******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG7928.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2L:7013223-7013343 1.0000 120 chrX:336765-336885 1.0000 120 chr2R:22895767-22895887 1.0000 120 chrX:6687417-6687537 1.0000 120 chr2L:11086526-11086646 1.0000 120 chr3R:29202567-29202687 1.0000 120 chr2R:22420962-22421082 1.0000 120 chr2R:7931004-7931124 1.0000 120 chr2L:9089686-9089806 1.0000 120 chr3R:7643669-7643789 1.0000 120 chrX:22471991-22472111 1.0000 120 chrX:15701179-15701299 1.0000 120 chr2L:560336-560456 1.0000 120 chr3R:30583679-30583799 1.0000 120 chr2L:6448484-6448604 1.0000 120 chrX:1901885-1902005 1.0000 120 chr2R:17140882-17141002 1.0000 120 chr2R:24668304-24668424 1.0000 120 chr3R:22492921-22493041 1.0000 120 chr3R:15249847-15249967 1.0000 120 chr3L:1313039-1313159 1.0000 120 chrX:658181-658301 1.0000 120 chr3R:18980883-18981003 1.0000 120 chr3L:13997127-13997247 1.0000 120 chr3R:27283731-27283851 1.0000 120 chr3L:6994595-6994715 1.0000 120 chr3L:8966733-8966853 1.0000 120 chr3L:13040983-13041103 1.0000 120 chrX:10621777-10621897 1.0000 120 chr2R:24661430-24661550 1.0000 120 chr2L:10976348-10976468 1.0000 120 chr2L:11100849-11100969 1.0000 120 chr2L:4385992-4386112 1.0000 120 chrX:9085816-9085936 1.0000 120 chr2R:12423498-12423618 1.0000 120 chr2R:22874604-22874724 1.0000 120 chrX:18479764-18479884 1.0000 120 chr3L:16595040-16595160 1.0000 120 chr3L:19646454-19646574 1.0000 120 chr2R:12201114-12201234 1.0000 120 chr3R:22753069-22753189 1.0000 120 chr2R:23851049-23851169 1.0000 120 chr2R:7791320-7791440 1.0000 120 chr3R:17733501-17733621 1.0000 120 chr3L:7094204-7094324 1.0000 120 chrX:7735523-7735643 1.0000 120 chr3L:4406068-4406188 1.0000 120 chr3L:15509517-15509637 1.0000 120 chr2L:6723810-6723930 1.0000 120 chr3R:19044771-19044891 1.0000 120 chr2L:19064857-19064977 1.0000 120 chr3R:19229343-19229463 1.0000 120 chr3L:6943752-6943872 1.0000 120 chr3R:17687021-17687141 1.0000 120 chr3R:20551510-20551630 1.0000 120 chr3L:11836831-11836951 1.0000 120 chr2L:4382671-4382791 1.0000 120 chr2L:13549599-13549719 1.0000 120 chrX:16422210-16422330 1.0000 120 chr2R:17737199-17737319 1.0000 120 chr3R:7644562-7644682 1.0000 120 chr2R:24664346-24664466 1.0000 120 chrX:16786978-16787098 1.0000 120 chr2R:16017096-16017216 1.0000 120 chr3R:6149712-6149832 1.0000 120 chr2L:13367515-13367635 1.0000 120 chr3L:11623724-11623844 1.0000 120 chr3R:17807358-17807478 1.0000 120 chrX:16598516-16598636 1.0000 120 chrX:6039575-6039695 1.0000 120 chrX:644634-644754 1.0000 120 chr2L:1728681-1728801 1.0000 120 chr2R:15340362-15340482 1.0000 120 chr2L:21104472-21104592 1.0000 120 chr3L:4286957-4287077 1.0000 120 chrX:15697386-15697506 1.0000 120 chrX:684778-684898 1.0000 120 chrX:6533890-6534010 1.0000 120 chr3R:13382714-13382834 1.0000 120 chr2R:7463416-7463536 1.0000 120 chrX:19579252-19579372 1.0000 120 chr2L:6920245-6920365 1.0000 120 chr3L:8956738-8956858 1.0000 120 chr3R:14879347-14879467 1.0000 120 chrX:19762329-19762449 1.0000 120 chr2R:18094669-18094789 1.0000 120 chr3L:16613052-16613172 1.0000 120 chrX:16598719-16598839 1.0000 120 chr2L:8685962-8686082 1.0000 120 chr3R:26876576-26876696 1.0000 120 chr2R:13239450-13239570 1.0000 120 chr2R:24561015-24561135 1.0000 120 chr2R:16640851-16640971 1.0000 120 chr3R:28696120-28696240 1.0000 120 chrX:5876785-5876905 1.0000 120 chr3L:9679081-9679201 1.0000 120 chr2L:9699682-9699802 1.0000 120 chr4:253300-253420 1.0000 120 chr2L:17590046-17590166 1.0000 120 chr2L:12712393-12712513 1.0000 120 chrX:11579009-11579129 1.0000 120 chrX:15785513-15785633 1.0000 120 chr2L:1752061-1752181 1.0000 120 chr3L:8109040-8109160 1.0000 120 chr2L:21154030-21154150 1.0000 120 chr3L:3435112-3435232 1.0000 120 chrX:13612019-13612139 1.0000 120 chr2R:12279256-12279376 1.0000 120 chr2R:5663201-5663321 1.0000 120 chr2L:23512807-23512927 1.0000 120 chr3R:12972269-12972389 1.0000 120 chr3L:247461-247581 1.0000 120 chrX:644083-644203 1.0000 120 chrX:2052122-2052242 1.0000 120 chr3R:31220600-31220720 1.0000 120 chrX:15450166-15450286 1.0000 120 chr2R:24574269-24574389 1.0000 120 chr2R:24668507-24668627 1.0000 120 chrX:9106550-9106670 1.0000 120 chr2L:9963855-9963975 1.0000 120 chr3R:17040582-17040702 1.0000 120 chr2R:25190573-25190693 1.0000 120 chrX:18367856-18367976 1.0000 120 chr3R:13710781-13710901 1.0000 120 chrX:2172443-2172563 1.0000 120 chr3R:18667798-18667918 1.0000 120 chrX:8407220-8407340 1.0000 120 chrX:22482307-22482427 1.0000 120 chr2R:24197712-24197832 1.0000 120 chrX:18479970-18480090 1.0000 120 chrX:23005200-23005320 1.0000 120 chrX:10854888-10855008 1.0000 120 chrX:18137052-18137172 1.0000 120 chrX:3965266-3965386 1.0000 120 chrX:12497001-12497121 1.0000 120 chr2L:271705-271825 1.0000 120 chr2R:9865578-9865698 1.0000 120 chr3R:9334650-9334770 1.0000 120 chr2L:7810699-7810819 1.0000 120 chr3R:18167690-18167810 1.0000 120 chr2R:8333731-8333851 1.0000 120 chr3L:17847015-17847135 1.0000 120 chr2R:24779845-24779965 1.0000 120 chrX:7300403-7300523 1.0000 120 chrX:13370935-13371055 1.0000 120 chr3R:28544753-28544873 1.0000 120 chrX:16426581-16426701 1.0000 120 chr2R:7539676-7539796 1.0000 120 chr3L:18869621-18869741 1.0000 120 chr3R:26245820-26245940 1.0000 120 chr3R:21822662-21822782 1.0000 120 chr3R:15857609-15857729 1.0000 120 chr2R:17548649-17548769 1.0000 120 chr3R:19632987-19633107 1.0000 120 chr2R:17792473-17792593 1.0000 120 chr3L:17804675-17804795 1.0000 120 chr2L:13813726-13813846 1.0000 120 chr2R:18426345-18426465 1.0000 120 chr2L:16679999-16680119 1.0000 120 chrX:20433272-20433392 1.0000 120 chr3L:16595241-16595361 1.0000 120 chr2L:9437274-9437394 1.0000 120 chr3R:22491543-22491663 1.0000 120 chr2L:18766381-18766501 1.0000 120 chr2R:22885990-22886110 1.0000 120 chr2L:5325020-5325140 1.0000 120 chr2L:15248438-15248558 1.0000 120 chr3L:7320006-7320126 1.0000 120 chr3L:7604887-7605007 1.0000 120 chr3R:9335116-9335236 1.0000 120 chr2L:10321133-10321253 1.0000 120 chrX:13154912-13155032 1.0000 120 chrX:4139214-4139334 1.0000 120 chr2R:16221782-16221902 1.0000 120 chr2R:18094876-18094996 1.0000 120 chr2L:8686168-8686288 1.0000 120 chr3L:4169973-4170093 1.0000 120 chrX:21035365-21035485 1.0000 120 chr2R:14503850-14503970 1.0000 120 chr3R:26945369-26945489 1.0000 120 chr2R:10468525-10468645 1.0000 120 chr3L:11214420-11214540 1.0000 120 chr2R:23988449-23988569 1.0000 120 chr2L:1177597-1177717 1.0000 120 chr2R:20308603-20308723 1.0000 120 chr2R:7541274-7541394 1.0000 120 chr2R:10886708-10886828 1.0000 120 chr3R:31743386-31743506 1.0000 120 chr3R:19939111-19939231 1.0000 120 chr3R:18166499-18166619 1.0000 120 chr2R:24976081-24976201 1.0000 120 chr2L:10333753-10333873 1.0000 120 chr2L:4310542-4310662 1.0000 120 chr3L:11822210-11822330 1.0000 120 chr3R:13676592-13676712 1.0000 120 chr2R:14258941-14259061 1.0000 120 chr2R:22420344-22420464 1.0000 120 chr2L:10263521-10263641 1.0000 120 chr2L:8718521-8718641 1.0000 120 chr2R:10885145-10885265 1.0000 120 chr2R:16608770-16608890 1.0000 120 chr2L:10976597-10976717 1.0000 120 chrX:18385214-18385334 1.0000 120 chr2R:24687377-24687497 1.0000 120 chrX:14841983-14842103 1.0000 120 chrX:1349418-1349538 1.0000 120 chr2R:21073663-21073783 1.0000 120 chrX:7678933-7679053 1.0000 120 chr2R:13224581-13224701 1.0000 120 chr3L:3219019-3219139 1.0000 120 chr2R:24574479-24574599 1.0000 120 chr3R:30394396-30394516 1.0000 120 chr3L:9838644-9838764 1.0000 120 chr2L:5037376-5037496 1.0000 120 chr3R:19094896-19095016 1.0000 120 chr3R:10121667-10121787 1.0000 120 chr3R:11822451-11822571 1.0000 120 chrX:22472192-22472312 1.0000 120 chr3R:25851260-25851380 1.0000 120 chr3R:31221151-31221271 1.0000 120 chr3R:28897452-28897572 1.0000 120 chr3L:1318315-1318435 1.0000 120 chr3L:16602969-16603089 1.0000 120 chr2L:10970342-10970462 1.0000 120 chr2L:564051-564171 1.0000 120 chr3R:12422711-12422831 1.0000 120 chr3R:13218881-13219001 1.0000 120 chr2R:21323970-21324090 1.0000 120 chr2R:19129531-19129651 1.0000 120 chr3R:8264404-8264524 1.0000 120 chr2R:24187562-24187682 1.0000 120 chr2L:3862607-3862727 1.0000 120 chr3R:16476632-16476752 1.0000 120 chr3L:14002025-14002145 1.0000 120 chr2R:20308805-20308925 1.0000 120 chr3R:13011285-13011405 1.0000 120 chrX:12749982-12750102 1.0000 120 chrX:19268832-19268952 1.0000 120 chr3L:21770324-21770444 1.0000 120 chr2L:12473765-12473885 1.0000 120 chr3L:9972640-9972760 1.0000 120 chr3R:29858927-29859047 1.0000 120 chr2R:9692124-9692244 1.0000 120 chr4:980031-980151 1.0000 120 chr3R:27954079-27954199 1.0000 120 chr3R:14711600-14711720 1.0000 120 chr3L:2237179-2237299 1.0000 120 chr2R:16180198-16180318 1.0000 120 chr3R:27958122-27958242 1.0000 120 chr2R:10075598-10075718 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG7928/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG7928.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.29 C 0.208 G 0.213 T 0.288 Background letter frequencies (from file dataset with add-one prior applied): A 0.29 C 0.208 G 0.213 T 0.288 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CAGSSCTG MEME-1 width = 8 sites = 214 llr = 1619 E-value = 1.2e-192 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :a1::1:1 pos.-specific C 8::559:: probability G 1:845::9 matrix T 1:1:::a1 bits 2.3 2.0 1.8 * 1.6 * ** Relative 1.4 ** *** Entropy 1.1 ******** (10.9 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CAGCCCTG consensus GG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:16180198-16180318 45 7.09e-06 gtgtTCGTTG CAGCCCTG GTCTATGCCC chr4:980031-980151 68 7.09e-06 GAAATTTTAG CAGCCCTG GTTTGCGTTC chrX:19268832-19268952 40 7.09e-06 GATGGCGATG CAGCCCTG GCTGCACTGG chr2R:19129531-19129651 62 7.09e-06 GGTGGTTGTG CAGCCCTG CATCGCGTTG chr3R:12422711-12422831 65 7.09e-06 TTGCAGCACG CAGCCCTG GCTTCAAGGG chr3L:16602969-16603089 108 7.09e-06 AACGCGCCTC CAGCCCTG GTCTC chr3R:31221151-31221271 66 7.09e-06 GCTGAAATTG CAGCCCTG GAAATGGACG chrX:14841983-14842103 42 7.09e-06 ATCTATTGTG CAGCCCTG GGGCCGGAAG chr3R:13676592-13676712 56 7.09e-06 AGTGCTCGTG CAGCCCTG GTTGCCCGCG chr3R:31743386-31743506 45 7.09e-06 GATAGGTTGG CAGCCCTG GTTTGGGCTC chr2R:10886708-10886828 80 7.09e-06 AATTGTTAGC CAGCCCTG CCGAGCAAAA chr2R:7541274-7541394 70 7.09e-06 TTTATTTGCC CAGCCCTG GGCTTTCGAG chr2R:14503850-14503970 59 7.09e-06 CGATAGTTGG CAGCCCTG GTGCGGGAGC chr3L:7604887-7605007 37 7.09e-06 GCTGCTTGTG CAGCCCTG GCGCCTAACA chr2L:5325020-5325140 43 7.09e-06 CGAGAGTTTG CAGCCCTG GTTTACGACA chr3R:15857609-15857729 93 7.09e-06 CGCTAGCTTT CAGCCCTG GTTTTCAGCT chr3L:17847015-17847135 64 7.09e-06 TGCACATCGC CAGCCCTG CGACCGCTCC chr2R:8333731-8333851 56 7.09e-06 TTTTACGCCC CAGCCCTG GTTTACCAGG chr3R:18167690-18167810 59 7.09e-06 CGCACGCCTG CAGCCCTG GTAACTCTAT chrX:12497001-12497121 85 7.09e-06 GCACTGTCGC CAGCCCTG GAACATACCA chrX:23005200-23005320 64 7.09e-06 AAACATATTT CAGCCCTG AAAATATTAT chr3R:18667798-18667918 66 7.09e-06 TGCGATAGTT CAGCCCTG GCAACCAGCT chr3R:13710781-13710901 58 7.09e-06 CCGCAACCTG CAGCCCTG GCCTCAACAG chr2R:24574269-24574389 12 7.09e-06 TCTCTAATTG CAGCCCTG GCTCGACAAC chr3R:31220600-31220720 79 7.09e-06 GAATGCAGTG CAGCCCTG GTACGTGCAA chr2R:5663201-5663321 70 7.09e-06 ATTTTCGTGG CAGCCCTG GATTAAAATT chr2L:21154030-21154150 53 7.09e-06 CAACACTTTC CAGCCCTG GAAAAATACC chr3L:8109040-8109160 70 7.09e-06 GAACTCAATT CAGCCCTG AAATGGAAAG chr2R:24561015-24561135 52 7.09e-06 ACATTTTCTT CAGCCCTG AGTTGAGTCT chrX:19762329-19762449 49 7.09e-06 CTCGTCGATG CAGCCCTG GTCAATTCGT chr3L:8956738-8956858 62 7.09e-06 ATGTTGAATG CAGCCCTG GCTGTTTATC chr2R:7463416-7463536 80 7.09e-06 GAGCACCTGC CAGCCCTG GAAATCAGCT chr3L:4286957-4287077 68 7.09e-06 TTCAGTGTCG CAGCCCTG GTAAGTTCCG chr2L:13367515-13367635 67 7.09e-06 TTTTATACAC CAGCCCTG GTTTATCTGG chr3R:6149712-6149832 37 7.09e-06 TGTGGGCTGG CAGCCCTG GAGAAAGTCC chr2R:24664346-24664466 71 7.09e-06 TACGTCTCAG CAGCCCTG GATCTAAATC chr3L:6943752-6943872 65 7.09e-06 AGTGCTGCTG CAGCCCTG GTCAGAAAAA chr3L:15509517-15509637 81 7.09e-06 CTGCAGTTTG CAGCCCTG GCGCTCAGCT chr3R:17733501-17733621 81 7.09e-06 GTGCAGTCGT CAGCCCTG GCGAACAGCT chr2R:7791320-7791440 47 7.09e-06 CCGCTCTTTG CAGCCCTG GTTGATGCTA chr2R:22874604-22874724 107 7.09e-06 CACACCCTTC CAGCCCTG CCGACC chr2R:12423498-12423618 72 7.09e-06 TTGTTGTTTC CAGCCCTG GTTTGGGAAA chr3L:13040983-13041103 71 7.09e-06 GCGCACAATG CAGCCCTG GCAATTATGG chr3R:15249847-15249967 35 7.09e-06 ATGTTTGGCT CAGCCCTG GAACCGGTTC chr2L:9089686-9089806 109 7.09e-06 GCTCTGTATT CAGCCCTG AACC chr2R:10075598-10075718 31 2.91e-05 CCAGAGTGAC CAGGGCTG CACCTTACAA chr3R:13011285-13011405 61 2.91e-05 CACACTTCTT CAGGGCTG CATTAAGTAC chr2R:21323970-21324090 105 2.91e-05 GCGGTTTGGC CAGGGCTG CAGCATCG chr2L:10970342-10970462 55 2.91e-05 TTTTCTTTAC CAGGGCTG AAACGCATAC chrX:18385214-18385334 43 2.91e-05 CGAGTGCTGC CAGGGCTG CGCAGTGCTC chr3L:11822210-11822330 48 2.91e-05 GCCGCAGTTC CAGGGCTG GTAAACTAAT chr2R:20308603-20308723 53 2.91e-05 TCGATGGCAC CAGGGCTG CACTTTCTCT chr2R:23988449-23988569 60 2.91e-05 ATGACGGCGC CAGGGCTG CAGGCTAAGG chr2L:18766381-18766501 18 2.91e-05 AAGCGGAGAT CAGGGCTG GACAATAGAA chr2L:13813726-13813846 70 2.91e-05 AGCATCGAAT CAGGGCTG GTCGCGAGCA chr2R:17548649-17548769 46 2.91e-05 TCGTTTGCAC CAGGGCTG CAAGATCAAC chr3R:21822662-21822782 34 2.91e-05 ACTAGAATTC CAGGGCTG CAGGTGCATT chrX:7300403-7300523 56 2.91e-05 AACATGGCGC CAGGGCTG GCATATTAAA chr2L:271705-271825 39 2.91e-05 AACACAAAAC CAGGGCTG CGTCGGCTGA chrX:3965266-3965386 44 2.91e-05 AATTCGATAC CAGGGCTG CGCAACAACT chrX:10854888-10855008 75 2.91e-05 CTGGTAAAAC CAGGGCTG GAGCATACGC chrX:22482307-22482427 70 2.91e-05 TATCTGACGT CAGGGCTG CATGGACTTC chrX:8407220-8407340 53 2.91e-05 GGTATTTTTC CAGGGCTG GAAAGTGCTG chrX:644083-644203 98 2.91e-05 CTAAAAAAAC CAGGGCTG CATTAGTCAG chr3R:12972269-12972389 55 2.91e-05 AATTGGTTGC CAGGGCTG CAGCCACCGT chr2L:1752061-1752181 32 2.91e-05 GGTGGCCGAC CAGGGCTG CCACATCGCT chrX:15785513-15785633 46 2.91e-05 GGTATTTTTC CAGGGCTG GAAAGTGTTG chr3R:28696120-28696240 62 2.91e-05 ACTTGAATAC CAGGGCTG GTCGCTGGTG chr3R:26876576-26876696 56 2.91e-05 GGCTGAGCAC CAGGGCTG CATTATTGTT chr2R:18094669-18094789 38 2.91e-05 GCGACATGAC CAGGGCTG AACAAATCTG chr3R:13382714-13382834 52 2.91e-05 TTCGCAAAAC CAGGGCTG CAATGCGCTG chrX:684778-684898 39 2.91e-05 TCGAGAGTTT CAGGGCTG CTGAAATTTC chr2L:1728681-1728801 40 2.91e-05 ACTTTAAGAC CAGGGCTG ACAATGGCAG chrX:644634-644754 81 2.91e-05 CTAAAAAAAC CAGGGCTG CATTAGTCAG chr3L:11623724-11623844 64 2.91e-05 TTTCGGAGGA CAGGGCTG CATAGTCGAC chr2R:16017096-16017216 60 2.91e-05 AATCCAATGA CAGGGCTG GCAACAAAAA chrX:16786978-16787098 50 2.91e-05 GGTATTTTTC CAGGGCTG GAAATTGCTG chr2R:17737199-17737319 47 2.91e-05 CCAAATAAGC CAGGGCTG CATCGCAGTA chr3R:22753069-22753189 57 2.91e-05 CTGTTAGCTT CAGGGCTG GGTTGCTATT chr3L:16595040-16595160 31 2.91e-05 ATAAAAGATC CAGGGCTG CATACTAGTG chrX:18479764-18479884 60 2.91e-05 GTCCCGAAAC CAGGGCTG CTGCAAAACG chr2L:10976348-10976468 56 2.91e-05 GCATTGGGGC CAGGGCTG GAGCACTAGT chrX:10621777-10621897 39 2.91e-05 GCGTCATGAG CAGGGCTG CAGTGCAAGA chr2L:6448484-6448604 64 2.91e-05 TCAAGGTAGC CAGGGCTG GAATAGTAGG chr2L:560336-560456 54 2.91e-05 CCTATCGAAC CAGGGCTG GGCAAAGTTG chrX:15701179-15701299 35 2.91e-05 GTGTAAAAAT CAGGGCTG CACAGGCGGC chrX:22471991-22472111 53 2.91e-05 TGTTAAGTAA CAGGGCTG GCGATAGTAG chr2R:7931004-7931124 43 2.91e-05 ACATTTGGAC CAGGGCTG TCGCGTAACT chrX:6687417-6687537 33 2.91e-05 ATAACCGCAC CAGGGCTG AGCCGATTGC chr2R:9865578-9865698 66 3.63e-05 CTGTGTTTAG GAGCCCTG GTTATCGCAC chr3R:27283731-27283851 64 3.63e-05 CGGTTTTGTG GAGCCCTG GTTGTGGTAA chr2L:3862607-3862727 61 7.31e-05 AAATTTTTCC CATCCCTG CTTGAAACAC chr3R:10121667-10121787 64 7.31e-05 ATTAAGTTTG TAGCCCTG TCTGGATAAA chr3R:19094896-19095016 59 7.31e-05 GAATCTGTGG TAGCCCTG GTTCAGTTTC chr3L:3219019-3219139 75 7.31e-05 CAAAGAAATG CATCCCTG TTCATGTGCG chr2L:1177597-1177717 63 7.31e-05 TGGCACTTGG TAGCCCTG GAGCTATCGG chrX:21035365-21035485 43 7.31e-05 CATCGGGCTG TAGCCCTG GGTATCGTAA chr3L:4169973-4170093 57 7.31e-05 TAAAATGTTT CATCCCTG GGAAGAGGGT chr3R:9335116-9335236 55 7.31e-05 TTGCTTATCG CATCCCTG GAAATATCTA chr3L:7320006-7320126 48 7.31e-05 AAATGTCATC CATCCCTG GTTCGCTTAT chr2R:22885990-22886110 75 7.31e-05 GTGCGCGTTG CATCCCTG GTTCTGGTGG chrX:15450166-15450286 81 7.31e-05 AACCAGTTCC CATCCCTG GGGCCGCCAT chr2L:21104472-21104592 66 7.31e-05 GAGCGACTGC CATCCCTG GCGGATGTCC chr3L:13997127-13997247 35 7.31e-05 ATAGATGTTG CATCCCTG GAATTGCGCC chr2R:24668304-24668424 69 7.31e-05 AATGAAGGTC CATCCCTG GTATAACCGA chrX:1901885-1902005 51 7.31e-05 ATCGACGTCG TAGCCCTG AAACTAAATC chr2L:11086526-11086646 42 7.31e-05 CCTAACGCAG CATCCCTG GAGCATCTGA chr2L:7013223-7013343 63 7.31e-05 AAATTTGATG CATCCCTG GAGTGACTAT chr2R:16608770-16608890 66 1.20e-04 CCGTTGTATG CAGCCCTA AAATTGAACT chr3L:11214420-11214540 31 1.20e-04 TAAATGTTGC CAGCCCTA GCTTAACATT chr2L:16679999-16680119 68 1.20e-04 AGTTTTGCTC CAGCCCTA TCGCAAACTA chr2R:24779845-24779965 57 1.20e-04 CGTAATTTGC CAGCCCTA GATTTTAGTG chrX:18367856-18367976 72 1.20e-04 TTTTTTTGTG CAGCCCTA TTACCCTGAC chrX:16598516-16598636 69 1.20e-04 ATTTATTTTC CAGCCCTA AAAATGTAAA chr3R:8264404-8264524 21 1.68e-04 TTCATGCGTC GAGGGCTG GGTACAAAGT chr3R:25851260-25851380 23 1.68e-04 ACTGTAAAGC GAGGGCTG CACTTGCAAT chr2R:10468525-10468645 85 1.68e-04 ATATCGAAAC GAGGGCTG CACAATCACT chrX:13370935-13371055 43 1.68e-04 GTTTGGCTGC GAGGGCTG CAGACGTGAT chr3R:14879347-14879467 68 1.68e-04 GCAGGCCAAC GAGGGCTG CAACAGCTGA chr2L:13549599-13549719 77 1.68e-04 TGAAGTGGAC GAGGGCTG CAAAATAAAG chr3L:2237179-2237299 112 2.18e-04 GCCGTACAAA TAGGGCTG A chr2R:9692124-9692244 75 2.18e-04 TCACTAAGAC CAGGGATG CCAAGTCAGC chr3L:9838644-9838764 51 2.18e-04 CAGCCTTAAC CAGGGATG GAAAATGGGA chr2R:14258941-14259061 67 2.18e-04 GCAACTCTGG CAACCCTG GTCGAGGGGG chr2L:4310542-4310662 71 2.18e-04 TTGTGTAATG CAACCCTG GATTTCGTGT chr2L:9437274-9437394 52 2.18e-04 AACGCCATGT CAGGGATG CAGGCTGGCG chr2R:17792473-17792593 69 2.18e-04 AATGTAAGTG CAACCCTG CCGAAAGTTT chr3R:19632987-19633107 78 2.18e-04 TCTAGCCGAC CAGGGATG GCTGATGGCG chr2R:7539676-7539796 68 2.18e-04 GAAGCACTGC CAGGGATG GATGCTCATT chrX:13612019-13612139 48 2.18e-04 CGATAGTTTC CAGGGATG CAGTCGCGAT chr2L:17590046-17590166 88 2.18e-04 TTTTCTTATG CAACCCTG CATCATAATA chr4:253300-253420 64 2.18e-04 TAATATTCTG CAACCCTG AAAATATTCG chr2L:9699682-9699802 25 2.18e-04 ATATTTAAGC TAGGGCTG CAGAGAACAC chrX:5876785-5876905 45 2.18e-04 GCGTGAAATG CAACCCTG ATTTATCACA chrX:19579252-19579372 55 2.18e-04 cacacgcaca caGGGATG GAGAGACAGT chrX:6533890-6534010 37 2.18e-04 CCAGTTATGC CAACCCTG AAACTACCGA chr2R:15340362-15340482 45 2.18e-04 GGAAAACCTT CAACCCTG ATTGGAGCCC chr2L:4382671-4382791 67 2.18e-04 CAACAACGGG CAACCCTG TTTTCAGCGT chrX:9085816-9085936 29 2.18e-04 TCCGTTAAAA TAGGGCTG AATAAATAAT chr2L:11100849-11100969 63 2.18e-04 ACGCGGATGC CAGGGATG GACGCTCAGC chr3L:6994595-6994715 40 2.18e-04 CCGCAGTTGC CAACCCTG ATATTTTCCC chr3R:7643669-7643789 25 2.18e-04 TTAAAACTTT TAGGGCTG GTCGAACTTA chr2L:5037376-5037496 55 2.48e-04 CTCAAAAGAC CAGGGCTA AGGGTAGGCT chrX:20433272-20433392 45 2.48e-04 AAGTGACGAG CAGGGCTA CCAACGAATC chr3L:18869621-18869741 83 2.48e-04 CTTTGCGTTC CAGCCCTT CAAAAAGCTC chr3L:9679081-9679201 47 2.48e-04 TTGTTTTGAC CAGGGCTA CGTTAGAAAC chr3L:16613052-16613172 42 2.48e-04 ATCATCTCCC CAGCCCTT GATCGACGTT chrX:658181-658301 46 2.48e-04 GAGCGTTTAG CAGCCCTT AAAAAGCTTT chr2R:17140882-17141002 42 2.48e-04 TATATATTTT CAGGGCTA CGAAACTTAC chr3R:30394396-30394516 80 2.74e-04 TTTTCGGCGC CACCCCTG AGGGTTGCAA chr2R:25190573-25190693 67 2.74e-04 ATGCGTTGTG CACCCCTG CATACAAAAC chr3R:20551510-20551630 80 2.74e-04 GCAACCCTCG CACCCCTG TTAAGTTAAC chr2L:19064857-19064977 36 2.74e-04 TAACGTATGT CACCCCTG GCGAGCTACT chr3L:8966733-8966853 71 2.74e-04 AGAAGTGCTT CACCCCTG CGAGCTATCG chr2R:24574479-24574599 68 3.06e-04 GGTGTTTTCC CAGCCCGG CACACTAAAC chrX:7678933-7679053 16 3.29e-04 GATTTTCCTT CAGGGCTT CTACAGATTG chr2L:7810699-7810819 36 3.29e-04 TTTGCTAGAC CAGGGCTT GAGAAACACA chr3R:9334650-9334770 62 3.29e-04 GCGCGCAATC CAGGGCTT CGCAATTCTT chr3L:4406068-4406188 75 3.29e-04 ATTAATCGAC CAGGGCTT ATTTTTAGTT chr3R:29202567-29202687 38 3.29e-04 TGGTGCTTTA CAGCGCGG ATGGTTAGGC chrX:336765-336885 49 3.29e-04 AACACTTAAC CAGGGCTT CAATAAGAAA chr3R:29858927-29859047 87 3.57e-04 TGGCGCAAAC CAGGGCGG AATTTAAAAA chrX:16422210-16422330 37 3.57e-04 GACTTACCGC CAGGGCGG GACAACAACC chr2R:12201114-12201234 30 3.57e-04 GGCATTTATC CAGTCCTG TTTGCAGTAC chr2L:4385992-4386112 108 3.57e-04 CTGTAAGGCG CAGTCCTG TTAGA chr2R:24197712-24197832 92 3.67e-04 CATTCCAGGC CAGTGCTG GGCCAGCTGT chr3R:30583679-30583799 36 3.67e-04 AGTTTTTACG CAGTGCTG GGAAATTTTG chr2L:15248438-15248558 62 3.77e-04 TTTTTAAATG AAGCCCTG GCTTTACAAA chr3L:247461-247581 21 3.77e-04 ATTTGCTTTG AAGCCCTG AAAACATCGT chr2R:16640851-16640971 64 3.77e-04 CCGAAATACG AAGCCCTG GGCGGTCGAC chr3R:22492921-22493041 77 3.77e-04 ATTGTTTTGG AAGCCCTG GTTGAAAATC chr2R:13224581-13224701 43 4.57e-04 ATACGAAACC CAGGGGTG CCAACCGAGT chrX:4139214-4139334 66 4.57e-04 GCAGTTGGGC CAGGGGTG CAGCGCCACT chr3R:28544753-28544873 73 4.57e-04 AGCTGTTTTA CAGCGCCG CTAACCATCG chr3L:11836831-11836951 28 4.57e-04 TAAAACTGTA CAGGGGTG CAGTAAATAA chr2L:6920245-6920365 43 4.95e-04 CAATAACTTC CAGGGCCG AAAAATGAAA chrX:18137052-18137172 70 5.13e-04 TGCACGGTCG CAGCGCAG TCATACTGGT chr2L:12712393-12712513 59 5.13e-04 TGTCTGGTGC CAGGGTTG CAAAGCAATG chr2L:6723810-6723930 90 5.13e-04 AGTGAAGAAC CAGGGTTG GTTTACGGAT chr3L:1313039-1313159 56 5.13e-04 GGTTTATCCC CAGGGTTG ATAGCTCTGA chr3L:14002025-14002145 68 5.40e-04 AATAGTATAG GATCCCTG GTCGAGCGAT chr3R:14711600-14711720 33 6.39e-04 AGGAAAAGAT GAGCGATG TCAAATATAT chr3L:9972640-9972760 72 6.39e-04 CAAGAAATTG TATCCCTG GTTTCATTCA chr3R:26945369-26945489 33 6.39e-04 ACTGCTTATG CGGCCCTG AAATTCAGTA chrX:2172443-2172563 33 6.39e-04 ATATCAATTG CAGGGCAG CAAAGCAAAG chr2L:8685962-8686082 32 6.39e-04 AAGAGCTACT CCGCCCTG GTAGAACTAG chrX:15697386-15697506 64 6.39e-04 GCCAGGCTGG CAGCACTG CCGGATCAGC chr2R:10885145-10885265 100 7.61e-04 CCATCTCTAT GAGGCATG TACATAAAAG chr2L:10333753-10333873 76 7.61e-04 CTAACGCGAC TATCGCTG GAGCCCTCGT chr2R:18094876-18094996 33 7.61e-04 TGCAATATAA CATCGATG TTTCTTAACA chr2R:24187562-24187682 102 9.05e-04 CACTCGCAAG CATGCATG TGGCGGTGAT chr2L:8686168-8686288 86 9.05e-04 CTGGCACTAC CATCGCTA ATTCGCATAA chr3R:22491543-22491663 108 9.05e-04 ATTGTTTAGG GAACCCTG GTTGA chr2R:23851049-23851169 35 9.05e-04 ATGATGATGC GAGGGATG CGATGCAAGG chr3L:19646454-19646574 15 9.05e-04 TTTTCCCCGC GAGGGATG TTTAGCCTAC chrX:9106550-9106670 82 1.06e-03 TGGTCCCTTT TAGGGATG GATTGCATAT chr3R:18980883-18981003 60 1.06e-03 TGCGTCGTCG TAGGGATG GCGAAAAACA chr3R:27954079-27954199 63 1.21e-03 GGCACACTAC GAGCGCTT TGGTGGTCTA chr3R:11822451-11822571 48 1.21e-03 AGTCTAGGAC CAGGGATA CCATTCAAAT chr3R:17040582-17040702 67 1.21e-03 CACTCGCTCG CATCCCTT CTTTGTCGAT chr3L:3435112-3435232 112 1.21e-03 TGGTATTACC CAACCCTA A chrX:11579009-11579129 80 1.21e-03 CACACTAAGC TAGGGCTA CTTTTTATAT chr2R:13239450-13239570 62 1.21e-03 AGCACTACAT CAGGGATA CCACACAAAT chr3R:19229343-19229463 67 1.21e-03 TGAACTCCTG TAGCCCTT TGCTTCGTAG chrX:7735523-7735643 74 1.21e-03 AAAATAGGAC CAGGGATA CTCAAATAAC chr2R:24661430-24661550 67 1.34e-03 CGTTTTTTCG TACCCCTG GTAGTAAACA chr2R:24687377-24687497 82 1.49e-03 TCGTCTTCGC CACCCCTA CTTTTGTATT chr2R:22420962-22421082 81 1.49e-03 TGCATCCCTC TAGCCCGG CAAATTGCGC chrX:18479970-18480090 28 1.63e-03 ACTGAATGAA CAACCCTT ATGGCTTCTT chr2R:24668507-24668627 75 1.63e-03 AATGTGGCTC CAGGGATT TAAAAAATTC chr2R:12279256-12279376 57 1.63e-03 ATATCGCTCA TACGCCTG TTAGGCCCTG chr2R:16221782-16221902 42 1.84e-03 CGATTTGACC CAGGGAGG GGAGCAACTA chr3L:17804675-17804795 32 1.99e-03 GATTTAGGCA CAGTGCTA CCAGATCGGT chrX:16426581-16426701 52 2.15e-03 AGCTGTTCGG AAGCCCTA GGGTGGACCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:16180198-16180318 7.1e-06 44_[+1]_68 chr4:980031-980151 7.1e-06 67_[+1]_45 chrX:19268832-19268952 7.1e-06 39_[+1]_73 chr2R:19129531-19129651 7.1e-06 61_[+1]_51 chr3R:12422711-12422831 7.1e-06 64_[+1]_48 chr3L:16602969-16603089 7.1e-06 107_[+1]_5 chr3R:31221151-31221271 7.1e-06 65_[+1]_47 chrX:14841983-14842103 7.1e-06 41_[+1]_71 chr3R:13676592-13676712 7.1e-06 55_[+1]_57 chr3R:31743386-31743506 7.1e-06 44_[+1]_68 chr2R:10886708-10886828 7.1e-06 79_[+1]_33 chr2R:7541274-7541394 7.1e-06 69_[+1]_43 chr2R:14503850-14503970 7.1e-06 58_[+1]_54 chr3L:7604887-7605007 7.1e-06 36_[+1]_76 chr2L:5325020-5325140 7.1e-06 42_[+1]_70 chr3R:15857609-15857729 7.1e-06 92_[+1]_20 chr3L:17847015-17847135 7.1e-06 63_[+1]_49 chr2R:8333731-8333851 7.1e-06 55_[+1]_57 chr3R:18167690-18167810 7.1e-06 58_[+1]_54 chrX:12497001-12497121 7.1e-06 84_[+1]_28 chrX:23005200-23005320 7.1e-06 63_[+1]_49 chr3R:18667798-18667918 7.1e-06 65_[+1]_47 chr3R:13710781-13710901 7.1e-06 57_[+1]_55 chr2R:24574269-24574389 7.1e-06 11_[+1]_101 chr3R:31220600-31220720 7.1e-06 78_[+1]_34 chr2R:5663201-5663321 7.1e-06 69_[+1]_43 chr2L:21154030-21154150 7.1e-06 52_[+1]_60 chr3L:8109040-8109160 7.1e-06 69_[+1]_43 chr2R:24561015-24561135 7.1e-06 51_[+1]_61 chrX:19762329-19762449 7.1e-06 48_[+1]_64 chr3L:8956738-8956858 7.1e-06 61_[+1]_51 chr2R:7463416-7463536 7.1e-06 79_[+1]_33 chr3L:4286957-4287077 7.1e-06 67_[+1]_45 chr2L:13367515-13367635 7.1e-06 66_[+1]_46 chr3R:6149712-6149832 7.1e-06 36_[+1]_76 chr2R:24664346-24664466 7.1e-06 70_[+1]_42 chr3L:6943752-6943872 7.1e-06 64_[+1]_48 chr3L:15509517-15509637 7.1e-06 80_[+1]_32 chr3R:17733501-17733621 7.1e-06 80_[+1]_32 chr2R:7791320-7791440 7.1e-06 46_[+1]_66 chr2R:22874604-22874724 7.1e-06 106_[+1]_6 chr2R:12423498-12423618 7.1e-06 71_[+1]_41 chr3L:13040983-13041103 7.1e-06 70_[+1]_42 chr3R:15249847-15249967 7.1e-06 34_[+1]_78 chr2L:9089686-9089806 7.1e-06 108_[+1]_4 chr2R:10075598-10075718 2.9e-05 30_[+1]_82 chr3R:13011285-13011405 2.9e-05 60_[+1]_52 chr2R:21323970-21324090 2.9e-05 104_[+1]_8 chr2L:10970342-10970462 2.9e-05 54_[+1]_58 chrX:18385214-18385334 2.9e-05 42_[+1]_70 chr3L:11822210-11822330 2.9e-05 47_[+1]_65 chr2R:20308603-20308723 2.9e-05 52_[+1]_60 chr2R:23988449-23988569 2.9e-05 59_[+1]_53 chr2L:18766381-18766501 2.9e-05 17_[+1]_95 chr2L:13813726-13813846 2.9e-05 69_[+1]_43 chr2R:17548649-17548769 2.9e-05 45_[+1]_67 chr3R:21822662-21822782 2.9e-05 33_[+1]_79 chrX:7300403-7300523 2.9e-05 55_[+1]_57 chr2L:271705-271825 2.9e-05 38_[+1]_74 chrX:3965266-3965386 2.9e-05 43_[+1]_69 chrX:10854888-10855008 2.9e-05 74_[+1]_38 chrX:22482307-22482427 2.9e-05 69_[+1]_43 chrX:8407220-8407340 2.9e-05 52_[+1]_60 chrX:644083-644203 2.9e-05 97_[+1]_15 chr3R:12972269-12972389 2.9e-05 54_[+1]_58 chr2L:1752061-1752181 2.9e-05 31_[+1]_81 chrX:15785513-15785633 2.9e-05 45_[+1]_67 chr3R:28696120-28696240 2.9e-05 61_[+1]_51 chr3R:26876576-26876696 2.9e-05 55_[+1]_57 chr2R:18094669-18094789 2.9e-05 37_[+1]_75 chr3R:13382714-13382834 2.9e-05 51_[+1]_61 chrX:684778-684898 2.9e-05 38_[+1]_74 chr2L:1728681-1728801 2.9e-05 39_[+1]_73 chrX:644634-644754 2.9e-05 80_[+1]_32 chr3L:11623724-11623844 2.9e-05 63_[+1]_49 chr2R:16017096-16017216 2.9e-05 59_[+1]_53 chrX:16786978-16787098 2.9e-05 49_[+1]_63 chr2R:17737199-17737319 2.9e-05 46_[+1]_66 chr3R:22753069-22753189 2.9e-05 56_[+1]_56 chr3L:16595040-16595160 2.9e-05 30_[+1]_82 chrX:18479764-18479884 2.9e-05 59_[+1]_53 chr2L:10976348-10976468 2.9e-05 55_[+1]_57 chrX:10621777-10621897 2.9e-05 38_[+1]_74 chr2L:6448484-6448604 2.9e-05 63_[+1]_49 chr2L:560336-560456 2.9e-05 53_[+1]_59 chrX:15701179-15701299 2.9e-05 34_[+1]_78 chrX:22471991-22472111 2.9e-05 52_[+1]_60 chr2R:7931004-7931124 2.9e-05 42_[+1]_70 chrX:6687417-6687537 2.9e-05 32_[+1]_80 chr2R:9865578-9865698 3.6e-05 65_[+1]_47 chr3R:27283731-27283851 3.6e-05 63_[+1]_49 chr2L:3862607-3862727 7.3e-05 60_[+1]_52 chr3R:10121667-10121787 7.3e-05 63_[+1]_49 chr3R:19094896-19095016 7.3e-05 58_[+1]_54 chr3L:3219019-3219139 7.3e-05 74_[+1]_38 chr2L:1177597-1177717 7.3e-05 62_[+1]_50 chrX:21035365-21035485 7.3e-05 42_[+1]_70 chr3L:4169973-4170093 7.3e-05 56_[+1]_56 chr3R:9335116-9335236 7.3e-05 54_[+1]_58 chr3L:7320006-7320126 7.3e-05 47_[+1]_65 chr2R:22885990-22886110 7.3e-05 74_[+1]_38 chrX:15450166-15450286 7.3e-05 80_[+1]_32 chr2L:21104472-21104592 7.3e-05 65_[+1]_47 chr3L:13997127-13997247 7.3e-05 34_[+1]_78 chr2R:24668304-24668424 7.3e-05 68_[+1]_44 chrX:1901885-1902005 7.3e-05 50_[+1]_62 chr2L:11086526-11086646 7.3e-05 41_[+1]_71 chr2L:7013223-7013343 7.3e-05 62_[+1]_50 chr2R:16608770-16608890 0.00012 65_[+1]_47 chr3L:11214420-11214540 0.00012 30_[+1]_82 chr2L:16679999-16680119 0.00012 67_[+1]_45 chr2R:24779845-24779965 0.00012 56_[+1]_56 chrX:18367856-18367976 0.00012 71_[+1]_41 chrX:16598516-16598636 0.00012 68_[+1]_44 chr3R:8264404-8264524 0.00017 20_[+1]_92 chr3R:25851260-25851380 0.00017 22_[+1]_90 chr2R:10468525-10468645 0.00017 84_[+1]_28 chrX:13370935-13371055 0.00017 42_[+1]_70 chr3R:14879347-14879467 0.00017 67_[+1]_45 chr2L:13549599-13549719 0.00017 76_[+1]_36 chr3L:2237179-2237299 0.00022 111_[+1]_1 chr2R:9692124-9692244 0.00022 74_[+1]_38 chr3L:9838644-9838764 0.00022 50_[+1]_62 chr2R:14258941-14259061 0.00022 66_[+1]_46 chr2L:4310542-4310662 0.00022 70_[+1]_42 chr2L:9437274-9437394 0.00022 51_[+1]_61 chr2R:17792473-17792593 0.00022 68_[+1]_44 chr3R:19632987-19633107 0.00022 77_[+1]_35 chr2R:7539676-7539796 0.00022 67_[+1]_45 chrX:13612019-13612139 0.00022 47_[+1]_65 chr2L:17590046-17590166 0.00022 87_[+1]_25 chr4:253300-253420 0.00022 63_[+1]_49 chr2L:9699682-9699802 0.00022 24_[+1]_88 chrX:5876785-5876905 0.00022 44_[+1]_68 chrX:19579252-19579372 0.00022 54_[+1]_58 chrX:6533890-6534010 0.00022 36_[+1]_76 chr2R:15340362-15340482 0.00022 44_[+1]_68 chr2L:4382671-4382791 0.00022 66_[+1]_46 chrX:9085816-9085936 0.00022 28_[+1]_84 chr2L:11100849-11100969 0.00022 62_[+1]_50 chr3L:6994595-6994715 0.00022 39_[+1]_73 chr3R:7643669-7643789 0.00022 24_[+1]_88 chr2L:5037376-5037496 0.00025 54_[+1]_58 chrX:20433272-20433392 0.00025 44_[+1]_68 chr3L:18869621-18869741 0.00025 82_[+1]_30 chr3L:9679081-9679201 0.00025 46_[+1]_66 chr3L:16613052-16613172 0.00025 41_[+1]_71 chrX:658181-658301 0.00025 45_[+1]_67 chr2R:17140882-17141002 0.00025 41_[+1]_71 chr3R:30394396-30394516 0.00027 79_[+1]_33 chr2R:25190573-25190693 0.00027 66_[+1]_46 chr3R:20551510-20551630 0.00027 79_[+1]_33 chr2L:19064857-19064977 0.00027 35_[+1]_77 chr3L:8966733-8966853 0.00027 70_[+1]_42 chr2R:24574479-24574599 0.00031 67_[+1]_45 chrX:7678933-7679053 0.00033 15_[+1]_97 chr2L:7810699-7810819 0.00033 35_[+1]_77 chr3R:9334650-9334770 0.00033 61_[+1]_51 chr3L:4406068-4406188 0.00033 74_[+1]_38 chr3R:29202567-29202687 0.00033 37_[+1]_75 chrX:336765-336885 0.00033 48_[+1]_64 chr3R:29858927-29859047 0.00036 86_[+1]_26 chrX:16422210-16422330 0.00036 36_[+1]_76 chr2R:12201114-12201234 0.00036 29_[+1]_83 chr2L:4385992-4386112 0.00036 107_[+1]_5 chr2R:24197712-24197832 0.00037 91_[+1]_21 chr3R:30583679-30583799 0.00037 35_[+1]_77 chr2L:15248438-15248558 0.00038 61_[+1]_51 chr3L:247461-247581 0.00038 20_[+1]_92 chr2R:16640851-16640971 0.00038 63_[+1]_49 chr3R:22492921-22493041 0.00038 76_[+1]_36 chr2R:13224581-13224701 0.00046 42_[+1]_70 chrX:4139214-4139334 0.00046 65_[+1]_47 chr3R:28544753-28544873 0.00046 72_[+1]_40 chr3L:11836831-11836951 0.00046 27_[+1]_85 chr2L:6920245-6920365 0.0005 42_[+1]_70 chrX:18137052-18137172 0.00051 69_[+1]_43 chr2L:12712393-12712513 0.00051 58_[+1]_54 chr2L:6723810-6723930 0.00051 89_[+1]_23 chr3L:1313039-1313159 0.00051 55_[+1]_57 chr3L:14002025-14002145 0.00054 67_[+1]_45 chr3R:14711600-14711720 0.00064 32_[+1]_80 chr3L:9972640-9972760 0.00064 71_[+1]_41 chr3R:26945369-26945489 0.00064 32_[+1]_80 chrX:2172443-2172563 0.00064 32_[+1]_80 chr2L:8685962-8686082 0.00064 31_[+1]_81 chrX:15697386-15697506 0.00064 63_[+1]_49 chr2R:10885145-10885265 0.00076 99_[+1]_13 chr2L:10333753-10333873 0.00076 75_[+1]_37 chr2R:18094876-18094996 0.00076 32_[+1]_80 chr2R:24187562-24187682 0.0009 101_[+1]_11 chr2L:8686168-8686288 0.0009 85_[+1]_27 chr3R:22491543-22491663 0.0009 107_[+1]_5 chr2R:23851049-23851169 0.0009 34_[+1]_78 chr3L:19646454-19646574 0.0009 14_[+1]_98 chrX:9106550-9106670 0.0011 81_[+1]_31 chr3R:18980883-18981003 0.0011 59_[+1]_53 chr3R:27954079-27954199 0.0012 62_[+1]_50 chr3R:11822451-11822571 0.0012 47_[+1]_65 chr3R:17040582-17040702 0.0012 66_[+1]_46 chr3L:3435112-3435232 0.0012 111_[+1]_1 chrX:11579009-11579129 0.0012 79_[+1]_33 chr2R:13239450-13239570 0.0012 61_[+1]_51 chr3R:19229343-19229463 0.0012 66_[+1]_46 chrX:7735523-7735643 0.0012 73_[+1]_39 chr2R:24661430-24661550 0.0013 66_[+1]_46 chr2R:24687377-24687497 0.0015 81_[+1]_31 chr2R:22420962-22421082 0.0015 80_[+1]_32 chrX:18479970-18480090 0.0016 27_[+1]_85 chr2R:24668507-24668627 0.0016 74_[+1]_38 chr2R:12279256-12279376 0.0016 56_[+1]_56 chr2R:16221782-16221902 0.0018 41_[+1]_71 chr3L:17804675-17804795 0.002 31_[+1]_81 chrX:16426581-16426701 0.0021 51_[+1]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGSSCTG width=8 seqs=214 chr2R:16180198-16180318 ( 45) CAGCCCTG 1 chr4:980031-980151 ( 68) CAGCCCTG 1 chrX:19268832-19268952 ( 40) CAGCCCTG 1 chr2R:19129531-19129651 ( 62) CAGCCCTG 1 chr3R:12422711-12422831 ( 65) CAGCCCTG 1 chr3L:16602969-16603089 ( 108) CAGCCCTG 1 chr3R:31221151-31221271 ( 66) CAGCCCTG 1 chrX:14841983-14842103 ( 42) CAGCCCTG 1 chr3R:13676592-13676712 ( 56) CAGCCCTG 1 chr3R:31743386-31743506 ( 45) CAGCCCTG 1 chr2R:10886708-10886828 ( 80) CAGCCCTG 1 chr2R:7541274-7541394 ( 70) CAGCCCTG 1 chr2R:14503850-14503970 ( 59) CAGCCCTG 1 chr3L:7604887-7605007 ( 37) CAGCCCTG 1 chr2L:5325020-5325140 ( 43) CAGCCCTG 1 chr3R:15857609-15857729 ( 93) CAGCCCTG 1 chr3L:17847015-17847135 ( 64) CAGCCCTG 1 chr2R:8333731-8333851 ( 56) CAGCCCTG 1 chr3R:18167690-18167810 ( 59) CAGCCCTG 1 chrX:12497001-12497121 ( 85) CAGCCCTG 1 chrX:23005200-23005320 ( 64) CAGCCCTG 1 chr3R:18667798-18667918 ( 66) CAGCCCTG 1 chr3R:13710781-13710901 ( 58) CAGCCCTG 1 chr2R:24574269-24574389 ( 12) CAGCCCTG 1 chr3R:31220600-31220720 ( 79) CAGCCCTG 1 chr2R:5663201-5663321 ( 70) CAGCCCTG 1 chr2L:21154030-21154150 ( 53) CAGCCCTG 1 chr3L:8109040-8109160 ( 70) CAGCCCTG 1 chr2R:24561015-24561135 ( 52) CAGCCCTG 1 chrX:19762329-19762449 ( 49) CAGCCCTG 1 chr3L:8956738-8956858 ( 62) CAGCCCTG 1 chr2R:7463416-7463536 ( 80) CAGCCCTG 1 chr3L:4286957-4287077 ( 68) CAGCCCTG 1 chr2L:13367515-13367635 ( 67) CAGCCCTG 1 chr3R:6149712-6149832 ( 37) CAGCCCTG 1 chr2R:24664346-24664466 ( 71) CAGCCCTG 1 chr3L:6943752-6943872 ( 65) CAGCCCTG 1 chr3L:15509517-15509637 ( 81) CAGCCCTG 1 chr3R:17733501-17733621 ( 81) CAGCCCTG 1 chr2R:7791320-7791440 ( 47) CAGCCCTG 1 chr2R:22874604-22874724 ( 107) CAGCCCTG 1 chr2R:12423498-12423618 ( 72) CAGCCCTG 1 chr3L:13040983-13041103 ( 71) CAGCCCTG 1 chr3R:15249847-15249967 ( 35) CAGCCCTG 1 chr2L:9089686-9089806 ( 109) CAGCCCTG 1 chr2R:10075598-10075718 ( 31) CAGGGCTG 1 chr3R:13011285-13011405 ( 61) CAGGGCTG 1 chr2R:21323970-21324090 ( 105) CAGGGCTG 1 chr2L:10970342-10970462 ( 55) CAGGGCTG 1 chrX:18385214-18385334 ( 43) CAGGGCTG 1 chr3L:11822210-11822330 ( 48) CAGGGCTG 1 chr2R:20308603-20308723 ( 53) CAGGGCTG 1 chr2R:23988449-23988569 ( 60) CAGGGCTG 1 chr2L:18766381-18766501 ( 18) CAGGGCTG 1 chr2L:13813726-13813846 ( 70) CAGGGCTG 1 chr2R:17548649-17548769 ( 46) CAGGGCTG 1 chr3R:21822662-21822782 ( 34) CAGGGCTG 1 chrX:7300403-7300523 ( 56) CAGGGCTG 1 chr2L:271705-271825 ( 39) CAGGGCTG 1 chrX:3965266-3965386 ( 44) CAGGGCTG 1 chrX:10854888-10855008 ( 75) CAGGGCTG 1 chrX:22482307-22482427 ( 70) CAGGGCTG 1 chrX:8407220-8407340 ( 53) CAGGGCTG 1 chrX:644083-644203 ( 98) CAGGGCTG 1 chr3R:12972269-12972389 ( 55) CAGGGCTG 1 chr2L:1752061-1752181 ( 32) CAGGGCTG 1 chrX:15785513-15785633 ( 46) CAGGGCTG 1 chr3R:28696120-28696240 ( 62) CAGGGCTG 1 chr3R:26876576-26876696 ( 56) CAGGGCTG 1 chr2R:18094669-18094789 ( 38) CAGGGCTG 1 chr3R:13382714-13382834 ( 52) CAGGGCTG 1 chrX:684778-684898 ( 39) CAGGGCTG 1 chr2L:1728681-1728801 ( 40) CAGGGCTG 1 chrX:644634-644754 ( 81) CAGGGCTG 1 chr3L:11623724-11623844 ( 64) CAGGGCTG 1 chr2R:16017096-16017216 ( 60) CAGGGCTG 1 chrX:16786978-16787098 ( 50) CAGGGCTG 1 chr2R:17737199-17737319 ( 47) CAGGGCTG 1 chr3R:22753069-22753189 ( 57) CAGGGCTG 1 chr3L:16595040-16595160 ( 31) CAGGGCTG 1 chrX:18479764-18479884 ( 60) CAGGGCTG 1 chr2L:10976348-10976468 ( 56) CAGGGCTG 1 chrX:10621777-10621897 ( 39) CAGGGCTG 1 chr2L:6448484-6448604 ( 64) CAGGGCTG 1 chr2L:560336-560456 ( 54) CAGGGCTG 1 chrX:15701179-15701299 ( 35) CAGGGCTG 1 chrX:22471991-22472111 ( 53) CAGGGCTG 1 chr2R:7931004-7931124 ( 43) CAGGGCTG 1 chrX:6687417-6687537 ( 33) CAGGGCTG 1 chr2R:9865578-9865698 ( 66) GAGCCCTG 1 chr3R:27283731-27283851 ( 64) GAGCCCTG 1 chr2L:3862607-3862727 ( 61) CATCCCTG 1 chr3R:10121667-10121787 ( 64) TAGCCCTG 1 chr3R:19094896-19095016 ( 59) TAGCCCTG 1 chr3L:3219019-3219139 ( 75) CATCCCTG 1 chr2L:1177597-1177717 ( 63) TAGCCCTG 1 chrX:21035365-21035485 ( 43) TAGCCCTG 1 chr3L:4169973-4170093 ( 57) CATCCCTG 1 chr3R:9335116-9335236 ( 55) CATCCCTG 1 chr3L:7320006-7320126 ( 48) CATCCCTG 1 chr2R:22885990-22886110 ( 75) CATCCCTG 1 chrX:15450166-15450286 ( 81) CATCCCTG 1 chr2L:21104472-21104592 ( 66) CATCCCTG 1 chr3L:13997127-13997247 ( 35) CATCCCTG 1 chr2R:24668304-24668424 ( 69) CATCCCTG 1 chrX:1901885-1902005 ( 51) TAGCCCTG 1 chr2L:11086526-11086646 ( 42) CATCCCTG 1 chr2L:7013223-7013343 ( 63) CATCCCTG 1 chr2R:16608770-16608890 ( 66) CAGCCCTA 1 chr3L:11214420-11214540 ( 31) CAGCCCTA 1 chr2L:16679999-16680119 ( 68) CAGCCCTA 1 chr2R:24779845-24779965 ( 57) CAGCCCTA 1 chrX:18367856-18367976 ( 72) CAGCCCTA 1 chrX:16598516-16598636 ( 69) CAGCCCTA 1 chr3R:8264404-8264524 ( 21) GAGGGCTG 1 chr3R:25851260-25851380 ( 23) GAGGGCTG 1 chr2R:10468525-10468645 ( 85) GAGGGCTG 1 chrX:13370935-13371055 ( 43) GAGGGCTG 1 chr3R:14879347-14879467 ( 68) GAGGGCTG 1 chr2L:13549599-13549719 ( 77) GAGGGCTG 1 chr3L:2237179-2237299 ( 112) TAGGGCTG 1 chr2R:9692124-9692244 ( 75) CAGGGATG 1 chr3L:9838644-9838764 ( 51) CAGGGATG 1 chr2R:14258941-14259061 ( 67) CAACCCTG 1 chr2L:4310542-4310662 ( 71) CAACCCTG 1 chr2L:9437274-9437394 ( 52) CAGGGATG 1 chr2R:17792473-17792593 ( 69) CAACCCTG 1 chr3R:19632987-19633107 ( 78) CAGGGATG 1 chr2R:7539676-7539796 ( 68) CAGGGATG 1 chrX:13612019-13612139 ( 48) CAGGGATG 1 chr2L:17590046-17590166 ( 88) CAACCCTG 1 chr4:253300-253420 ( 64) CAACCCTG 1 chr2L:9699682-9699802 ( 25) TAGGGCTG 1 chrX:5876785-5876905 ( 45) CAACCCTG 1 chrX:19579252-19579372 ( 55) CAGGGATG 1 chrX:6533890-6534010 ( 37) CAACCCTG 1 chr2R:15340362-15340482 ( 45) CAACCCTG 1 chr2L:4382671-4382791 ( 67) CAACCCTG 1 chrX:9085816-9085936 ( 29) TAGGGCTG 1 chr2L:11100849-11100969 ( 63) CAGGGATG 1 chr3L:6994595-6994715 ( 40) CAACCCTG 1 chr3R:7643669-7643789 ( 25) TAGGGCTG 1 chr2L:5037376-5037496 ( 55) CAGGGCTA 1 chrX:20433272-20433392 ( 45) CAGGGCTA 1 chr3L:18869621-18869741 ( 83) CAGCCCTT 1 chr3L:9679081-9679201 ( 47) CAGGGCTA 1 chr3L:16613052-16613172 ( 42) CAGCCCTT 1 chrX:658181-658301 ( 46) CAGCCCTT 1 chr2R:17140882-17141002 ( 42) CAGGGCTA 1 chr3R:30394396-30394516 ( 80) CACCCCTG 1 chr2R:25190573-25190693 ( 67) CACCCCTG 1 chr3R:20551510-20551630 ( 80) CACCCCTG 1 chr2L:19064857-19064977 ( 36) CACCCCTG 1 chr3L:8966733-8966853 ( 71) CACCCCTG 1 chr2R:24574479-24574599 ( 68) CAGCCCGG 1 chrX:7678933-7679053 ( 16) CAGGGCTT 1 chr2L:7810699-7810819 ( 36) CAGGGCTT 1 chr3R:9334650-9334770 ( 62) CAGGGCTT 1 chr3L:4406068-4406188 ( 75) CAGGGCTT 1 chr3R:29202567-29202687 ( 38) CAGCGCGG 1 chrX:336765-336885 ( 49) CAGGGCTT 1 chr3R:29858927-29859047 ( 87) CAGGGCGG 1 chrX:16422210-16422330 ( 37) CAGGGCGG 1 chr2R:12201114-12201234 ( 30) CAGTCCTG 1 chr2L:4385992-4386112 ( 108) CAGTCCTG 1 chr2R:24197712-24197832 ( 92) CAGTGCTG 1 chr3R:30583679-30583799 ( 36) CAGTGCTG 1 chr2L:15248438-15248558 ( 62) AAGCCCTG 1 chr3L:247461-247581 ( 21) AAGCCCTG 1 chr2R:16640851-16640971 ( 64) AAGCCCTG 1 chr3R:22492921-22493041 ( 77) AAGCCCTG 1 chr2R:13224581-13224701 ( 43) CAGGGGTG 1 chrX:4139214-4139334 ( 66) CAGGGGTG 1 chr3R:28544753-28544873 ( 73) CAGCGCCG 1 chr3L:11836831-11836951 ( 28) CAGGGGTG 1 chr2L:6920245-6920365 ( 43) CAGGGCCG 1 chrX:18137052-18137172 ( 70) CAGCGCAG 1 chr2L:12712393-12712513 ( 59) CAGGGTTG 1 chr2L:6723810-6723930 ( 90) CAGGGTTG 1 chr3L:1313039-1313159 ( 56) CAGGGTTG 1 chr3L:14002025-14002145 ( 68) GATCCCTG 1 chr3R:14711600-14711720 ( 33) GAGCGATG 1 chr3L:9972640-9972760 ( 72) TATCCCTG 1 chr3R:26945369-26945489 ( 33) CGGCCCTG 1 chrX:2172443-2172563 ( 33) CAGGGCAG 1 chr2L:8685962-8686082 ( 32) CCGCCCTG 1 chrX:15697386-15697506 ( 64) CAGCACTG 1 chr2R:10885145-10885265 ( 100) GAGGCATG 1 chr2L:10333753-10333873 ( 76) TATCGCTG 1 chr2R:18094876-18094996 ( 33) CATCGATG 1 chr2R:24187562-24187682 ( 102) CATGCATG 1 chr2L:8686168-8686288 ( 86) CATCGCTA 1 chr3R:22491543-22491663 ( 108) GAACCCTG 1 chr2R:23851049-23851169 ( 35) GAGGGATG 1 chr3L:19646454-19646574 ( 15) GAGGGATG 1 chrX:9106550-9106670 ( 82) TAGGGATG 1 chr3R:18980883-18981003 ( 60) TAGGGATG 1 chr3R:27954079-27954199 ( 63) GAGCGCTT 1 chr3R:11822451-11822571 ( 48) CAGGGATA 1 chr3R:17040582-17040702 ( 67) CATCCCTT 1 chr3L:3435112-3435232 ( 112) CAACCCTA 1 chrX:11579009-11579129 ( 80) TAGGGCTA 1 chr2R:13239450-13239570 ( 62) CAGGGATA 1 chr3R:19229343-19229463 ( 67) TAGCCCTT 1 chrX:7735523-7735643 ( 74) CAGGGATA 1 chr2R:24661430-24661550 ( 67) TACCCCTG 1 chr2R:24687377-24687497 ( 82) CACCCCTA 1 chr2R:22420962-22421082 ( 81) TAGCCCGG 1 chrX:18479970-18480090 ( 28) CAACCCTT 1 chr2R:24668507-24668627 ( 75) CAGGGATT 1 chr2R:12279256-12279376 ( 57) TACGCCTG 1 chr2R:16221782-16221902 ( 42) CAGGGAGG 1 chr3L:17804675-17804795 ( 32) CAGTGCTA 1 chrX:16426581-16426701 ( 52) AAGCCCTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.59663 E= 1.2e-192 -363 198 -161 -178 177 -547 -551 -1439 -226 -248 193 -170 -1439 137 104 -362 -595 132 116 -1439 -157 207 -393 -436 -496 -447 -293 173 -171 -1439 199 -225 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 214 E= 1.2e-192 0.023364 0.822430 0.070093 0.084112 0.990654 0.004673 0.004673 0.000000 0.060748 0.037383 0.813084 0.088785 0.000000 0.537383 0.439252 0.023364 0.004673 0.518692 0.476636 0.000000 0.098131 0.873832 0.014019 0.014019 0.009346 0.009346 0.028037 0.953271 0.088785 0.000000 0.850467 0.060748 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGSSCTG MEME-1 regular expression -------------------------------------------------------------------------------- CAG[CG][CG]CTG -------------------------------------------------------------------------------- Time 7.33 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-2 width = 8 sites = 69 llr = 570 E-value = 2.8e-024 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 391::a:8 pos.-specific C :::a:::: probability G ::::a::: matrix T 7:9:::a1 bits 2.3 ** 2.0 ** 1.8 ** 1.6 **** Relative 1.4 * **** Entropy 1.1 ****** (11.9 bits) 0.9 ******* 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:11822451-11822571 31 2.58e-05 TTTGCACTGT TATCGATA GTCTAGGACC chr2R:22420344-22420464 27 2.58e-05 ACTTGGTGAC TATCGATA ACGAACCGGA chr2L:1177597-1177717 86 2.58e-05 ATCGGTCAGT TATCGATA ACTGGCAGTC chrX:13154912-13155032 90 2.58e-05 CTGCCGGAAC TATCGATA GCTTCTTTTA chr2L:5325020-5325140 16 2.58e-05 ACTATTTTGT TATCGATA TCTATGCAGC chr2L:271705-271825 86 2.58e-05 CTGCCCTGGT TATCGATA TTATTCCCCG chrX:22482307-22482427 54 2.58e-05 AAAGTCCGGT TATCGATA TCTGACGTCA chrX:8407220-8407340 103 2.58e-05 TGGGATACGT TATCGATA ACGTTACATT chrX:2172443-2172563 12 2.58e-05 TCGCGATAGT TATCGATA AGTATATCAA chr3R:17040582-17040702 86 2.58e-05 TTTGTCGATA TATCGATA GGCTGGCCAA chr2L:1752061-1752181 90 2.58e-05 CGCAGCGATA TATCGATA TGTGTCTGTC chr2R:24561015-24561135 69 2.58e-05 GAGTTGAGTC TATCGATA GGGCGATAGG chr3R:26876576-26876696 5 2.58e-05 CATC TATCGATA GTTTCCGCCA chr3L:8956738-8956858 76 2.58e-05 CCTGGCTGTT TATCGATA AACTGCTCAC chr2R:24664346-24664466 35 2.58e-05 ACGGCTACAC TATCGATA TAAATTGTTA chr2L:4382671-4382791 101 2.58e-05 ATCGAGCGCT TATCGATA TCAAACGCTG chr2L:19064857-19064977 11 2.58e-05 GTACTAATGT TATCGATA TGTTGACTAA chr3L:4406068-4406188 47 2.58e-05 AGCGGGCTCT TATCGATA GCGCAAATAA chr3L:7094204-7094324 69 2.58e-05 GATAGAAAAC TATCGATA TCTATTTAAC chr2L:560336-560456 79 2.58e-05 TTGGATAAAA TATCGATA AGCAGTGCCT chr3R:7643669-7643789 70 2.58e-05 GATAACGCGC TATCGATA TCTCAGGGGT chr3R:29202567-29202687 67 2.58e-05 CTGGAAAACC TATCGATA AATAAAAAGC chrX:6687417-6687537 57 2.58e-05 TTGCATGCGT TATCGATA TCGCCTGCCA chr2R:20308805-20308925 95 5.18e-05 TTACCAAACT AATCGATA TCACTGCCAT chr2R:23988449-23988569 24 5.18e-05 TCTAGGCAGC AATCGATA CCCAGAGCCA chr2R:14503850-14503970 46 5.18e-05 CTGATCGTTC AATCGATA GTTGGCAGCC chrX:21035365-21035485 59 5.18e-05 TGGGTATCGT AATCGATA GTTGCGAAAT chr2R:18094876-18094996 59 5.18e-05 CAAGCCTAAA AATCGATA GTATCGAATA chr3R:22491543-22491663 86 5.18e-05 TATCGATGGT AATCGATA ACCGATTGTT chr2L:16679999-16680119 33 5.18e-05 TTACTGGAGA AATCGATA GCTTGCACTG chr3L:17847015-17847135 15 5.18e-05 TCACCAAAAC AATCGATA GCATCGCGGC chr3R:9334650-9334770 109 5.18e-05 TGCTGAAACA AATCGATA GCAA chr3R:18667798-18667918 5 5.18e-05 TGAC AATCGATA ATAGCGGATG chrX:13612019-13612139 35 5.18e-05 GTTATCGGCA AATCGATA GTTTCCAGGG chr3L:9679081-9679201 70 5.18e-05 GAAACTTGCC AATCGATA GGCGATTGTA chr2R:24661430-24661550 2 5.18e-05 T AATCGATA AGTGCTTTGC chr2R:22420962-22421082 35 5.18e-05 GCGACTTAAC AATCGATA GATTTCGATA chr3R:27954079-27954199 79 7.74e-05 TTTGGTGGTC TATCGATT GTATTTTTTT chr2L:3862607-3862727 23 7.74e-05 TTTCAAATAT TATCGATT GGTATCGAGA chr2R:20308603-20308723 80 7.74e-05 TGTTTCAAAA TATCGATT GTTGATGTAA chr2R:16221782-16221902 29 7.74e-05 GTCGCCTGGC TATCGATT TGACCCAGGG chr2L:7810699-7810819 60 7.74e-05 CACACGAAAG TATCGATT AAATGCTCGA chr2R:23851049-23851169 76 7.74e-05 ACCTATCGGA TATCGATT GATGGTCGAT chr3R:27283731-27283851 19 7.74e-05 AGCCATCGAT TATCGATT ACCGCGCAAT chr3L:1318315-1318435 66 1.22e-04 TTAAACCCGA TAACGATA GCTTCGCTTC chr3R:10121667-10121787 89 1.22e-04 AAAAAAAAAA CATCGATA AAAAGACACG chr3L:9838644-9838764 30 1.22e-04 TGTCTCCCGA TAACGATA ACACAGCCTT chr3R:9335116-9335236 6 1.22e-04 GACAA CATCGATA GCACTTGTTG chr3R:28696120-28696240 40 1.22e-04 TTTAAATATT TAACGATA GCTAACTTGA chr3R:19229343-19229463 40 1.22e-04 TTTTTGTCGA TAACGATA GGCGTTAAGT chrX:9085816-9085936 78 1.22e-04 CCAACCAACT CATCGATA GCTCTTCGAT chrX:15701179-15701299 100 1.22e-04 TTTTGATGTC TAACGATA AATTTTGTGT chr2R:24197712-24197832 107 1.67e-04 CTGGGCCAGC TGTCGATA ACTTGC chrX:5876785-5876905 75 1.67e-04 ATGTCCAGAT AATCGATT ATTAATCGGT chr2R:7791320-7791440 64 1.67e-04 GGTTGATGCT AATCGATT CAATTCTGTA chr2R:10468525-10468645 76 2.11e-04 ACCGATTGCA TATCGAAA CGAGGGCTGC chrX:13370935-13371055 25 2.11e-04 TATCGCCGTC TATCGAAA GTTTGGCTGC chrX:15785513-15785633 111 2.11e-04 TGGGATACGT TATCGAAA AC chrX:19762329-19762449 26 2.11e-04 AGCGCGGACC TATCGATC GACAGCTCGT chr2L:10976348-10976468 74 2.11e-04 GAGCACTAGT TATCGATC GGCGGATAAA chr2R:10886708-10886828 21 2.30e-04 AGTGCCTGCT TACCGATA GACGCTGTAT chr3L:8966733-8966853 100 2.56e-04 CTCAGTGCGA AAACGATA GAAGGCTACG chr2L:21154030-21154150 1 2.82e-04 . TTTCGATA ACGTATCCCA chrX:22471991-22472111 16 2.82e-04 GGCTATCGGT TTTCGATA ACTGAGAAAA chr3R:28897452-28897572 16 3.01e-04 TGAAGTGTCA AGTCGATA AATAGGAAGA chrX:16422210-16422330 81 3.01e-04 ACTCGATTCT AGTCGATA GCTGTGCCCT chr2R:19129531-19129651 19 3.20e-04 CTTTGATAAT TATCGATG CACCGATTAC chr2R:24668304-24668424 81 3.83e-04 TCCCTGGTAT AACCGATA GAAAATGGGC chr3R:18980883-18981003 105 4.79e-04 AGCTGACCGT TATCGTTA TCGCCGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:11822451-11822571 2.6e-05 30_[+2]_82 chr2R:22420344-22420464 2.6e-05 26_[+2]_86 chr2L:1177597-1177717 2.6e-05 85_[+2]_27 chrX:13154912-13155032 2.6e-05 89_[+2]_23 chr2L:5325020-5325140 2.6e-05 15_[+2]_97 chr2L:271705-271825 2.6e-05 85_[+2]_27 chrX:22482307-22482427 2.6e-05 53_[+2]_59 chrX:8407220-8407340 2.6e-05 102_[+2]_10 chrX:2172443-2172563 2.6e-05 11_[+2]_101 chr3R:17040582-17040702 2.6e-05 85_[+2]_27 chr2L:1752061-1752181 2.6e-05 89_[+2]_23 chr2R:24561015-24561135 2.6e-05 68_[+2]_44 chr3R:26876576-26876696 2.6e-05 4_[+2]_108 chr3L:8956738-8956858 2.6e-05 75_[+2]_37 chr2R:24664346-24664466 2.6e-05 34_[+2]_78 chr2L:4382671-4382791 2.6e-05 100_[+2]_12 chr2L:19064857-19064977 2.6e-05 10_[+2]_102 chr3L:4406068-4406188 2.6e-05 46_[+2]_66 chr3L:7094204-7094324 2.6e-05 68_[+2]_44 chr2L:560336-560456 2.6e-05 78_[+2]_34 chr3R:7643669-7643789 2.6e-05 69_[+2]_43 chr3R:29202567-29202687 2.6e-05 66_[+2]_46 chrX:6687417-6687537 2.6e-05 56_[+2]_56 chr2R:20308805-20308925 5.2e-05 94_[+2]_18 chr2R:23988449-23988569 5.2e-05 23_[+2]_89 chr2R:14503850-14503970 5.2e-05 45_[+2]_67 chrX:21035365-21035485 5.2e-05 58_[+2]_54 chr2R:18094876-18094996 5.2e-05 58_[+2]_54 chr3R:22491543-22491663 5.2e-05 85_[+2]_27 chr2L:16679999-16680119 5.2e-05 32_[+2]_80 chr3L:17847015-17847135 5.2e-05 14_[+2]_98 chr3R:9334650-9334770 5.2e-05 108_[+2]_4 chr3R:18667798-18667918 5.2e-05 4_[+2]_108 chrX:13612019-13612139 5.2e-05 34_[+2]_78 chr3L:9679081-9679201 5.2e-05 69_[+2]_43 chr2R:24661430-24661550 5.2e-05 1_[+2]_111 chr2R:22420962-22421082 5.2e-05 34_[+2]_78 chr3R:27954079-27954199 7.7e-05 78_[+2]_34 chr2L:3862607-3862727 7.7e-05 22_[+2]_90 chr2R:20308603-20308723 7.7e-05 79_[+2]_33 chr2R:16221782-16221902 7.7e-05 28_[+2]_84 chr2L:7810699-7810819 7.7e-05 59_[+2]_53 chr2R:23851049-23851169 7.7e-05 75_[+2]_37 chr3R:27283731-27283851 7.7e-05 18_[+2]_94 chr3L:1318315-1318435 0.00012 65_[+2]_47 chr3R:10121667-10121787 0.00012 88_[+2]_24 chr3L:9838644-9838764 0.00012 29_[+2]_83 chr3R:9335116-9335236 0.00012 5_[+2]_107 chr3R:28696120-28696240 0.00012 39_[+2]_73 chr3R:19229343-19229463 0.00012 39_[+2]_73 chrX:9085816-9085936 0.00012 77_[+2]_35 chrX:15701179-15701299 0.00012 99_[+2]_13 chr2R:24197712-24197832 0.00017 106_[+2]_6 chrX:5876785-5876905 0.00017 74_[+2]_38 chr2R:7791320-7791440 0.00017 63_[+2]_49 chr2R:10468525-10468645 0.00021 75_[+2]_37 chrX:13370935-13371055 0.00021 24_[+2]_88 chrX:15785513-15785633 0.00021 110_[+2]_2 chrX:19762329-19762449 0.00021 25_[+2]_87 chr2L:10976348-10976468 0.00021 73_[+2]_39 chr2R:10886708-10886828 0.00023 20_[+2]_92 chr3L:8966733-8966853 0.00026 99_[+2]_13 chr2L:21154030-21154150 0.00028 [+2]_112 chrX:22471991-22472111 0.00028 15_[+2]_97 chr3R:28897452-28897572 0.0003 15_[+2]_97 chrX:16422210-16422330 0.0003 80_[+2]_32 chr2R:19129531-19129651 0.00032 18_[+2]_94 chr2R:24668304-24668424 0.00038 80_[+2]_32 chr3R:18980883-18981003 0.00048 104_[+2]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=69 chr3R:11822451-11822571 ( 31) TATCGATA 1 chr2R:22420344-22420464 ( 27) TATCGATA 1 chr2L:1177597-1177717 ( 86) TATCGATA 1 chrX:13154912-13155032 ( 90) TATCGATA 1 chr2L:5325020-5325140 ( 16) TATCGATA 1 chr2L:271705-271825 ( 86) TATCGATA 1 chrX:22482307-22482427 ( 54) TATCGATA 1 chrX:8407220-8407340 ( 103) TATCGATA 1 chrX:2172443-2172563 ( 12) TATCGATA 1 chr3R:17040582-17040702 ( 86) TATCGATA 1 chr2L:1752061-1752181 ( 90) TATCGATA 1 chr2R:24561015-24561135 ( 69) TATCGATA 1 chr3R:26876576-26876696 ( 5) TATCGATA 1 chr3L:8956738-8956858 ( 76) TATCGATA 1 chr2R:24664346-24664466 ( 35) TATCGATA 1 chr2L:4382671-4382791 ( 101) TATCGATA 1 chr2L:19064857-19064977 ( 11) TATCGATA 1 chr3L:4406068-4406188 ( 47) TATCGATA 1 chr3L:7094204-7094324 ( 69) TATCGATA 1 chr2L:560336-560456 ( 79) TATCGATA 1 chr3R:7643669-7643789 ( 70) TATCGATA 1 chr3R:29202567-29202687 ( 67) TATCGATA 1 chrX:6687417-6687537 ( 57) TATCGATA 1 chr2R:20308805-20308925 ( 95) AATCGATA 1 chr2R:23988449-23988569 ( 24) AATCGATA 1 chr2R:14503850-14503970 ( 46) AATCGATA 1 chrX:21035365-21035485 ( 59) AATCGATA 1 chr2R:18094876-18094996 ( 59) AATCGATA 1 chr3R:22491543-22491663 ( 86) AATCGATA 1 chr2L:16679999-16680119 ( 33) AATCGATA 1 chr3L:17847015-17847135 ( 15) AATCGATA 1 chr3R:9334650-9334770 ( 109) AATCGATA 1 chr3R:18667798-18667918 ( 5) AATCGATA 1 chrX:13612019-13612139 ( 35) AATCGATA 1 chr3L:9679081-9679201 ( 70) AATCGATA 1 chr2R:24661430-24661550 ( 2) AATCGATA 1 chr2R:22420962-22421082 ( 35) AATCGATA 1 chr3R:27954079-27954199 ( 79) TATCGATT 1 chr2L:3862607-3862727 ( 23) TATCGATT 1 chr2R:20308603-20308723 ( 80) TATCGATT 1 chr2R:16221782-16221902 ( 29) TATCGATT 1 chr2L:7810699-7810819 ( 60) TATCGATT 1 chr2R:23851049-23851169 ( 76) TATCGATT 1 chr3R:27283731-27283851 ( 19) TATCGATT 1 chr3L:1318315-1318435 ( 66) TAACGATA 1 chr3R:10121667-10121787 ( 89) CATCGATA 1 chr3L:9838644-9838764 ( 30) TAACGATA 1 chr3R:9335116-9335236 ( 6) CATCGATA 1 chr3R:28696120-28696240 ( 40) TAACGATA 1 chr3R:19229343-19229463 ( 40) TAACGATA 1 chrX:9085816-9085936 ( 78) CATCGATA 1 chrX:15701179-15701299 ( 100) TAACGATA 1 chr2R:24197712-24197832 ( 107) TGTCGATA 1 chrX:5876785-5876905 ( 75) AATCGATT 1 chr2R:7791320-7791440 ( 64) AATCGATT 1 chr2R:10468525-10468645 ( 76) TATCGAAA 1 chrX:13370935-13371055 ( 25) TATCGAAA 1 chrX:15785513-15785633 ( 111) TATCGAAA 1 chrX:19762329-19762449 ( 26) TATCGATC 1 chr2L:10976348-10976468 ( 74) TATCGATC 1 chr2R:10886708-10886828 ( 21) TACCGATA 1 chr3L:8966733-8966853 ( 100) AAACGATA 1 chr2L:21154030-21154150 ( 1) TTTCGATA 1 chrX:22471991-22472111 ( 16) TTTCGATA 1 chr3R:28897452-28897572 ( 16) AGTCGATA 1 chrX:16422210-16422330 ( 81) AGTCGATA 1 chr2R:19129531-19129651 ( 19) TATCGATG 1 chr2R:24668304-24668424 ( 81) AACCGATA 1 chr3R:18980883-18981003 ( 105) TATCGTTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.76027 E= 2.8e-024 0 -226 -1275 121 168 -1275 -229 -331 -174 -284 -1275 162 -1275 227 -1275 -1275 -1275 -1275 223 -1275 176 -1275 -1275 -431 -274 -1275 -1275 173 151 -284 -388 -114 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 69 E= 2.8e-024 0.289855 0.043478 0.000000 0.666667 0.927536 0.000000 0.043478 0.028986 0.086957 0.028986 0.000000 0.884058 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.985507 0.000000 0.000000 0.014493 0.043478 0.000000 0.000000 0.956522 0.826087 0.028986 0.014493 0.130435 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-2 regular expression -------------------------------------------------------------------------------- [TA]ATCGATA -------------------------------------------------------------------------------- Time 13.15 secs. ******************************************************************************** ******************************************************************************** MOTIF AWCAGCTG MEME-3 width = 8 sites = 49 llr = 443 E-value = 3.6e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 86:a1::: pos.-specific C 1:a::a:: probability G 11::9:1a matrix T :3::::9: bits 2.3 * * * 2.0 * * * 1.8 **** * 1.6 **** * Relative 1.4 ****** Entropy 1.1 * ****** (13.0 bits) 0.9 * ****** 0.7 * ****** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AACAGCTG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:24574479-24574599 83 1.38e-05 CGGCACACTA AACAGCTG ATTCGTTTCT chr2L:8686168-8686288 67 1.38e-05 TTCCGCGGCA AACAGCTG GCTGGCACTA chr2R:18426345-18426465 61 1.38e-05 ATCAACGTAA AACAGCTG TTTGCTTTGA chrX:16426581-16426701 39 1.38e-05 CATGAACGAT AACAGCTG TTCGGAAGCC chr2R:9865578-9865698 4 1.38e-05 TTG AACAGCTG ATTGGTGAAG chr2L:271705-271825 17 1.38e-05 GCGTGGAAGC AACAGCTG GCAAAACACA chr2L:1752061-1752181 65 1.38e-05 TGCGGGCGTG AACAGCTG TGGCTATCGC chr2L:17590046-17590166 40 1.38e-05 GGCGCTACCG AACAGCTG AGCATACGAG chr3R:26876576-26876696 39 1.38e-05 TAGCAGCAGA AACAGCTG GCTGAGCACC chr3R:14879347-14879467 77 1.38e-05 CGAGGGCTGC AACAGCTG AAGTCAGCTG chr3L:11623724-11623844 88 1.38e-05 CGACAAGCCG AACAGCTG AGCGATCGTC chr2L:13367515-13367635 109 1.38e-05 TCATTTTGTA AACAGCTG TTTC chr3R:17733501-17733621 92 1.38e-05 AGCCCTGGCG AACAGCTG GCTTTGAAAA chr2R:12423498-12423618 42 1.38e-05 CATCCGTGCG AACAGCTG TCAGATCAGC chr2R:24661430-24661550 81 1.38e-05 CCTGGTAGTA AACAGCTG ATACAATTTG chr3R:18980883-18981003 92 1.38e-05 CTATGCACAG AACAGCTG ACCGTTATCG chr2R:24668304-24668424 34 1.38e-05 TAACGAACAA AACAGCTG ATCGGCAAAA chr3L:9838644-9838764 14 2.75e-05 GATGCCGCCA ATCAGCTG TCTCCCGATA chr3L:7320006-7320126 64 2.75e-05 TGGTTCGCTT ATCAGCTG TTTGCCGGCA chr2R:7539676-7539796 45 2.75e-05 AGGCACTAAA ATCAGCTG ATCACGAAGC chr3R:28544753-28544873 60 2.75e-05 CGGAAATCAA ATCAGCTG TTTTACAGCG chr3R:13710781-13710901 95 2.75e-05 AACGCGTGTT ATCAGCTG TTCTTGTTGG chr2L:21154030-21154150 26 2.75e-05 CCACATCTTA ATCAGCTG TTCCAAGTAC chr2R:7463416-7463536 91 2.75e-05 AGCCCTGGAA ATCAGCTG TTGCTGGCGG chrX:15697386-15697506 76 2.75e-05 GCACTGCCGG ATCAGCTG ACTGACTTTT chr2R:24664346-24664466 86 2.75e-05 CTGGATCTAA ATCAGCTG TTGTGTTGTA chrX:2172443-2172563 99 3.76e-05 CGTAATTTCA AGCAGCTG ATATCGATTG chr3L:9679081-9679201 25 3.76e-05 AAAATTATAA AGCAGCTG ATTTTTGTTT chr2L:4385992-4386112 71 3.76e-05 ATTATATGAT AGCAGCTG CTGTTAAATT chr2R:22885990-22886110 15 4.75e-05 CAGCAGACGA CACAGCTG TAACTTTACT chrX:15785513-15785633 84 4.75e-05 TTGCACTTGG CACAGCTG AAAAAGATGT chr2R:24187562-24187682 60 5.77e-05 TCTGGAAGTA AACAGCGG CCAGGGCTCA chrX:18385214-18385334 101 5.77e-05 CGCTTCGGCT AACAGCGG GCTGTTGAGC chr3L:7604887-7605007 91 5.77e-05 ACAGCGCGCT AACAGCGG CTGGTGGCAC chr2R:14258941-14259061 88 8.75e-05 GAGGGGGACT CTCAGCTG ACTTTTCTGA chr3R:18667798-18667918 77 8.75e-05 AGCCCTGGCA ACCAGCTG TTCGGCGATG chrX:15450166-15450286 58 8.75e-05 CTCCAGCTGA ACCAGCTG CGTGGAACCA chr3L:4286957-4287077 94 8.75e-05 CGGTTCCACG GACAGCTG AGCAGGCATT chr3L:15509517-15509637 92 8.75e-05 AGCCCTGGCG CTCAGCTG TTCGTGCGGC chrX:18479764-18479884 43 8.75e-05 GCGATAGTTT GACAGCTG TCCCGAAACC chr3R:29858927-29859047 69 9.77e-05 ATGATAGACA ATCAGCGG TGGCGCAAAC chr3R:13011285-13011405 42 9.77e-05 GGATTCGCTG ATCAGCGG TCACACTTCT chr2L:1177597-1177717 40 1.16e-04 GGTGTTGGGA AACAACTG TTAGCTGGCA chrX:3965266-3965386 55 1.16e-04 AGGGCTGCGC AACAACTG AATAGGGTCA chrX:16786978-16787098 87 1.16e-04 GTTGTACTGC AACAACTG AATAAGATGT chr2R:15340362-15340482 68 1.26e-04 AGCCCTTGGG GTCAGCTG GTCACACTGG chr3R:26945369-26945489 19 1.45e-04 AAGAAATTAA ATCAACTG CTTATGCGGC chrX:16422210-16422330 20 1.45e-04 AAGTGAATTT ATCAACTG ACTTACCGCC chrX:15701179-15701299 52 1.52e-04 GCACAGGCGG CGCAGCTG AGCGGCCAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:24574479-24574599 1.4e-05 82_[+3]_30 chr2L:8686168-8686288 1.4e-05 66_[+3]_46 chr2R:18426345-18426465 1.4e-05 60_[+3]_52 chrX:16426581-16426701 1.4e-05 38_[+3]_74 chr2R:9865578-9865698 1.4e-05 3_[+3]_109 chr2L:271705-271825 1.4e-05 16_[+3]_96 chr2L:1752061-1752181 1.4e-05 64_[+3]_48 chr2L:17590046-17590166 1.4e-05 39_[+3]_73 chr3R:26876576-26876696 1.4e-05 38_[+3]_74 chr3R:14879347-14879467 1.4e-05 76_[+3]_36 chr3L:11623724-11623844 1.4e-05 87_[+3]_25 chr2L:13367515-13367635 1.4e-05 108_[+3]_4 chr3R:17733501-17733621 1.4e-05 91_[+3]_21 chr2R:12423498-12423618 1.4e-05 41_[+3]_71 chr2R:24661430-24661550 1.4e-05 80_[+3]_32 chr3R:18980883-18981003 1.4e-05 91_[+3]_21 chr2R:24668304-24668424 1.4e-05 33_[+3]_79 chr3L:9838644-9838764 2.7e-05 13_[+3]_99 chr3L:7320006-7320126 2.7e-05 63_[+3]_49 chr2R:7539676-7539796 2.7e-05 44_[+3]_68 chr3R:28544753-28544873 2.7e-05 59_[+3]_53 chr3R:13710781-13710901 2.7e-05 94_[+3]_18 chr2L:21154030-21154150 2.7e-05 25_[+3]_87 chr2R:7463416-7463536 2.7e-05 90_[+3]_22 chrX:15697386-15697506 2.7e-05 75_[+3]_37 chr2R:24664346-24664466 2.7e-05 85_[+3]_27 chrX:2172443-2172563 3.8e-05 98_[+3]_14 chr3L:9679081-9679201 3.8e-05 24_[+3]_88 chr2L:4385992-4386112 3.8e-05 70_[+3]_42 chr2R:22885990-22886110 4.7e-05 14_[+3]_98 chrX:15785513-15785633 4.7e-05 83_[+3]_29 chr2R:24187562-24187682 5.8e-05 59_[+3]_53 chrX:18385214-18385334 5.8e-05 100_[+3]_12 chr3L:7604887-7605007 5.8e-05 90_[+3]_22 chr2R:14258941-14259061 8.8e-05 87_[+3]_25 chr3R:18667798-18667918 8.8e-05 76_[+3]_36 chrX:15450166-15450286 8.8e-05 57_[+3]_55 chr3L:4286957-4287077 8.8e-05 93_[+3]_19 chr3L:15509517-15509637 8.8e-05 91_[+3]_21 chrX:18479764-18479884 8.8e-05 42_[+3]_70 chr3R:29858927-29859047 9.8e-05 68_[+3]_44 chr3R:13011285-13011405 9.8e-05 41_[+3]_71 chr2L:1177597-1177717 0.00012 39_[+3]_73 chrX:3965266-3965386 0.00012 54_[+3]_58 chrX:16786978-16787098 0.00012 86_[+3]_26 chr2R:15340362-15340482 0.00013 67_[+3]_45 chr3R:26945369-26945489 0.00015 18_[+3]_94 chrX:16422210-16422330 0.00015 19_[+3]_93 chrX:15701179-15701299 0.00015 51_[+3]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AWCAGCTG width=8 seqs=49 chr2R:24574479-24574599 ( 83) AACAGCTG 1 chr2L:8686168-8686288 ( 67) AACAGCTG 1 chr2R:18426345-18426465 ( 61) AACAGCTG 1 chrX:16426581-16426701 ( 39) AACAGCTG 1 chr2R:9865578-9865698 ( 4) AACAGCTG 1 chr2L:271705-271825 ( 17) AACAGCTG 1 chr2L:1752061-1752181 ( 65) AACAGCTG 1 chr2L:17590046-17590166 ( 40) AACAGCTG 1 chr3R:26876576-26876696 ( 39) AACAGCTG 1 chr3R:14879347-14879467 ( 77) AACAGCTG 1 chr3L:11623724-11623844 ( 88) AACAGCTG 1 chr2L:13367515-13367635 ( 109) AACAGCTG 1 chr3R:17733501-17733621 ( 92) AACAGCTG 1 chr2R:12423498-12423618 ( 42) AACAGCTG 1 chr2R:24661430-24661550 ( 81) AACAGCTG 1 chr3R:18980883-18981003 ( 92) AACAGCTG 1 chr2R:24668304-24668424 ( 34) AACAGCTG 1 chr3L:9838644-9838764 ( 14) ATCAGCTG 1 chr3L:7320006-7320126 ( 64) ATCAGCTG 1 chr2R:7539676-7539796 ( 45) ATCAGCTG 1 chr3R:28544753-28544873 ( 60) ATCAGCTG 1 chr3R:13710781-13710901 ( 95) ATCAGCTG 1 chr2L:21154030-21154150 ( 26) ATCAGCTG 1 chr2R:7463416-7463536 ( 91) ATCAGCTG 1 chrX:15697386-15697506 ( 76) ATCAGCTG 1 chr2R:24664346-24664466 ( 86) ATCAGCTG 1 chrX:2172443-2172563 ( 99) AGCAGCTG 1 chr3L:9679081-9679201 ( 25) AGCAGCTG 1 chr2L:4385992-4386112 ( 71) AGCAGCTG 1 chr2R:22885990-22886110 ( 15) CACAGCTG 1 chrX:15785513-15785633 ( 84) CACAGCTG 1 chr2R:24187562-24187682 ( 60) AACAGCGG 1 chrX:18385214-18385334 ( 101) AACAGCGG 1 chr3L:7604887-7605007 ( 91) AACAGCGG 1 chr2R:14258941-14259061 ( 88) CTCAGCTG 1 chr3R:18667798-18667918 ( 77) ACCAGCTG 1 chrX:15450166-15450286 ( 58) ACCAGCTG 1 chr3L:4286957-4287077 ( 94) GACAGCTG 1 chr3L:15509517-15509637 ( 92) CTCAGCTG 1 chrX:18479764-18479884 ( 43) GACAGCTG 1 chr3R:29858927-29859047 ( 69) ATCAGCGG 1 chr3R:13011285-13011405 ( 42) ATCAGCGG 1 chr2L:1177597-1177717 ( 40) AACAACTG 1 chrX:3965266-3965386 ( 55) AACAACTG 1 chrX:16786978-16787098 ( 87) AACAACTG 1 chr2R:15340362-15340482 ( 68) GTCAGCTG 1 chr3R:26945369-26945489 ( 19) ATCAACTG 1 chrX:16422210-16422330 ( 20) ATCAACTG 1 chrX:15701179-15701299 ( 52) CGCAGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.2866 E= 3.6e-022 153 -103 -180 -1226 92 -235 -139 18 -1226 227 -1226 -1226 178 -1226 -1226 -1226 -151 -1226 207 -1226 -1226 227 -1226 -1226 -1226 -1226 -106 164 -1226 -1226 223 -1226 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 49 E= 3.6e-022 0.836735 0.102041 0.061224 0.000000 0.551020 0.040816 0.081633 0.326531 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.102041 0.000000 0.897959 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.102041 0.897959 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWCAGCTG MEME-3 regular expression -------------------------------------------------------------------------------- A[AT]CAGCTG -------------------------------------------------------------------------------- Time 18.85 secs. ******************************************************************************** ******************************************************************************** MOTIF GBGTTGCC MEME-4 width = 8 sites = 20 llr = 197 E-value = 7.5e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :2:::::: pos.-specific C :4:3::aa probability G a3a::a:: matrix T :2:7a::: bits 2.3 * * *** 2.0 * * *** 1.8 * * **** 1.6 * * **** Relative 1.4 * * **** Entropy 1.1 * ****** (14.2 bits) 0.9 * ****** 0.7 * ****** 0.5 * ****** 0.2 ******** 0.0 -------- Multilevel GCGTTGCC consensus G C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:27958122-27958242 50 7.21e-06 TGTTGCGGTG GCGTTGCC AACCATCTCT chr4:980031-980151 42 7.21e-06 TGGGACTAAT GCGTTGCC CACGGTGGGA chr2R:19129531-19129651 74 7.21e-06 GCCCTGCATC GCGTTGCC AACGAAACGG chr3R:18166499-18166619 37 7.21e-06 GGCCGGTGGA GCGTTGCC AGACCGTCGC chr2L:6448484-6448604 38 7.21e-06 TTTAGCGGGG GCGTTGCC AGACCTTCTC chr2R:7931004-7931124 73 7.21e-06 AATTTATTCA GCGTTGCC ATATCAATTA chr2R:22895767-22895887 37 7.21e-06 TGAAACCTCG GCGTTGCC AGATCCGGAG chr3L:4169973-4170093 71 1.46e-05 CCTGGGAAGA GGGTTGCC TCTGCTTCAA chr2R:9865578-9865698 21 1.46e-05 GATTGGTGAA GGGTTGCC ACTCTTTCGT chrX:9106550-9106670 34 1.46e-05 CGGGTGTGTA GGGTTGCC AGACTGCTAA chr2R:16640851-16640971 38 1.46e-05 AGTGCCTCGA GGGTTGCC ACCGCACACC chr2L:15248438-15248558 15 2.51e-05 GCTTATTCTC GGGCTGCC AGATAGCTGA chr3R:17687021-17687141 82 2.51e-05 CGTAGAAATT GGGCTGCC AACTTGCTGT chrX:10854888-10855008 18 3.51e-05 GCGGCCAAGA GTGTTGCC ACCGCGTTGT chr3L:6994595-6994715 96 3.51e-05 AGGATGTTGG GTGTTGCC ATTTTGCTTT chr3L:2237179-2237299 97 4.52e-05 CCTCAAAGCA GAGTTGCC GTACAAATAG chrX:8407220-8407340 65 5.24e-05 GGGCTGGAAA GTGCTGCC TAGCAGTGTT chr3L:8966733-8966853 36 5.24e-05 ATTACTTATG GTGCTGCC AACCCAATCG chr2R:8333731-8333851 17 5.97e-05 GGTCTGGTCT GAGCTGCC TGGTCTGCTT chrX:1901885-1902005 78 5.97e-05 CATCGAGGGA GAGCTGCC ACCTTTTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:27958122-27958242 7.2e-06 49_[+4]_63 chr4:980031-980151 7.2e-06 41_[+4]_71 chr2R:19129531-19129651 7.2e-06 73_[+4]_39 chr3R:18166499-18166619 7.2e-06 36_[+4]_76 chr2L:6448484-6448604 7.2e-06 37_[+4]_75 chr2R:7931004-7931124 7.2e-06 72_[+4]_40 chr2R:22895767-22895887 7.2e-06 36_[+4]_76 chr3L:4169973-4170093 1.5e-05 70_[+4]_42 chr2R:9865578-9865698 1.5e-05 20_[+4]_92 chrX:9106550-9106670 1.5e-05 33_[+4]_79 chr2R:16640851-16640971 1.5e-05 37_[+4]_75 chr2L:15248438-15248558 2.5e-05 14_[+4]_98 chr3R:17687021-17687141 2.5e-05 81_[+4]_31 chrX:10854888-10855008 3.5e-05 17_[+4]_95 chr3L:6994595-6994715 3.5e-05 95_[+4]_17 chr3L:2237179-2237299 4.5e-05 96_[+4]_16 chrX:8407220-8407340 5.2e-05 64_[+4]_48 chr3L:8966733-8966853 5.2e-05 35_[+4]_77 chr2R:8333731-8333851 6e-05 16_[+4]_96 chrX:1901885-1902005 6e-05 77_[+4]_35 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GBGTTGCC width=8 seqs=20 chr3R:27958122-27958242 ( 50) GCGTTGCC 1 chr4:980031-980151 ( 42) GCGTTGCC 1 chr2R:19129531-19129651 ( 74) GCGTTGCC 1 chr3R:18166499-18166619 ( 37) GCGTTGCC 1 chr2L:6448484-6448604 ( 38) GCGTTGCC 1 chr2R:7931004-7931124 ( 73) GCGTTGCC 1 chr2R:22895767-22895887 ( 37) GCGTTGCC 1 chr3L:4169973-4170093 ( 71) GGGTTGCC 1 chr2R:9865578-9865698 ( 21) GGGTTGCC 1 chrX:9106550-9106670 ( 34) GGGTTGCC 1 chr2R:16640851-16640971 ( 38) GGGTTGCC 1 chr2L:15248438-15248558 ( 15) GGGCTGCC 1 chr3R:17687021-17687141 ( 82) GGGCTGCC 1 chrX:10854888-10855008 ( 18) GTGTTGCC 1 chr3L:6994595-6994715 ( 96) GTGTTGCC 1 chr3L:2237179-2237299 ( 97) GAGTTGCC 1 chrX:8407220-8407340 ( 65) GTGCTGCC 1 chr3L:8966733-8966853 ( 36) GTGCTGCC 1 chr2R:8333731-8333851 ( 17) GAGCTGCC 1 chrX:1901885-1902005 ( 78) GAGCTGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.4069 E= 7.5e-002 -1097 -1097 223 -1097 -95 75 49 -53 -1097 -1097 223 -1097 -1097 53 -1097 128 -1097 -1097 -1097 179 -1097 -1097 223 -1097 -1097 227 -1097 -1097 -1097 227 -1097 -1097 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 20 E= 7.5e-002 0.000000 0.000000 1.000000 0.000000 0.150000 0.350000 0.300000 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 0.300000 0.000000 0.700000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GBGTTGCC MEME-4 regular expression -------------------------------------------------------------------------------- G[CGT]G[TC]TGCC -------------------------------------------------------------------------------- Time 24.50 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGTATTT MEME-5 width = 8 sites = 22 llr = 207 E-value = 1.9e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::9::: pos.-specific C 3::::::: probability G :9a::::: matrix T 71:a1aaa bits 2.3 * 2.0 * 1.8 *** *** 1.6 *** *** Relative 1.4 ******* Entropy 1.1 ******** (13.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGGTATTT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:19094896-19095016 86 2.61e-05 CCACATTATG TGGTATTT TCCCCAGCTC chr2R:24574479-24574599 30 2.61e-05 CAAAGAATTT TGGTATTT TTTTTTAACT chr2L:15248438-15248558 47 2.61e-05 AGTTTGATGT TGGTATTT TTAAATGAAG chr2R:17548649-17548769 11 2.61e-05 ACATTTATTT TGGTATTT TCAATTATTT chrX:8407220-8407340 42 2.61e-05 GTAGATGTCT TGGTATTT TTCCAGGGCT chr3R:18667798-18667918 21 2.61e-05 TAATAGCGGA TGGTATTT TTCTGCTTGT chrX:15785513-15785633 35 2.61e-05 GTAGATGTCT TGGTATTT TTCCAGGGCT chr2L:9699682-9699802 94 2.61e-05 CAGTCTTATT TGGTATTT CCGAACCACC chr2L:13367515-13367635 82 2.61e-05 CTGGTTTATC TGGTATTT TGCGTACCTT chrX:16786978-16787098 39 2.61e-05 GTAGATTTTT TGGTATTT TTCCAGGGCT chr3L:13040983-13041103 86 2.61e-05 CTGGCAATTA TGGTATTT CTTTCAGGAT chr3L:13997127-13997247 56 2.61e-05 TTGCGCCAAT TGGTATTT TTCTGTTTTG chr3R:9335116-9335236 30 4.49e-05 GTTGCTCTAT CGGTATTT GCTACTTTTG chr2R:8333731-8333851 103 4.49e-05 AGTGTTTTTA CGGTATTT GTTGGCTCAA chrX:18137052-18137172 89 4.49e-05 CATACTGGTT CGGTATTT TTAAGAAGAA chrX:6533890-6534010 82 4.49e-05 AGATGCAGTG CGGTATTT TCATCCGGCC chrX:644634-644754 43 4.49e-05 GAATCTCCAC CGGTATTT CTTCTTTCTA chrX:16598516-16598636 55 4.49e-05 TATCGACTAG CGGTATTT ATTTTCCAGC chrX:4139214-4139334 108 7.08e-05 GATTATCTGT TGGTTTTT TTCGA chr3R:26876576-26876696 90 7.08e-05 TTTTGCTGTT TGGTTTTT AACAAATTTC chr2R:24687377-24687497 93 1.06e-04 ACCCCTACTT TTGTATTT CCATGGGGCT chrX:22471991-22472111 106 1.06e-04 TTCTACGCAT TTGTATTT CTCAACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:19094896-19095016 2.6e-05 85_[+5]_27 chr2R:24574479-24574599 2.6e-05 29_[+5]_83 chr2L:15248438-15248558 2.6e-05 46_[+5]_66 chr2R:17548649-17548769 2.6e-05 10_[+5]_102 chrX:8407220-8407340 2.6e-05 41_[+5]_71 chr3R:18667798-18667918 2.6e-05 20_[+5]_92 chrX:15785513-15785633 2.6e-05 34_[+5]_78 chr2L:9699682-9699802 2.6e-05 93_[+5]_19 chr2L:13367515-13367635 2.6e-05 81_[+5]_31 chrX:16786978-16787098 2.6e-05 38_[+5]_74 chr3L:13040983-13041103 2.6e-05 85_[+5]_27 chr3L:13997127-13997247 2.6e-05 55_[+5]_57 chr3R:9335116-9335236 4.5e-05 29_[+5]_83 chr2R:8333731-8333851 4.5e-05 102_[+5]_10 chrX:18137052-18137172 4.5e-05 88_[+5]_24 chrX:6533890-6534010 4.5e-05 81_[+5]_31 chrX:644634-644754 4.5e-05 42_[+5]_70 chrX:16598516-16598636 4.5e-05 54_[+5]_58 chrX:4139214-4139334 7.1e-05 107_[+5]_5 chr3R:26876576-26876696 7.1e-05 89_[+5]_23 chr2R:24687377-24687497 0.00011 92_[+5]_20 chrX:22471991-22472111 0.00011 105_[+5]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGTATTT width=8 seqs=22 chr3R:19094896-19095016 ( 86) TGGTATTT 1 chr2R:24574479-24574599 ( 30) TGGTATTT 1 chr2L:15248438-15248558 ( 47) TGGTATTT 1 chr2R:17548649-17548769 ( 11) TGGTATTT 1 chrX:8407220-8407340 ( 42) TGGTATTT 1 chr3R:18667798-18667918 ( 21) TGGTATTT 1 chrX:15785513-15785633 ( 35) TGGTATTT 1 chr2L:9699682-9699802 ( 94) TGGTATTT 1 chr2L:13367515-13367635 ( 82) TGGTATTT 1 chrX:16786978-16787098 ( 39) TGGTATTT 1 chr3L:13040983-13041103 ( 86) TGGTATTT 1 chr3L:13997127-13997247 ( 56) TGGTATTT 1 chr3R:9335116-9335236 ( 30) CGGTATTT 1 chr2R:8333731-8333851 ( 103) CGGTATTT 1 chrX:18137052-18137172 ( 89) CGGTATTT 1 chrX:6533890-6534010 ( 82) CGGTATTT 1 chrX:644634-644754 ( 43) CGGTATTT 1 chrX:16598516-16598636 ( 55) CGGTATTT 1 chrX:4139214-4139334 ( 108) TGGTTTTT 1 chr3R:26876576-26876696 ( 90) TGGTTTTT 1 chr2R:24687377-24687497 ( 93) TTGTATTT 1 chrX:22471991-22472111 ( 106) TTGTATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6807 E= 1.9e+001 -1110 39 -1110 133 -1110 -1110 209 -166 -1110 -1110 223 -1110 -1110 -1110 -1110 179 165 -1110 -1110 -166 -1110 -1110 -1110 179 -1110 -1110 -1110 179 -1110 -1110 -1110 179 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 22 E= 1.9e+001 0.000000 0.272727 0.000000 0.727273 0.000000 0.000000 0.909091 0.090909 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.909091 0.000000 0.000000 0.090909 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGTATTT MEME-5 regular expression -------------------------------------------------------------------------------- [TC]GGTATTT -------------------------------------------------------------------------------- Time 30.06 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:7013223-7013343 4.52e-02 62_[+1(7.31e-05)]_50 chrX:336765-336885 3.34e-02 120 chr2R:22895767-22895887 1.81e-03 36_[+4(7.21e-06)]_76 chrX:6687417-6687537 6.34e-04 32_[+1(2.91e-05)]_16_[+2(2.58e-05)]_\ 56 chr2L:11086526-11086646 5.26e-02 41_[+1(7.31e-05)]_71 chr3R:29202567-29202687 6.18e-03 66_[+2(2.58e-05)]_46 chr2R:22420962-22421082 6.38e-02 34_[+2(5.18e-05)]_78 chr2R:7931004-7931124 7.92e-04 42_[+1(2.91e-05)]_22_[+4(7.21e-06)]_\ 40 chr2L:9089686-9089806 1.96e-02 108_[+1(7.09e-06)]_4 chr3R:7643669-7643789 4.40e-04 69_[+2(2.58e-05)]_43 chrX:22471991-22472111 1.88e-04 52_[+1(2.91e-05)]_60 chrX:15701179-15701299 1.74e-04 34_[+1(2.91e-05)]_78 chr2L:560336-560456 1.80e-03 53_[+1(2.91e-05)]_17_[+2(2.58e-05)]_\ 34 chr3R:30583679-30583799 3.87e-01 120 chr2L:6448484-6448604 2.54e-03 37_[+4(7.21e-06)]_18_[+1(2.91e-05)]_\ 49 chrX:1901885-1902005 3.99e-03 50_[+1(7.31e-05)]_19_[+4(5.97e-05)]_\ 35 chr2R:17140882-17141002 1.40e-01 120 chr2R:24668304-24668424 6.25e-04 33_[+3(1.38e-05)]_27_[+1(7.31e-05)]_\ 44 chr3R:22492921-22493041 4.68e-02 120 chr3R:15249847-15249967 1.95e-02 34_[+1(7.09e-06)]_45_[+1(7.09e-06)]_\ 25 chr3L:1313039-1313159 1.72e-01 120 chrX:658181-658301 3.06e-01 120 chr3R:18980883-18981003 2.45e-03 91_[+3(1.38e-05)]_21 chr3L:13997127-13997247 3.01e-03 34_[+1(7.31e-05)]_13_[+5(2.61e-05)]_\ 57 chr3R:27283731-27283851 2.12e-03 18_[+2(7.74e-05)]_37_[+1(3.63e-05)]_\ 49 chr3L:6994595-6994715 3.47e-03 64_[+4(5.97e-05)]_23_[+4(3.51e-05)]_\ 17 chr3L:8966733-8966853 5.58e-03 35_[+4(5.24e-05)]_77 chr3L:13040983-13041103 3.06e-05 70_[+1(7.09e-06)]_7_[+5(2.61e-05)]_\ 27 chrX:10621777-10621897 6.39e-02 38_[+1(2.91e-05)]_74 chr2R:24661430-24661550 2.71e-04 1_[+2(5.18e-05)]_71_[+3(1.38e-05)]_\ 32 chr2L:10976348-10976468 9.23e-03 55_[+1(2.91e-05)]_57 chr2L:11100849-11100969 3.82e-02 120 chr2L:4385992-4386112 1.48e-02 70_[+3(3.76e-05)]_42 chrX:9085816-9085936 4.11e-02 120 chr2R:12423498-12423618 1.79e-04 41_[+3(1.38e-05)]_4_[+3(2.75e-05)]_\ 10_[+1(7.09e-06)]_41 chr2R:22874604-22874724 4.67e-03 106_[+1(7.09e-06)]_6 chrX:18479764-18479884 1.38e-03 42_[+3(8.75e-05)]_9_[+1(2.91e-05)]_\ 53 chr3L:16595040-16595160 4.24e-03 30_[+1(2.91e-05)]_82 chr3L:19646454-19646574 2.60e-01 120 chr2R:12201114-12201234 5.78e-02 120 chr3R:22753069-22753189 4.93e-03 56_[+1(2.91e-05)]_56 chr2R:23851049-23851169 5.12e-02 75_[+2(7.74e-05)]_37 chr2R:7791320-7791440 1.24e-03 46_[+1(7.09e-06)]_66 chr3R:17733501-17733621 3.24e-04 80_[+1(7.09e-06)]_3_[+3(1.38e-05)]_\ 21 chr3L:7094204-7094324 3.40e-02 68_[+2(2.58e-05)]_44 chrX:7735523-7735643 6.58e-01 120 chr3L:4406068-4406188 5.00e-03 46_[+2(2.58e-05)]_66 chr3L:15509517-15509637 2.01e-04 80_[+1(7.09e-06)]_3_[+3(8.75e-05)]_\ 21 chr2L:6723810-6723930 1.36e-01 120 chr3R:19044771-19044891 7.38e-01 120 chr2L:19064857-19064977 1.30e-02 10_[+2(2.58e-05)]_57_[+2(5.18e-05)]_\ 37 chr3R:19229343-19229463 8.08e-02 120 chr3L:6943752-6943872 6.32e-03 64_[+1(7.09e-06)]_48 chr3R:17687021-17687141 4.34e-02 81_[+4(2.51e-05)]_31 chr3R:20551510-20551630 2.65e-01 120 chr3L:11836831-11836951 1.78e-01 120 chr2L:4382671-4382791 5.36e-04 100_[+2(2.58e-05)]_12 chr2L:13549599-13549719 1.79e-02 120 chrX:16422210-16422330 2.41e-03 120 chr2R:17737199-17737319 4.19e-03 46_[+1(2.91e-05)]_66 chr3R:7644562-7644682 9.10e-01 120 chr2R:24664346-24664466 1.27e-05 34_[+2(2.58e-05)]_28_[+1(7.09e-06)]_\ 7_[+3(2.75e-05)]_27 chrX:16786978-16787098 3.41e-05 38_[+5(2.61e-05)]_3_[+1(2.91e-05)]_\ 63 chr2R:16017096-16017216 9.83e-03 59_[+1(2.91e-05)]_53 chr3R:6149712-6149832 1.20e-02 36_[+1(7.09e-06)]_76 chr2L:13367515-13367635 1.44e-05 66_[+1(7.09e-06)]_7_[+5(2.61e-05)]_\ 19_[+3(1.38e-05)]_4 chr3L:11623724-11623844 6.15e-04 63_[+1(2.91e-05)]_16_[+3(1.38e-05)]_\ 25 chr3R:17807358-17807478 8.26e-01 120 chrX:16598516-16598636 7.30e-04 54_[+5(4.49e-05)]_58 chrX:6039575-6039695 9.27e-01 120 chrX:644634-644754 4.82e-04 42_[+5(4.49e-05)]_30_[+1(2.91e-05)]_\ 32 chr2L:1728681-1728801 9.53e-03 39_[+1(2.91e-05)]_73 chr2R:15340362-15340482 5.58e-02 120 chr2L:21104472-21104592 7.14e-02 65_[+1(7.31e-05)]_47 chr3L:4286957-4287077 1.09e-03 67_[+1(7.09e-06)]_18_[+3(8.75e-05)]_\ 19 chrX:15697386-15697506 3.46e-03 75_[+3(2.75e-05)]_37 chrX:684778-684898 1.03e-02 38_[+1(2.91e-05)]_74 chrX:6533890-6534010 6.23e-03 81_[+5(4.49e-05)]_31 chr3R:13382714-13382834 6.17e-04 51_[+1(2.91e-05)]_61 chr2R:7463416-7463536 1.54e-03 79_[+1(7.09e-06)]_3_[+3(2.75e-05)]_\ 22 chrX:19579252-19579372 2.66e-01 120 chr2L:6920245-6920365 4.00e-01 120 chr3L:8956738-8956858 2.76e-05 61_[+1(7.09e-06)]_6_[+2(2.58e-05)]_\ 37 chr3R:14879347-14879467 3.59e-04 76_[+3(1.38e-05)]_36 chrX:19762329-19762449 1.86e-04 48_[+1(7.09e-06)]_64 chr2R:18094669-18094789 1.97e-02 37_[+1(2.91e-05)]_75 chr3L:16613052-16613172 3.93e-02 120 chrX:16598719-16598839 8.34e-01 120 chr2L:8685962-8686082 6.28e-01 120 chr3R:26876576-26876696 1.80e-07 4_[+2(2.58e-05)]_26_[+3(1.38e-05)]_\ 9_[+1(2.91e-05)]_26_[+5(7.08e-05)]_23 chr2R:13239450-13239570 3.09e-01 120 chr2R:24561015-24561135 2.10e-04 51_[+1(7.09e-06)]_9_[+2(2.58e-05)]_\ 44 chr2R:16640851-16640971 2.85e-04 37_[+4(1.46e-05)]_75 chr3R:28696120-28696240 2.74e-03 61_[+1(2.91e-05)]_51 chrX:5876785-5876905 8.05e-02 120 chr3L:9679081-9679201 2.00e-04 24_[+3(3.76e-05)]_37_[+2(5.18e-05)]_\ 43 chr2L:9699682-9699802 6.12e-04 93_[+5(2.61e-05)]_19 chr4:253300-253420 3.83e-01 120 chr2L:17590046-17590166 6.69e-04 39_[+3(1.38e-05)]_73 chr2L:12712393-12712513 7.37e-02 120 chrX:11579009-11579129 1.17e-01 120 chrX:15785513-15785633 1.59e-06 34_[+5(2.61e-05)]_3_[+1(2.91e-05)]_\ 30_[+3(4.75e-05)]_29 chr2L:1752061-1752181 2.55e-07 33_[+4(2.51e-05)]_23_[+3(1.38e-05)]_\ 17_[+2(2.58e-05)]_23 chr3L:8109040-8109160 3.33e-02 69_[+1(7.09e-06)]_43 chr2L:21154030-21154150 2.66e-04 25_[+3(2.75e-05)]_19_[+1(7.09e-06)]_\ 60 chr3L:3435112-3435232 1.06e-01 120 chrX:13612019-13612139 2.31e-03 34_[+2(5.18e-05)]_78 chr2R:12279256-12279376 4.48e-01 120 chr2R:5663201-5663321 1.41e-02 69_[+1(7.09e-06)]_43 chr2L:23512807-23512927 1.00e+00 120 chr3R:12972269-12972389 1.60e-02 54_[+1(2.91e-05)]_58 chr3L:247461-247581 1.37e-01 120 chrX:644083-644203 1.95e-02 97_[+1(2.91e-05)]_15 chrX:2052122-2052242 9.85e-01 120 chr3R:31220600-31220720 2.06e-02 78_[+1(7.09e-06)]_34 chrX:15450166-15450286 2.46e-03 57_[+3(8.75e-05)]_15_[+1(7.31e-05)]_\ 32 chr2R:24574269-24574389 6.71e-02 11_[+1(7.09e-06)]_101 chr2R:24668507-24668627 1.21e-01 120 chrX:9106550-9106670 5.25e-02 33_[+4(1.46e-05)]_79 chr2L:9963855-9963975 6.45e-01 120 chr3R:17040582-17040702 9.37e-03 85_[+2(2.58e-05)]_27 chr2R:25190573-25190693 1.51e-01 120 chrX:18367856-18367976 3.30e-02 120 chr3R:13710781-13710901 9.17e-05 57_[+1(7.09e-06)]_29_[+3(2.75e-05)]_\ 18 chrX:2172443-2172563 6.46e-04 11_[+2(2.58e-05)]_51_[+2(7.74e-05)]_\ 20_[+3(3.76e-05)]_1_[+2(7.74e-05)]_5 chr3R:18667798-18667918 7.30e-07 4_[+2(5.18e-05)]_8_[+5(2.61e-05)]_\ 37_[+1(7.09e-06)]_3_[+3(8.75e-05)]_22_[+5(7.08e-05)]_6 chrX:8407220-8407340 1.50e-06 41_[+5(2.61e-05)]_3_[+1(2.91e-05)]_\ 4_[+4(5.24e-05)]_30_[+2(2.58e-05)]_10 chrX:22482307-22482427 1.01e-03 53_[+2(2.58e-05)]_8_[+1(2.91e-05)]_\ 43 chr2R:24197712-24197832 3.51e-03 120 chrX:18479970-18480090 5.34e-01 120 chrX:23005200-23005320 6.48e-03 63_[+1(7.09e-06)]_49 chrX:10854888-10855008 2.01e-03 17_[+4(3.51e-05)]_49_[+1(2.91e-05)]_\ 38 chrX:18137052-18137172 2.79e-02 88_[+5(4.49e-05)]_24 chrX:3965266-3965386 3.07e-04 43_[+1(2.91e-05)]_69 chrX:12497001-12497121 7.26e-03 84_[+1(7.09e-06)]_28 chr2L:271705-271825 1.50e-06 16_[+3(1.38e-05)]_14_[+1(2.91e-05)]_\ 39_[+2(2.58e-05)]_27 chr2R:9865578-9865698 6.49e-06 3_[+3(1.38e-05)]_9_[+4(1.46e-05)]_\ 37_[+1(3.63e-05)]_47 chr3R:9334650-9334770 1.96e-02 108_[+2(5.18e-05)]_4 chr2L:7810699-7810819 9.10e-03 59_[+2(7.74e-05)]_53 chr3R:18167690-18167810 8.97e-03 58_[+1(7.09e-06)]_54 chr2R:8333731-8333851 3.47e-05 16_[+4(5.97e-05)]_31_[+1(7.09e-06)]_\ 39_[+5(4.49e-05)]_10 chr3L:17847015-17847135 2.48e-03 14_[+2(5.18e-05)]_41_[+1(7.09e-06)]_\ 49 chr2R:24779845-24779965 1.69e-01 120 chrX:7300403-7300523 4.04e-02 23_[+1(2.91e-05)]_24_[+1(2.91e-05)]_\ 57 chrX:13370935-13371055 2.65e-03 120 chr3R:28544753-28544873 1.63e-02 27_[+3(3.76e-05)]_24_[+3(2.75e-05)]_\ 53 chrX:16426581-16426701 1.42e-04 38_[+3(1.38e-05)]_74 chr2R:7539676-7539796 1.68e-03 44_[+3(2.75e-05)]_68 chr3L:18869621-18869741 3.88e-01 120 chr3R:26245820-26245940 1.91e-01 120 chr3R:21822662-21822782 3.13e-02 33_[+1(2.91e-05)]_79 chr3R:15857609-15857729 2.71e-02 92_[+1(7.09e-06)]_20 chr2R:17548649-17548769 5.45e-04 10_[+5(2.61e-05)]_27_[+1(2.91e-05)]_\ 67 chr3R:19632987-19633107 2.88e-01 120 chr2R:17792473-17792593 5.32e-03 120 chr3L:17804675-17804795 2.90e-01 120 chr2L:13813726-13813846 1.18e-02 69_[+1(2.91e-05)]_43 chr2R:18426345-18426465 5.64e-02 60_[+3(1.38e-05)]_52 chr2L:16679999-16680119 1.45e-03 32_[+2(5.18e-05)]_80 chrX:20433272-20433392 7.91e-02 120 chr3L:16595241-16595361 8.46e-01 120 chr2L:9437274-9437394 1.15e-01 120 chr3R:22491543-22491663 3.96e-02 85_[+2(5.18e-05)]_27 chr2L:18766381-18766501 1.04e-01 17_[+1(2.91e-05)]_95 chr2R:22885990-22886110 1.69e-03 14_[+3(4.75e-05)]_52_[+1(7.31e-05)]_\ 38 chr2L:5325020-5325140 2.11e-03 15_[+2(2.58e-05)]_19_[+1(7.09e-06)]_\ 70 chr2L:15248438-15248558 2.90e-04 14_[+4(2.51e-05)]_24_[+5(2.61e-05)]_\ 66 chr3L:7320006-7320126 2.58e-03 47_[+1(7.31e-05)]_8_[+3(2.75e-05)]_\ 49 chr3L:7604887-7605007 2.72e-04 36_[+1(7.09e-06)]_46_[+3(5.77e-05)]_\ 22 chr3R:9335116-9335236 7.43e-05 29_[+5(4.49e-05)]_17_[+1(7.31e-05)]_\ 58 chr2L:10321133-10321253 7.90e-01 120 chrX:13154912-13155032 1.15e-02 89_[+2(2.58e-05)]_23 chrX:4139214-4139334 7.85e-03 107_[+5(7.08e-05)]_5 chr2R:16221782-16221902 2.63e-02 28_[+2(7.74e-05)]_84 chr2R:18094876-18094996 7.20e-02 58_[+2(5.18e-05)]_12_[+2(7.74e-05)]_\ 34 chr2L:8686168-8686288 2.18e-02 66_[+3(1.38e-05)]_46 chr3L:4169973-4170093 1.12e-03 56_[+1(7.31e-05)]_6_[+4(1.46e-05)]_\ 42 chrX:21035365-21035485 8.06e-03 42_[+1(7.31e-05)]_8_[+2(5.18e-05)]_\ 54 chr2R:14503850-14503970 1.50e-03 45_[+2(5.18e-05)]_5_[+1(7.09e-06)]_\ 54 chr3R:26945369-26945489 4.14e-02 120 chr2R:10468525-10468645 1.03e-02 120 chr3L:11214420-11214540 1.80e-02 120 chr2R:23988449-23988569 1.45e-03 23_[+2(5.18e-05)]_28_[+1(2.91e-05)]_\ 53 chr2L:1177597-1177717 1.56e-04 62_[+1(7.31e-05)]_15_[+2(2.58e-05)]_\ 27 chr2R:20308603-20308723 9.80e-04 52_[+1(2.91e-05)]_19_[+2(7.74e-05)]_\ 33 chr2R:7541274-7541394 1.69e-02 69_[+1(7.09e-06)]_43 chr2R:10886708-10886828 2.34e-04 79_[+1(7.09e-06)]_33 chr3R:31743386-31743506 1.31e-02 44_[+1(7.09e-06)]_68 chr3R:19939111-19939231 3.04e-01 120 chr3R:18166499-18166619 2.60e-02 36_[+4(7.21e-06)]_76 chr2R:24976081-24976201 5.14e-01 120 chr2L:10333753-10333873 1.73e-02 41_[+4(7.23e-05)]_71 chr2L:4310542-4310662 1.20e-01 120 chr3L:11822210-11822330 1.36e-02 47_[+1(2.91e-05)]_65 chr3R:13676592-13676712 3.65e-03 55_[+1(7.09e-06)]_57 chr2R:14258941-14259061 5.02e-02 87_[+3(8.75e-05)]_25 chr2R:22420344-22420464 8.49e-02 26_[+2(2.58e-05)]_86 chr2L:10263521-10263641 2.53e-01 120 chr2L:8718521-8718641 4.27e-01 120 chr2R:10885145-10885265 2.82e-01 120 chr2R:16608770-16608890 3.40e-01 120 chr2L:10976597-10976717 9.76e-01 120 chrX:18385214-18385334 3.83e-04 42_[+1(2.91e-05)]_50_[+3(5.77e-05)]_\ 12 chr2R:24687377-24687497 9.92e-02 120 chrX:14841983-14842103 1.05e-02 41_[+1(7.09e-06)]_71 chrX:1349418-1349538 5.74e-01 120 chr2R:21073663-21073783 7.81e-01 120 chrX:7678933-7679053 1.06e-01 120 chr2R:13224581-13224701 2.94e-02 44_[+4(8.52e-05)]_68 chr3L:3219019-3219139 3.51e-01 74_[+1(7.31e-05)]_38 chr2R:24574479-24574599 1.25e-04 29_[+5(2.61e-05)]_45_[+3(1.38e-05)]_\ 30 chr3R:30394396-30394516 1.61e-02 120 chr3L:9838644-9838764 6.02e-04 13_[+3(2.75e-05)]_99 chr2L:5037376-5037496 3.50e-01 120 chr3R:19094896-19095016 2.99e-03 58_[+1(7.31e-05)]_19_[+5(2.61e-05)]_\ 27 chr3R:10121667-10121787 3.50e-03 63_[+1(7.31e-05)]_49 chr3R:11822451-11822571 2.35e-02 30_[+2(2.58e-05)]_82 chrX:22472192-22472312 2.28e-01 120 chr3R:25851260-25851380 3.71e-02 120 chr3R:31221151-31221271 1.17e-02 65_[+1(7.09e-06)]_47 chr3R:28897452-28897572 1.11e-01 120 chr3L:1318315-1318435 7.21e-03 120 chr3L:16602969-16603089 1.28e-02 107_[+1(7.09e-06)]_5 chr2L:10970342-10970462 8.85e-02 54_[+1(2.91e-05)]_58 chr2L:564051-564171 5.13e-01 120 chr3R:12422711-12422831 5.03e-03 64_[+1(7.09e-06)]_48 chr3R:13218881-13219001 6.65e-01 120 chr2R:21323970-21324090 2.49e-03 104_[+1(2.91e-05)]_8 chr2R:19129531-19129651 3.88e-05 61_[+1(7.09e-06)]_4_[+4(7.21e-06)]_\ 39 chr3R:8264404-8264524 1.45e-01 120 chr2R:24187562-24187682 5.52e-02 59_[+3(5.77e-05)]_53 chr2L:3862607-3862727 1.47e-02 22_[+2(7.74e-05)]_30_[+1(7.31e-05)]_\ 52 chr3R:16476632-16476752 8.50e-01 120 chr3L:14002025-14002145 9.15e-02 120 chr2R:20308805-20308925 1.50e-01 94_[+2(5.18e-05)]_18 chr3R:13011285-13011405 4.20e-05 41_[+3(9.77e-05)]_11_[+1(2.91e-05)]_\ 52 chrX:12749982-12750102 7.87e-01 120 chrX:19268832-19268952 2.95e-03 39_[+1(7.09e-06)]_21_[+1(2.91e-05)]_\ 27_[+1(1.44e-05)]_9 chr3L:21770324-21770444 3.13e-01 120 chr2L:12473765-12473885 8.64e-02 120 chr3L:9972640-9972760 3.51e-01 120 chr3R:29858927-29859047 3.46e-03 68_[+3(9.77e-05)]_44 chr2R:9692124-9692244 1.67e-02 76_[+4(8.52e-05)]_36 chr4:980031-980151 2.85e-04 41_[+4(7.21e-06)]_18_[+1(7.09e-06)]_\ 45 chr3R:27954079-27954199 9.11e-04 78_[+2(7.74e-05)]_34 chr3R:14711600-14711720 1.74e-01 120 chr3L:2237179-2237299 9.12e-03 96_[+4(4.52e-05)]_16 chr2R:16180198-16180318 3.27e-02 44_[+1(7.09e-06)]_68 chr3R:27958122-27958242 5.09e-03 49_[+4(7.21e-06)]_63 chr2R:10075598-10075718 2.74e-02 30_[+1(2.91e-05)]_82 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n02.farnam.hpc.yale.internal ********************************************************************************