9e-05 45_[+3]_67 chr3L:13210379-13210499 1.9e-05 50_[+3]_62 chr3R:6760999-6761119 4.8e-05 38_[+3]_74 chr3L:21274110-21274230 4.8e-05 39_[+3]_73 chr3R:16319679-16319799 4.8e-05 50_[+3]_62 chr2R:14073622-14073742 4.8e-05 70_[+3]_42 chr2L:14011744-14011864 4.8e-05 50_[+3]_62 chr2L:13584540-13584660 4.8e-05 51_[+3]_61 chr2L:4821922-4822042 4.8e-05 64_[+3]_48 chr3R:5271006-5271126 4.8e-05 60_[+3]_52 chr3L:1166058-1166178 4.8e-05 35_[+3]_77 chr2L:18330420-18330540 4.8e-05 53_[+3]_59 chr3R:17880357-17880477 6.8e-05 49_[+3]_63 chrX:17519558-17519678 6.8e-05 45_[+3]_67 chr3L:469844-469964 6.8e-05 39_[+3]_73 chr3L:19240540-19240660 6.8e-05 9_[+3]_103 chr3R:19319589-19319709 6.8e-05 43_[+3]_69 chr2L:7580150-7580270 6.8e-05 44_[+3]_68 chr2R:24082201-24082321 6.8e-05 100_[+3]_12 chr2R:10783037-10783157 9.6e-05 93_[+3]_19 chr3L:329320-329440 9.6e-05 45_[+3]_67 chr2R:5993190-5993310 9.6e-05 107_[+3]_5 chr3R:14477621-14477741 9.6e-05 17_[+3]_95 chr3L:12590111-12590231 9.6e-05 42_[+3]_70 chr3L:15329428-15329548 0.00012 59_[+3]_53 chrX:7591051-7591171 0.00012 31_[+3]_81 chr2L:21873809-21873929 0.00012 59_[+3]_53 chr4:226890-227010 0.00012 46_[+3]_66 chr3L:1406211-1406331 0.00015 25_[+3]_87 chr2L:5186655-5186775 0.00015 29_[+3]_83 chr2L:12341814-12341934 0.00015 75_[+3]_37 chrX:7616415-7616535 0.00015 50_[+3]_62 chr3R:14279475-14279595 0.00015 35_[+3]_77 chr2L:10339610-10339730 0.00017 81_[+3]_31 chr3R:19875700-19875820 0.00017 36_[+3]_76 chr3R:11640346-11640466 0.00017 103_[+3]_9 chr2R:21195948-21196068 0.00017 49_[+3]_63 chr2R:13846226-13846346 0.00022 27_[+3]_85 chr4:976728-976848 0.00022 41_[+3]_71 chr3R:18244238-18244358 0.00022 44_[+3]_68 chr2R:6197452-6197572 0.00022 [+3]_112 chr3R:21606893-21607013 0.00026 57_[+3]_55 chr2L:7516169-7516289 0.00026 16_[+3]_96 chr2L:16457346-16457466 0.00026 82_[+3]_30 chr3R:6460897-6461017 0.00026 31_[+3]_81 chr2R:21886409-21886529 0.0003 66_[+3]_46 chr3R:7093736-7093856 0.0003 108_[+3]_4 chr4:1054532-1054652 0.0003 49_[+3]_63 chr2R:13611599-13611719 0.00036 72_[+3]_40 chr3L:506962-507082 0.00036 49_[+3]_63 chr3R:17947435-17947555 0.00036 53_[+3]_59 chr3L:15030457-15030577 0.00036 24_[+3]_88 chr2R:9711537-9711657 0.00041 79_[+3]_33 chr2L:14159579-14159699 0.00041 52_[+3]_60 chr3L:2765154-2765274 0.00041 19_[+3]_93 chr2R:5126423-5126543 0.00048 26_[+3]_86 chr4:421177-421297 0.00048 5_[+3]_107 chr3R:26892921-26893041 0.00048 64_[+3]_48 chr3R:10081612-10081732 0.00048 28_[+3]_84 chr2L:22924654-22924774 0.00048 32_[+3]_80 chr3R:11958061-11958181 0.00048 24_[+3]_88 chr3R:21189631-21189751 0.00048 49_[+3]_63 chrX:16774636-16774756 0.00048 24_[+3]_88 chr3L:818870-818990 0.00052 34_[+3]_78 chr3L:7868999-7869119 0.00052 66_[+3]_46 chr2R:8650238-8650358 0.00052 22_[+3]_90 chr3L:15291259-15291379 0.00052 58_[+3]_54 chr2L:7559484-7559604 0.00057 52_[+3]_60 chrX:14923811-14923931 0.00057 44_[+3]_68 chr3R:31683900-31684020 0.00057 51_[+3]_61 chr2L:8736543-8736663 0.00057 54_[+3]_58 chr3R:24521423-24521543 0.00057 12_[+3]_100 chr3L:17630847-17630967 0.00057 64_[+3]_48 chrX:10899280-10899400 0.00066 95_[+3]_17 chr3R:3790423-3790543 0.00066 78_[+3]_34 chr2R:8759656-8759776 0.00066 20_[+3]_92 chr2R:8053121-8053241 0.00066 55_[+3]_57 chrX:17503707-17503827 0.00066 7_[+3]_105 chr3L:14184438-14184558 0.00068 53_[+3]_59 chr2L:23313804-23313924 0.00076 67_[+3]_45 chr3L:6314567-6314687 0.00076 30_[+3]_82 chrX:13222300-13222420 0.00076 52_[+3]_60 chr2L:12700672-12700792 0.00076 92_[+3]_20 chr2L:5484071-5484191 0.00076 47_[+3]_65 chr3L:23555450-23555570 0.00076 52_[+3]_60 chrX:7202552-7202672 0.00089 57_[+3]_55 chr2R:5496138-5496258 0.00089 33_[+3]_79 chr2R:13438367-13438487 0.00089 75_[+3]_37 chr2R:18585271-18585391 0.00089 96_[+3]_16 chr3L:14303382-14303502 0.00089 21_[+3]_91 chr2R:11656143-11656263 0.00089 45_[+3]_67 chr2L:11473135-11473255 0.00089 45_[+3]_67 chrX:17353849-17353969 0.00089 42_[+3]_70 chr3R:17395549-17395669 0.00089 52_[+3]_60 chr3L:27279966-27280086 0.00094 112_[+3] chrX:12547728-12547848 0.00094 86_[+3]_26 chr2R:23726466-23726586 0.00094 44_[+3]_68 chr2L:4791537-4791657 0.0011 32_[+3]_80 chr3L:17408181-17408301 0.0011 44_[+3]_68 chr3L:24537718-24537838 0.0011 93_[+3]_19 chr3R:9049350-9049470 0.0011 21_[+3]_91 chr3L:5573219-5573339 0.0011 54_[+3]_58 chr3R:6658676-6658796 0.0012 49_[+3]_63 chr2L:15506915-15507035 0.0012 8_[+3]_104 chr3L:4501545-4501665 0.0012 61_[+3]_51 chr2L:10428666-10428786 0.0012 61_[+3]_51 chr2R:14267621-14267741 0.0012 96_[+3]_16 chr3R:23384958-23385078 0.0012 23_[+3]_89 chr2L:11423962-11424082 0.0012 52_[+3]_60 chr2L:5786815-5786935 0.0012 102_[+3]_10 chr3R:24520908-24521028 0.0016 39_[+3]_73 chr3L:21465630-21465750 0.0019 13_[+3]_99 chrX:21281610-21281730 0.002 48_[+3]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YMAAAART width=8 seqs=117 chr3L:22680996-22681116 ( 17) CCAAAAGT 1 chr2L:6749598-6749718 ( 104) CCAAAAGT 1 chr3L:20585784-20585904 ( 34) CCAAAAGT 1 chr3L:2433974-2434094 ( 44) CCAAAAGT 1 chr3L:8576588-8576708 ( 46) CCAAAAGT 1 chr3L:13210379-13210499 ( 51) CCAAAAGT 1 chr3R:6760999-6761119 ( 39) CAAAAAGT 1 chr3L:21274110-21274230 ( 40) CAAAAAGT 1 chr3R:16319679-16319799 ( 51) CAAAAAGT 1 chr2R:14073622-14073742 ( 71) CAAAAAGT 1 chr2L:14011744-14011864 ( 51) CAAAAAGT 1 chr2L:13584540-13584660 ( 52) CAAAAAGT 1 chr2L:4821922-4822042 ( 65) CAAAAAGT 1 chr3R:5271006-5271126 ( 61) CAAAAAGT 1 chr3L:1166058-1166178 ( 36) CAAAAAGT 1 chr2L:18330420-18330540 ( 54) CAAAAAGT 1 chr3R:17880357-17880477 ( 50) CGAAAAGT 1 chrX:17519558-17519678 ( 46) CGAAAAGT 1 chr3L:469844-469964 ( 40) CGAAAAGT 1 chr3L:19240540-19240660 ( 10) CGAAAAGT 1 chr3R:19319589-19319709 ( 44) CGAAAAGT 1 chr2L:7580150-7580270 ( 45) CGAAAAGT 1 chr2R:24082201-24082321 ( 101) CGAAAAGT 1 chr2R:10783037-10783157 ( 94) TCAAAAGT 1 chr3L:329320-329440 ( 46) TCAAAAGT 1 chr2R:5993190-5993310 ( 108) TCAAAAGT 1 chr3R:14477621-14477741 ( 18) TCAAAAGT 1 chr3L:12590111-12590231 ( 43) TCAAAAGT 1 chr3L:15329428-15329548 ( 60) CCAAAAAT 1 chrX:7591051-7591171 ( 32) CCAAAAAT 1 chr2L:21873809-21873929 ( 60) CCAAAAAT 1 chr4:226890-227010 ( 47) CCAAAAAT 1 chr3L:1406211-1406331 ( 26) ACAAAAGT 1 chr2L:5186655-5186775 ( 30) ACAAAAGT 1 chr2L:12341814-12341934 ( 76) ACAAAAGT 1 chrX:7616415-7616535 ( 51) ACAAAAGT 1 chr3R:14279475-14279595 ( 36) ACAAAAGT 1 chr2L:10339610-10339730 ( 82) GCAAAAGT 1 chr3R:19875700-19875820 ( 37) GCAAAAGT 1 chr3R:11640346-11640466 ( 104) GCAAAAGT 1 chr2R:21195948-21196068 ( 50) GCAAAAGT 1 chr2R:13846226-13846346 ( 28) TAAAAAGT 1 chr4:976728-976848 ( 42) TAAAAAGT 1 chr3R:18244238-18244358 ( 45) TAAAAAGT 1 chr2R:6197452-6197572 ( 1) TAAAAAGT 1 chr3R:21606893-21607013 ( 58) CAAAAAAT 1 chr2L:7516169-7516289 ( 17) CAAAAAAT 1 chr2L:16457346-16457466 ( 83) CAAAAAAT 1 chr3R:6460897-6461017 ( 32) CAAAAAAT 1 chr2R:21886409-21886529 ( 67) AAAAAAGT 1 chr3R:7093736-7093856 ( 109) AAAAAAGT 1 chr4:1054532-1054652 ( 50) AAAAAAGT 1 chr2R:13611599-13611719 ( 73) GAAAAAGT 1 chr3L:506962-507082 ( 50) TGAAAAGT 1 chr3R:17947435-17947555 ( 54) TGAAAAGT 1 chr3L:15030457-15030577 ( 25) GAAAAAGT 1 chr2R:9711537-9711657 ( 80) CTAAAAGT 1 chr2L:14159579-14159699 ( 53) CTAAAAGT 1 chr3L:2765154-2765274 ( 20) CGAAAAAT 1 chr2R:5126423-5126543 ( 27) TCAAAAAT 1 chr4:421177-421297 ( 6) TCAAAAAT 1 chr3R:26892921-26893041 ( 65) TCAAAAAT 1 chr3R:10081612-10081732 ( 29) AGAAAAGT 1 chr2L:22924654-22924774 ( 33) TCAAAAAT 1 chr3R:11958061-11958181 ( 25) TCAAAAAT 1 chr3R:21189631-21189751 ( 50) AGAAAAGT 1 chrX:16774636-16774756 ( 25) AGAAAAGT 1 chr3L:818870-818990 ( 35) CCGAAAGT 1 chr3L:7868999-7869119 ( 67) GGAAAAGT 1 chr2R:8650238-8650358 ( 23) CCGAAAGT 1 chr3L:15291259-15291379 ( 59) CCGAAAGT 1 chr2L:7559484-7559604 ( 53) CCAAAAGC 1 chrX:14923811-14923931 ( 45) CCAAAAGC 1 chr3R:31683900-31684020 ( 52) CCAAAAGC 1 chr2L:8736543-8736663 ( 55) ACAAAAAT 1 chr3R:24521423-24521543 ( 13) ACAAAAAT 1 chr3L:17630847-17630967 ( 65) CCAAAAGC 1 chrX:10899280-10899400 ( 96) TAAAAAAT 1 chr3R:3790423-3790543 ( 79) TAAAAAAT 1 chr2R:8759656-8759776 ( 21) TAAAAAAT 1 chr2R:8053121-8053241 ( 56) TAAAAAAT 1 chrX:17503707-17503827 ( 8) TAAAAAAT 1 chr3L:14184438-14184558 ( 54) CAGAAAGT 1 chr2L:23313804-23313924 ( 68) AAAAAAAT 1 chr3L:6314567-6314687 ( 31) AAAAAAAT 1 chrX:13222300-13222420 ( 53) AAAAAAAT 1 chr2L:12700672-12700792 ( 93) AAAAAAAT 1 chr2L:5484071-5484191 ( 48) CAAAAAGC 1 chr3L:23555450-23555570 ( 53) AAAAAAAT 1 chrX:7202552-7202672 ( 58) TTAAAAGT 1 chr2R:5496138-5496258 ( 34) GAAAAAAT 1 chr2R:13438367-13438487 ( 76) TTAAAAGT 1 chr2R:18585271-18585391 ( 97) TGAAAAAT 1 chr3L:14303382-14303502 ( 22) GAAAAAAT 1 chr2R:11656143-11656263 ( 46) GAAAAAAT 1 chr2L:11473135-11473255 ( 46) TTAAAAGT 1 chrX:17353849-17353969 ( 43) GAAAAAAT 1 chr3R:17395549-17395669 ( 53) TGAAAAAT 1 chr3L:27279966-27280086 ( 113) CTAAAAAT 1 chrX:12547728-12547848 ( 87) CTAAAAAT 1 chr2R:23726466-23726586 ( 45) CGGAAAGT 1 chr2L:4791537-4791657 ( 33) TCGAAAGT 1 chr3L:17408181-17408301 ( 45) AGAAAAAT 1 chr3L:24537718-24537838 ( 94) AGAAAAAT 1 chr3R:9049350-9049470 ( 22) ATAAAAGT 1 chr3L:5573219-5573339 ( 55) TCGAAAGT 1 chr3R:6658676-6658796 ( 50) GTAAAAGT 1 chr2L:15506915-15507035 ( 9) GGAAAAAT 1 chr3L:4501545-4501665 ( 62) GTAAAAGT 1 chr2L:10428666-10428786 ( 62) CCAAAAAC 1 chr2R:14267621-14267741 ( 97) CCAAAAAC 1 chr3R:23384958-23385078 ( 24) ACGAAAGT 1 chr2L:11423962-11424082 ( 53) ACGAAAGT 1 chr2L:5786815-5786935 ( 103) GCAAAAGC 1 chr3R:24520908-24521028 ( 40) CCATAAGT 1 chr3L:21465630-21465750 ( 14) CCCAAAGT 1 chrX:21281610-21281730 ( 49) CAATAAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.56104 E= 3.4e+000 -60 111 -68 -30 20 99 -26 -179 162 -456 -141 -1351 172 -1351 -1351 -411 175 -1351 -1351 -1351 175 -1351 -1351 -1351 16 -1351 170 -1351 -1351 -156 -1351 166 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 117 E= 3.4e+000 0.196581 0.435897 0.128205 0.239316 0.341880 0.401709 0.170940 0.085470 0.914530 0.008547 0.076923 0.000000 0.982906 0.000000 0.000000 0.017094 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.000000 0.068376 0.000000 0.931624 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YMAAAART MEME-3 regular expression -------------------------------------------------------------------------------- [CT][CA]AAAA[GA]T -------------------------------------------------------------------------------- Time 19.32 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTTTKGC MEME-4 width = 8 sites = 26 llr = 234 E-value = 5.9e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :1:::::: pos.-specific C a::::::8 probability G ::::35a: matrix T :9aa75:2 bits 2.3 * * 2.1 * * 1.8 * ** * 1.6 * ** * Relative 1.4 **** ** Entropy 1.2 **** *** (13.0 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTTTGGC consensus GT T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:29621186-29621306 83 1.30e-05 GTTTTGATTG CTTTTGGC TTTATGACAG chr3R:19093434-19093554 92 1.30e-05 CGGGTGGCAA CTTTTGGC AGGCAGTGTG chrX:7591051-7591171 87 1.30e-05 GGTCAGTTTA CTTTTGGC AGTCAGTGTA chr3L:14291315-14291435 42 1.30e-05 GTGTTTCGTA CTTTTGGC TGGCACTGTT chr2L:1562869-1562989 81 1.30e-05 TGGCTGCTAA CTTTTGGC CAGCACTGTG chrX:17353849-17353969 109 1.30e-05 GGATTATTTA CTTTTGGC TTTG chr2L:10940764-10940884 56 4.07e-05 TGCTCGCATA CTTTTTGC ACTCACTGTG chr3L:20585784-20585904 79 4.07e-05 GAAGAAATCT CTTTGGGC ATTTGCAGGC chrX:19667625-19667745 9 4.07e-05 TATCGCAG CTTTGGGC AATTGGTATC chr3L:5575681-5575801 101 4.07e-05 TGTTAGATAA CTTTTTGC TTTCACTGTA chr2L:5092223-5092343 83 4.07e-05 TAGTCATTAG CTTTGGGC CTTAATTGCA chr3L:1145183-1145303 73 4.07e-05 TGTGCGCTGA CTTTTTGC GAGCAGTGTG chrX:4555732-4555852 67 4.07e-05 TCTTGCTCAA CTTTTTGC AGTCACTGTG chr2L:19229993-19230113 71 4.07e-05 GGACCGTTTA CTTTTTGC ACTCACTGTT chrX:17726015-17726135 99 5.37e-05 TGTTTGAGAT CTTTGTGC TTCTTttttg chr2L:10339610-10339730 52 5.37e-05 CCGACATGTC CTTTGTGC ACAAGTGCAT chr3L:11554912-11555032 76 5.37e-05 ACTCGAATTG CTTTGTGC CCATTACTTA chr2R:24082201-24082321 10 5.37e-05 ttcgattgt ctttgtgc ttgcgagtgt chrX:19306796-19306916 63 7.27e-05 GGTAGACTGC CTTTTGGT AGCCACTGTT chrX:5964206-5964326 32 7.27e-05 TGGCACATTA CTTTTGGT GTGCCATTTC chr3R:15688569-15688689 61 7.27e-05 GACAAGAATT CTTTTGGT CTACATACTT chr3L:4429006-4429126 92 1.13e-04 GTGGTGGAAA CTTTTTGT GGGCGCCGGC chrX:14923811-14923931 96 1.13e-04 GTGGCAACAC CTTTTTGT GGGTCACTGT chr2R:13789212-13789332 109 1.13e-04 AATCCGCCAC CTTTTTGT TCCC chr3R:18244238-18244358 60 1.45e-04 AGTTAACAAA CATTTGGC GATTCCTCTG chr3R:11193871-11193991 15 1.73e-04 TGCACATCAG CATTGGGC ATACATTTAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:29621186-29621306 1.3e-05 82_[+4]_30 chr3R:19093434-19093554 1.3e-05 91_[+4]_21 chrX:7591051-7591171 1.3e-05 86_[+4]_26 chr3L:14291315-14291435 1.3e-05 41_[+4]_71 chr2L:1562869-1562989 1.3e-05 80_[+4]_32 chrX:17353849-17353969 1.3e-05 108_[+4]_4 chr2L:10940764-10940884 4.1e-05 55_[+4]_57 chr3L:20585784-20585904 4.1e-05 78_[+4]_34 chrX:19667625-19667745 4.1e-05 8_[+4]_104 chr3L:5575681-5575801 4.1e-05 100_[+4]_12 chr2L:5092223-5092343 4.1e-05 82_[+4]_30 chr3L:1145183-1145303 4.1e-05 72_[+4]_40 chrX:4555732-4555852 4.1e-05 66_[+4]_46 chr2L:19229993-19230113 4.1e-05 70_[+4]_42 chrX:17726015-17726135 5.4e-05 98_[+4]_14 chr2L:10339610-10339730 5.4e-05 51_[+4]_61 chr3L:11554912-11555032 5.4e-05 75_[+4]_37 chr2R:24082201-24082321 5.4e-05 9_[+4]_103 chrX:19306796-19306916 7.3e-05 62_[+4]_50 chrX:5964206-5964326 7.3e-05 31_[+4]_81 chr3R:15688569-15688689 7.3e-05 60_[+4]_52 chr3L:4429006-4429126 0.00011 91_[+4]_21 chrX:14923811-14923931 0.00011 95_[+4]_17 chr2R:13789212-13789332 0.00011 108_[+4]_4 chr3R:18244238-18244358 0.00015 59_[+4]_53 chr3R:11193871-11193991 0.00017 14_[+4]_98 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTTTKGC width=8 seqs=26 chr3R:29621186-29621306 ( 83) CTTTTGGC 1 chr3R:19093434-19093554 ( 92) CTTTTGGC 1 chrX:7591051-7591171 ( 87) CTTTTGGC 1 chr3L:14291315-14291435 ( 42) CTTTTGGC 1 chr2L:1562869-1562989 ( 81) CTTTTGGC 1 chrX:17353849-17353969 ( 109) CTTTTGGC 1 chr2L:10940764-10940884 ( 56) CTTTTTGC 1 chr3L:20585784-20585904 ( 79) CTTTGGGC 1 chrX:19667625-19667745 ( 9) CTTTGGGC 1 chr3L:5575681-5575801 ( 101) CTTTTTGC 1 chr2L:5092223-5092343 ( 83) CTTTGGGC 1 chr3L:1145183-1145303 ( 73) CTTTTTGC 1 chrX:4555732-4555852 ( 67) CTTTTTGC 1 chr2L:19229993-19230113 ( 71) CTTTTTGC 1 chrX:17726015-17726135 ( 99) CTTTGTGC 1 chr2L:10339610-10339730 ( 52) CTTTGTGC 1 chr3L:11554912-11555032 ( 76) CTTTGTGC 1 chr2R:24082201-24082321 ( 10) CTTTGTGC 1 chrX:19306796-19306916 ( 63) CTTTTGGT 1 chrX:5964206-5964326 ( 32) CTTTTGGT 1 chr3R:15688569-15688689 ( 61) CTTTTGGT 1 chr3L:4429006-4429126 ( 92) CTTTTTGT 1 chrX:14923811-14923931 ( 96) CTTTTTGT 1 chr2R:13789212-13789332 ( 109) CTTTTTGT 1 chr3R:18244238-18244358 ( 60) CATTTGGC 1 chr3R:11193871-11193991 ( 15) CATTGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.83953 E= 5.9e+002 -1134 231 -1134 -1134 -195 -1134 -1134 165 -1134 -1134 -1134 176 -1134 -1134 -1134 176 -1134 -1134 59 123 -1134 -1134 139 65 -1134 -1134 229 -1134 -1134 193 -1134 -35 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 26 E= 5.9e+002 0.000000 1.000000 0.000000 0.000000 0.076923 0.000000 0.000000 0.923077 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.307692 0.692308 0.000000 0.000000 0.538462 0.461538 0.000000 0.000000 1.000000 0.000000 0.000000 0.769231 0.000000 0.230769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTKGC MEME-4 regular expression -------------------------------------------------------------------------------- CTTT[TG][GT]G[CT] -------------------------------------------------------------------------------- Time 24.99 secs. ******************************************************************************** ******************************************************************************** MOTIF CTGGGCGC MEME-5 width = 8 sites = 9 llr = 96 E-value = 1.7e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C 8:1:19:a probability G ::9a91a: matrix T 2a:::::: bits 2.3 * ** 2.1 * ** 1.8 ******* 1.6 ******* Relative 1.4 ******** Entropy 1.2 ******** (15.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTGGGCGC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:10081612-10081732 60 4.29e-06 GCAGAGTAAA CTGGGCGC TAACAGTTGG chr3R:23384958-23385078 100 4.29e-06 GAGCTATGCG CTGGGCGC ACCACAATAC chr3L:1166058-1166178 73 4.29e-06 GGCTGAGACG CTGGGCGC AACTGCGGCT chr2R:11754720-11754840 93 4.29e-06 TAGCGCTCGA CTGGGCGC CGATGGATAT chr3L:1406211-1406331 6 1.06e-05 CCTGA TTGGGCGC ACACAGTCGC chr2L:2144638-2144758 99 1.06e-05 GTGCGAGTGT TTGGGCGC GTGTGCATAT chr3L:13488470-13488590 108 1.90e-05 AAGCGGATTC CTGGCCGC GAACA chr2L:12252794-12252914 34 1.90e-05 AACACAAACA CTCGGCGC TGTGCGAAAC chr2L:4791537-4791657 58 2.34e-05 CACTCTTTCA CTGGGGGC GTTGCTGTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:10081612-10081732 4.3e-06 59_[+5]_53 chr3R:23384958-23385078 4.3e-06 99_[+5]_13 chr3L:1166058-1166178 4.3e-06 72_[+5]_40 chr2R:11754720-11754840 4.3e-06 92_[+5]_20 chr3L:1406211-1406331 1.1e-05 5_[+5]_107 chr2L:2144638-2144758 1.1e-05 98_[+5]_14 chr3L:13488470-13488590 1.9e-05 107_[+5]_5 chr2L:12252794-12252914 1.9e-05 33_[+5]_79 chr2L:4791537-4791657 2.3e-05 57_[+5]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGGGCGC width=8 seqs=9 chr3R:10081612-10081732 ( 60) CTGGGCGC 1 chr3R:23384958-23385078 ( 100) CTGGGCGC 1 chr3L:1166058-1166178 ( 73) CTGGGCGC 1 chr2R:11754720-11754840 ( 93) CTGGGCGC 1 chr3L:1406211-1406331 ( 6) TTGGGCGC 1 chr2L:2144638-2144758 ( 99) TTGGGCGC 1 chr3L:13488470-13488590 ( 108) CTGGCCGC 1 chr2L:12252794-12252914 ( 34) CTCGGCGC 1 chr2L:4791537-4791657 ( 58) CTGGGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.4638 E= 1.7e+003 -982 194 -982 -41 -982 -982 -982 176 -982 -86 212 -982 -982 -982 229 -982 -982 -86 212 -982 -982 214 -88 -982 -982 -982 229 -982 -982 231 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 1.7e+003 0.000000 0.777778 0.000000 0.222222 0.000000 0.000000 0.000000 1.000000 0.000000 0.111111 0.888889 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.111111 0.888889 0.000000 0.000000 0.888889 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGCGC MEME-5 regular expression -------------------------------------------------------------------------------- [CT]TGGGCGC -------------------------------------------------------------------------------- Time 30.67 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:226890-227010 2.01e-04 65_[+1(4.96e-05)]_15_[+2(1.95e-05)]_\ 24 chr3L:21285057-21285177 1.20e-02 120 chr2L:20998927-20999047 5.27e-02 86_[+1(1.81e-05)]_26 chrX:17503707-17503827 2.60e-03 91_[+1(8.94e-05)]_21 chr2L:11423962-11424082 4.13e-02 120 chr2L:19440425-19440545 4.86e-02 64_[+2(1.95e-05)]_48 chr2R:24082201-24082321 2.61e-04 9_[+4(5.37e-05)]_83_[+3(6.79e-05)]_\ 12 chr3R:19024900-19025020 3.73e-01 120 chr3L:4501545-4501665 1.31e-01 120 chr3L:21284200-21284320 9.35e-02 120 chr2L:7580150-7580270 6.28e-02 44_[+3(6.79e-05)]_68 chrX:16004928-16005048 1.44e-01 120 chr2L:19229993-19230113 3.78e-03 70_[+4(4.07e-05)]_42 chr2R:8053121-8053241 1.35e-03 100_[+1(1.81e-05)]_12 chr3L:16055268-16055388 2.41e-03 102_[+1(1.81e-05)]_10 chr2L:7332917-7333037 7.45e-01 120 chr2L:19218052-19218172 9.25e-01 120 chr2R:10441423-10441543 6.78e-03 67_[+1(1.81e-05)]_45 chr2R:6197452-6197572 3.41e-03 34_[+1(9.07e-06)]_45_[+1(9.07e-06)]_\ 25 chrX:4555732-4555852 1.86e-03 66_[+4(4.07e-05)]_3_[+1(1.81e-05)]_\ 35 chr3L:5573219-5573339 4.59e-02 120 chrX:16774636-16774756 2.47e-02 13_[+1(2.73e-05)]_99 chr2L:18330420-18330540 2.30e-03 53_[+3(4.82e-05)]_59 chr2L:12252794-12252914 5.44e-03 4_[+5(9.42e-05)]_21_[+5(1.90e-05)]_\ 79 chr4:1054532-1054652 9.92e-03 64_[+1(8.94e-05)]_48 chr3R:17395549-17395669 1.79e-01 120 chrX:17353849-17353969 2.42e-03 73_[+4(7.27e-05)]_27_[+4(1.30e-05)]_\ 4 chr2L:6816520-6816640 8.56e-02 120 chr2R:21602899-21603019 9.27e-01 120 chrX:16774836-16774956 6.55e-01 120 chr2R:14138131-14138251 1.42e-01 120 chr3R:8724071-8724191 2.12e-01 120 chr3L:3316580-3316700 7.59e-01 120 chr3L:15694556-15694676 2.95e-02 120 chr3R:15409990-15410110 1.38e-03 36_[+1(9.07e-06)]_76 chr2L:2144638-2144758 4.70e-05 59_[+2(1.95e-05)]_31_[+5(1.06e-05)]_\ 14 chr3L:25121323-25121443 2.14e-01 120 chr3R:21189631-21189751 3.38e-02 120 chr3R:11958061-11958181 1.39e-03 66_[+2(1.95e-05)]_46 chr3L:23555450-23555570 3.10e-01 120 chr2R:10868998-10869118 1.45e-01 120 chr3R:15688569-15688689 1.19e-04 30_[+5(3.57e-05)]_22_[+4(7.27e-05)]_\ 15_[+2(3.92e-05)]_29 chr3L:15291259-15291379 1.15e-01 120 chr3L:10249939-10250059 2.65e-03 120 chr3R:14279475-14279595 1.64e-02 120 chrX:16458694-16458814 1.41e-02 31_[+1(1.81e-05)]_81 chr3L:2765154-2765274 3.56e-04 87_[+1(1.81e-05)]_25 chr3R:19319589-19319709 2.86e-02 43_[+3(6.79e-05)]_69 chr2R:23726466-23726586 5.15e-02 120 chr2L:10260510-10260630 4.62e-03 69_[+2(1.95e-05)]_43 chr3L:21465833-21465953 6.69e-01 120 chr2L:22139901-22140021 1.18e-01 120 chr3R:6460897-6461017 5.26e-03 52_[+2(3.92e-05)]_60 chr3L:13210379-13210499 4.94e-03 50_[+3(1.95e-05)]_62 chr2L:5484071-5484191 9.48e-03 120 chr2L:15506915-15507035 1.13e-02 93_[+1(7.61e-05)]_19 chr3L:21465630-21465750 2.74e-02 2_[+1(9.07e-06)]_110 chr2L:1562869-1562989 1.06e-04 80_[+4(1.30e-05)]_3_[+1(1.81e-05)]_\ 21 chr2L:11473135-11473255 1.37e-01 120 chr3L:18748092-18748212 1.07e-01 120 chrX:20466645-20466765 1.43e-01 92_[+1(7.61e-05)]_20 chr3R:22163538-22163658 6.35e-02 120 chr3L:10373450-10373570 4.39e-04 24_[+2(1.95e-05)]_57_[+1(7.61e-05)]_\ 23 chr3L:17630847-17630967 1.23e-01 120 chr3R:7093736-7093856 2.36e-01 120 chr3L:14184438-14184558 6.66e-04 42_[+1(4.96e-05)]_70 chr3R:12998368-12998488 1.33e-01 120 chr4:1056446-1056566 8.81e-01 120 chr2R:11754720-11754840 1.52e-03 53_[+1(6.30e-05)]_31_[+5(4.29e-06)]_\ 20 chr2L:9684123-9684243 3.25e-01 120 chr2R:21195948-21196068 8.30e-04 95_[+2(3.92e-05)]_17 chr2L:5786815-5786935 4.08e-02 120 chr3L:8576588-8576708 8.11e-03 45_[+3(1.95e-05)]_67 chr3L:1166058-1166178 1.94e-05 35_[+3(4.82e-05)]_29_[+5(4.29e-06)]_\ 40 chr3L:19240540-19240660 6.87e-02 9_[+3(6.79e-05)]_103 chrX:1903722-1903842 8.32e-01 120 chr3R:9049350-9049470 6.15e-02 120 chr2R:13789212-13789332 9.40e-02 120 chr2L:6205053-6205173 1.14e-01 65_[+1(8.94e-05)]_47 chr3R:5271006-5271126 4.71e-03 60_[+3(4.82e-05)]_52 chr2R:11656143-11656263 1.42e-02 66_[+2(5.26e-05)]_46 chr4:1063552-1063672 6.38e-03 61_[+2(3.92e-05)]_6_[+1(8.94e-05)]_\ 37 chr3L:22154391-22154511 1.03e-02 81_[+1(7.61e-05)]_31 chrX:16062881-16063001 3.33e-02 120 chr3R:9130351-9130471 9.05e-02 120 chr3L:15030457-15030577 1.71e-01 120 chr3R:13699459-13699579 2.99e-02 120 chrX:390680-390800 4.03e-02 120 chrX:1773587-1773707 1.19e-01 120 chr2L:12700672-12700792 3.70e-02 120 chr3R:4684909-4685029 2.77e-03 18_[+2(1.95e-05)]_94 chrX:8684581-8684701 7.50e-03 70_[+1(1.81e-05)]_42 chr4:56877-56997 2.79e-01 120 chr3R:17947435-17947555 6.37e-02 120 chrX:7616415-7616535 4.47e-03 120 chr2L:12341814-12341934 5.84e-02 120 chr3R:18244238-18244358 5.98e-04 33_[+1(2.73e-05)]_79 chr2L:16501449-16501569 3.04e-02 18_[+1(9.07e-06)]_94 chr3L:14291315-14291435 6.24e-03 41_[+4(1.30e-05)]_71 chr2L:21873809-21873929 1.22e-04 4_[+1(9.07e-06)]_108 chr3R:11640346-11640466 3.47e-03 64_[+1(1.81e-05)]_48 chr2L:4821922-4822042 7.48e-03 64_[+3(4.82e-05)]_48 chr3R:19875700-19875820 6.57e-03 120 chr2L:5186655-5186775 1.07e-03 18_[+1(9.07e-06)]_94 chr3L:14303382-14303502 1.38e-03 66_[+1(1.81e-05)]_46 chr3L:12590111-12590231 1.33e-03 31_[+1(2.73e-05)]_3_[+3(9.63e-05)]_\ 70 chr3L:469844-469964 1.60e-03 28_[+1(9.07e-06)]_3_[+3(6.79e-05)]_\ 73 chr2L:10341448-10341568 6.13e-01 120 chr3R:6482067-6482187 3.32e-03 23_[+1(9.07e-06)]_89 chr4:976728-976848 3.15e-05 32_[+1(4.96e-05)]_15_[+2(1.95e-05)]_\ 57 chr2R:8650238-8650358 3.84e-02 120 chr2R:23869590-23869710 9.69e-02 120 chr3R:14477621-14477741 1.55e-03 17_[+3(9.63e-05)]_40_[+1(4.96e-05)]_\ 47 chr3L:19704384-19704504 6.32e-02 120 chr3R:14744543-14744663 1.86e-02 112_[+1(8.94e-05)] chr3R:24520908-24521028 6.14e-01 120 chr3R:24659312-24659432 1.98e-01 120 chrX:17519558-17519678 1.21e-02 34_[+1(6.30e-05)]_3_[+3(6.79e-05)]_\ 67 chr2L:16457346-16457466 3.98e-04 65_[+1(1.81e-05)]_47 chr3R:6658676-6658796 6.37e-02 38_[+1(2.73e-05)]_74 chr2L:13584540-13584660 2.71e-04 51_[+3(4.82e-05)]_61 chrX:7591051-7591171 9.00e-04 13_[+3(4.82e-05)]_65_[+4(1.30e-05)]_\ 26 chr3L:1145183-1145303 2.49e-02 72_[+4(4.07e-05)]_40 chrX:13222300-13222420 5.73e-02 39_[+1(6.30e-05)]_73 chr2L:19373193-19373313 1.13e-01 120 chr2R:5421073-5421193 2.56e-02 67_[+2(3.92e-05)]_45 chr2L:14011744-14011864 2.47e-02 50_[+3(4.82e-05)]_62 chr3R:19093434-19093554 2.70e-02 91_[+4(1.30e-05)]_21 chr2L:22924654-22924774 8.66e-03 74_[+2(1.95e-05)]_38 chr2R:6611051-6611171 9.67e-02 120 chr3R:23384958-23385078 1.91e-03 99_[+5(4.29e-06)]_13 chrX:12547728-12547848 1.09e-01 120 chr3R:12995585-12995705 3.58e-01 120 chr3L:21497523-21497643 1.16e-01 120 chr3L:2433974-2434094 1.61e-03 43_[+3(1.95e-05)]_69 chr3L:6314567-6314687 7.67e-02 120 chr2R:18585271-18585391 4.75e-01 120 chr3L:24537718-24537838 7.24e-02 120 chr2R:6665934-6666054 1.24e-02 26_[+2(1.95e-05)]_86 chrX:2905235-2905355 1.05e-02 120 chrX:18881193-18881313 4.74e-01 120 chr3R:10081612-10081732 2.84e-05 13_[+1(4.96e-05)]_38_[+5(4.29e-06)]_\ 53 chr3L:17402538-17402658 2.17e-03 33_[+1(6.30e-05)]_79 chr3R:24521423-24521543 1.08e-02 65_[+1(7.61e-05)]_47 chr3L:13488470-13488590 2.86e-02 107_[+5(1.90e-05)]_5 chr2R:5993190-5993310 4.81e-04 39_[+1(1.81e-05)]_60_[+3(9.63e-05)]_\ 5 chr2L:10590804-10590924 2.71e-02 120 chr2R:8759656-8759776 6.99e-02 120 chr3L:17404685-17404805 1.16e-02 25_[+1(2.73e-05)]_87 chrX:4485919-4486039 5.15e-02 120 chrX:6706661-6706781 4.14e-01 120 chr2R:2846274-2846394 5.37e-01 120 chr2L:23313603-23313723 1.01e-01 120 chrX:5964206-5964326 1.14e-01 31_[+4(7.27e-05)]_81 chr3L:15329428-15329548 2.57e-01 120 chr2L:8736543-8736663 2.51e-01 120 chr3R:4998629-4998749 3.99e-03 41_[+1(9.07e-06)]_71 chr3L:19338405-19338525 9.79e-01 120 chr2R:14438334-14438454 2.09e-01 120 chr3R:31683900-31684020 3.55e-02 120 chr2R:23977864-23977984 3.14e-01 120 chr2L:5092223-5092343 6.26e-03 82_[+4(4.07e-05)]_30 chr2L:14159579-14159699 1.75e-02 120 chr2L:7516169-7516289 3.73e-03 71_[+2(5.26e-05)]_41 chrX:2125828-2125948 1.07e-01 48_[+1(6.30e-05)]_64 chrX:19606974-19607094 1.03e-03 56_[+1(2.73e-05)]_56 chr3L:5575681-5575801 1.25e-03 100_[+4(4.07e-05)]_12 chr2L:5224876-5224996 1.41e-01 120 chr3R:11193871-11193991 1.18e-02 120 chrX:19667625-19667745 6.57e-03 8_[+4(4.07e-05)]_104 chr3L:20585784-20585904 2.04e-04 33_[+3(1.95e-05)]_37_[+4(4.07e-05)]_\ 34 chr3R:26892921-26893041 6.17e-01 120 chr3R:10709440-10709560 2.75e-01 120 chr3L:20949708-20949828 4.49e-01 120 chr4:421177-421297 6.32e-04 24_[+1(4.96e-05)]_15_[+2(1.95e-05)]_\ 65 chr3L:15229871-15229991 3.12e-02 82_[+1(3.64e-05)]_30 chr2R:6163162-6163282 4.85e-01 120 chr2R:14073622-14073742 1.04e-02 70_[+3(4.82e-05)]_42 chr2R:10103179-10103299 5.35e-03 93_[+1(1.81e-05)]_19 chr2R:21886409-21886529 1.19e-01 120 chrX:17110674-17110794 1.05e-01 120 chr2L:5782014-5782134 7.44e-02 120 chr3L:1742274-1742394 1.64e-01 120 chr2L:11482775-11482895 3.98e-03 51_[+1(2.73e-05)]_61 chr2R:5126423-5126543 7.55e-04 45_[+1(4.96e-05)]_15_[+2(1.95e-05)]_\ 44 chr3R:29372615-29372735 1.63e-01 120 chr3L:18139173-18139293 5.21e-02 120 chr2L:6749598-6749718 1.14e-03 103_[+3(1.95e-05)]_9 chr3L:22680996-22681116 2.73e-02 16_[+3(1.95e-05)]_96 chrX:14923811-14923931 2.43e-04 107_[+1(1.81e-05)]_5 chr2L:10940764-10940884 1.82e-03 55_[+4(4.07e-05)]_3_[+1(7.61e-05)]_\ 46 chr3L:23081362-23081482 7.58e-03 50_[+2(1.95e-05)]_62 chr3R:21606893-21607013 1.45e-02 120 chr2L:5300424-5300544 2.42e-01 120 chr3L:27262779-27262899 2.69e-01 120 chr3L:506962-507082 2.22e-03 38_[+1(6.30e-05)]_74 chr2L:3823979-3824099 2.87e-02 61_[+1(9.07e-06)]_51 chr3L:11554912-11555032 6.08e-02 75_[+4(5.37e-05)]_37 chr3R:29621186-29621306 1.03e-03 82_[+4(1.30e-05)]_30 chr3R:17880357-17880477 1.72e-05 38_[+1(9.07e-06)]_3_[+3(6.79e-05)]_\ 63 chr3L:13946800-13946920 8.46e-02 120 chr2L:10339610-10339730 2.05e-04 51_[+4(5.37e-05)]_61 chr2L:4886875-4886995 2.52e-02 25_[+1(9.07e-06)]_87 chr3L:490419-490539 6.13e-02 120 chr3L:1406211-1406331 4.26e-04 5_[+5(1.06e-05)]_107 chr2R:13438367-13438487 9.86e-02 120 chr3R:16319679-16319799 7.70e-03 50_[+3(4.82e-05)]_62 chr2L:21077971-21078091 1.69e-02 120 chr3L:17408181-17408301 1.95e-02 120 chr3L:1367191-1367311 4.86e-02 31_[+1(1.81e-05)]_81 chr3R:3790423-3790543 8.82e-03 108_[+2(3.92e-05)]_4 chr3L:329320-329440 1.59e-01 45_[+3(9.63e-05)]_67 chr2R:13561097-13561217 1.04e-01 120 chr3L:21274110-21274230 1.98e-01 39_[+3(4.82e-05)]_73 chr2R:5496138-5496258 5.25e-01 120 chrX:17726015-17726135 2.94e-02 98_[+4(5.37e-05)]_14 chr3R:6760999-6761119 1.10e-03 38_[+3(4.82e-05)]_13_[+1(1.81e-05)]_\ 53 chrX:10899280-10899400 5.07e-01 120 chr3R:4518501-4518621 2.59e-03 46_[+2(3.92e-05)]_6_[+1(3.64e-05)]_\ 52 chrX:15077105-15077225 7.93e-01 120 chr2R:14267621-14267741 7.87e-03 74_[+1(1.81e-05)]_38 chr3R:23220739-23220859 5.46e-01 120 chr3L:4429006-4429126 1.63e-04 77_[+1(3.64e-05)]_35 chrX:7202552-7202672 4.79e-01 120 chr2L:10428666-10428786 2.16e-02 75_[+1(1.81e-05)]_37 chr3R:15139663-15139783 7.37e-01 120 chrX:19306796-19306916 1.90e-02 62_[+4(7.27e-05)]_50 chr3L:631951-632071 9.99e-03 23_[+1(4.96e-05)]_89 chr3L:7868999-7869119 1.33e-03 [+2(1.95e-05)]_86_[+2(5.26e-05)]_18 chr2R:13846226-13846346 3.43e-02 120 chr3L:23097187-23097307 4.76e-01 120 chr3L:18748291-18748411 3.10e-01 120 chr2L:7559484-7559604 1.82e-02 120 chr2L:18390116-18390236 1.07e-01 120 chr2R:13611599-13611719 4.19e-02 120 chr2L:3570755-3570875 6.06e-01 120 chr3L:27279966-27280086 2.98e-03 64_[+2(3.92e-05)]_6_[+1(8.94e-05)]_\ 34 chrX:13237548-13237668 1.57e-01 120 chr2R:9711537-9711657 4.43e-01 120 chr3R:4831813-4831933 3.12e-01 120 chr2L:23313804-23313924 2.54e-01 120 chr2R:10783037-10783157 2.37e-02 93_[+3(9.63e-05)]_19 chr3L:22495222-22495342 6.28e-01 120 chr4:1063754-1063874 4.98e-01 120 chr3L:818870-818990 5.09e-04 23_[+1(9.07e-06)]_89 chrX:16965122-16965242 1.22e-01 120 chr3L:4708212-4708332 1.19e-02 23_[+1(2.73e-05)]_89 chr3L:14160986-14161106 8.45e-02 120 chr2L:4791537-4791657 1.01e-03 21_[+1(2.73e-05)]_28_[+5(2.34e-05)]_\ 55 chrX:21281610-21281730 3.05e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n11.farnam.hpc.yale.internal ********************************************************************************