******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG6813.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:515829-515949 1.0000 120 chr3R:22635132-22635252 1.0000 120 chr2R:11403180-11403300 1.0000 120 chr3R:29548902-29549022 1.0000 120 chr2R:15465952-15466072 1.0000 120 chr2R:23740381-23740501 1.0000 120 chr2R:9269501-9269621 1.0000 120 chrX:15497873-15497993 1.0000 120 chr2L:5610208-5610328 1.0000 120 chr2L:11961007-11961127 1.0000 120 chr3L:5785370-5785490 1.0000 120 chr3R:5746753-5746873 1.0000 120 chr2R:14314471-14314591 1.0000 120 chr2R:15249402-15249522 1.0000 120 chr3R:30062124-30062244 1.0000 120 chrX:6439625-6439745 1.0000 120 chr2L:16541769-16541889 1.0000 120 chr3L:1742819-1742939 1.0000 120 chr2R:18202726-18202846 1.0000 120 chr2R:12458253-12458373 1.0000 120 chr3R:12728398-12728518 1.0000 120 chr2R:22158071-22158191 1.0000 120 chr3L:18846311-18846431 1.0000 120 chr2L:5303741-5303861 1.0000 120 chr2R:21082672-21082792 1.0000 120 chr2L:1448305-1448425 1.0000 120 chr2L:425603-425723 1.0000 120 chr3L:15689699-15689819 1.0000 120 chr2R:6503149-6503269 1.0000 120 chr3L:14447075-14447195 1.0000 120 chr3L:3390608-3390728 1.0000 120 chrX:1183316-1183436 1.0000 120 chr2L:3549017-3549137 1.0000 120 chr3L:1489645-1489765 1.0000 120 chr2L:10497554-10497674 1.0000 120 chr3L:14274837-14274957 1.0000 120 chr3L:3755785-3755905 1.0000 120 chr2L:7166014-7166134 1.0000 120 chr3R:15354088-15354208 1.0000 120 chr2L:3228818-3228938 1.0000 120 chr3R:21271372-21271492 1.0000 120 chr2R:16820395-16820515 1.0000 120 chr2R:13723369-13723489 1.0000 120 chr3L:616268-616388 1.0000 120 chr3L:11253463-11253583 1.0000 120 chr3R:30489917-30490037 1.0000 120 chr2R:2262391-2262511 1.0000 120 chrX:3282115-3282235 1.0000 120 chr3L:16056368-16056488 1.0000 120 chr2L:18717527-18717647 1.0000 120 chr3R:27067512-27067632 1.0000 120 chr3R:31603821-31603941 1.0000 120 chr3L:11788306-11788426 1.0000 120 chr3L:14988406-14988526 1.0000 120 chr3L:4272340-4272460 1.0000 120 chr2L:2906262-2906382 1.0000 120 chr2R:9756256-9756376 1.0000 120 chr3R:14526803-14526923 1.0000 120 chr3R:8318002-8318122 1.0000 120 chr3R:10169229-10169349 1.0000 120 chr2L:9614072-9614192 1.0000 120 chr3L:13489340-13489460 1.0000 120 chr2R:9060152-9060272 1.0000 120 chr3R:19000019-19000139 1.0000 120 chr2L:15324193-15324313 1.0000 120 chr3R:22756403-22756523 1.0000 120 chrX:6720106-6720226 1.0000 120 chr2L:19998295-19998415 1.0000 120 chrX:18580806-18580926 1.0000 120 chr3R:23134840-23134960 1.0000 120 chr2R:18675656-18675776 1.0000 120 chrX:13645222-13645342 1.0000 120 chr2L:2864746-2864866 1.0000 120 chr3L:8347490-8347610 1.0000 120 chr2L:8576581-8576701 1.0000 120 chr3R:5320740-5320860 1.0000 120 chr2R:13532022-13532142 1.0000 120 chr2L:5113568-5113688 1.0000 120 chr3R:15402788-15402908 1.0000 120 chr3L:19845661-19845781 1.0000 120 chr2L:2861594-2861714 1.0000 120 chr3R:14472773-14472893 1.0000 120 chr3R:17818927-17819047 1.0000 120 chr2L:7427572-7427692 1.0000 120 chr3L:7859825-7859945 1.0000 120 chr3L:16488603-16488723 1.0000 120 chr3L:7367911-7368031 1.0000 120 chr2L:8165919-8166039 1.0000 120 chr3R:29480097-29480217 1.0000 120 chr2R:20999316-20999436 1.0000 120 chr3L:18021011-18021131 1.0000 120 chr3L:17656825-17656945 1.0000 120 chr2L:19937918-19938038 1.0000 120 chrX:768871-768991 1.0000 120 chr2R:24746023-24746143 1.0000 120 chr3R:15677783-15677903 1.0000 120 chr2L:17448602-17448722 1.0000 120 chr2R:19414607-19414727 1.0000 120 chr2R:23656719-23656839 1.0000 120 chr3L:15814144-15814264 1.0000 120 chr3R:24544469-24544589 1.0000 120 chr2L:7571925-7572045 1.0000 120 chr3R:9390356-9390476 1.0000 120 chr2R:23615226-23615346 1.0000 120 chr2R:6153464-6153584 1.0000 120 chr2L:4364994-4365114 1.0000 120 chr2L:6643575-6643695 1.0000 120 chr2L:10505034-10505154 1.0000 120 chr3L:18833392-18833512 1.0000 120 chr3L:14549345-14549465 1.0000 120 chr2R:18801204-18801324 1.0000 120 chr2L:16523224-16523344 1.0000 120 chr3R:6973358-6973478 1.0000 120 chr3R:12369925-12370045 1.0000 120 chr2L:5096967-5097087 1.0000 120 chr3L:8835028-8835148 1.0000 120 chr3L:17791602-17791722 1.0000 120 chr2L:892639-892759 1.0000 120 chrX:3967746-3967866 1.0000 120 chr2L:20840559-20840679 1.0000 120 chr2R:9266577-9266697 1.0000 120 chr3L:3134239-3134359 1.0000 120 chrX:4691345-4691465 1.0000 120 chr3L:15548938-15549058 1.0000 120 chrX:14727691-14727811 1.0000 120 chr2L:3555839-3555959 1.0000 120 chr2L:7828902-7829022 1.0000 120 chr3L:10862001-10862121 1.0000 120 chr3R:12657100-12657220 1.0000 120 chr3L:614871-614991 1.0000 120 chrX:5737226-5737346 1.0000 120 chr2R:22205680-22205800 1.0000 120 chr3R:11243209-11243329 1.0000 120 chr3R:28552395-28552515 1.0000 120 chrX:6592201-6592321 1.0000 120 chr3L:11107583-11107703 1.0000 120 chr3R:11869391-11869511 1.0000 120 chr3R:31549290-31549410 1.0000 120 chr3L:17419501-17419621 1.0000 120 chr2L:12509587-12509707 1.0000 120 chrX:14840761-14840881 1.0000 120 chr2R:8242615-8242735 1.0000 120 chr2L:12465843-12465963 1.0000 120 chr3L:643180-643300 1.0000 120 chr2L:22144249-22144369 1.0000 120 chr3R:6401064-6401184 1.0000 120 chr3R:14300090-14300210 1.0000 120 chr2L:19370198-19370318 1.0000 120 chr2L:171568-171688 1.0000 120 chrX:5664351-5664471 1.0000 120 chr3R:6664521-6664641 1.0000 120 chr3R:7103591-7103711 1.0000 120 chrX:4458044-4458164 1.0000 120 chr2L:5044902-5045022 1.0000 120 chr3R:5016471-5016591 1.0000 120 chr2L:22036989-22037109 1.0000 120 chrX:12947792-12947912 1.0000 120 chr2L:856158-856278 1.0000 120 chr2L:3121776-3121896 1.0000 120 chr3L:22847752-22847872 1.0000 120 chrX:13570394-13570514 1.0000 120 chr3R:11993409-11993529 1.0000 120 chr3R:10093575-10093695 1.0000 120 chr2R:14077581-14077701 1.0000 120 chr2L:1094785-1094905 1.0000 120 chr2R:6464949-6465069 1.0000 120 chrX:19608179-19608299 1.0000 120 chr2R:21193502-21193622 1.0000 120 chr2R:15515750-15515870 1.0000 120 chrX:768070-768190 1.0000 120 chr3L:19040458-19040578 1.0000 120 chr3L:8683911-8684031 1.0000 120 chrX:7995214-7995334 1.0000 120 chr2R:10212477-10212597 1.0000 120 chr3R:29891334-29891454 1.0000 120 chr2R:6607635-6607755 1.0000 120 chr2L:7628527-7628647 1.0000 120 chr2R:11633065-11633185 1.0000 120 chr3R:21825283-21825403 1.0000 120 chr3R:15983659-15983779 1.0000 120 chr3R:26908863-26908983 1.0000 120 chr3L:17539061-17539181 1.0000 120 chr3R:29831066-29831186 1.0000 120 chrX:12889212-12889332 1.0000 120 chr3L:14354677-14354797 1.0000 120 chr3R:20276154-20276274 1.0000 120 chr3R:23803798-23803918 1.0000 120 chr3L:18837948-18838068 1.0000 120 chrX:18238037-18238157 1.0000 120 chr2L:19285587-19285707 1.0000 120 chr2L:6818488-6818608 1.0000 120 chr3R:18243711-18243831 1.0000 120 chr3R:28587022-28587142 1.0000 120 chr3L:20792829-20792949 1.0000 120 chr3R:23445355-23445475 1.0000 120 chr3L:20494096-20494216 1.0000 120 chr2R:6573329-6573449 1.0000 120 chr3L:5807506-5807626 1.0000 120 chr3L:11528532-11528652 1.0000 120 chr3L:10680009-10680129 1.0000 120 chr3R:15670666-15670786 1.0000 120 chr2R:22200022-22200142 1.0000 120 chr3L:20954230-20954350 1.0000 120 chr3R:28556491-28556611 1.0000 120 chr3L:4025859-4025979 1.0000 120 chr3R:11312517-11312637 1.0000 120 chrX:15591772-15591892 1.0000 120 chr3L:15591281-15591401 1.0000 120 chr2R:22162343-22162463 1.0000 120 chr2L:8084522-8084642 1.0000 120 chr3R:15093061-15093181 1.0000 120 chr2R:6788316-6788436 1.0000 120 chr2R:14109805-14109925 1.0000 120 chr3L:1578454-1578574 1.0000 120 chr3R:13799712-13799832 1.0000 120 chr3L:8093759-8093879 1.0000 120 chr2R:22546677-22546797 1.0000 120 chr2L:2168365-2168485 1.0000 120 chr3R:23947143-23947263 1.0000 120 chr2L:11210440-11210560 1.0000 120 chr3L:20406409-20406529 1.0000 120 chr2R:10013365-10013485 1.0000 120 chr3R:10636184-10636304 1.0000 120 chrX:13626023-13626143 1.0000 120 chr3R:24293266-24293386 1.0000 120 chr3L:11085880-11086000 1.0000 120 chr2L:21037855-21037975 1.0000 120 chr3L:21961999-21962119 1.0000 120 chr2L:7339694-7339814 1.0000 120 chr2R:9309639-9309759 1.0000 120 chrX:10582191-10582311 1.0000 120 chr3R:24031626-24031746 1.0000 120 chr3L:19184217-19184337 1.0000 120 chr3L:6216126-6216246 1.0000 120 chr3L:2647825-2647945 1.0000 120 chr3L:8741316-8741436 1.0000 120 chr3L:12606438-12606558 1.0000 120 chr2L:9775343-9775463 1.0000 120 chr3L:1690851-1690971 1.0000 120 chr3L:18242259-18242379 1.0000 120 chr3R:15129021-15129141 1.0000 120 chr2R:6023200-6023320 1.0000 120 chr3L:8689826-8689946 1.0000 120 chr3L:17047909-17048029 1.0000 120 chr3L:7782414-7782534 1.0000 120 chr3L:3932884-3933004 1.0000 120 chr3R:21420005-21420125 1.0000 120 chr3L:3518943-3519063 1.0000 120 chr2L:6291748-6291868 1.0000 120 chr3R:10521285-10521405 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG6813/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG6813.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.303 C 0.204 G 0.202 T 0.292 Background letter frequencies (from file dataset with add-one prior applied): A 0.303 C 0.204 G 0.202 T 0.292 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF DTRTTTRC MEME-1 width = 8 sites = 146 llr = 1040 E-value = 2.3e-056 ******************************************************************************** -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3:5:::3: pos.-specific C 1::::::8 probability G 2:5:2:7: matrix T 3a:a8a:2 bits 2.3 2.1 1.8 * * * 1.6 * * * Relative 1.4 * * * * Entropy 1.2 ******* (10.3 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******* 0.0 -------- Multilevel ATGTTTGC consensus T A AT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:10521285-10521405 109 1.22e-05 GACAACTTCT GTGTTTGC TGTT chr3L:7782414-7782534 75 1.22e-05 CCGTGATATG GTGTTTGC TTGCCAGATA chr3L:5807506-5807626 7 1.22e-05 CGTCGA GTGTTTGC CGTGAGTCTT chr3R:29891334-29891454 41 1.22e-05 TGTAATTTCT GTGTTTGC CAAAGATACA chr3L:15548938-15549058 107 1.22e-05 AAGTGATCCG GTGTTTGC TTAGTt chr3L:17791602-17791722 27 1.22e-05 ATAACGATCG GTGTTTGC TTCTTTAGTT chr2L:2861594-2861714 10 1.22e-05 CAACATTAT GTGTTTGC ACTCTCGGTA chr2R:18675656-18675776 57 1.22e-05 GGTCCGGATT GTGTTTGC GCATAAATTG chr2L:19998295-19998415 11 1.22e-05 AATGAAGTGT GTGTTTGC TCAGTCGCCA chr3L:11788306-11788426 39 1.22e-05 TTGAACAAAG GTGTTTGC TTTTGGGATT chr2L:9775343-9775463 100 4.82e-05 GAATAGGAAA TTGTTTGC GGCAAATATA chr2L:7339694-7339814 89 4.82e-05 AGTCGTTGAT TTGTTTGC ACTGACCCGC chr2L:21037855-21037975 41 4.82e-05 TGTTTGGTTT ATGTTTGC CATGTAAACA chr3R:28587022-28587142 113 4.82e-05 TGGCTCATTA ATGTTTGC chr3R:20276154-20276274 35 4.82e-05 CACTTTCCTG TTGTTTGC TCAACACAAC chr3R:29831066-29831186 23 4.82e-05 GTAAACACTT TTGTTTGC CATCCGCGTC chr3R:15983659-15983779 46 4.82e-05 GCAAATACAA TTGTTTGC CCTGAAAAAT chrX:19608179-19608299 14 4.82e-05 GAGAGCCATT TTGTTTGC GCTTGTTCTG chr3R:10093575-10093695 26 4.82e-05 TAGATAGTTT TTGTTTGC GTCATGTGCA chrX:4458044-4458164 89 4.82e-05 TTTCATCtgt ttgtttgc gtgtctgttt chr3L:11107583-11107703 31 4.82e-05 GTTATTCATT TTGTTTGC TTGTCAGTCA chr3R:12657100-12657220 77 4.82e-05 TGTCAACTGG ATGTTTGC CCGTCATTCG chr2L:7828902-7829022 69 4.82e-05 AAGTGGGGTT ATGTTTGC GTCACCCAAA chr3L:8835028-8835148 77 4.82e-05 ATCTGTACAA ATGTTTGC CTTCGCCGGG chr2R:19414607-19414727 108 4.82e-05 AAACTAGTAA ATGTTTGC ATATA chrX:18580806-18580926 20 4.82e-05 ggctgtctgt ttgtttgc ttggtttcat chr3R:10169229-10169349 99 4.82e-05 TATATCGGTC ATGTTTGC GGACTTGGCC chr3R:27067512-27067632 6 4.82e-05 GAGTT TTGTTTGC AGTTCATCAA chr3L:16056368-16056488 36 4.82e-05 GTCAACATCA ATGTTTGC TTGATAAATA chr3R:30489917-30490037 92 4.82e-05 TCTGACATCT TTGTTTGC ACAGCGTTTA chr2R:13723369-13723489 37 4.82e-05 TTGATTCCCA TTGTTTGC ATTAGTGTTT chr2R:16820395-16820515 55 4.82e-05 AGACAAATAT TTGTTTGC TTTTTGTTGG chr2R:12458253-12458373 63 4.82e-05 GCCATCTGAA TTGTTTGC TTTGGGACTT chr3R:29548902-29549022 28 4.82e-05 TATTTATGAT TTGTTTGC TCATCGGCTG chr3R:22635132-22635252 111 4.82e-05 AAAAGAAACT TTGTTTGC TG chrX:6592201-6592321 52 6.66e-05 TTGTCTGTTT GTATTTGC TTTTCCGCTT chr3R:14472773-14472893 3 6.66e-05 TT GTATTTGC TTATCAGCGG chr3L:8689826-8689946 95 1.21e-04 CTGCTTCTAG TTATTTGC GACTGATTTA chr3L:2647825-2647945 63 1.21e-04 AATAAGAAAG ATATTTGC ACTCAGCGCA chr3L:8093759-8093879 58 1.21e-04 CACGTATTTA TTATTTGC CCGGCTTGAT chr2L:3121776-3121896 45 1.21e-04 CCCAAAACCA ATATTTGC ATTTCAGTGG chr3R:14300090-14300210 87 1.21e-04 CACTGGACTA ATATTTGC CTAAAGCCAG chr2L:16523224-16523344 96 1.21e-04 CAGTTGCTGC ATATTTGC CTTGCACTTT chr2L:6643575-6643695 80 1.21e-04 AACATTTGCG TTATTTGC GAAAAAGCTT chr3R:15677783-15677903 69 1.21e-04 AATAATATTT ATATTTGC TGCGAGCGCA chr3L:17656825-17656945 94 1.21e-04 TTATTAATTC TTATTTGC TGTCCTTGTT chr2L:8576581-8576701 84 1.21e-04 CACTGTTGAC TTATTTGC TTTGAGATAA chrX:3282115-3282235 36 1.21e-04 TTGTTGCTCA ATATTTGC ATATTTGTTT chr2L:7166014-7166134 74 1.21e-04 AAAAAGAAAA ATATTTGC TTGAAAATTG chr3L:14274837-14274957 14 1.21e-04 GCCAAACTAA ATATTTGC CGCCGGCAAA chr2L:10497554-10497674 101 1.21e-04 CTAGATAAAC ATATTTGC ATTACTTTGT chrX:1183316-1183436 84 1.21e-04 TCTAGACTGT TTATTTGC ACAGCGCCAA chr2L:5303741-5303861 86 1.21e-04 TTACACATAC ATATTTGC ATACTGATAA chr2R:18202726-18202846 55 1.21e-04 TTGTTTTCGT ATATTTGC GCTTGGGCTC chr3L:5785370-5785490 50 1.21e-04 ATTTATATCA ATATTTGC ACACAATTTG chr3R:23947143-23947263 52 1.51e-04 CGCACATCAT CTGTTTGC GTTGGTAAAT chr3R:23445355-23445475 25 1.51e-04 GTCCACGCGA CTGTTTGC CGTACGCATT chr3R:26908863-26908983 10 1.51e-04 TCTCCTCCT CTGTTTGC CCAACACTTT chr2L:1094785-1094905 90 1.51e-04 ACTGTTTGCA CTGTTTGC CCCCCCTCCT chr3R:9390356-9390476 77 1.51e-04 ATTTTGGTGA GTGTTTAC AAGACTCTTA chr3R:22756403-22756523 68 1.51e-04 AATTACAAAA CTGTTTGC ACCCAGATTC chr2L:2906262-2906382 25 1.51e-04 TTGTGGTTTC GTGTTTAC GTGTACTTAA chr3L:4272340-4272460 100 1.51e-04 CGGAATCGAG CTGTTTGC ATTCCTCATT chr3R:30062124-30062244 72 1.51e-04 ACTTTCCGTG CTGTTTGC CAAACTAATC chr3L:6216126-6216246 94 2.05e-04 TTTCAGAGAT TTGTTTAC TTTTCTGTGT chr3L:11085880-11086000 74 2.05e-04 GTTCTTCGCA TTGTTTAC TTAACCACAT chrX:13626023-13626143 14 2.05e-04 GAACCTGTTT TTGTTTAC TTGCAAAAAA chr2L:2168365-2168485 15 2.05e-04 GTATTATGAA ATGTTTAC GATTTGCTTG chr2R:8242615-8242735 51 2.05e-04 CAATATTCTC TTGTTTAC AATGCAAATA chrX:3967746-3967866 90 2.05e-04 TTGATTTGTT TTGTTTAC ATTCATACCA chr3L:14988406-14988526 38 2.05e-04 AGTGGGAGAG TTGTTTAC ATAGGTGTAA chr3L:1489645-1489765 97 2.05e-04 ACACCCCCTA ATGTTTAC ATACCCTGCA chr2L:8084522-8084642 1 2.14e-04 . GTGTGTGC GGCGGCAAGG chr3R:23803798-23803918 112 2.14e-04 GTGAGCGAGT GTGTGTGC C chrX:14840761-14840881 80 2.14e-04 TTATACATTC GTGTGTGC GCTCTTGTTT chr3R:23134840-23134960 65 2.14e-04 GCTAAATAAT GTGTGTGC CTTGTAAGTG chr3R:31603821-31603941 83 2.39e-04 CATCACCATA TTGTGTGC TAGTTTAGTA chr2L:3228818-3228938 79 2.39e-04 ATGCTGTAGG TTGTGTGC CATACAATTT chr3R:11993409-11993529 75 2.85e-04 atgtatgtgt gtatttac atatgtatAT chr2L:8165919-8166039 86 2.85e-04 ACGGCTTGGC CTATTTGC TTATCTTATT chr3R:17818927-17819047 57 2.85e-04 AAGACCATGA GTATTTAC TCATAGTTAC chr3R:15402788-15402908 53 2.85e-04 ATGCACATAA GTATTTAC AAAGTCGCTA chr2R:13532022-13532142 15 2.85e-04 GAGATTGCGG CTATTTGC GGAGAGGGCA chr3L:12606438-12606558 78 3.83e-04 ATTTATGAAT GTGTTTGT TCTTGCTGGT chr3R:24031626-24031746 78 3.83e-04 GATTGGGTTA TTATTTAC GATTGGAGCG chr3L:20406409-20406529 47 3.83e-04 tatttattta ttatttac ttaGCGCTTT chr3L:20494096-20494216 18 3.83e-04 TTATAAATAC ATATTTAC ATATGAAGCT chrX:18238037-18238157 73 3.83e-04 AGGTGTGACA ATATTTAC AATGTCTTGT chr2R:14077581-14077701 34 3.83e-04 GGGAAAATCA ATATTTAC ATAGACACAA chr2L:22036989-22037109 75 3.83e-04 CATCTGGCAA ATATTTAC ATAAGTCGGG chr3L:643180-643300 47 3.83e-04 CGTGATAAAC ATATTTAC CAATTGATTA chr2R:22205680-22205800 37 3.83e-04 TTATGGTTTC ATATTTAC ATGGTCTTTT chr3L:3134239-3134359 72 3.83e-04 GCTGTGAAGC TTATTTAC AAAAGAGTCA chrX:13645222-13645342 98 3.83e-04 TGTGCCAACA ATATTTAC CAAATCAACA chr3R:19000019-19000139 77 3.83e-04 GCAAAGGCAA ATATTTAC ACGAGTCCCT chr3L:13489340-13489460 22 3.83e-04 atttttctgt ttatTTAC CCATTGGCGA chr3L:14447075-14447195 95 3.83e-04 CTTCATGCAA ATATTTAC TCCAACAGTT chrX:6439625-6439745 102 3.83e-04 AGTTTATTAA ATATTTAC ATATAATCCC chr2R:14314471-14314591 51 3.83e-04 AACTCAACAA ATATTTAC GGACGCAGTC chr2L:5610208-5610328 16 3.83e-04 ATGCTGACGT ATATTTAC GTACGTTGAA chr2R:9269501-9269621 42 3.83e-04 CCGCCTGAAC ATATTTAC ACAATGAGCC chr2R:23740381-23740501 75 3.83e-04 TGAATATTTT GTGTTTGT ATTTGTCTGC chr2R:9309639-9309759 55 4.35e-04 CTCATTTGGT TTGTTTGT GGCTCTATTT chr2R:6573329-6573449 40 4.35e-04 GCAAACGAAA TTGTTTGT TTGACAAATA chr3L:14354677-14354797 12 4.35e-04 CACTCGTCGT TTGTTTGT TGAGAAAACA chr2R:15515750-15515870 35 4.35e-04 TGTCCATTGC ATGTTTGT ATATTTGTAT chr3R:5016471-5016591 89 4.35e-04 CTGCTTATTG ATGTTTGT CCAACTCGCA chr3L:614871-614991 52 4.35e-04 ATCTATTGGA TTGTTTGT CTGTCTGCCT chr3L:11253463-11253583 41 4.35e-04 CATTGCCTAG TTGTTTGT TTTTGGCTTC chr3R:31549290-31549410 63 4.47e-04 AACAGTTAAG GTATGTGC CAAATCAAAT chr2L:19937918-19938038 79 5.03e-04 CCCGGTAAAC ATATGTGC ACTGCACACA chr3R:14526803-14526923 10 5.30e-04 AAAACAGTT GTATTTGT GTTTCGGGCG chr2R:2262391-2262511 42 5.30e-04 GTAATGTACC GTATTTGT AATAACGACT chr3L:19184217-19184337 100 6.28e-04 TTTTGTCAAA ATATTTGT GTAAGAACTC chr2R:22162343-22162463 48 6.28e-04 ACACATCATA CTGTGTGC TGAGCGTGTT chr3L:20954230-20954350 95 6.28e-04 TTGATCCAGT ATATTTGT ACAGACCCGA chr3R:15670666-15670786 69 6.28e-04 CACAGATACT GTGTGTAC ACACATATAC chr2L:12465843-12465963 25 6.28e-04 TCATTTATAA ATATTTGT ATATTTGTGT chr3R:28552395-28552515 18 6.28e-04 GTGTGCGAGT GTGTGTAC ATTATGATCA chr3R:5320740-5320860 90 6.28e-04 AGACTTATAT TTATTTGT GTAATTATGA chr2L:425603-425723 70 6.28e-04 TAAGCGCCAA ATATTTGT TGATAAATGT chr2R:15465952-15466072 38 6.28e-04 AAAAACTTGT TTATTTGT CATACAATCG chr2R:10212477-10212597 57 6.65e-04 CATTTTTGCC TTGTGTAC TTTGACGGCG chrX:515829-515949 87 6.65e-04 TAAATTCGAT TTGTGTac aaagcaaaca chr3L:3518943-3519063 27 6.93e-04 TATCTGATTA CTATTTAC ATAACATTTT chr3R:29480097-29480217 27 6.93e-04 CATTTGGGTA CTATTTAC TTTTCCGTCG chr3L:4025859-4025979 51 8.14e-04 TATGCGCAGG TTGTTTAT CAGCGCAAAC chr3L:18833392-18833512 68 8.14e-04 TGTTGTTATT TTGTTTAT ACACATATTG chr2L:2864746-2864866 82 8.14e-04 CCAGAATTCA ATGTTTAT TTAAATGACA chr2L:22144249-22144369 86 8.46e-04 GTTTCTAGAT GTATGTAC GTAGTACATA chr3R:12369925-12370045 80 8.46e-04 atatatgtat gtatgtac atatgtacat chrX:6720106-6720226 67 8.46e-04 atgtatgtat gtatgtac aatgtacaca chrX:10582191-10582311 36 9.14e-04 caACACGGCC GTGTGTGT CTGTCTGTGT chr2L:11210440-11210560 22 9.14e-04 CAgtgtgtgt gtgtgtgt gtgtgtctgt chrX:13570394-13570514 35 9.14e-04 ACAAATGTAT ATATGTAC TATATCTGTA chr3L:18021011-18021131 74 9.14e-04 TTTTGAGAGT GTGTGTGT GAGCGACACA chr3R:21271372-21271492 23 9.14e-04 ACAAGAATAA ATATGTAC AAAAGTACGA chr3R:21825283-21825403 83 1.02e-03 TTGACAGTAT GTATTTAT ATTGGGACAA chrX:4691345-4691465 113 1.02e-03 TATGAACATT GTATTTAT chr2R:21082672-21082792 10 1.02e-03 TAGCGCCTG CTATTTGT CATCCATGGT chr3L:3932884-3933004 103 1.14e-03 GTTATTAAAA TTATTTAT AGCCGGTAGG chr3L:1690851-1690971 29 1.14e-03 AGCTGTTCAC ATATTTAT ATAGCTGGCT chr3R:24293266-24293386 108 1.14e-03 TTGATGATAA ATATTTAT GTTTG chr2L:7571925-7572045 64 1.14e-03 ACGTGTTTAA ATATTTAT GCCTTGACAA chr3L:22847752-22847872 53 1.24e-03 GAGTTGAAAT ATATGTGT ATAAACTAGC chr3R:11243209-11243329 50 1.24e-03 CTTTAGGAAA CTGTTTAT TTCAAGCAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:10521285-10521405 1.2e-05 108_[+1]_4 chr3L:7782414-7782534 1.2e-05 74_[+1]_38 chr3L:5807506-5807626 1.2e-05 6_[+1]_106 chr3R:29891334-29891454 1.2e-05 40_[+1]_72 chr3L:15548938-15549058 1.2e-05 106_[+1]_6 chr3L:17791602-17791722 1.2e-05 26_[+1]_86 chr2L:2861594-2861714 1.2e-05 9_[+1]_103 chr2R:18675656-18675776 1.2e-05 56_[+1]_56 chr2L:19998295-19998415 1.2e-05 10_[+1]_102 chr3L:11788306-11788426 1.2e-05 38_[+1]_74 chr2L:9775343-9775463 4.8e-05 99_[+1]_13 chr2L:7339694-7339814 4.8e-05 88_[+1]_24 chr2L:21037855-21037975 4.8e-05 40_[+1]_72 chr3R:28587022-28587142 4.8e-05 112_[+1] chr3R:20276154-20276274 4.8e-05 34_[+1]_78 chr3R:29831066-29831186 4.8e-05 22_[+1]_90 chr3R:15983659-15983779 4.8e-05 45_[+1]_67 chrX:19608179-19608299 4.8e-05 13_[+1]_99 chr3R:10093575-10093695 4.8e-05 25_[+1]_87 chrX:4458044-4458164 4.8e-05 88_[+1]_24 chr3L:11107583-11107703 4.8e-05 30_[+1]_82 chr3R:12657100-12657220 4.8e-05 76_[+1]_36 chr2L:7828902-7829022 4.8e-05 68_[+1]_44 chr3L:8835028-8835148 4.8e-05 76_[+1]_36 chr2R:19414607-19414727 4.8e-05 107_[+1]_5 chrX:18580806-18580926 4.8e-05 19_[+1]_93 chr3R:10169229-10169349 4.8e-05 98_[+1]_14 chr3R:27067512-27067632 4.8e-05 5_[+1]_107 chr3L:16056368-16056488 4.8e-05 35_[+1]_77 chr3R:30489917-30490037 4.8e-05 91_[+1]_21 chr2R:13723369-13723489 4.8e-05 36_[+1]_76 chr2R:16820395-16820515 4.8e-05 54_[+1]_58 chr2R:12458253-12458373 4.8e-05 62_[+1]_50 chr3R:29548902-29549022 4.8e-05 27_[+1]_85 chr3R:22635132-22635252 4.8e-05 110_[+1]_2 chrX:6592201-6592321 6.7e-05 51_[+1]_61 chr3R:14472773-14472893 6.7e-05 2_[+1]_110 chr3L:8689826-8689946 0.00012 94_[+1]_18 chr3L:2647825-2647945 0.00012 62_[+1]_50 chr3L:8093759-8093879 0.00012 57_[+1]_55 chr2L:3121776-3121896 0.00012 44_[+1]_68 chr3R:14300090-14300210 0.00012 86_[+1]_26 chr2L:16523224-16523344 0.00012 95_[+1]_17 chr2L:6643575-6643695 0.00012 79_[+1]_33 chr3R:15677783-15677903 0.00012 68_[+1]_44 chr3L:17656825-17656945 0.00012 93_[+1]_19 chr2L:8576581-8576701 0.00012 83_[+1]_29 chrX:3282115-3282235 0.00012 35_[+1]_77 chr2L:7166014-7166134 0.00012 73_[+1]_39 chr3L:14274837-14274957 0.00012 13_[+1]_99 chr2L:10497554-10497674 0.00012 100_[+1]_12 chrX:1183316-1183436 0.00012 83_[+1]_29 chr2L:5303741-5303861 0.00012 85_[+1]_27 chr2R:18202726-18202846 0.00012 54_[+1]_58 chr3L:5785370-5785490 0.00012 49_[+1]_63 chr3R:23947143-23947263 0.00015 51_[+1]_61 chr3R:23445355-23445475 0.00015 24_[+1]_88 chr3R:26908863-26908983 0.00015 9_[+1]_103 chr2L:1094785-1094905 0.00015 89_[+1]_23 chr3R:9390356-9390476 0.00015 76_[+1]_36 chr3R:22756403-22756523 0.00015 67_[+1]_45 chr2L:2906262-2906382 0.00015 24_[+1]_88 chr3L:4272340-4272460 0.00015 99_[+1]_13 chr3R:30062124-30062244 0.00015 71_[+1]_41 chr3L:6216126-6216246 0.00021 93_[+1]_19 chr3L:11085880-11086000 0.00021 73_[+1]_39 chrX:13626023-13626143 0.00021 13_[+1]_99 chr2L:2168365-2168485 0.00021 14_[+1]_98 chr2R:8242615-8242735 0.00021 50_[+1]_62 chrX:3967746-3967866 0.00021 89_[+1]_23 chr3L:14988406-14988526 0.00021 37_[+1]_75 chr3L:1489645-1489765 0.00021 96_[+1]_16 chr2L:8084522-8084642 0.00021 [+1]_112 chr3R:23803798-23803918 0.00021 111_[+1]_1 chrX:14840761-14840881 0.00021 79_[+1]_33 chr3R:23134840-23134960 0.00021 64_[+1]_48 chr3R:31603821-31603941 0.00024 82_[+1]_30 chr2L:3228818-3228938 0.00024 78_[+1]_34 chr3R:11993409-11993529 0.00028 74_[+1]_38 chr2L:8165919-8166039 0.00028 85_[+1]_27 chr3R:17818927-17819047 0.00028 56_[+1]_56 chr3R:15402788-15402908 0.00028 52_[+1]_60 chr2R:13532022-13532142 0.00028 14_[+1]_98 chr3L:12606438-12606558 0.00038 77_[+1]_35 chr3R:24031626-24031746 0.00038 77_[+1]_35 chr3L:20406409-20406529 0.00038 46_[+1]_66 chr3L:20494096-20494216 0.00038 17_[+1]_95 chrX:18238037-18238157 0.00038 72_[+1]_40 chr2R:14077581-14077701 0.00038 33_[+1]_79 chr2L:22036989-22037109 0.00038 74_[+1]_38 chr3L:643180-643300 0.00038 46_[+1]_66 chr2R:22205680-22205800 0.00038 36_[+1]_76 chr3L:3134239-3134359 0.00038 71_[+1]_41 chrX:13645222-13645342 0.00038 97_[+1]_15 chr3R:19000019-19000139 0.00038 76_[+1]_36 chr3L:13489340-13489460 0.00038 21_[+1]_91 chr3L:14447075-14447195 0.00038 94_[+1]_18 chrX:6439625-6439745 0.00038 101_[+1]_11 chr2R:14314471-14314591 0.00038 50_[+1]_62 chr2L:5610208-5610328 0.00038 15_[+1]_97 chr2R:9269501-9269621 0.00038 41_[+1]_71 chr2R:23740381-23740501 0.00038 74_[+1]_38 chr2R:9309639-9309759 0.00043 54_[+1]_58 chr2R:6573329-6573449 0.00043 39_[+1]_73 chr3L:14354677-14354797 0.00043 11_[+1]_101 chr2R:15515750-15515870 0.00043 34_[+1]_78 chr3R:5016471-5016591 0.00043 88_[+1]_24 chr3L:614871-614991 0.00043 51_[+1]_61 chr3L:11253463-11253583 0.00043 40_[+1]_72 chr3R:31549290-31549410 0.00045 62_[+1]_50 chr2L:19937918-19938038 0.0005 78_[+1]_34 chr3R:14526803-14526923 0.00053 9_[+1]_103 chr2R:2262391-2262511 0.00053 41_[+1]_71 chr3L:19184217-19184337 0.00063 99_[+1]_13 chr2R:22162343-22162463 0.00063 47_[+1]_65 chr3L:20954230-20954350 0.00063 94_[+1]_18 chr3R:15670666-15670786 0.00063 68_[+1]_44 chr2L:12465843-12465963 0.00063 24_[+1]_88 chr3R:28552395-28552515 0.00063 17_[+1]_95 chr3R:5320740-5320860 0.00063 89_[+1]_23 chr2L:425603-425723 0.00063 69_[+1]_43 chr2R:15465952-15466072 0.00063 37_[+1]_75 chr2R:10212477-10212597 0.00067 56_[+1]_56 chrX:515829-515949 0.00067 86_[+1]_26 chr3L:3518943-3519063 0.00069 26_[+1]_86 chr3R:29480097-29480217 0.00069 26_[+1]_86 chr3L:4025859-4025979 0.00081 50_[+1]_62 chr3L:18833392-18833512 0.00081 67_[+1]_45 chr2L:2864746-2864866 0.00081 81_[+1]_31 chr2L:22144249-22144369 0.00085 85_[+1]_27 chr3R:12369925-12370045 0.00085 79_[+1]_33 chrX:6720106-6720226 0.00085 66_[+1]_46 chrX:10582191-10582311 0.00091 35_[+1]_77 chr2L:11210440-11210560 0.00091 21_[+1]_91 chrX:13570394-13570514 0.00091 34_[+1]_78 chr3L:18021011-18021131 0.00091 73_[+1]_39 chr3R:21271372-21271492 0.00091 22_[+1]_90 chr3R:21825283-21825403 0.001 82_[+1]_30 chrX:4691345-4691465 0.001 112_[+1] chr2R:21082672-21082792 0.001 9_[+1]_103 chr3L:3932884-3933004 0.0011 102_[+1]_10 chr3L:1690851-1690971 0.0011 28_[+1]_84 chr3R:24293266-24293386 0.0011 107_[+1]_5 chr2L:7571925-7572045 0.0011 63_[+1]_49 chr3L:22847752-22847872 0.0012 52_[+1]_60 chr3R:11243209-11243329 0.0012 49_[+1]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DTRTTTRC width=8 seqs=146 chr3R:10521285-10521405 ( 109) GTGTTTGC 1 chr3L:7782414-7782534 ( 75) GTGTTTGC 1 chr3L:5807506-5807626 ( 7) GTGTTTGC 1 chr3R:29891334-29891454 ( 41) GTGTTTGC 1 chr3L:15548938-15549058 ( 107) GTGTTTGC 1 chr3L:17791602-17791722 ( 27) GTGTTTGC 1 chr2L:2861594-2861714 ( 10) GTGTTTGC 1 chr2R:18675656-18675776 ( 57) GTGTTTGC 1 chr2L:19998295-19998415 ( 11) GTGTTTGC 1 chr3L:11788306-11788426 ( 39) GTGTTTGC 1 chr2L:9775343-9775463 ( 100) TTGTTTGC 1 chr2L:7339694-7339814 ( 89) TTGTTTGC 1 chr2L:21037855-21037975 ( 41) ATGTTTGC 1 chr3R:28587022-28587142 ( 113) ATGTTTGC 1 chr3R:20276154-20276274 ( 35) TTGTTTGC 1 chr3R:29831066-29831186 ( 23) TTGTTTGC 1 chr3R:15983659-15983779 ( 46) TTGTTTGC 1 chrX:19608179-19608299 ( 14) TTGTTTGC 1 chr3R:10093575-10093695 ( 26) TTGTTTGC 1 chrX:4458044-4458164 ( 89) TTGTTTGC 1 chr3L:11107583-11107703 ( 31) TTGTTTGC 1 chr3R:12657100-12657220 ( 77) ATGTTTGC 1 chr2L:7828902-7829022 ( 69) ATGTTTGC 1 chr3L:8835028-8835148 ( 77) ATGTTTGC 1 chr2R:19414607-19414727 ( 108) ATGTTTGC 1 chrX:18580806-18580926 ( 20) TTGTTTGC 1 chr3R:10169229-10169349 ( 99) ATGTTTGC 1 chr3R:27067512-27067632 ( 6) TTGTTTGC 1 chr3L:16056368-16056488 ( 36) ATGTTTGC 1 chr3R:30489917-30490037 ( 92) TTGTTTGC 1 chr2R:13723369-13723489 ( 37) TTGTTTGC 1 chr2R:16820395-16820515 ( 55) TTGTTTGC 1 chr2R:12458253-12458373 ( 63) TTGTTTGC 1 chr3R:29548902-29549022 ( 28) TTGTTTGC 1 chr3R:22635132-22635252 ( 111) TTGTTTGC 1 chrX:6592201-6592321 ( 52) GTATTTGC 1 chr3R:14472773-14472893 ( 3) GTATTTGC 1 chr3L:8689826-8689946 ( 95) TTATTTGC 1 chr3L:2647825-2647945 ( 63) ATATTTGC 1 chr3L:8093759-8093879 ( 58) TTATTTGC 1 chr2L:3121776-3121896 ( 45) ATATTTGC 1 chr3R:14300090-14300210 ( 87) ATATTTGC 1 chr2L:16523224-16523344 ( 96) ATATTTGC 1 chr2L:6643575-6643695 ( 80) TTATTTGC 1 chr3R:15677783-15677903 ( 69) ATATTTGC 1 chr3L:17656825-17656945 ( 94) TTATTTGC 1 chr2L:8576581-8576701 ( 84) TTATTTGC 1 chrX:3282115-3282235 ( 36) ATATTTGC 1 chr2L:7166014-7166134 ( 74) ATATTTGC 1 chr3L:14274837-14274957 ( 14) ATATTTGC 1 chr2L:10497554-10497674 ( 101) ATATTTGC 1 chrX:1183316-1183436 ( 84) TTATTTGC 1 chr2L:5303741-5303861 ( 86) ATATTTGC 1 chr2R:18202726-18202846 ( 55) ATATTTGC 1 chr3L:5785370-5785490 ( 50) ATATTTGC 1 chr3R:23947143-23947263 ( 52) CTGTTTGC 1 chr3R:23445355-23445475 ( 25) CTGTTTGC 1 chr3R:26908863-26908983 ( 10) CTGTTTGC 1 chr2L:1094785-1094905 ( 90) CTGTTTGC 1 chr3R:9390356-9390476 ( 77) GTGTTTAC 1 chr3R:22756403-22756523 ( 68) CTGTTTGC 1 chr2L:2906262-2906382 ( 25) GTGTTTAC 1 chr3L:4272340-4272460 ( 100) CTGTTTGC 1 chr3R:30062124-30062244 ( 72) CTGTTTGC 1 chr3L:6216126-6216246 ( 94) TTGTTTAC 1 chr3L:11085880-11086000 ( 74) TTGTTTAC 1 chrX:13626023-13626143 ( 14) TTGTTTAC 1 chr2L:2168365-2168485 ( 15) ATGTTTAC 1 chr2R:8242615-8242735 ( 51) TTGTTTAC 1 chrX:3967746-3967866 ( 90) TTGTTTAC 1 chr3L:14988406-14988526 ( 38) TTGTTTAC 1 chr3L:1489645-1489765 ( 97) ATGTTTAC 1 chr2L:8084522-8084642 ( 1) GTGTGTGC 1 chr3R:23803798-23803918 ( 112) GTGTGTGC 1 chrX:14840761-14840881 ( 80) GTGTGTGC 1 chr3R:23134840-23134960 ( 65) GTGTGTGC 1 chr3R:31603821-31603941 ( 83) TTGTGTGC 1 chr2L:3228818-3228938 ( 79) TTGTGTGC 1 chr3R:11993409-11993529 ( 75) GTATTTAC 1 chr2L:8165919-8166039 ( 86) CTATTTGC 1 chr3R:17818927-17819047 ( 57) GTATTTAC 1 chr3R:15402788-15402908 ( 53) GTATTTAC 1 chr2R:13532022-13532142 ( 15) CTATTTGC 1 chr3L:12606438-12606558 ( 78) GTGTTTGT 1 chr3R:24031626-24031746 ( 78) TTATTTAC 1 chr3L:20406409-20406529 ( 47) TTATTTAC 1 chr3L:20494096-20494216 ( 18) ATATTTAC 1 chrX:18238037-18238157 ( 73) ATATTTAC 1 chr2R:14077581-14077701 ( 34) ATATTTAC 1 chr2L:22036989-22037109 ( 75) ATATTTAC 1 chr3L:643180-643300 ( 47) ATATTTAC 1 chr2R:22205680-22205800 ( 37) ATATTTAC 1 chr3L:3134239-3134359 ( 72) TTATTTAC 1 chrX:13645222-13645342 ( 98) ATATTTAC 1 chr3R:19000019-19000139 ( 77) ATATTTAC 1 chr3L:13489340-13489460 ( 22) TTATTTAC 1 chr3L:14447075-14447195 ( 95) ATATTTAC 1 chrX:6439625-6439745 ( 102) ATATTTAC 1 chr2R:14314471-14314591 ( 51) ATATTTAC 1 chr2L:5610208-5610328 ( 16) ATATTTAC 1 chr2R:9269501-9269621 ( 42) ATATTTAC 1 chr2R:23740381-23740501 ( 75) GTGTTTGT 1 chr2R:9309639-9309759 ( 55) TTGTTTGT 1 chr2R:6573329-6573449 ( 40) TTGTTTGT 1 chr3L:14354677-14354797 ( 12) TTGTTTGT 1 chr2R:15515750-15515870 ( 35) ATGTTTGT 1 chr3R:5016471-5016591 ( 89) ATGTTTGT 1 chr3L:614871-614991 ( 52) TTGTTTGT 1 chr3L:11253463-11253583 ( 41) TTGTTTGT 1 chr3R:31549290-31549410 ( 63) GTATGTGC 1 chr2L:19937918-19938038 ( 79) ATATGTGC 1 chr3R:14526803-14526923 ( 10) GTATTTGT 1 chr2R:2262391-2262511 ( 42) GTATTTGT 1 chr3L:19184217-19184337 ( 100) ATATTTGT 1 chr2R:22162343-22162463 ( 48) CTGTGTGC 1 chr3L:20954230-20954350 ( 95) ATATTTGT 1 chr3R:15670666-15670786 ( 69) GTGTGTAC 1 chr2L:12465843-12465963 ( 25) ATATTTGT 1 chr3R:28552395-28552515 ( 18) GTGTGTAC 1 chr3R:5320740-5320860 ( 90) TTATTTGT 1 chr2L:425603-425723 ( 70) ATATTTGT 1 chr2R:15465952-15466072 ( 38) TTATTTGT 1 chr2R:10212477-10212597 ( 57) TTGTGTAC 1 chrX:515829-515949 ( 87) TTGTGTAC 1 chr3L:3518943-3519063 ( 27) CTATTTAC 1 chr3R:29480097-29480217 ( 27) CTATTTAC 1 chr3L:4025859-4025979 ( 51) TTGTTTAT 1 chr3L:18833392-18833512 ( 68) TTGTTTAT 1 chr2L:2864746-2864866 ( 82) ATGTTTAT 1 chr2L:22144249-22144369 ( 86) GTATGTAC 1 chr3R:12369925-12370045 ( 80) GTATGTAC 1 chrX:6720106-6720226 ( 67) GTATGTAC 1 chrX:10582191-10582311 ( 36) GTGTGTGT 1 chr2L:11210440-11210560 ( 22) GTGTGTGT 1 chrX:13570394-13570514 ( 35) ATATGTAC 1 chr3L:18021011-18021131 ( 74) GTGTGTGT 1 chr3R:21271372-21271492 ( 23) ATATGTAC 1 chr3R:21825283-21825403 ( 83) GTATTTAT 1 chrX:4691345-4691465 ( 113) GTATTTAT 1 chr2R:21082672-21082792 ( 10) CTATTTGT 1 chr3L:3932884-3933004 ( 103) TTATTTAT 1 chr3L:1690851-1690971 ( 29) ATATTTAT 1 chr3R:24293266-24293386 ( 108) ATATTTAT 1 chr2L:7571925-7572045 ( 64) ATATTTAT 1 chr3L:22847752-22847872 ( 53) ATATGTGT 1 chr3R:11243209-11243329 ( 50) CTGTTTAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.3915 E= 2.3e-056 15 -109 29 14 -1383 -1383 -1383 178 60 -1383 142 -1383 -1383 -1383 -1383 178 -1383 -1383 -42 154 -1383 -1383 -1383 178 21 -1383 169 -1383 -1383 194 -1383 -41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 146 E= 2.3e-056 0.335616 0.095890 0.246575 0.321918 0.000000 0.000000 0.000000 1.000000 0.458904 0.000000 0.541096 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.150685 0.849315 0.000000 0.000000 0.000000 1.000000 0.349315 0.000000 0.650685 0.000000 0.000000 0.780822 0.000000 0.219178 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTRTTTRC MEME-1 regular expression -------------------------------------------------------------------------------- [ATG]T[GA]TTT[GA][CT] -------------------------------------------------------------------------------- Time 7.40 secs. ******************************************************************************** ******************************************************************************** MOTIF DGYAAAYA MEME-2 width = 8 sites = 142 llr = 983 E-value = 2.3e-038 ******************************************************************************** -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 43:a9a:a pos.-specific C 1:6:1:5: probability G 37:::::: matrix T 3:4:::5: bits 2.3 2.1 1.8 1.6 * * * Relative 1.4 * * * Entropy 1.2 ******* (10.0 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******* 0.0 -------- Multilevel AGCAAACA consensus GAT T sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:1690851-1690971 59 1.43e-05 ACCATATATG GGCAAACA TTTAGACAAA chr3L:8093759-8093879 23 1.43e-05 CTGGCTGCTG GGCAAACA AAATCGTTTT chr3R:23445355-23445475 70 1.43e-05 aaagacaaac ggcaaaca gcgaacaaca chr3R:29831066-29831186 90 1.43e-05 GTTAGAAAGC GGCAAACA TGCAAAATTT chrX:768070-768190 79 1.43e-05 CAAAAGCAAA GGCAAACA GTATGGGAGA chr3R:6664521-6664641 20 1.43e-05 CCCGCTCGCG GGCAAACA AACTAAGCAA chr2L:171568-171688 59 1.43e-05 AAAAGACCAA GGCAAACA CAGGCGGAAA chr3L:8835028-8835148 93 1.43e-05 GCCTTCGCCG GGCAAACA CTTATGTAGc chr3R:12369925-12370045 63 1.43e-05 ATTGATATCA GGCAAACa tatatgtatg chr3L:7859825-7859945 27 1.43e-05 TAACTCCGGG GGCAAACA ACTAGGGCAA chr3L:3755785-3755905 58 1.43e-05 AAACCAACTG GGCAAACA AGTTGGAGAA chr2R:11403180-11403300 78 1.43e-05 AAAAGTAGAA GGCAAACA AACTGGATGT chr3R:22635132-22635252 93 1.43e-05 TTTATGGAAC GGCAAACA AAAAGAAACT chr3L:8689826-8689946 64 3.58e-05 caaacaaata agcaaaca aacaaacaaG chr2R:14077581-14077701 98 3.58e-05 CAACTCGTAC AGcaaaca aacaaacaaa chr3R:31549290-31549410 49 3.58e-05 AAGACACGAG AGCAAACA GTTAAGGTAT chr2R:24746023-24746143 106 3.58e-05 TAAacaaaca agcaaaca cacacac chrX:18580806-18580926 86 3.58e-05 CTGCCCTGCC AGCAAACA GAACTTCTTG chr3L:14988406-14988526 69 3.58e-05 AAGCACCTGT AGCAAACA CAGCACAAAT chr3R:31603821-31603941 67 3.58e-05 TGAACACTTG AGCAAACA TCACCATATT chr3L:14447075-14447195 71 3.58e-05 TCAAGTGACG AGCAAACA ACTCAACTTC chr3L:15689699-15689819 56 3.58e-05 GGACACGCAA AGCAAACA AAGTCCAAGT chr2L:5303741-5303861 44 3.58e-05 AGCACACCAC AGCAAACA GAGTGGAGTG chrX:515829-515949 97 3.58e-05 TTGTGTacaa agcaaaca aagaaatcaa chr3L:18242259-18242379 45 7.70e-05 TTTGGTTCTG GGCAAATA GAAAGGCACT chr2L:9775343-9775463 108 7.70e-05 AATTGTTTGC GGCAAATA TATTA chr3L:19184217-19184337 54 7.70e-05 GTGCATTCGG GGCAAATA TAAATATTTA chr3R:15983659-15983779 35 7.70e-05 TATCAGCAAT GGCAAATA CAATTGTTTG chr2R:10212477-10212597 113 7.70e-05 TCGAAAGGAA GGCAAATA chr3L:15548938-15549058 48 7.70e-05 GAATATGAAA TGCAAACA CAAGTGCAAC chr2L:6643575-6643695 66 7.70e-05 TTTGGCTAAA TGCAAACA TTTGCGTTAT chr2L:2864746-2864866 22 7.70e-05 GCGTCGGCTG TGCAAACA TTTGCATTTG chr3L:14274837-14274957 26 7.70e-05 ATTTGCCGCC GGCAAATA TTTAAAAGGT chr3L:3390608-3390728 74 7.70e-05 TAACAATTTG TGCAAACA TCGGGGAACa chr3L:18846311-18846431 82 7.70e-05 TGTCTCTGTG GGCAAATA CAAATACTTT chr3L:1742819-1742939 6 7.70e-05 CGAAA GGCAAATA TATTCTTCCC chr2R:15249402-15249522 113 7.70e-05 TGTAGATCGC GGCAAATA chr3L:5785370-5785490 29 7.70e-05 ATAAACAAAG TGCAAACA TGGATTTATA chr2R:22162343-22162463 18 1.08e-04 ACAGCAGCAG AGCAAATA TTATATAAGC chr2R:22200022-22200142 58 1.08e-04 GACTGGGAAA AGCAAATA GGCCATGTTT chrX:12947792-12947912 26 1.08e-04 ACGCGAAATC AGCAAATA GACCGGAAGT chr3R:6401064-6401184 98 1.08e-04 gaacaaataa agcaaata aataaatgct chr2L:12509587-12509707 87 1.08e-04 AACAAATAAT AGCAAATA TTGAACCATT chrX:3967746-3967866 29 1.08e-04 ATAAATAGCA AGCAAATA GTCAATATTT chr3L:17656825-17656945 9 1.08e-04 ATTCGAAG AGCAAATA ATATTGTTTA chrX:6720106-6720226 20 1.08e-04 AGTTTAGTTA AGCAAata tatgtacata chr3R:8318002-8318122 52 1.08e-04 ATTCGCTCTC AGCAAATA CAAATAATAC chrX:15497873-15497993 17 1.08e-04 GAGCAAAATA AGCAAATA AAGCCGTCTC chr2L:7628527-7628647 89 1.58e-04 GTATAAAGTC TGCAAATA TAAATAAGTA chr3R:11993409-11993529 92 1.58e-04 catatgtatA TGCAAATA GTGCGGGTGG chr2R:8242615-8242735 61 1.58e-04 TTGTTTACAA TGCAAATA AATTGAGATC chr3L:17419501-17419621 74 1.58e-04 CACGCAAACA GGTAAACA CTCTATTTAG chr3R:23134840-23134960 11 1.58e-04 GGGTGCGTAA GGTAAACA TTTACGTATA chr3R:29548902-29549022 80 1.58e-04 ACATTTGCCA TGCAAATA AGCCCGGCTT chr3R:24293266-24293386 80 1.89e-04 ATATTTTTTC AGTAAACA CAATTGATTG chr2R:6464949-6465069 71 1.89e-04 acagcataaa agtaaaca acagcataac chr2L:16523224-16523344 47 1.89e-04 GCAATGAATG AGTAAACA AAAACAAACG chr2R:23615226-23615346 48 1.89e-04 CGCAGTCCCG AGTAAACA ATTAAAAACC chr3L:15814144-15814264 100 1.89e-04 ATAAACAAAG AGTAAACA GCACATACGA chr3R:29480097-29480217 53 1.89e-04 CGACAGCCAA AGTAAACA AAGCCGCATC chr2L:21037855-21037975 51 2.69e-04 ATGTTTGCCA TGTAAACA AATAAACAAA chr3R:23947143-23947263 63 2.69e-04 TGTTTGCGTT GGTAAATA GTGACAAGTT chr3L:1578454-1578574 47 2.69e-04 TAGGTAAATA GGTAAATA GAAGTAAATT chr3L:5807506-5807626 106 2.69e-04 CAATAGCTGT TGTAAACA CTTCTGG chr2R:9266577-9266697 37 2.69e-04 CATTCGGAAA TGTAAACA AACCAAACGT chr2L:7571925-7572045 86 2.69e-04 TGACAAATTC TGTAAACA AATTTGTCTT chr3R:24544469-24544589 50 2.69e-04 TCTCAATTTG TGTAAACA CGCACCGCAA chr2R:13532022-13532142 43 2.69e-04 CATAAAGTAA GGTAAATA CTATTTACAT chr2L:19998295-19998415 75 2.69e-04 GGGAGAGTAA GGTAAATA TTTGCCACAA chr2L:18717527-18717647 31 2.69e-04 CAGACGGGCA GACAAACA TCTAAGCACA chr2R:2262391-2262511 9 2.69e-04 TTTTTATG TGTAAACA CATACGTACA chr2L:3549017-3549137 58 2.69e-04 TCGCACAATT GGTAAATA CCGTGGGTGA chr2L:11961007-11961127 52 2.69e-04 GCTAAGCCAA TGTAAACA TGTGTAGATT chr2R:22546677-22546797 108 2.83e-04 ctaaaacaaa cgcaaaCA AACAA chr3L:4025859-4025979 62 2.83e-04 TGTTTATCAG CGCAAACA AAAGCCGTCG chr2L:2906262-2906382 45 2.83e-04 GTACTTAAAC CGCAAACA TGACAAACTG chrX:3282115-3282235 60 2.83e-04 GTTTTTGAAA CGCAAACA AATGTCAAGC chr3L:17047909-17048029 80 3.69e-04 ATGACTGGCG AGTAAATA AACGCAATGC chr3L:12606438-12606558 49 3.69e-04 TTGAGAAGTG AGTAAATA AGTATGTTTC chr2R:14109805-14109925 55 3.69e-04 TATCAATAAA AGTAAATA CGAGAAATGA chr3R:15093061-15093181 67 3.69e-04 AATATGTAAT AACAAACA AACGGCGAGT chrX:15591772-15591892 22 3.69e-04 TAATAAAATA AACAAACA GCTTGGAAAA chrX:768871-768991 91 3.69e-04 CACAAAAACA AACAAACA AAGCGACCTG chr3R:21271372-21271492 98 3.69e-04 ATACAGAAGA AACAAACA AAAGACAAGC chr2R:21082672-21082792 96 3.69e-04 GGAACAAGAA AGTAAATA TCTACAAAAA chr2R:15465952-15466072 99 3.69e-04 AACATGGTGA AACAAACA GTGAATAAGA chr2R:6573329-6573449 50 4.88e-04 TTGTTTGTTT GACAAATA GAATTTCCAC chr3L:18837948-18838068 99 4.88e-04 AGCTGTCAAA TGTAAATA ACCAAAAGAA chr3R:21825283-21825403 39 4.88e-04 TTATTTGACT TGTAAATA AATAAACAAG chr3L:17791602-17791722 108 4.88e-04 TACACATTAA GACAAATA TGTAC chr2L:19937918-19938038 52 4.88e-04 GTAAATGTCA TGTAAATA TTTGATCAGC chr3L:16488603-16488723 64 4.88e-04 aaagaaccaa gacaaata acaaataatc chr2L:2861594-2861714 30 4.88e-04 TCTCGGTACG TGTAAATA AAACACGACA chr3R:14526803-14526923 59 4.88e-04 ATAAAATGCA GACAAATA AAGGGAAATG chr2R:16820395-16820515 46 4.88e-04 TAGACGGCCA GACAAATA TTTGTTTGCT chr2L:7166014-7166134 94 4.88e-04 GAAAATTGCC TGTAAATA TTTGAGTCAG chr2L:10497554-10497674 20 4.88e-04 CATCAACCTA TGTAAATA TGTGGCCAAA chr2R:6503149-6503269 60 4.88e-04 ATAGCGTCAA TACAAACA GTTTGACAAT chr3L:3932884-3933004 26 5.82e-04 TTTGACAACT AACAAATA CGATCTGCCA chr3L:21961999-21962119 45 5.82e-04 CATGTCGGAC AACAAATA AACAACCCAA chr2L:2168365-2168485 50 5.82e-04 GTAAGTTCAT AACAAATA TGCCCCCTCC chr3L:11528532-11528652 86 5.82e-04 TAGGCATTTA AACAAATA AACTTAGTTC chr3L:8347490-8347610 72 5.82e-04 ACGCCAGCTG TGCACACA ACGTCGCGGT chr2L:1448305-1448425 46 5.82e-04 CATAATTTAT GGCACATA AGACCAAACA chr3R:5746753-5746873 82 5.82e-04 ACTACTATTA AACAAATA AAGATGGCAA chr3R:28587022-28587142 3 6.78e-04 TG AGCACATA TGTACTCAAA chr2L:6818488-6818608 59 6.78e-04 TTGTAAATTA TACAAATA ACGATCAACA chrX:13645222-13645342 51 6.78e-04 AATCCAAAAT TACAAATA TTAATTTAAA chr2L:892639-892759 76 6.99e-04 AATCGTGATG CGTAAACA AACCTGGCAA chr3R:22756403-22756523 44 6.99e-04 GGCCATATAA CGTAAACA GTTTTAAATT chr2R:6607635-6607755 64 7.79e-04 TGTGAGTGAA GGTACACA CAACTAAGTA chr2L:856158-856278 40 7.79e-04 TGCCAAGCTG AATAAACA AGCCGCAAGT chr3R:15402788-15402908 44 7.79e-04 ATTTTTATAA TGCACATA AGTATTTACA chr2L:5113568-5113688 31 7.79e-04 GACAAACGTA AATAAACA TTTAGTTAAA chrX:1183316-1183436 41 7.79e-04 acgaaaccca aataaaca caaatgaaat chr3R:5016471-5016591 36 8.88e-04 ATATTTTCCA TATAAACA CTCGGCTGCT chr3R:11869391-11869511 56 8.88e-04 GCACAAAGTT TATAAACA AACTGAAAAC chr3L:16056368-16056488 46 8.88e-04 ATGTTTGCTT GATAAATA AGTGGAGGGA chr3L:643180-643300 73 9.39e-04 TATTTTCCAG CACAAACA CGCGTTGGCT chr3R:21420005-21420125 113 1.06e-03 TGaataaaaa aataaata chr3L:7782414-7782534 56 1.06e-03 GAATTCCAAA AATAAATA CCCGTGATAT chr3L:6216126-6216246 61 1.06e-03 TTAATATCTT TGTACACA GGCGCACATG chr2L:17448602-17448722 92 1.06e-03 TGCGCTGCCA TGTACACA GGTGTTTCGG chr3L:18021011-18021131 86 1.06e-03 GTGTGTGAGC GACACACA AATTGAGTGC chr2L:3228818-3228938 49 1.06e-03 TGCTATTGAC AATAAATA ATTAGTAACG chrX:12889212-12889332 8 1.07e-03 acacaca cgcacaca cagacacaca chr3R:13799712-13799832 103 1.18e-03 taaaatcaaa tataaata attaaaaaaa chr3R:15670666-15670786 53 1.18e-03 ATTGCAAGAC AACACACA CAGATACTGT chr3L:20494096-20494216 9 1.18e-03 ATAAATAT TATAAATA CATATTTACA chrX:7995214-7995334 34 1.18e-03 CCTTGTAAAA TATAAATA TAAAAATATA chr2R:15515750-15515870 64 1.18e-03 TATAGATATA AGTACATA TTTCATATTC chr3L:22847752-22847872 95 1.18e-03 TCAGCCGTGC TATAAATA GAAATTCAAC chr2L:5044902-5045022 12 1.18e-03 ACAGTGGCTG TATAAATA TTATATACAT chr3R:7103591-7103711 75 1.18e-03 GGTGCAACAT Aacacaca cacacacaca chr2L:22144249-22144369 96 1.18e-03 GTATGTACGT AGTACATA CTCGAATGTA chr3R:5320740-5320860 63 1.18e-03 TGTACATACC TATAAATA CATATCTAGA chr3R:28552395-28552515 57 1.21e-03 AACATAACTG CACAAATA TGTACATAGC chr2L:10505034-10505154 58 1.21e-03 GTGCCGGCCA CACAAATA TTGACACGCG chr3L:11085880-11086000 14 1.28e-03 CATACATGTA TGTACATA CATAGATAGT chrX:13626023-13626143 68 1.28e-03 TACACATGTA TGTACATA TGTACATTTG chr2R:10013365-10013485 30 1.28e-03 GTTTCACAAT TACACACA AATCAAAACT chr3R:29891334-29891454 53 1.41e-03 GTTTGCCAAA GATACACA AGTCTGGTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:1690851-1690971 1.4e-05 58_[+2]_54 chr3L:8093759-8093879 1.4e-05 22_[+2]_90 chr3R:23445355-23445475 1.4e-05 69_[+2]_43 chr3R:29831066-29831186 1.4e-05 89_[+2]_23 chrX:768070-768190 1.4e-05 78_[+2]_34 chr3R:6664521-6664641 1.4e-05 19_[+2]_93 chr2L:171568-171688 1.4e-05 58_[+2]_54 chr3L:8835028-8835148 1.4e-05 92_[+2]_20 chr3R:12369925-12370045 1.4e-05 62_[+2]_50 chr3L:7859825-7859945 1.4e-05 26_[+2]_86 chr3L:3755785-3755905 1.4e-05 57_[+2]_55 chr2R:11403180-11403300 1.4e-05 77_[+2]_35 chr3R:22635132-22635252 1.4e-05 92_[+2]_20 chr3L:8689826-8689946 3.6e-05 63_[+2]_49 chr2R:14077581-14077701 3.6e-05 97_[+2]_15 chr3R:31549290-31549410 3.6e-05 48_[+2]_64 chr2R:24746023-24746143 3.6e-05 105_[+2]_7 chrX:18580806-18580926 3.6e-05 85_[+2]_27 chr3L:14988406-14988526 3.6e-05 68_[+2]_44 chr3R:31603821-31603941 3.6e-05 66_[+2]_46 chr3L:14447075-14447195 3.6e-05 70_[+2]_42 chr3L:15689699-15689819 3.6e-05 55_[+2]_57 chr2L:5303741-5303861 3.6e-05 43_[+2]_69 chrX:515829-515949 3.6e-05 96_[+2]_16 chr3L:18242259-18242379 7.7e-05 44_[+2]_68 chr2L:9775343-9775463 7.7e-05 107_[+2]_5 chr3L:19184217-19184337 7.7e-05 53_[+2]_59 chr3R:15983659-15983779 7.7e-05 34_[+2]_78 chr2R:10212477-10212597 7.7e-05 112_[+2] chr3L:15548938-15549058 7.7e-05 47_[+2]_65 chr2L:6643575-6643695 7.7e-05 65_[+2]_47 chr2L:2864746-2864866 7.7e-05 21_[+2]_91 chr3L:14274837-14274957 7.7e-05 25_[+2]_87 chr3L:3390608-3390728 7.7e-05 73_[+2]_39 chr3L:18846311-18846431 7.7e-05 81_[+2]_31 chr3L:1742819-1742939 7.7e-05 5_[+2]_107 chr2R:15249402-15249522 7.7e-05 112_[+2] chr3L:5785370-5785490 7.7e-05 28_[+2]_84 chr2R:22162343-22162463 0.00011 17_[+2]_95 chr2R:22200022-22200142 0.00011 57_[+2]_55 chrX:12947792-12947912 0.00011 25_[+2]_87 chr3R:6401064-6401184 0.00011 97_[+2]_15 chr2L:12509587-12509707 0.00011 86_[+2]_26 chrX:3967746-3967866 0.00011 28_[+2]_84 chr3L:17656825-17656945 0.00011 8_[+2]_104 chrX:6720106-6720226 0.00011 19_[+2]_93 chr3R:8318002-8318122 0.00011 51_[+2]_61 chrX:15497873-15497993 0.00011 16_[+2]_96 chr2L:7628527-7628647 0.00016 88_[+2]_24 chr3R:11993409-11993529 0.00016 91_[+2]_21 chr2R:8242615-8242735 0.00016 60_[+2]_52 chr3L:17419501-17419621 0.00016 73_[+2]_39 chr3R:23134840-23134960 0.00016 10_[+2]_102 chr3R:29548902-29549022 0.00016 79_[+2]_33 chr3R:24293266-24293386 0.00019 79_[+2]_33 chr2R:6464949-6465069 0.00019 70_[+2]_42 chr2L:16523224-16523344 0.00019 46_[+2]_66 chr2R:23615226-23615346 0.00019 47_[+2]_65 chr3L:15814144-15814264 0.00019 99_[+2]_13 chr3R:29480097-29480217 0.00019 52_[+2]_60 chr2L:21037855-21037975 0.00027 50_[+2]_62 chr3R:23947143-23947263 0.00027 62_[+2]_50 chr3L:1578454-1578574 0.00027 46_[+2]_66 chr3L:5807506-5807626 0.00027 105_[+2]_7 chr2R:9266577-9266697 0.00027 36_[+2]_76 chr2L:7571925-7572045 0.00027 85_[+2]_27 chr3R:24544469-24544589 0.00027 49_[+2]_63 chr2R:13532022-13532142 0.00027 42_[+2]_70 chr2L:19998295-19998415 0.00027 74_[+2]_38 chr2L:18717527-18717647 0.00027 30_[+2]_82 chr2R:2262391-2262511 0.00027 8_[+2]_104 chr2L:3549017-3549137 0.00027 57_[+2]_55 chr2L:11961007-11961127 0.00027 51_[+2]_61 chr2R:22546677-22546797 0.00028 107_[+2]_5 chr3L:4025859-4025979 0.00028 61_[+2]_51 chr2L:2906262-2906382 0.00028 44_[+2]_68 chrX:3282115-3282235 0.00028 59_[+2]_53 chr3L:17047909-17048029 0.00037 79_[+2]_33 chr3L:12606438-12606558 0.00037 48_[+2]_64 chr2R:14109805-14109925 0.00037 54_[+2]_58 chr3R:15093061-15093181 0.00037 66_[+2]_46 chrX:15591772-15591892 0.00037 21_[+2]_91 chrX:768871-768991 0.00037 90_[+2]_22 chr3R:21271372-21271492 0.00037 97_[+2]_15 chr2R:21082672-21082792 0.00037 95_[+2]_17 chr2R:15465952-15466072 0.00037 98_[+2]_14 chr2R:6573329-6573449 0.00049 49_[+2]_63 chr3L:18837948-18838068 0.00049 98_[+2]_14 chr3R:21825283-21825403 0.00049 38_[+2]_74 chr3L:17791602-17791722 0.00049 107_[+2]_5 chr2L:19937918-19938038 0.00049 51_[+2]_61 chr3L:16488603-16488723 0.00049 63_[+2]_49 chr2L:2861594-2861714 0.00049 29_[+2]_83 chr3R:14526803-14526923 0.00049 58_[+2]_54 chr2R:16820395-16820515 0.00049 45_[+2]_67 chr2L:7166014-7166134 0.00049 93_[+2]_19 chr2L:10497554-10497674 0.00049 19_[+2]_93 chr2R:6503149-6503269 0.00049 59_[+2]_53 chr3L:3932884-3933004 0.00058 25_[+2]_87 chr3L:21961999-21962119 0.00058 44_[+2]_68 chr2L:2168365-2168485 0.00058 49_[+2]_63 chr3L:11528532-11528652 0.00058 85_[+2]_27 chr3L:8347490-8347610 0.00058 71_[+2]_41 chr2L:1448305-1448425 0.00058 45_[+2]_67 chr3R:5746753-5746873 0.00058 81_[+2]_31 chr3R:28587022-28587142 0.00068 2_[+2]_110 chr2L:6818488-6818608 0.00068 58_[+2]_54 chrX:13645222-13645342 0.00068 50_[+2]_62 chr2L:892639-892759 0.0007 75_[+2]_37 chr3R:22756403-22756523 0.0007 43_[+2]_69 chr2R:6607635-6607755 0.00078 63_[+2]_49 chr2L:856158-856278 0.00078 39_[+2]_73 chr3R:15402788-15402908 0.00078 43_[+2]_69 chr2L:5113568-5113688 0.00078 30_[+2]_82 chrX:1183316-1183436 0.00078 40_[+2]_72 chr3R:5016471-5016591 0.00089 35_[+2]_77 chr3R:11869391-11869511 0.00089 55_[+2]_57 chr3L:16056368-16056488 0.00089 45_[+2]_67 chr3L:643180-643300 0.00094 72_[+2]_40 chr3R:21420005-21420125 0.0011 112_[+2] chr3L:7782414-7782534 0.0011 55_[+2]_57 chr3L:6216126-6216246 0.0011 60_[+2]_52 chr2L:17448602-17448722 0.0011 91_[+2]_21 chr3L:18021011-18021131 0.0011 85_[+2]_27 chr2L:3228818-3228938 0.0011 48_[+2]_64 chrX:12889212-12889332 0.0011 7_[+2]_105 chr3R:13799712-13799832 0.0012 102_[+2]_10 chr3R:15670666-15670786 0.0012 52_[+2]_60 chr3L:20494096-20494216 0.0012 8_[+2]_104 chrX:7995214-7995334 0.0012 33_[+2]_79 chr2R:15515750-15515870 0.0012 63_[+2]_49 chr3L:22847752-22847872 0.0012 94_[+2]_18 chr2L:5044902-5045022 0.0012 11_[+2]_101 chr3R:7103591-7103711 0.0012 74_[+2]_38 chr2L:22144249-22144369 0.0012 95_[+2]_17 chr3R:5320740-5320860 0.0012 62_[+2]_50 chr3R:28552395-28552515 0.0012 56_[+2]_56 chr2L:10505034-10505154 0.0012 57_[+2]_55 chr3L:11085880-11086000 0.0013 13_[+2]_99 chrX:13626023-13626143 0.0013 67_[+2]_45 chr2R:10013365-10013485 0.0013 29_[+2]_83 chr3R:29891334-29891454 0.0014 52_[+2]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DGYAAAYA width=8 seqs=142 chr3L:1690851-1690971 ( 59) GGCAAACA 1 chr3L:8093759-8093879 ( 23) GGCAAACA 1 chr3R:23445355-23445475 ( 70) GGCAAACA 1 chr3R:29831066-29831186 ( 90) GGCAAACA 1 chrX:768070-768190 ( 79) GGCAAACA 1 chr3R:6664521-6664641 ( 20) GGCAAACA 1 chr2L:171568-171688 ( 59) GGCAAACA 1 chr3L:8835028-8835148 ( 93) GGCAAACA 1 chr3R:12369925-12370045 ( 63) GGCAAACA 1 chr3L:7859825-7859945 ( 27) GGCAAACA 1 chr3L:3755785-3755905 ( 58) GGCAAACA 1 chr2R:11403180-11403300 ( 78) GGCAAACA 1 chr3R:22635132-22635252 ( 93) GGCAAACA 1 chr3L:8689826-8689946 ( 64) AGCAAACA 1 chr2R:14077581-14077701 ( 98) AGCAAACA 1 chr3R:31549290-31549410 ( 49) AGCAAACA 1 chr2R:24746023-24746143 ( 106) AGCAAACA 1 chrX:18580806-18580926 ( 86) AGCAAACA 1 chr3L:14988406-14988526 ( 69) AGCAAACA 1 chr3R:31603821-31603941 ( 67) AGCAAACA 1 chr3L:14447075-14447195 ( 71) AGCAAACA 1 chr3L:15689699-15689819 ( 56) AGCAAACA 1 chr2L:5303741-5303861 ( 44) AGCAAACA 1 chrX:515829-515949 ( 97) AGCAAACA 1 chr3L:18242259-18242379 ( 45) GGCAAATA 1 chr2L:9775343-9775463 ( 108) GGCAAATA 1 chr3L:19184217-19184337 ( 54) GGCAAATA 1 chr3R:15983659-15983779 ( 35) GGCAAATA 1 chr2R:10212477-10212597 ( 113) GGCAAATA 1 chr3L:15548938-15549058 ( 48) TGCAAACA 1 chr2L:6643575-6643695 ( 66) TGCAAACA 1 chr2L:2864746-2864866 ( 22) TGCAAACA 1 chr3L:14274837-14274957 ( 26) GGCAAATA 1 chr3L:3390608-3390728 ( 74) TGCAAACA 1 chr3L:18846311-18846431 ( 82) GGCAAATA 1 chr3L:1742819-1742939 ( 6) GGCAAATA 1 chr2R:15249402-15249522 ( 113) GGCAAATA 1 chr3L:5785370-5785490 ( 29) TGCAAACA 1 chr2R:22162343-22162463 ( 18) AGCAAATA 1 chr2R:22200022-22200142 ( 58) AGCAAATA 1 chrX:12947792-12947912 ( 26) AGCAAATA 1 chr3R:6401064-6401184 ( 98) AGCAAATA 1 chr2L:12509587-12509707 ( 87) AGCAAATA 1 chrX:3967746-3967866 ( 29) AGCAAATA 1 chr3L:17656825-17656945 ( 9) AGCAAATA 1 chrX:6720106-6720226 ( 20) AGCAAATA 1 chr3R:8318002-8318122 ( 52) AGCAAATA 1 chrX:15497873-15497993 ( 17) AGCAAATA 1 chr2L:7628527-7628647 ( 89) TGCAAATA 1 chr3R:11993409-11993529 ( 92) TGCAAATA 1 chr2R:8242615-8242735 ( 61) TGCAAATA 1 chr3L:17419501-17419621 ( 74) GGTAAACA 1 chr3R:23134840-23134960 ( 11) GGTAAACA 1 chr3R:29548902-29549022 ( 80) TGCAAATA 1 chr3R:24293266-24293386 ( 80) AGTAAACA 1 chr2R:6464949-6465069 ( 71) AGTAAACA 1 chr2L:16523224-16523344 ( 47) AGTAAACA 1 chr2R:23615226-23615346 ( 48) AGTAAACA 1 chr3L:15814144-15814264 ( 100) AGTAAACA 1 chr3R:29480097-29480217 ( 53) AGTAAACA 1 chr2L:21037855-21037975 ( 51) TGTAAACA 1 chr3R:23947143-23947263 ( 63) GGTAAATA 1 chr3L:1578454-1578574 ( 47) GGTAAATA 1 chr3L:5807506-5807626 ( 106) TGTAAACA 1 chr2R:9266577-9266697 ( 37) TGTAAACA 1 chr2L:7571925-7572045 ( 86) TGTAAACA 1 chr3R:24544469-24544589 ( 50) TGTAAACA 1 chr2R:13532022-13532142 ( 43) GGTAAATA 1 chr2L:19998295-19998415 ( 75) GGTAAATA 1 chr2L:18717527-18717647 ( 31) GACAAACA 1 chr2R:2262391-2262511 ( 9) TGTAAACA 1 chr2L:3549017-3549137 ( 58) GGTAAATA 1 chr2L:11961007-11961127 ( 52) TGTAAACA 1 chr2R:22546677-22546797 ( 108) CGCAAACA 1 chr3L:4025859-4025979 ( 62) CGCAAACA 1 chr2L:2906262-2906382 ( 45) CGCAAACA 1 chrX:3282115-3282235 ( 60) CGCAAACA 1 chr3L:17047909-17048029 ( 80) AGTAAATA 1 chr3L:12606438-12606558 ( 49) AGTAAATA 1 chr2R:14109805-14109925 ( 55) AGTAAATA 1 chr3R:15093061-15093181 ( 67) AACAAACA 1 chrX:15591772-15591892 ( 22) AACAAACA 1 chrX:768871-768991 ( 91) AACAAACA 1 chr3R:21271372-21271492 ( 98) AACAAACA 1 chr2R:21082672-21082792 ( 96) AGTAAATA 1 chr2R:15465952-15466072 ( 99) AACAAACA 1 chr2R:6573329-6573449 ( 50) GACAAATA 1 chr3L:18837948-18838068 ( 99) TGTAAATA 1 chr3R:21825283-21825403 ( 39) TGTAAATA 1 chr3L:17791602-17791722 ( 108) GACAAATA 1 chr2L:19937918-19938038 ( 52) TGTAAATA 1 chr3L:16488603-16488723 ( 64) GACAAATA 1 chr2L:2861594-2861714 ( 30) TGTAAATA 1 chr3R:14526803-14526923 ( 59) GACAAATA 1 chr2R:16820395-16820515 ( 46) GACAAATA 1 chr2L:7166014-7166134 ( 94) TGTAAATA 1 chr2L:10497554-10497674 ( 20) TGTAAATA 1 chr2R:6503149-6503269 ( 60) TACAAACA 1 chr3L:3932884-3933004 ( 26) AACAAATA 1 chr3L:21961999-21962119 ( 45) AACAAATA 1 chr2L:2168365-2168485 ( 50) AACAAATA 1 chr3L:11528532-11528652 ( 86) AACAAATA 1 chr3L:8347490-8347610 ( 72) TGCACACA 1 chr2L:1448305-1448425 ( 46) GGCACATA 1 chr3R:5746753-5746873 ( 82) AACAAATA 1 chr3R:28587022-28587142 ( 3) AGCACATA 1 chr2L:6818488-6818608 ( 59) TACAAATA 1 chrX:13645222-13645342 ( 51) TACAAATA 1 chr2L:892639-892759 ( 76) CGTAAACA 1 chr3R:22756403-22756523 ( 44) CGTAAACA 1 chr2R:6607635-6607755 ( 64) GGTACACA 1 chr2L:856158-856278 ( 40) AATAAACA 1 chr3R:15402788-15402908 ( 44) TGCACATA 1 chr2L:5113568-5113688 ( 31) AATAAACA 1 chrX:1183316-1183436 ( 41) AATAAACA 1 chr3R:5016471-5016591 ( 36) TATAAACA 1 chr3R:11869391-11869511 ( 56) TATAAACA 1 chr3L:16056368-16056488 ( 46) GATAAATA 1 chr3L:643180-643300 ( 73) CACAAACA 1 chr3R:21420005-21420125 ( 113) AATAAATA 1 chr3L:7782414-7782534 ( 56) AATAAATA 1 chr3L:6216126-6216246 ( 61) TGTACACA 1 chr2L:17448602-17448722 ( 92) TGTACACA 1 chr3L:18021011-18021131 ( 86) GACACACA 1 chr2L:3228818-3228938 ( 49) AATAAATA 1 chrX:12889212-12889332 ( 8) CGCACACA 1 chr3R:13799712-13799832 ( 103) TATAAATA 1 chr3R:15670666-15670786 ( 53) AACACACA 1 chr3L:20494096-20494216 ( 9) TATAAATA 1 chrX:7995214-7995334 ( 34) TATAAATA 1 chr2R:15515750-15515870 ( 64) AGTACATA 1 chr3L:22847752-22847872 ( 95) TATAAATA 1 chr2L:5044902-5045022 ( 12) TATAAATA 1 chr3R:7103591-7103711 ( 75) AACACACA 1 chr2L:22144249-22144369 ( 96) AGTACATA 1 chr3R:5320740-5320860 ( 63) TATAAATA 1 chr3R:28552395-28552515 ( 57) CACAAATA 1 chr2L:10505034-10505154 ( 58) CACAAATA 1 chr3L:11085880-11086000 ( 14) TGTACATA 1 chrX:13626023-13626143 ( 68) TGTACATA 1 chr2R:10013365-10013485 ( 30) TACACACA 1 chr3R:29891334-29891454 ( 53) GATACACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.41929 E= 2.3e-038 28 -153 48 -5 -3 -1379 180 -1379 -1379 159 -1379 41 172 -1379 -1379 -1379 154 -77 -1379 -1379 172 -1379 -1379 -1379 -1379 134 -1379 74 172 -1379 -1379 -1379 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 142 E= 2.3e-038 0.366197 0.070423 0.281690 0.281690 0.295775 0.000000 0.704225 0.000000 0.000000 0.612676 0.000000 0.387324 1.000000 0.000000 0.000000 0.000000 0.880282 0.119718 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.514085 0.000000 0.485915 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DGYAAAYA MEME-2 regular expression -------------------------------------------------------------------------------- [AGT][GA][CT]AAA[CT]A -------------------------------------------------------------------------------- Time 13.42 secs. ******************************************************************************** ******************************************************************************** MOTIF CGGCGGSS MEME-3 width = 8 sites = 22 llr = 204 E-value = 2.9e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C 7::a::64 probability G :aa:8946 matrix T 3:::21:: bits 2.3 * 2.1 *** 1.8 *** 1.6 *** * Relative 1.4 ******* Entropy 1.2 ******** (13.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGGCGGCG consensus T T GC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:19370198-19370318 61 2.86e-06 GTGAAAAGGG CGGCGGCG GGGTGACGAC chr3L:5807506-5807626 60 8.57e-06 ATTGAAGAGG CGGCGGCC AGGGGCCGAG chr3L:614871-614991 109 8.57e-06 ACTTTGTGTC CGGCGGCC CTCC chr3R:14472773-14472893 23 8.57e-06 ATCAGCGGCA CGGCGGCC TCTCTAATTA chr3R:23134840-23134960 37 8.57e-06 TACACGGCGT CGGCGGCC CAAAAAGATG chr2L:21037855-21037975 21 1.55e-05 CCACCAGCAG TGGCGGCG CTTGTTTGGT chr3R:29891334-29891454 22 1.55e-05 AGTTTTCAGG TGGCGGCG TTGTAATTTC chr3L:8689826-8689946 6 1.96e-05 ATTCC CGGCTGCG aaaaaaaaaa chr2R:19414607-19414727 65 1.96e-05 CGAATCCTAC CGGCTGCG ATGAAGTGTA chr3L:1690851-1690971 102 2.78e-05 TGGGGTTTTC TGGCGGGG ATGGCGCGGG chrX:6592201-6592321 16 2.78e-05 AGTGAATGGG TGGCGGGG GCGGGGGGGT chr2R:22158071-22158191 99 2.78e-05 GCAGGGATAA TGGCGGGG AATGTGCCCT chr3L:1742819-1742939 98 2.78e-05 AAATATTGGT TGGCGGCC CTCCCCACTG chr3R:29548902-29549022 40 3.61e-05 GTTTGCTCAT CGGCTGGG ACGTTCCAAC chr3R:18243711-18243831 44 4.43e-05 TGCGCAGCAG CGGCGTCG TCACCATGCC chr2L:16523224-16523344 78 4.43e-05 ACTTCGCTGC CGGCGTCG CAGTTGCTGC chr2R:6503149-6503269 84 4.43e-05 CAATTGGCGC CGGCGTCG GCAACAACAG chr2R:23740381-23740501 42 4.43e-05 CTCGGCCACT TGGCGGGC TAATATTTGA chr2L:7427572-7427692 76 5.43e-05 GATAGTGTTT CGGCTGGC TGATAAGCTA chr3R:15354088-15354208 99 5.43e-05 CAAGCAGCAG CGGCTGGC AACTAAATCA chr2L:22036989-22037109 97 6.83e-05 GTCGGGCAAA CGCCGGCG AAGGCTTTTT chr2L:7339694-7339814 103 1.02e-04 TTGCACTGAC CCGCGGGG AAAGGGGGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:19370198-19370318 2.9e-06 60_[+3]_52 chr3L:5807506-5807626 8.6e-06 59_[+3]_53 chr3L:614871-614991 8.6e-06 108_[+3]_4 chr3R:14472773-14472893 8.6e-06 22_[+3]_90 chr3R:23134840-23134960 8.6e-06 36_[+3]_76 chr2L:21037855-21037975 1.6e-05 20_[+3]_92 chr3R:29891334-29891454 1.6e-05 21_[+3]_91 chr3L:8689826-8689946 2e-05 5_[+3]_107 chr2R:19414607-19414727 2e-05 64_[+3]_48 chr3L:1690851-1690971 2.8e-05 101_[+3]_11 chrX:6592201-6592321 2.8e-05 15_[+3]_97 chr2R:22158071-22158191 2.8e-05 98_[+3]_14 chr3L:1742819-1742939 2.8e-05 97_[+3]_15 chr3R:29548902-29549022 3.6e-05 39_[+3]_73 chr3R:18243711-18243831 4.4e-05 43_[+3]_69 chr2L:16523224-16523344 4.4e-05 77_[+3]_35 chr2R:6503149-6503269 4.4e-05 83_[+3]_29 chr2R:23740381-23740501 4.4e-05 41_[+3]_71 chr2L:7427572-7427692 5.4e-05 75_[+3]_37 chr3R:15354088-15354208 5.4e-05 98_[+3]_14 chr2L:22036989-22037109 6.8e-05 96_[+3]_16 chr2L:7339694-7339814 0.0001 102_[+3]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGGCGGSS width=8 seqs=22 chr2L:19370198-19370318 ( 61) CGGCGGCG 1 chr3L:5807506-5807626 ( 60) CGGCGGCC 1 chr3L:614871-614991 ( 109) CGGCGGCC 1 chr3R:14472773-14472893 ( 23) CGGCGGCC 1 chr3R:23134840-23134960 ( 37) CGGCGGCC 1 chr2L:21037855-21037975 ( 21) TGGCGGCG 1 chr3R:29891334-29891454 ( 22) TGGCGGCG 1 chr3L:8689826-8689946 ( 6) CGGCTGCG 1 chr2R:19414607-19414727 ( 65) CGGCTGCG 1 chr3L:1690851-1690971 ( 102) TGGCGGGG 1 chrX:6592201-6592321 ( 16) TGGCGGGG 1 chr2R:22158071-22158191 ( 99) TGGCGGGG 1 chr3L:1742819-1742939 ( 98) TGGCGGCC 1 chr3R:29548902-29549022 ( 40) CGGCTGGG 1 chr3R:18243711-18243831 ( 44) CGGCGTCG 1 chr2L:16523224-16523344 ( 78) CGGCGTCG 1 chr2R:6503149-6503269 ( 84) CGGCGTCG 1 chr2R:23740381-23740501 ( 42) TGGCGGGC 1 chr2L:7427572-7427692 ( 76) CGGCTGGC 1 chr3R:15354088-15354208 ( 99) CGGCTGGC 1 chr2L:22036989-22037109 ( 97) CGCCGGCG 1 chr2L:7339694-7339814 ( 103) CCGCGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.3525 E= 2.9e+001 -1110 174 -1110 13 -1110 -216 224 -1110 -1110 -216 224 -1110 -1110 229 -1110 -1110 -1110 -1110 194 -36 -1110 -1110 210 -110 -1110 164 85 -1110 -1110 84 166 -1110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 22 E= 2.9e+001 0.000000 0.681818 0.000000 0.318182 0.000000 0.045455 0.954545 0.000000 0.000000 0.045455 0.954545 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.772727 0.227273 0.000000 0.000000 0.863636 0.136364 0.000000 0.636364 0.363636 0.000000 0.000000 0.363636 0.636364 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGGCGGSS MEME-3 regular expression -------------------------------------------------------------------------------- [CT]GGC[GT]G[CG][GC] -------------------------------------------------------------------------------- Time 19.13 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGGTGGT MEME-4 width = 8 sites = 4 llr = 48 E-value = 7.8e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G aaaa:aa: matrix T ::::a::a bits 2.3 **** ** 2.1 **** ** 1.8 ******** 1.6 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGGGTGGT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:20792829-20792949 76 5.79e-06 CGCTAGTTTA GGGGTGGT TCCGTTTCCG chr3R:26908863-26908983 43 5.79e-06 GGGCGGACAG GGGGTGGT GATATGCTAA chr2L:18717527-18717647 59 5.79e-06 CACCTCCAAG GGGGTGGT GGGGGGAAGC chrX:3282115-3282235 1 5.79e-06 . GGGGTGGT TATTAACCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:20792829-20792949 5.8e-06 75_[+4]_37 chr3R:26908863-26908983 5.8e-06 42_[+4]_70 chr2L:18717527-18717647 5.8e-06 58_[+4]_54 chrX:3282115-3282235 5.8e-06 [+4]_112 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGGTGGT width=8 seqs=4 chr3L:20792829-20792949 ( 76) GGGGTGGT 1 chr3R:26908863-26908983 ( 43) GGGGTGGT 1 chr2L:18717527-18717647 ( 59) GGGGTGGT 1 chrX:3282115-3282235 ( 1) GGGGTGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.7858 E= 7.8e+003 -865 -865 230 -865 -865 -865 230 -865 -865 -865 230 -865 -865 -865 230 -865 -865 -865 -865 177 -865 -865 230 -865 -865 -865 230 -865 -865 -865 -865 177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 4 E= 7.8e+003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGT MEME-4 regular expression -------------------------------------------------------------------------------- GGGGTGGT -------------------------------------------------------------------------------- Time 24.79 secs. ******************************************************************************** ******************************************************************************** MOTIF GGTGGGCG MEME-5 width = 8 sites = 3 llr = 37 E-value = 1.9e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C ::::::a: probability G aa:aaa:a matrix T ::a::::: bits 2.3 ** ***** 2.1 ** ***** 1.8 ******** 1.6 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.9 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGTGGGCG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:11085880-11086000 47 4.05e-06 AAATTTGTAG GGTGGGCG ATAAAAATAG chr3L:20792829-20792949 110 4.05e-06 GTCCGCGGGC GGTGGGCG TGG chr2R:24746023-24746143 8 4.05e-06 AGGTGTA GGTGGGCG CCTTTTGTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:11085880-11086000 4e-06 46_[+5]_66 chr3L:20792829-20792949 4e-06 109_[+5]_3 chr2R:24746023-24746143 4e-06 7_[+5]_105 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTGGGCG width=8 seqs=3 chr3L:11085880-11086000 ( 47) GGTGGGCG 1 chr3L:20792829-20792949 ( 110) GGTGGGCG 1 chr2R:24746023-24746143 ( 8) GGTGGGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.6483 E= 1.9e+004 -823 -823 230 -823 -823 -823 230 -823 -823 -823 -823 177 -823 -823 230 -823 -823 -823 230 -823 -823 -823 230 -823 -823 229 -823 -823 -823 -823 230 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 1.9e+004 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGGGCG MEME-5 regular expression -------------------------------------------------------------------------------- GGTGGGCG -------------------------------------------------------------------------------- Time 30.33 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:515829-515949 6.46e-03 96_[+2(3.58e-05)]_16 chr3R:22635132-22635252 9.17e-03 92_[+2(1.43e-05)]_10_[+1(4.82e-05)]_\ 2 chr2R:11403180-11403300 2.63e-02 77_[+2(1.43e-05)]_35 chr3R:29548902-29549022 6.33e-04 27_[+1(4.82e-05)]_4_[+3(3.61e-05)]_\ 73 chr2R:15465952-15466072 9.76e-02 120 chr2R:23740381-23740501 3.04e-03 41_[+3(4.43e-05)]_71 chr2R:9269501-9269621 4.04e-01 120 chrX:15497873-15497993 5.24e-01 120 chr2L:5610208-5610328 4.26e-01 120 chr2L:11961007-11961127 2.84e-01 120 chr3L:5785370-5785490 1.15e-02 28_[+2(7.70e-05)]_84 chr3R:5746753-5746873 8.08e-01 120 chr2R:14314471-14314591 1.33e-01 120 chr2R:15249402-15249522 1.30e-01 112_[+2(7.70e-05)] chr3R:30062124-30062244 2.16e-01 120 chrX:6439625-6439745 1.01e-01 120 chr2L:16541769-16541889 9.88e-01 120 chr3L:1742819-1742939 5.56e-04 5_[+2(7.70e-05)]_84_[+3(2.78e-05)]_\ 15 chr2R:18202726-18202846 6.46e-02 120 chr2R:12458253-12458373 1.02e-01 62_[+1(4.82e-05)]_50 chr3R:12728398-12728518 9.84e-01 120 chr2R:22158071-22158191 3.57e-02 98_[+3(2.78e-05)]_14 chr3L:18846311-18846431 1.46e-01 81_[+2(7.70e-05)]_31 chr2L:5303741-5303861 1.29e-02 43_[+2(3.58e-05)]_69 chr2R:21082672-21082792 1.28e-01 120 chr2L:1448305-1448425 1.16e-01 120 chr2L:425603-425723 4.87e-01 120 chr3L:15689699-15689819 9.48e-02 55_[+2(3.58e-05)]_57 chr2R:6503149-6503269 2.25e-02 83_[+3(4.43e-05)]_29 chr3L:14447075-14447195 1.88e-03 70_[+2(3.58e-05)]_42 chr3L:3390608-3390728 1.17e-01 73_[+2(7.70e-05)]_39 chrX:1183316-1183436 1.38e-01 120 chr2L:3549017-3549137 8.26e-02 120 chr3L:1489645-1489765 1.22e-02 120 chr2L:10497554-10497674 7.87e-03 120 chr3L:14274837-14274957 3.88e-03 25_[+2(7.70e-05)]_87 chr3L:3755785-3755905 1.85e-01 57_[+2(1.43e-05)]_55 chr2L:7166014-7166134 3.45e-05 29_[+4(3.39e-05)]_83 chr3R:15354088-15354208 1.83e-02 98_[+3(5.43e-05)]_14 chr2L:3228818-3228938 2.40e-01 120 chr3R:21271372-21271492 3.30e-01 120 chr2R:16820395-16820515 2.62e-05 54_[+1(4.82e-05)]_27_[+4(3.39e-05)]_\ 23 chr2R:13723369-13723489 2.11e-01 36_[+1(4.82e-05)]_76 chr3L:616268-616388 9.02e-01 120 chr3L:11253463-11253583 9.14e-02 120 chr3R:30489917-30490037 1.16e-01 91_[+1(4.82e-05)]_21 chr2R:2262391-2262511 2.34e-01 120 chrX:3282115-3282235 6.67e-04 [+4(5.79e-06)]_112 chr3L:16056368-16056488 3.09e-02 35_[+1(4.82e-05)]_77 chr2L:18717527-18717647 1.36e-04 58_[+4(5.79e-06)]_54 chr3R:27067512-27067632 2.52e-02 5_[+1(4.82e-05)]_107 chr3R:31603821-31603941 2.61e-02 66_[+2(3.58e-05)]_46 chr3L:11788306-11788426 3.37e-02 38_[+1(1.22e-05)]_74 chr3L:14988406-14988526 9.48e-03 68_[+2(3.58e-05)]_44 chr3L:4272340-4272460 4.30e-01 120 chr2L:2906262-2906382 6.58e-02 120 chr2R:9756256-9756376 3.89e-01 120 chr3R:14526803-14526923 8.35e-02 120 chr3R:8318002-8318122 2.80e-01 120 chr3R:10169229-10169349 1.25e-01 98_[+1(4.82e-05)]_14 chr2L:9614072-9614192 1.42e-01 120 chr3L:13489340-13489460 1.56e-01 120 chr2R:9060152-9060272 9.23e-01 120 chr3R:19000019-19000139 6.81e-03 71_[+2(7.70e-05)]_41 chr2L:15324193-15324313 6.59e-01 120 chr3R:22756403-22756523 1.30e-01 120 chrX:6720106-6720226 1.50e-01 120 chr2L:19998295-19998415 5.69e-03 10_[+1(1.22e-05)]_102 chrX:18580806-18580926 4.44e-03 19_[+1(4.82e-05)]_58_[+2(3.58e-05)]_\ 27 chr3R:23134840-23134960 2.08e-04 36_[+3(8.57e-06)]_76 chr2R:18675656-18675776 1.68e-02 56_[+1(1.22e-05)]_56 chrX:13645222-13645342 3.17e-01 120 chr2L:2864746-2864866 3.41e-02 21_[+2(7.70e-05)]_91 chr3L:8347490-8347610 3.78e-01 120 chr2L:8576581-8576701 2.04e-01 120 chr3R:5320740-5320860 3.46e-01 120 chr2R:13532022-13532142 3.02e-02 120 chr2L:5113568-5113688 5.19e-01 120 chr3R:15402788-15402908 3.53e-02 120 chr3L:19845661-19845781 3.82e-01 120 chr2L:2861594-2861714 2.82e-02 9_[+1(1.22e-05)]_103 chr3R:14472773-14472893 1.09e-04 2_[+1(6.66e-05)]_12_[+3(8.57e-06)]_\ 90 chr3R:17818927-17819047 4.77e-01 120 chr2L:7427572-7427692 1.95e-01 75_[+3(5.43e-05)]_37 chr3L:7859825-7859945 4.74e-02 26_[+2(1.43e-05)]_52_[+2(7.70e-05)]_\ 26 chr3L:16488603-16488723 3.43e-01 120 chr3L:7367911-7368031 8.39e-01 120 chr2L:8165919-8166039 3.79e-02 120 chr3R:29480097-29480217 1.26e-01 120 chr2R:20999316-20999436 5.49e-01 120 chr3L:18021011-18021131 2.98e-02 120 chr3L:17656825-17656945 4.37e-02 120 chr2L:19937918-19938038 3.32e-02 120 chrX:768871-768991 6.17e-01 120 chr2R:24746023-24746143 1.42e-03 7_[+5(4.05e-06)]_90_[+2(3.58e-05)]_\ 7 chr3R:15677783-15677903 1.70e-01 120 chr2L:17448602-17448722 3.74e-01 120 chr2R:19414607-19414727 9.98e-04 64_[+3(1.96e-05)]_35_[+1(4.82e-05)]_\ 5 chr2R:23656719-23656839 7.72e-01 120 chr3L:15814144-15814264 7.20e-02 120 chr3R:24544469-24544589 5.07e-01 120 chr2L:7571925-7572045 3.95e-03 120 chr3R:9390356-9390476 4.42e-02 120 chr2R:23615226-23615346 3.13e-01 120 chr2R:6153464-6153584 1.13e-01 120 chr2L:4364994-4365114 6.94e-01 120 chr2L:6643575-6643695 1.89e-02 65_[+2(7.70e-05)]_47 chr2L:10505034-10505154 1.91e-02 120 chr3L:18833392-18833512 3.19e-01 120 chr3L:14549345-14549465 8.22e-01 120 chr2R:18801204-18801324 1.85e-01 120 chr2L:16523224-16523344 5.43e-04 77_[+3(4.43e-05)]_35 chr3R:6973358-6973478 8.23e-01 120 chr3R:12369925-12370045 6.94e-03 10_[+2(1.43e-05)]_27_[+2(1.43e-05)]_\ 9_[+2(1.43e-05)]_50 chr2L:5096967-5097087 6.02e-01 120 chr3L:8835028-8835148 2.32e-04 76_[+1(4.82e-05)]_8_[+2(1.43e-05)]_\ 20 chr3L:17791602-17791722 3.05e-02 26_[+1(1.22e-05)]_86 chr2L:892639-892759 1.94e-01 120 chrX:3967746-3967866 3.59e-02 120 chr2L:20840559-20840679 6.36e-01 120 chr2R:9266577-9266697 2.96e-01 120 chr3L:3134239-3134359 2.56e-01 120 chrX:4691345-4691465 6.31e-01 120 chr3L:15548938-15549058 5.32e-03 47_[+2(7.70e-05)]_51_[+1(1.22e-05)]_\ 6 chrX:14727691-14727811 9.84e-01 120 chr2L:3555839-3555959 8.16e-01 120 chr2L:7828902-7829022 6.60e-02 68_[+1(4.82e-05)]_44 chr3L:10862001-10862121 3.34e-01 120 chr3R:12657100-12657220 2.52e-01 76_[+1(4.82e-05)]_36 chr3L:614871-614991 1.20e-02 108_[+3(8.57e-06)]_4 chrX:5737226-5737346 5.01e-01 120 chr2R:22205680-22205800 6.33e-01 120 chr3R:11243209-11243329 8.66e-01 120 chr3R:28552395-28552515 1.41e-01 120 chrX:6592201-6592321 2.75e-05 15_[+3(2.78e-05)]_2_[+4(3.39e-05)]_\ 18_[+1(6.66e-05)]_61 chr3L:11107583-11107703 3.28e-01 30_[+1(4.82e-05)]_82 chr3R:11869391-11869511 3.35e-01 120 chr3R:31549290-31549410 2.08e-02 48_[+2(3.58e-05)]_64 chr3L:17419501-17419621 5.59e-02 120 chr2L:12509587-12509707 2.23e-01 120 chrX:14840761-14840881 7.09e-02 120 chr2R:8242615-8242735 4.53e-02 120 chr2L:12465843-12465963 2.47e-01 120 chr3L:643180-643300 1.68e-02 120 chr2L:22144249-22144369 7.35e-02 120 chr3R:6401064-6401184 8.22e-02 120 chr3R:14300090-14300210 3.77e-01 120 chr2L:19370198-19370318 1.06e-03 60_[+3(2.86e-06)]_52 chr2L:171568-171688 7.65e-02 58_[+2(1.43e-05)]_54 chrX:5664351-5664471 2.88e-01 120 chr3R:6664521-6664641 1.52e-02 19_[+2(1.43e-05)]_5_[+2(3.58e-05)]_\ 80 chr3R:7103591-7103711 1.79e-01 120 chrX:4458044-4458164 1.67e-01 88_[+1(4.82e-05)]_24 chr2L:5044902-5045022 5.83e-01 120 chr3R:5016471-5016591 9.59e-02 120 chr2L:22036989-22037109 9.53e-04 69_[+2(7.70e-05)]_19_[+3(6.83e-05)]_\ 16 chrX:12947792-12947912 1.20e-01 120 chr2L:856158-856278 6.46e-01 120 chr2L:3121776-3121896 1.36e-01 120 chr3L:22847752-22847872 1.71e-01 120 chrX:13570394-13570514 5.39e-01 120 chr3R:11993409-11993529 3.04e-03 120 chr3R:10093575-10093695 7.11e-02 25_[+1(4.82e-05)]_87 chr2R:14077581-14077701 5.00e-02 97_[+2(3.58e-05)]_15 chr2L:1094785-1094905 9.31e-02 120 chr2R:6464949-6465069 3.61e-01 120 chrX:19608179-19608299 8.61e-02 13_[+1(4.82e-05)]_99 chr2R:21193502-21193622 1.90e-01 120 chr2R:15515750-15515870 3.77e-01 120 chrX:768070-768190 2.81e-03 78_[+2(1.43e-05)]_34 chr3L:19040458-19040578 7.51e-01 120 chr3L:8683911-8684031 4.03e-01 120 chrX:7995214-7995334 6.95e-01 120 chr2R:10212477-10212597 2.02e-02 112_[+2(7.70e-05)] chr3R:29891334-29891454 7.91e-05 21_[+3(1.55e-05)]_11_[+1(1.22e-05)]_\ 72 chr2R:6607635-6607755 7.06e-02 120 chr2L:7628527-7628647 6.07e-02 120 chr2R:11633065-11633185 5.45e-01 120 chr3R:21825283-21825403 2.90e-01 120 chr3R:15983659-15983779 2.81e-02 34_[+2(7.70e-05)]_3_[+1(4.82e-05)]_\ 67 chr3R:26908863-26908983 1.47e-03 42_[+4(5.79e-06)]_70 chr3L:17539061-17539181 7.09e-01 120 chr3R:29831066-29831186 4.68e-03 22_[+1(4.82e-05)]_59_[+2(1.43e-05)]_\ 23 chrX:12889212-12889332 5.86e-01 120 chr3L:14354677-14354797 9.84e-02 120 chr3R:20276154-20276274 2.36e-01 34_[+1(4.82e-05)]_78 chr3R:23803798-23803918 1.85e-01 120 chr3L:18837948-18838068 5.52e-01 120 chrX:18238037-18238157 3.61e-01 120 chr2L:19285587-19285707 8.63e-01 120 chr2L:6818488-6818608 1.28e-01 120 chr3R:18243711-18243831 1.26e-01 43_[+3(4.43e-05)]_69 chr3R:28587022-28587142 5.74e-02 112_[+1(4.82e-05)] chr3L:20792829-20792949 3.06e-05 75_[+4(5.79e-06)]_26_[+5(4.05e-06)]_\ 3 chr3R:23445355-23445475 1.31e-03 69_[+2(1.43e-05)]_43 chr3L:20494096-20494216 3.74e-01 120 chr2R:6573329-6573449 2.86e-01 120 chr3L:5807506-5807626 3.46e-05 6_[+1(1.22e-05)]_45_[+3(8.57e-06)]_\ 53 chr3L:11528532-11528652 6.17e-01 120 chr3L:10680009-10680129 9.50e-01 120 chr3R:15670666-15670786 2.68e-01 120 chr2R:22200022-22200142 1.26e-01 120 chr3L:20954230-20954350 2.82e-01 120 chr3R:28556491-28556611 9.61e-01 120 chr3L:4025859-4025979 1.47e-01 120 chr3R:11312517-11312637 7.41e-02 120 chrX:15591772-15591892 6.64e-02 120 chr3L:15591281-15591401 6.80e-01 120 chr2R:22162343-22162463 5.30e-02 120 chr2L:8084522-8084642 3.80e-02 120 chr3R:15093061-15093181 2.53e-01 120 chr2R:6788316-6788436 5.94e-01 120 chr2R:14109805-14109925 1.82e-01 120 chr3L:1578454-1578574 6.91e-01 120 chr3R:13799712-13799832 9.17e-01 120 chr3L:8093759-8093879 7.10e-04 22_[+2(1.43e-05)]_90 chr2R:22546677-22546797 3.22e-01 120 chr2L:2168365-2168485 1.40e-01 120 chr3R:23947143-23947263 1.16e-02 120 chr2L:11210440-11210560 4.70e-01 120 chr3L:20406409-20406529 4.52e-01 120 chr2R:10013365-10013485 4.03e-01 120 chr3R:10636184-10636304 9.99e-01 120 chrX:13626023-13626143 8.72e-03 120 chr3R:24293266-24293386 2.11e-01 120 chr3L:11085880-11086000 3.54e-04 46_[+5(4.05e-06)]_66 chr2L:21037855-21037975 1.64e-04 20_[+3(1.55e-05)]_12_[+1(4.82e-05)]_\ 72 chr3L:21961999-21962119 2.43e-01 120 chr2L:7339694-7339814 1.14e-02 88_[+1(4.82e-05)]_24 chr2R:9309639-9309759 5.31e-02 120 chrX:10582191-10582311 4.01e-01 120 chr3R:24031626-24031746 7.71e-02 120 chr3L:19184217-19184337 1.31e-02 53_[+2(7.70e-05)]_59 chr3L:6216126-6216246 2.56e-01 120 chr3L:2647825-2647945 4.48e-02 120 chr3L:8741316-8741436 2.45e-01 120 chr3L:12606438-12606558 1.83e-01 120 chr2L:9775343-9775463 2.05e-02 99_[+1(4.82e-05)]_[+2(7.70e-05)]_5 chr3L:1690851-1690971 2.01e-05 58_[+2(1.43e-05)]_35_[+3(2.78e-05)]_\ 11 chr3L:18242259-18242379 2.91e-01 2_[+2(7.70e-05)]_34_[+2(7.70e-05)]_\ 68 chr3R:15129021-15129141 9.69e-01 120 chr2R:6023200-6023320 2.19e-02 120 chr3L:8689826-8689946 4.17e-04 5_[+3(1.96e-05)]_50_[+2(3.58e-05)]_\ 49 chr3L:17047909-17048029 1.50e-01 120 chr3L:7782414-7782534 9.49e-03 74_[+1(1.22e-05)]_38 chr3L:3932884-3933004 9.86e-02 120 chr3R:21420005-21420125 4.49e-01 120 chr3L:3518943-3519063 3.76e-01 120 chr2L:6291748-6291868 8.67e-02 120 chr3R:10521285-10521405 7.52e-02 108_[+1(1.22e-05)]_4 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n01.farnam.hpc.yale.internal ********************************************************************************