******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG3995.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2L:7498347-7498467 1.0000 120 chr3L:3952011-3952131 1.0000 120 chr3R:23377427-23377547 1.0000 120 chr3R:17379019-17379139 1.0000 120 chr2R:9540868-9540988 1.0000 120 chrX:9029522-9029642 1.0000 120 chrX:2187735-2187855 1.0000 120 chrX:22461357-22461477 1.0000 120 chrX:1654916-1655036 1.0000 120 chr2L:15613652-15613772 1.0000 120 chr2R:17493648-17493768 1.0000 120 chr2R:6161840-6161960 1.0000 120 chr3R:18450040-18450160 1.0000 120 chr2L:18358171-18358291 1.0000 120 chr2R:9031935-9032055 1.0000 120 chr3L:9183995-9184115 1.0000 120 chrX:18945642-18945762 1.0000 120 chrX:130694-130814 1.0000 120 chrX:1642211-1642331 1.0000 120 chr2L:9777219-9777339 1.0000 120 chr2R:22168058-22168178 1.0000 120 chrX:14478665-14478785 1.0000 120 chr2R:18957159-18957279 1.0000 120 chr3L:2146026-2146146 1.0000 120 chrX:12978146-12978266 1.0000 120 chrX:1099819-1099939 1.0000 120 chr3R:14334063-14334183 1.0000 120 chr3R:26956040-26956160 1.0000 120 chr2R:8013784-8013904 1.0000 120 chr3L:11135027-11135147 1.0000 120 chrX:8177585-8177705 1.0000 120 chr3R:7094501-7094621 1.0000 120 chr2L:8438155-8438275 1.0000 120 chr3R:6239120-6239240 1.0000 120 chr2R:13895412-13895532 1.0000 120 chr2L:14351612-14351732 1.0000 120 chr3R:9782676-9782796 1.0000 120 chr2L:2060733-2060853 1.0000 120 chr3R:15803585-15803705 1.0000 120 chrX:16927112-16927232 1.0000 120 chr3L:11765355-11765475 1.0000 120 chr3L:11132176-11132296 1.0000 120 chrX:5705236-5705356 1.0000 120 chr3R:22669317-22669437 1.0000 120 chr2L:12133459-12133579 1.0000 120 chrX:7776791-7776911 1.0000 120 chr2L:248735-248855 1.0000 120 chr2L:12110466-12110586 1.0000 120 chr2L:15275010-15275130 1.0000 120 chr3L:5669788-5669908 1.0000 120 chr4:458232-458352 1.0000 120 chrX:19276891-19277011 1.0000 120 chr3R:11459731-11459851 1.0000 120 chr3R:21658893-21659013 1.0000 120 chr2R:5776451-5776571 1.0000 120 chr3R:15206508-15206628 1.0000 120 chr3L:11135237-11135357 1.0000 120 chr2R:14324682-14324802 1.0000 120 chr2R:21786082-21786202 1.0000 120 chrX:21503287-21503407 1.0000 120 chr2R:17852250-17852370 1.0000 120 chr3R:24927060-24927180 1.0000 120 chr3L:20673580-20673700 1.0000 120 chr2R:12899725-12899845 1.0000 120 chr3R:6593201-6593321 1.0000 120 chrX:18320879-18320999 1.0000 120 chr3R:5287443-5287563 1.0000 120 chrX:18094319-18094439 1.0000 120 chr3R:27238121-27238241 1.0000 120 chr2L:21706-21826 1.0000 120 chr3L:10451848-10451968 1.0000 120 chr2L:5148051-5148171 1.0000 120 chr3R:12858228-12858348 1.0000 120 chr3R:30425780-30425900 1.0000 120 chr3L:4252951-4253071 1.0000 120 chr2L:20681438-20681558 1.0000 120 chrX:11472501-11472621 1.0000 120 chr3R:26958288-26958408 1.0000 120 chr3R:24931919-24932039 1.0000 120 chr3R:21584403-21584523 1.0000 120 chrX:4319403-4319523 1.0000 120 chr3R:20635335-20635455 1.0000 120 chr2R:18194640-18194760 1.0000 120 chr3R:22613564-22613684 1.0000 120 chr3L:18745745-18745865 1.0000 120 chr3L:7094773-7094893 1.0000 120 chrX:5705440-5705560 1.0000 120 chr3R:5296713-5296833 1.0000 120 chr2L:18835-18955 1.0000 120 chr2L:10648134-10648254 1.0000 120 chr2R:12565780-12565900 1.0000 120 chr2L:21071590-21071710 1.0000 120 chr3L:1748364-1748484 1.0000 120 chr3R:11128238-11128358 1.0000 120 chr2L:10646848-10646968 1.0000 120 chr3L:15987773-15987893 1.0000 120 chrX:21503491-21503611 1.0000 120 chr2L:7447957-7448077 1.0000 120 chr3L:4187770-4187890 1.0000 120 chr2L:18323095-18323215 1.0000 120 chr2L:12435797-12435917 1.0000 120 chr2R:14875801-14875921 1.0000 120 chr2R:24031220-24031340 1.0000 120 chrX:15574516-15574636 1.0000 120 chr3R:31842480-31842600 1.0000 120 chr3L:3142716-3142836 1.0000 120 chr3L:12928868-12928988 1.0000 120 chr2L:15038856-15038976 1.0000 120 chr2L:1398179-1398299 1.0000 120 chrX:9909409-9909529 1.0000 120 chr2L:4596252-4596372 1.0000 120 chrX:17821625-17821745 1.0000 120 chr3R:4717697-4717817 1.0000 120 chr3R:24661817-24661937 1.0000 120 chr3L:8688795-8688915 1.0000 120 chr3L:9777098-9777218 1.0000 120 chr2L:21220585-21220705 1.0000 120 chr3R:7093728-7093848 1.0000 120 chr3R:31726432-31726552 1.0000 120 chr3L:15696428-15696548 1.0000 120 chr3R:21072075-21072195 1.0000 120 chr2R:14886973-14887093 1.0000 120 chrX:16791205-16791325 1.0000 120 chr3R:17646147-17646267 1.0000 120 chr2R:5608520-5608640 1.0000 120 chr3R:11669788-11669908 1.0000 120 chr2L:21676571-21676691 1.0000 120 chr2L:8123881-8124001 1.0000 120 chrX:17372326-17372446 1.0000 120 chrX:15732055-15732175 1.0000 120 chr2R:22420309-22420429 1.0000 120 chr3L:3169236-3169356 1.0000 120 chr2L:15039081-15039201 1.0000 120 chrX:8906194-8906314 1.0000 120 chr3L:3668920-3669040 1.0000 120 chrX:9550699-9550819 1.0000 120 chr3L:11765564-11765684 1.0000 120 chr3R:29313215-29313335 1.0000 120 chr2L:3426976-3427096 1.0000 120 chr3R:15473687-15473807 1.0000 120 chr3L:4252639-4252759 1.0000 120 chr3R:11500002-11500122 1.0000 120 chrX:15737099-15737219 1.0000 120 chr3L:16113105-16113225 1.0000 120 chr3L:7519487-7519607 1.0000 120 chr3R:7541090-7541210 1.0000 120 chrX:8896930-8897050 1.0000 120 chrX:16792012-16792132 1.0000 120 chrX:17656772-17656892 1.0000 120 chr3R:12628713-12628833 1.0000 120 chr3R:14655954-14656074 1.0000 120 chr3R:23758518-23758638 1.0000 120 chrX:6350359-6350479 1.0000 120 chr3L:3376677-3376797 1.0000 120 chr2L:17381756-17381876 1.0000 120 chr3R:30496467-30496587 1.0000 120 chrX:6350559-6350679 1.0000 120 chr3R:11483431-11483551 1.0000 120 chr2R:19415069-19415189 1.0000 120 chrX:11725686-11725806 1.0000 120 chr2L:18606750-18606870 1.0000 120 chr2L:20860121-20860241 1.0000 120 chr3L:21023885-21024005 1.0000 120 chr3L:18905006-18905126 1.0000 120 chr3R:26213115-26213235 1.0000 120 chrX:4671388-4671508 1.0000 120 chrX:19579503-19579623 1.0000 120 chrX:21369579-21369699 1.0000 120 chr3R:14451077-14451197 1.0000 120 chrX:123966-124086 1.0000 120 chr2R:24195716-24195836 1.0000 120 chr3R:23787057-23787177 1.0000 120 chrX:8116897-8117017 1.0000 120 chr2R:16867692-16867812 1.0000 120 chr2L:15609261-15609381 1.0000 120 chr3L:3398652-3398772 1.0000 120 chr3L:13860182-13860302 1.0000 120 chrX:16320665-16320785 1.0000 120 chrX:6261017-6261137 1.0000 120 chrX:15710914-15711034 1.0000 120 chr2L:18444597-18444717 1.0000 120 chr2R:19464216-19464336 1.0000 120 chr3R:16043072-16043192 1.0000 120 chr2L:10396543-10396663 1.0000 120 chr2L:5081703-5081823 1.0000 120 chr3L:834088-834208 1.0000 120 chr2R:22420953-22421073 1.0000 120 chrX:19695187-19695307 1.0000 120 chr2R:5760728-5760848 1.0000 120 chr3L:21274392-21274512 1.0000 120 chrX:10387088-10387208 1.0000 120 chrX:16499506-16499626 1.0000 120 chr3R:26966325-26966445 1.0000 120 chr3R:19154013-19154133 1.0000 120 chrX:17078733-17078853 1.0000 120 chr2R:11306870-11306990 1.0000 120 chr3L:1570252-1570372 1.0000 120 chr3R:22724230-22724350 1.0000 120 chrX:19667541-19667661 1.0000 120 chrX:16303782-16303902 1.0000 120 chr3R:16647503-16647623 1.0000 120 chr3R:14655730-14655850 1.0000 120 chr3L:8185402-8185522 1.0000 120 chr2L:8302943-8303063 1.0000 120 chr3R:9512458-9512578 1.0000 120 chr4:1198752-1198872 1.0000 120 chr3R:24054391-24054511 1.0000 120 chr3L:20487270-20487390 1.0000 120 chr2R:11691159-11691279 1.0000 120 chr3L:12791747-12791867 1.0000 120 chr2R:16001246-16001366 1.0000 120 chr2R:15708170-15708290 1.0000 120 chr2L:2493206-2493326 1.0000 120 chr2R:21181168-21181288 1.0000 120 chr3L:21823397-21823517 1.0000 120 chr3R:14626226-14626346 1.0000 120 chrX:13492290-13492410 1.0000 120 chr2L:8305520-8305640 1.0000 120 chr3R:5268732-5268852 1.0000 120 chr3L:12146119-12146239 1.0000 120 chr3R:13833659-13833779 1.0000 120 chr4:393279-393399 1.0000 120 chr3L:18905213-18905333 1.0000 120 chrX:12763547-12763667 1.0000 120 chr3R:31405928-31406048 1.0000 120 chr2R:19129243-19129363 1.0000 120 chr3R:17002890-17003010 1.0000 120 chrX:16836082-16836202 1.0000 120 chrX:23007668-23007788 1.0000 120 chrX:19696956-19697076 1.0000 120 chr3R:8430600-8430720 1.0000 120 chr3L:2166870-2166990 1.0000 120 chrX:2112740-2112860 1.0000 120 chr3L:22871534-22871654 1.0000 120 chr2R:7132472-7132592 1.0000 120 chr3R:27185878-27185998 1.0000 120 chr2R:24057193-24057313 1.0000 120 chr3L:16587109-16587229 1.0000 120 chr2R:10125688-10125808 1.0000 120 chr2R:23753305-23753425 1.0000 120 chr3L:20394799-20394919 1.0000 120 chr3R:25049556-25049676 1.0000 120 chr3L:15137317-15137437 1.0000 120 chr3L:7338893-7339013 1.0000 120 chr3R:18585302-18585422 1.0000 120 chr3L:7993210-7993330 1.0000 120 chr3L:20541673-20541793 1.0000 120 chr3R:5213659-5213779 1.0000 120 chrX:16441745-16441865 1.0000 120 chr3L:3937953-3938073 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG3995/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG3995.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.291 C 0.21 G 0.211 T 0.288 Background letter frequencies (from file dataset with add-one prior applied): A 0.291 C 0.21 G 0.211 T 0.288 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ACWGTSAC MEME-1 width = 8 sites = 185 llr = 1265 E-value = 1.9e-084 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 5:5:::a: pos.-specific C 171::4:8 probability G 2:1a:6:: matrix T 233:a::2 bits 2.3 * 2.0 * 1.8 * * 1.6 ** ** Relative 1.4 ***** Entropy 1.1 * ***** (9.9 bits) 0.9 * ***** 0.7 * ***** 0.5 * ***** 0.2 ******** 0.0 -------- Multilevel ACAGTGAC consensus GTT C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:16441745-16441865 47 1.39e-05 AATGAAAATC ACAGTGAC GACCAGCGAT chrX:19696956-19697076 37 1.39e-05 TATAGCCCTT ACAGTGAC AGAGAACTTC chr4:393279-393399 15 1.39e-05 TTGGAAGAAT ACAGTGAC TGTCTATATG chr2L:8302943-8303063 65 1.39e-05 TCTCCGCAAA ACAGTGAC TCATTCACAG chrX:16499506-16499626 38 1.39e-05 cgtgacagtg acagtgac agtgacagtg chrX:21369579-21369699 87 1.39e-05 CCACTAAAAA ACAGTGAC ATTTTTCCAT chr2L:18323095-18323215 41 1.39e-05 gactcgtcgg acagtgac tgttactgcg chr3L:10451848-10451968 20 1.39e-05 ATTTTCAGTC ACAGTGAC TGACAGCCGT chrX:18320879-18320999 15 1.39e-05 ACACCCGTGT ACAGTGAC CGTCTGCGAT chr2R:12899725-12899845 87 1.39e-05 TTGTCCGGGA ACAGTGAC TGCCCTTCCT chr2R:14324682-14324802 81 1.39e-05 ATCAAGCAAA ACAGTGAC TGGATTTATT chr3L:11132176-11132296 56 1.39e-05 GACCGATGAA ACAGTGAC CGTGGCGGGA chr2L:14351612-14351732 84 1.39e-05 AGCGACATAA ACAGTGAC TAAGTGTTTA chr3R:26956040-26956160 52 1.39e-05 TAGTCCAATC ACAGTGAC GTGAATTAAA chr3L:2146026-2146146 36 1.39e-05 ATCATAAATC ACAGTGAC AAATCGCAAT chr2L:9777219-9777339 80 1.39e-05 TGGGTTTTTC ACAGTGAC AGCATGACTA chrX:18945642-18945762 46 1.39e-05 ACTGCGAGTC ACAGTGAC AGTCACAGTT chrX:22461357-22461477 66 1.39e-05 agtcacgttc acagtgac agccacattc chrX:13492290-13492410 37 4.16e-05 ATAAATATAc acagtcac cgagcgagtc chr2R:15708170-15708290 23 4.16e-05 GGGcactgtg actgtgac tacctcgccg chr3R:9512458-9512578 81 4.16e-05 TCACTGAGTC ACTGTGAC TAGGCGCTTA chr2R:19464216-19464336 39 4.16e-05 TGACCGAGAG ACTGTGAC TTTTACTGCG chrX:9550699-9550819 39 4.16e-05 GTGACTGTGA ACTGTGAC CAGTGACCAG chr3R:21072075-21072195 13 4.16e-05 AGATTAGAAT ACTGTGAC TTTACAGGTG chr3L:9777098-9777218 44 4.16e-05 CATGACGGTG ACTGTGAC TGTGACTGTG chr2L:4596252-4596372 80 4.16e-05 GAAGTCAGTC ACAGTCAC ATTTTAATGT chr2L:15038856-15038976 88 4.16e-05 TCCACTTTAC ACTGTGAC TGCTAAAATA chr3L:4187770-4187890 44 4.16e-05 AATCGCAGTC ACAGTCAC AGTTGCACAC chr2L:10646848-10646968 46 4.16e-05 agtcacaggc acagtcac aggctcagtc chr3R:5287443-5287563 79 4.16e-05 CCGTCCGTCC ACTGTGAC GATTCGAGGG chr3R:6593201-6593321 52 4.16e-05 GGCTTAAGTC ACAGTCAC AGTTTTGGGT chr2R:21786082-21786202 68 4.16e-05 gtgggagtga actgtgac tgcgaatgtg chr3R:21658893-21659013 59 4.16e-05 GATCGCGTGC ACAGTCAC AGCATCCCTT chrX:19276891-19277011 77 4.16e-05 AATACCGAAA ACTGTGAC ATTACCGTTA chr3L:5669788-5669908 69 4.16e-05 tgtcatagtc acagtcac gAACTACATT chr2L:2060733-2060853 71 4.16e-05 agtcaccgtt acagtcac agtGGTTGTG chr2R:18957159-18957279 36 4.16e-05 AGCACcagtc acagtcac agccatagtc chrX:1642211-1642331 65 4.16e-05 agtcgcagtc acagtcac GCAATTCGGT chr3L:9183995-9184115 54 4.16e-05 tgtgactgta actgtgac tcttactgtg chr2R:9031935-9032055 37 4.16e-05 CTTTTGACAG ACTGTGAC AGGCTGTGAC chr2L:18358171-18358291 75 4.16e-05 tcggactgtg actgtgac tctgattgtg chrX:1654916-1655036 37 4.16e-05 agtcacagcc acagtcac agtcacagtc chr3R:17379019-17379139 66 4.16e-05 gtgatcggaa actgtgac tgcgactgcA chr3R:23377427-23377547 63 4.16e-05 tgcgaccgtt actgtgac tgcgactgag chr3R:22724230-22724350 49 6.54e-05 ATGGAAAAGG GCAGTGAC TCTGTGGGGG chr3R:11669788-11669908 67 6.54e-05 GAATTTGGAG GCAGTGAC AGTGAAGACG chrX:17821625-17821745 36 6.54e-05 tgtcactgtc actgtcac tgttactgtt chrX:16927112-16927232 8 6.54e-05 AAATTCA ACTGTCAC TGCCATAACA chrX:12978146-12978266 40 6.54e-05 gtcactggtt actgtcac cgtcacgggC chr2R:10125688-10125808 37 8.55e-05 AAACCTGTTC GCAGTCAC CGCAAAAATT chr3R:8430600-8430720 96 8.55e-05 CGGAGGTGTT GCTGTGAC ATTGTTTGTA chr3L:21023885-21024005 70 8.55e-05 TCACCGAGCC GCAGTCAC AAAGCTACCC chr3L:3668920-3669040 34 8.55e-05 GTATTTATTG Gcagtcac tgtcacaatc chrX:17372326-17372446 8 8.55e-05 AACTTTT GCAGTCAC AGTTTTCACA chrX:21503491-21503611 44 8.55e-05 ACTTCTTTTA GCAGTCAC TGTTTTAAGT chr2L:10648134-10648254 44 8.55e-05 AGTCTCAGTT GCAGTCAC AGTTTAATTC chr2R:18194640-18194760 70 8.55e-05 CGTGACTCTG GCTGTGAC TGCGACTGTG chr3L:20673580-20673700 7 8.55e-05 CCAGTC GCAGTCAC AATAATCACT chr2R:5776451-5776571 77 8.55e-05 tatgactatg gctgtgac tgtggccatg chr3R:11459731-11459851 81 8.55e-05 ATGGCTGGTT GCTGTGAC AGCATCACTG chr3R:14334063-14334183 26 8.55e-05 GTATTCGGCG GCAGTCAC TGTGAATTTC chr2R:22168058-22168178 1 8.55e-05 . GCTGTGAC TCAACTGGGG chr3R:18450040-18450160 49 8.55e-05 CAAAAGTCAC GCAGTCAC TTCAATTACA chr2L:7498347-7498467 44 8.55e-05 agtcacagta gcagtcac ggcaacagta chr3R:18585302-18585422 54 9.54e-05 CTTTATCGCT GCTGTCAC AGTTATCGAA chr3L:20394799-20394919 70 9.54e-05 AAGTAGCGTA GCTGTCAC TGTTCAGGTC chr3R:14626226-14626346 95 9.54e-05 TATCCGTGAC GCTGTCAC CTACACCGAG chr2L:18606750-18606870 18 9.54e-05 TATTTGTATG GCTGTCAC TGTTATTTTA chr3R:24931919-24932039 92 9.54e-05 AACCCTGGCC GCTGTCAC TTGCTTTTTG chrX:19695187-19695307 66 1.09e-04 AAAAGTTGTC TCAGTGAC AAATAGCGCC chrX:1099819-1099939 25 1.09e-04 CCTTTCGGAT TCAGTGAC TGCACccagt chr3L:20487270-20487390 58 1.19e-04 CCCCATGAAA ACGGTGAC TAAACTCACT chr3L:21823397-21823517 103 1.76e-04 AATAGTGAAC TCAGTCAC AACAAATAGC chr3R:16647503-16647623 62 1.76e-04 CGAATGTAAT TCTGTGAC ATCGATAACA chr2R:11306870-11306990 36 1.76e-04 ATCTTTCGAC ACCGTGAC GCGAGCGGCA chr3R:7093728-7093848 48 1.76e-04 CGAATAGTTC TCAGTCAC TGAGAGATAT chr2L:21071590-21071710 43 1.76e-04 AGAGAGGGAT TCAGTCAC GACTTGGTAA chr3L:7094773-7094893 47 1.76e-04 CGCCGTTACT TCAGTCAC TCGCGATCAC chr3R:21584403-21584523 22 1.76e-04 CCTGTGCATC ACCGTGAC TTACCATACC chr3L:4252951-4253071 74 1.76e-04 GCTTCCATTC ACCGTGAC TGAAAAATCG chrX:18094319-18094439 105 1.76e-04 AATCGTCAAT TCTGTGAC AGCCAGTT chrX:14478665-14478785 67 1.76e-04 GGTCACTTCT TCAGTCAC CGCTTTCTTT chrX:21503287-21503407 14 1.86e-04 GCCACCGGGA ACGGTCAC GGGTTCGCAA chr3L:11135027-11135147 45 1.86e-04 TTCTCCCGCC ACGGTCAC TGTTTCATCG chr3R:5213659-5213779 74 2.57e-04 TAAACTTTGC ATAGTCAC AGTTTTATTT chr3L:7338893-7339013 40 2.57e-04 CTTTGTCCAA ATTGTGAC TCCTTCGCGC chr3L:3398652-3398772 32 2.57e-04 TCACCTTCAG CCAGTGAC AATGCGACTG chr2R:24195716-24195836 99 2.57e-04 GTGCAGACAC TCTGTCAC TGTGATCAGG chr3R:11483431-11483551 68 2.57e-04 CCCTGTTGGC CCAGTGAC TTGGCTTGGC chr3L:4252639-4252759 16 2.57e-04 TGTGAAATCT ATAGTCAC GAAACATTTC chrX:15732055-15732175 93 2.57e-04 GACATTATCG ATTGTGAC ATCGAATTTT chr2R:14886973-14887093 31 2.57e-04 ATCAGCGGTC ATTGTGAC CAAGAAACAA chrX:5705440-5705560 51 2.57e-04 TGCACAAGTC ATAGTCAC AGGTTACAAA chrX:2187735-2187855 64 2.57e-04 CGCTATTGGC CCAGTGAC TGTTATACAA chr3R:27185878-27185998 26 3.25e-04 TTCTGGGCAC CCAGTCAC AGTTTCGAGT chr2R:11691159-11691279 57 3.25e-04 ATAATCGTGA CCAGTCAC AGTTTAGCTA chr2L:17381756-17381876 66 3.25e-04 TAAGTCACGG ATTGTCAC AGCTTAATTC chrX:6350359-6350479 36 3.25e-04 AAAATACCAA GTAGTGAC GAAAATATAC chr3R:11500002-11500122 82 3.25e-04 gaaatcgcta gccgtgac tcgtgTTCGG chr2L:3426976-3427096 76 3.25e-04 GGATTCGCAA CCTGTGAC AAATGAAACA chrX:8906194-8906314 72 3.25e-04 TGCGTGCCTC GCCGTGAC AAAATAATCG chr3L:8688795-8688915 43 3.25e-04 cggatCGACT CCAGTCAC AGTCGCAGTT chr3R:15206508-15206628 4 3.25e-04 ATG ATTGTCAC TCAGAAAGTC chrX:5705236-5705356 9 3.25e-04 gtcactgt ccagtcac tgAAAGTCAC chr3R:7094501-7094621 38 3.25e-04 CCCTCGATAA GTAGTGAC TGCCCATCGG chr2R:8013784-8013904 77 3.25e-04 AAACAATCAC GTAGTGAC TCCTACTTGG chrX:16836082-16836202 60 3.51e-04 GTTCAAAATC ACAGTGAT CGCGTTAGCA chrX:15574516-15574636 44 3.51e-04 AATATGCACA ACAGTGAT ATCGCTTAAG chr2R:12565780-12565900 83 3.51e-04 ACTGCCGTTC ACAGTGAT TTTTATGTCA chrX:11472501-11472621 60 3.51e-04 ACTTTGCGAA ACAGTGAT TTTTACGAGC chr2L:12110466-12110586 47 3.51e-04 GTCCCTAGTG GCGGTCAC TTAAATGTGG chr2L:12133459-12133579 38 3.51e-04 TTGTGCTAAT ACAGTGAT TTTGGGACTT chr3R:23787057-23787177 54 3.96e-04 AATGAGCCAA GTTGTGAC TGTGGTTGTC chr4:458232-458352 27 3.96e-04 atataattac gttgtgac atcgataagt chrX:23007668-23007788 107 4.34e-04 CACTAAATCA ACTGTGAT TTCTAA chr2R:24031220-24031340 80 4.34e-04 ATTGCTAAGC ACTGTGAT TACAATCCGA chr2R:9540868-9540988 84 4.34e-04 GAACGATCAC ACTGTGAT GTTGAATTTC chrX:19667541-19667661 9 4.57e-04 TATACATA GTTGTCAC ACTTTTGCTT chr3R:30496467-30496587 48 4.57e-04 GCTCGCAGCA GTTGTCAC TTCACAGGCC chr3R:15473687-15473807 43 4.57e-04 CATTCACGTT GTTGTCAC GTCCCGAAAC chr3L:12791747-12791867 62 5.19e-04 AGCAACATTC GCAGTGAT TAATTCACTA chr4:1198752-1198872 68 5.19e-04 GCGATCACTT ACTGTCAT ATTCTCACCA chr3R:31726432-31726552 29 5.19e-04 AATATTCCAT TCCGTGAC TTTCCTCTGA chrX:15710914-15711034 109 5.43e-04 CCTTCGAAAT TCGGTCAC GTCC chr3R:20635335-20635455 62 5.43e-04 TTGCGATATT TCGGTCAC ACAGAGCGCT chr2R:17493648-17493768 87 5.43e-04 CAAGTGCTTT TCGGTCAC TTTTCTTTAT chr3L:7993210-7993330 71 6.31e-04 ACTGGCCGTG ATCGTGAC AGAGTGATTT chr3R:26966325-26966445 44 6.31e-04 GTAAAGACAA ATCGTGAC CAGTTGGGTA chr3R:12628713-12628833 27 6.31e-04 CCGATAAACA TTAGTCAC AAGTGCAGAG chr2L:1398179-1398299 76 6.31e-04 ATCGAATCGC ATCGTGAC ATTGTTATCA chr3R:5296713-5296833 35 6.31e-04 ATTTTGCTGG GCTGTGAT TTTATCAACT chr3R:22613564-22613684 50 6.31e-04 AATTTCTCTT TTTGTGAC CTCTTTGATC chr3L:3169236-3169356 55 6.53e-04 GGTCATCTGT ATGGTCAC ACTGTTTTCA chr3R:11128238-11128358 74 6.53e-04 TAATAATCTC ATGGTCAC GGAATGAGTA chr3L:1748364-1748484 50 6.53e-04 ACCCTTCCGC ATGGTCAC AGATTTCGTG chr3R:27238121-27238241 67 6.53e-04 GGTGTTCTCG ATGGTCAC GCTGTGTGTG chr3R:6239120-6239240 61 6.53e-04 ACTTATGTGA ATGGTCAC AACTTTAAAG chr2R:19129243-19129363 33 7.20e-04 CAAACACACT TTTGTCAC GACAACTTAA chr3R:19154013-19154133 8 7.20e-04 CACTGTT TTTGTCAC AAACATCAAA chr2L:18444597-18444717 105 7.20e-04 CACGGGATCC ATCGTCAC GCTCTCTT chr3L:12928868-12928988 107 7.20e-04 CTGTAGTGAG TTTGTCAC GGTTTC chrX:8177585-8177705 90 7.20e-04 ATGGAATGTC GCTGTCAT ATGTTTTCCG chr3R:4717697-4717817 74 7.70e-04 tgatttttaa TCAGTGAT CAGTGGTGGC chr3L:15987773-15987893 35 7.70e-04 TAGGCACGTT AGAGTGAC CGCAGCTAGA chr3R:12858228-12858348 112 7.70e-04 ATATTCAAAC TCAGTGAT T chrX:7776791-7776911 4 7.70e-04 CAG TCAGTGAT GAGAAGTGAT chr2L:20860121-20860241 43 8.28e-04 GACGTGATTT CTAGTCAC TTTTATTTGC chr2R:23753305-23753425 49 9.44e-04 ACTTTCTAAG ATAGTGAT TAGGAACTGT chr3R:31405928-31406048 79 9.44e-04 CTGCTCCTCG GTGGTCAC AACTCACTGG chr3R:24054391-24054511 42 9.44e-04 TTTGTTGTTC TCTGTGAT TTTACGTAAT chr3L:21274392-21274512 69 9.44e-04 TCGCCGACGG TCAGTCAT GAAACTATGA chrX:16320665-16320785 84 9.44e-04 TTGAAAAATA GTGGTCAC TTTGAAATAA chr3L:7519487-7519607 56 9.44e-04 GAGCCGGAAa accgtgat ttgtgaactg chr3L:3142716-3142836 36 9.44e-04 AAGGCCACTT ATAGTGAT ATCGGAACAG chr3R:31842480-31842600 51 9.44e-04 ATCAACTTAC ACCGTGAT TCGTTACTGA chr2L:18835-18955 83 9.44e-04 TTTTGTGGGC AGTGTGAC CATGTCCAAT chr2L:20681438-20681558 34 9.44e-04 AGCCAGCCGA ACCGTGAT TGGATTCCTC chr3R:26958288-26958408 19 9.81e-04 ATCGCGTTGC CTTGTCAC GATATTCTCG chrX:2112740-2112860 14 1.10e-03 AAAAGCGTTG ATTGTGAT TCGAGTGACA chr2L:8123881-8124001 91 1.10e-03 CCGTGAAAAA ATTGTGAT TCGTTTTGAC chr2R:14875801-14875921 92 1.10e-03 TCGCACTTCT AGTGTCAC TGCTTTTGTT chr2R:22420309-22420429 54 1.13e-03 GTATCGGCAC TTGGTGAC TATCGATAAC chr3L:1570252-1570372 34 1.24e-03 TTTGCACGAG TTCGTGAC TCATTCGTTA chrX:19579503-19579623 59 1.24e-03 actggtagtg gtagtgat actgctactg chrX:8896930-8897050 40 1.24e-03 TGATATCAGA GTAGTGAT GGGTCCACAA chr3L:15696428-15696548 58 1.24e-03 TGATCACGGA CCTGTGAT CACCAATCAC chr2L:10396543-10396663 70 1.27e-03 TGCATTATTC TTGGTCAC TTTGTTTACA chr2L:248735-248855 19 1.27e-03 GGTTTGGTTT TTGGTCAC GCAATCATTT chr2L:12435797-12435917 90 1.36e-03 TCACTACAGA GGTGTCAC CAAATGGTGA chr2L:21706-21826 21 1.36e-03 ATAACGCAAT GTTGTGAT TTGTGGGCAG chr2L:7447957-7448077 112 1.39e-03 AGCATTTTAT TGAGTGAC G chr3R:14655954-14656074 47 1.46e-03 GTCGTAAGCT ACAGCCAC CGCCACCTTT chr3R:7541090-7541210 89 1.46e-03 ATTCACTGCT ACTGCGAC CTCACCTCTC chr3L:18905213-18905333 7 1.55e-03 AATAAT TTAGTGAT CCTTTAAGAA chr2L:2493206-2493326 31 1.55e-03 GCTGTGCAAC TTAGTGAT GAACGCGGAC chr3L:8185402-8185522 24 1.55e-03 CGCATGAAAC CTGGTCAC GGAATTCTTA chr3R:14451077-14451197 53 1.55e-03 GACTTTGATT TGAGTCAC AGTCAGTTCA chr3R:26213115-26213235 61 1.55e-03 AGATAAGCTA CTGGTCAC TTTCTAATCA chrX:11725686-11725806 37 1.55e-03 GCCTGTgtga tccgtgat acgtattccg chr3L:18745745-18745865 100 1.55e-03 CTCTCGTGTT CTGGTCAC ACTGTTATCT chr3R:22669317-22669437 90 1.55e-03 ATGGGGGAAT AGCGTGAC TAGTGCGGTA chrX:9029522-9029642 57 1.55e-03 CAAATTCAGA TGAGTCAC GGCTTGTAAG chr3R:23758518-23758638 21 1.78e-03 GTAAGTAGAA GCTGCGAC CTGCGTGCCA chr3R:24927060-24927180 66 1.88e-03 TCGTAAAATC ATCGTCAT GTTATTGGTA chr3R:16043072-16043192 73 2.03e-03 AGTGTCGTTA CTAGTCAT TTATACGTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:16441745-16441865 1.4e-05 46_[+1]_66 chrX:19696956-19697076 1.4e-05 36_[+1]_76 chr4:393279-393399 1.4e-05 14_[+1]_98 chr2L:8302943-8303063 1.4e-05 64_[+1]_48 chrX:16499506-16499626 1.4e-05 37_[+1]_75 chrX:21369579-21369699 1.4e-05 86_[+1]_26 chr2L:18323095-18323215 1.4e-05 40_[+1]_72 chr3L:10451848-10451968 1.4e-05 19_[+1]_93 chrX:18320879-18320999 1.4e-05 14_[+1]_98 chr2R:12899725-12899845 1.4e-05 86_[+1]_26 chr2R:14324682-14324802 1.4e-05 80_[+1]_32 chr3L:11132176-11132296 1.4e-05 55_[+1]_57 chr2L:14351612-14351732 1.4e-05 83_[+1]_29 chr3R:26956040-26956160 1.4e-05 51_[+1]_61 chr3L:2146026-2146146 1.4e-05 35_[+1]_77 chr2L:9777219-9777339 1.4e-05 79_[+1]_33 chrX:18945642-18945762 1.4e-05 45_[+1]_67 chrX:22461357-22461477 1.4e-05 65_[+1]_47 chrX:13492290-13492410 4.2e-05 36_[+1]_76 chr2R:15708170-15708290 4.2e-05 22_[+1]_90 chr3R:9512458-9512578 4.2e-05 80_[+1]_32 chr2R:19464216-19464336 4.2e-05 38_[+1]_74 chrX:9550699-9550819 4.2e-05 38_[+1]_74 chr3R:21072075-21072195 4.2e-05 12_[+1]_100 chr3L:9777098-9777218 4.2e-05 43_[+1]_69 chr2L:4596252-4596372 4.2e-05 79_[+1]_33 chr2L:15038856-15038976 4.2e-05 87_[+1]_25 chr3L:4187770-4187890 4.2e-05 43_[+1]_69 chr2L:10646848-10646968 4.2e-05 45_[+1]_67 chr3R:5287443-5287563 4.2e-05 78_[+1]_34 chr3R:6593201-6593321 4.2e-05 51_[+1]_61 chr2R:21786082-21786202 4.2e-05 67_[+1]_45 chr3R:21658893-21659013 4.2e-05 58_[+1]_54 chrX:19276891-19277011 4.2e-05 76_[+1]_36 chr3L:5669788-5669908 4.2e-05 68_[+1]_44 chr2L:2060733-2060853 4.2e-05 70_[+1]_42 chr2R:18957159-18957279 4.2e-05 35_[+1]_77 chrX:1642211-1642331 4.2e-05 64_[+1]_48 chr3L:9183995-9184115 4.2e-05 53_[+1]_59 chr2R:9031935-9032055 4.2e-05 36_[+1]_76 chr2L:18358171-18358291 4.2e-05 74_[+1]_38 chrX:1654916-1655036 4.2e-05 36_[+1]_76 chr3R:17379019-17379139 4.2e-05 65_[+1]_47 chr3R:23377427-23377547 4.2e-05 62_[+1]_50 chr3R:22724230-22724350 6.5e-05 48_[+1]_64 chr3R:11669788-11669908 6.5e-05 66_[+1]_46 chrX:17821625-17821745 6.5e-05 35_[+1]_77 chrX:16927112-16927232 6.5e-05 7_[+1]_105 chrX:12978146-12978266 6.5e-05 39_[+1]_73 chr2R:10125688-10125808 8.5e-05 36_[+1]_76 chr3R:8430600-8430720 8.5e-05 95_[+1]_17 chr3L:21023885-21024005 8.5e-05 69_[+1]_43 chr3L:3668920-3669040 8.5e-05 33_[+1]_79 chrX:17372326-17372446 8.5e-05 7_[+1]_105 chrX:21503491-21503611 8.5e-05 43_[+1]_69 chr2L:10648134-10648254 8.5e-05 43_[+1]_69 chr2R:18194640-18194760 8.5e-05 69_[+1]_43 chr3L:20673580-20673700 8.5e-05 6_[+1]_106 chr2R:5776451-5776571 8.5e-05 76_[+1]_36 chr3R:11459731-11459851 8.5e-05 80_[+1]_32 chr3R:14334063-14334183 8.5e-05 25_[+1]_87 chr2R:22168058-22168178 8.5e-05 [+1]_112 chr3R:18450040-18450160 8.5e-05 48_[+1]_64 chr2L:7498347-7498467 8.5e-05 43_[+1]_69 chr3R:18585302-18585422 9.5e-05 53_[+1]_59 chr3L:20394799-20394919 9.5e-05 69_[+1]_43 chr3R:14626226-14626346 9.5e-05 94_[+1]_18 chr2L:18606750-18606870 9.5e-05 17_[+1]_95 chr3R:24931919-24932039 9.5e-05 91_[+1]_21 chrX:19695187-19695307 0.00011 65_[+1]_47 chrX:1099819-1099939 0.00011 24_[+1]_88 chr3L:20487270-20487390 0.00012 57_[+1]_55 chr3L:21823397-21823517 0.00018 102_[+1]_10 chr3R:16647503-16647623 0.00018 61_[+1]_51 chr2R:11306870-11306990 0.00018 35_[+1]_77 chr3R:7093728-7093848 0.00018 47_[+1]_65 chr2L:21071590-21071710 0.00018 42_[+1]_70 chr3L:7094773-7094893 0.00018 46_[+1]_66 chr3R:21584403-21584523 0.00018 21_[+1]_91 chr3L:4252951-4253071 0.00018 73_[+1]_39 chrX:18094319-18094439 0.00018 104_[+1]_8 chrX:14478665-14478785 0.00018 66_[+1]_46 chrX:21503287-21503407 0.00019 13_[+1]_99 chr3L:11135027-11135147 0.00019 44_[+1]_68 chr3R:5213659-5213779 0.00026 73_[+1]_39 chr3L:7338893-7339013 0.00026 39_[+1]_73 chr3L:3398652-3398772 0.00026 31_[+1]_81 chr2R:24195716-24195836 0.00026 98_[+1]_14 chr3R:11483431-11483551 0.00026 67_[+1]_45 chr3L:4252639-4252759 0.00026 15_[+1]_97 chrX:15732055-15732175 0.00026 92_[+1]_20 chr2R:14886973-14887093 0.00026 30_[+1]_82 chrX:5705440-5705560 0.00026 50_[+1]_62 chrX:2187735-2187855 0.00026 63_[+1]_49 chr3R:27185878-27185998 0.00032 25_[+1]_87 chr2R:11691159-11691279 0.00032 56_[+1]_56 chr2L:17381756-17381876 0.00032 65_[+1]_47 chrX:6350359-6350479 0.00032 35_[+1]_77 chr3R:11500002-11500122 0.00032 81_[+1]_31 chr2L:3426976-3427096 0.00032 75_[+1]_37 chrX:8906194-8906314 0.00032 71_[+1]_41 chr3L:8688795-8688915 0.00032 42_[+1]_70 chr3R:15206508-15206628 0.00032 3_[+1]_109 chrX:5705236-5705356 0.00032 8_[+1]_104 chr3R:7094501-7094621 0.00032 37_[+1]_75 chr2R:8013784-8013904 0.00032 76_[+1]_36 chrX:16836082-16836202 0.00035 59_[+1]_53 chrX:15574516-15574636 0.00035 43_[+1]_69 chr2R:12565780-12565900 0.00035 82_[+1]_30 chrX:11472501-11472621 0.00035 59_[+1]_53 chr2L:12110466-12110586 0.00035 46_[+1]_66 chr2L:12133459-12133579 0.00035 37_[+1]_75 chr3R:23787057-23787177 0.0004 53_[+1]_59 chr4:458232-458352 0.0004 26_[+1]_86 chrX:23007668-23007788 0.00043 106_[+1]_6 chr2R:24031220-24031340 0.00043 79_[+1]_33 chr2R:9540868-9540988 0.00043 83_[+1]_29 chrX:19667541-19667661 0.00046 8_[+1]_104 chr3R:30496467-30496587 0.00046 47_[+1]_65 chr3R:15473687-15473807 0.00046 42_[+1]_70 chr3L:12791747-12791867 0.00052 61_[+1]_51 chr4:1198752-1198872 0.00052 67_[+1]_45 chr3R:31726432-31726552 0.00052 28_[+1]_84 chrX:15710914-15711034 0.00054 108_[+1]_4 chr3R:20635335-20635455 0.00054 61_[+1]_51 chr2R:17493648-17493768 0.00054 86_[+1]_26 chr3L:7993210-7993330 0.00063 70_[+1]_42 chr3R:26966325-26966445 0.00063 43_[+1]_69 chr3R:12628713-12628833 0.00063 26_[+1]_86 chr2L:1398179-1398299 0.00063 75_[+1]_37 chr3R:5296713-5296833 0.00063 34_[+1]_78 chr3R:22613564-22613684 0.00063 49_[+1]_63 chr3L:3169236-3169356 0.00065 54_[+1]_58 chr3R:11128238-11128358 0.00065 73_[+1]_39 chr3L:1748364-1748484 0.00065 49_[+1]_63 chr3R:27238121-27238241 0.00065 66_[+1]_46 chr3R:6239120-6239240 0.00065 60_[+1]_52 chr2R:19129243-19129363 0.00072 32_[+1]_80 chr3R:19154013-19154133 0.00072 7_[+1]_105 chr2L:18444597-18444717 0.00072 104_[+1]_8 chr3L:12928868-12928988 0.00072 106_[+1]_6 chrX:8177585-8177705 0.00072 89_[+1]_23 chr3R:4717697-4717817 0.00077 73_[+1]_39 chr3L:15987773-15987893 0.00077 34_[+1]_78 chr3R:12858228-12858348 0.00077 111_[+1]_1 chrX:7776791-7776911 0.00077 3_[+1]_109 chr2L:20860121-20860241 0.00083 42_[+1]_70 chr2R:23753305-23753425 0.00094 48_[+1]_64 chr3R:31405928-31406048 0.00094 78_[+1]_34 chr3R:24054391-24054511 0.00094 41_[+1]_71 chr3L:21274392-21274512 0.00094 68_[+1]_44 chrX:16320665-16320785 0.00094 83_[+1]_29 chr3L:7519487-7519607 0.00094 55_[+1]_57 chr3L:3142716-3142836 0.00094 35_[+1]_77 chr3R:31842480-31842600 0.00094 50_[+1]_62 chr2L:18835-18955 0.00094 82_[+1]_30 chr2L:20681438-20681558 0.00094 33_[+1]_79 chr3R:26958288-26958408 0.00098 18_[+1]_94 chrX:2112740-2112860 0.0011 13_[+1]_99 chr2L:8123881-8124001 0.0011 90_[+1]_22 chr2R:14875801-14875921 0.0011 91_[+1]_21 chr2R:22420309-22420429 0.0011 53_[+1]_59 chr3L:1570252-1570372 0.0012 33_[+1]_79 chrX:19579503-19579623 0.0012 58_[+1]_54 chrX:8896930-8897050 0.0012 39_[+1]_73 chr3L:15696428-15696548 0.0012 57_[+1]_55 chr2L:10396543-10396663 0.0013 69_[+1]_43 chr2L:248735-248855 0.0013 18_[+1]_94 chr2L:12435797-12435917 0.0014 89_[+1]_23 chr2L:21706-21826 0.0014 20_[+1]_92 chr2L:7447957-7448077 0.0014 111_[+1]_1 chr3R:14655954-14656074 0.0015 46_[+1]_66 chr3R:7541090-7541210 0.0015 88_[+1]_24 chr3L:18905213-18905333 0.0015 6_[+1]_106 chr2L:2493206-2493326 0.0015 30_[+1]_82 chr3L:8185402-8185522 0.0015 23_[+1]_89 chr3R:14451077-14451197 0.0015 52_[+1]_60 chr3R:26213115-26213235 0.0015 60_[+1]_52 chrX:11725686-11725806 0.0015 36_[+1]_76 chr3L:18745745-18745865 0.0015 99_[+1]_13 chr3R:22669317-22669437 0.0015 89_[+1]_23 chrX:9029522-9029642 0.0015 56_[+1]_56 chr3R:23758518-23758638 0.0018 20_[+1]_92 chr3R:24927060-24927180 0.0019 65_[+1]_47 chr3R:16043072-16043192 0.002 72_[+1]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACWGTSAC width=8 seqs=185 chrX:16441745-16441865 ( 47) ACAGTGAC 1 chrX:19696956-19697076 ( 37) ACAGTGAC 1 chr4:393279-393399 ( 15) ACAGTGAC 1 chr2L:8302943-8303063 ( 65) ACAGTGAC 1 chrX:16499506-16499626 ( 38) ACAGTGAC 1 chrX:21369579-21369699 ( 87) ACAGTGAC 1 chr2L:18323095-18323215 ( 41) ACAGTGAC 1 chr3L:10451848-10451968 ( 20) ACAGTGAC 1 chrX:18320879-18320999 ( 15) ACAGTGAC 1 chr2R:12899725-12899845 ( 87) ACAGTGAC 1 chr2R:14324682-14324802 ( 81) ACAGTGAC 1 chr3L:11132176-11132296 ( 56) ACAGTGAC 1 chr2L:14351612-14351732 ( 84) ACAGTGAC 1 chr3R:26956040-26956160 ( 52) ACAGTGAC 1 chr3L:2146026-2146146 ( 36) ACAGTGAC 1 chr2L:9777219-9777339 ( 80) ACAGTGAC 1 chrX:18945642-18945762 ( 46) ACAGTGAC 1 chrX:22461357-22461477 ( 66) ACAGTGAC 1 chrX:13492290-13492410 ( 37) ACAGTCAC 1 chr2R:15708170-15708290 ( 23) ACTGTGAC 1 chr3R:9512458-9512578 ( 81) ACTGTGAC 1 chr2R:19464216-19464336 ( 39) ACTGTGAC 1 chrX:9550699-9550819 ( 39) ACTGTGAC 1 chr3R:21072075-21072195 ( 13) ACTGTGAC 1 chr3L:9777098-9777218 ( 44) ACTGTGAC 1 chr2L:4596252-4596372 ( 80) ACAGTCAC 1 chr2L:15038856-15038976 ( 88) ACTGTGAC 1 chr3L:4187770-4187890 ( 44) ACAGTCAC 1 chr2L:10646848-10646968 ( 46) ACAGTCAC 1 chr3R:5287443-5287563 ( 79) ACTGTGAC 1 chr3R:6593201-6593321 ( 52) ACAGTCAC 1 chr2R:21786082-21786202 ( 68) ACTGTGAC 1 chr3R:21658893-21659013 ( 59) ACAGTCAC 1 chrX:19276891-19277011 ( 77) ACTGTGAC 1 chr3L:5669788-5669908 ( 69) ACAGTCAC 1 chr2L:2060733-2060853 ( 71) ACAGTCAC 1 chr2R:18957159-18957279 ( 36) ACAGTCAC 1 chrX:1642211-1642331 ( 65) ACAGTCAC 1 chr3L:9183995-9184115 ( 54) ACTGTGAC 1 chr2R:9031935-9032055 ( 37) ACTGTGAC 1 chr2L:18358171-18358291 ( 75) ACTGTGAC 1 chrX:1654916-1655036 ( 37) ACAGTCAC 1 chr3R:17379019-17379139 ( 66) ACTGTGAC 1 chr3R:23377427-23377547 ( 63) ACTGTGAC 1 chr3R:22724230-22724350 ( 49) GCAGTGAC 1 chr3R:11669788-11669908 ( 67) GCAGTGAC 1 chrX:17821625-17821745 ( 36) ACTGTCAC 1 chrX:16927112-16927232 ( 8) ACTGTCAC 1 chrX:12978146-12978266 ( 40) ACTGTCAC 1 chr2R:10125688-10125808 ( 37) GCAGTCAC 1 chr3R:8430600-8430720 ( 96) GCTGTGAC 1 chr3L:21023885-21024005 ( 70) GCAGTCAC 1 chr3L:3668920-3669040 ( 34) GCAGTCAC 1 chrX:17372326-17372446 ( 8) GCAGTCAC 1 chrX:21503491-21503611 ( 44) GCAGTCAC 1 chr2L:10648134-10648254 ( 44) GCAGTCAC 1 chr2R:18194640-18194760 ( 70) GCTGTGAC 1 chr3L:20673580-20673700 ( 7) GCAGTCAC 1 chr2R:5776451-5776571 ( 77) GCTGTGAC 1 chr3R:11459731-11459851 ( 81) GCTGTGAC 1 chr3R:14334063-14334183 ( 26) GCAGTCAC 1 chr2R:22168058-22168178 ( 1) GCTGTGAC 1 chr3R:18450040-18450160 ( 49) GCAGTCAC 1 chr2L:7498347-7498467 ( 44) GCAGTCAC 1 chr3R:18585302-18585422 ( 54) GCTGTCAC 1 chr3L:20394799-20394919 ( 70) GCTGTCAC 1 chr3R:14626226-14626346 ( 95) GCTGTCAC 1 chr2L:18606750-18606870 ( 18) GCTGTCAC 1 chr3R:24931919-24932039 ( 92) GCTGTCAC 1 chrX:19695187-19695307 ( 66) TCAGTGAC 1 chrX:1099819-1099939 ( 25) TCAGTGAC 1 chr3L:20487270-20487390 ( 58) ACGGTGAC 1 chr3L:21823397-21823517 ( 103) TCAGTCAC 1 chr3R:16647503-16647623 ( 62) TCTGTGAC 1 chr2R:11306870-11306990 ( 36) ACCGTGAC 1 chr3R:7093728-7093848 ( 48) TCAGTCAC 1 chr2L:21071590-21071710 ( 43) TCAGTCAC 1 chr3L:7094773-7094893 ( 47) TCAGTCAC 1 chr3R:21584403-21584523 ( 22) ACCGTGAC 1 chr3L:4252951-4253071 ( 74) ACCGTGAC 1 chrX:18094319-18094439 ( 105) TCTGTGAC 1 chrX:14478665-14478785 ( 67) TCAGTCAC 1 chrX:21503287-21503407 ( 14) ACGGTCAC 1 chr3L:11135027-11135147 ( 45) ACGGTCAC 1 chr3R:5213659-5213779 ( 74) ATAGTCAC 1 chr3L:7338893-7339013 ( 40) ATTGTGAC 1 chr3L:3398652-3398772 ( 32) CCAGTGAC 1 chr2R:24195716-24195836 ( 99) TCTGTCAC 1 chr3R:11483431-11483551 ( 68) CCAGTGAC 1 chr3L:4252639-4252759 ( 16) ATAGTCAC 1 chrX:15732055-15732175 ( 93) ATTGTGAC 1 chr2R:14886973-14887093 ( 31) ATTGTGAC 1 chrX:5705440-5705560 ( 51) ATAGTCAC 1 chrX:2187735-2187855 ( 64) CCAGTGAC 1 chr3R:27185878-27185998 ( 26) CCAGTCAC 1 chr2R:11691159-11691279 ( 57) CCAGTCAC 1 chr2L:17381756-17381876 ( 66) ATTGTCAC 1 chrX:6350359-6350479 ( 36) GTAGTGAC 1 chr3R:11500002-11500122 ( 82) GCCGTGAC 1 chr2L:3426976-3427096 ( 76) CCTGTGAC 1 chrX:8906194-8906314 ( 72) GCCGTGAC 1 chr3L:8688795-8688915 ( 43) CCAGTCAC 1 chr3R:15206508-15206628 ( 4) ATTGTCAC 1 chrX:5705236-5705356 ( 9) CCAGTCAC 1 chr3R:7094501-7094621 ( 38) GTAGTGAC 1 chr2R:8013784-8013904 ( 77) GTAGTGAC 1 chrX:16836082-16836202 ( 60) ACAGTGAT 1 chrX:15574516-15574636 ( 44) ACAGTGAT 1 chr2R:12565780-12565900 ( 83) ACAGTGAT 1 chrX:11472501-11472621 ( 60) ACAGTGAT 1 chr2L:12110466-12110586 ( 47) GCGGTCAC 1 chr2L:12133459-12133579 ( 38) ACAGTGAT 1 chr3R:23787057-23787177 ( 54) GTTGTGAC 1 chr4:458232-458352 ( 27) GTTGTGAC 1 chrX:23007668-23007788 ( 107) ACTGTGAT 1 chr2R:24031220-24031340 ( 80) ACTGTGAT 1 chr2R:9540868-9540988 ( 84) ACTGTGAT 1 chrX:19667541-19667661 ( 9) GTTGTCAC 1 chr3R:30496467-30496587 ( 48) GTTGTCAC 1 chr3R:15473687-15473807 ( 43) GTTGTCAC 1 chr3L:12791747-12791867 ( 62) GCAGTGAT 1 chr4:1198752-1198872 ( 68) ACTGTCAT 1 chr3R:31726432-31726552 ( 29) TCCGTGAC 1 chrX:15710914-15711034 ( 109) TCGGTCAC 1 chr3R:20635335-20635455 ( 62) TCGGTCAC 1 chr2R:17493648-17493768 ( 87) TCGGTCAC 1 chr3L:7993210-7993330 ( 71) ATCGTGAC 1 chr3R:26966325-26966445 ( 44) ATCGTGAC 1 chr3R:12628713-12628833 ( 27) TTAGTCAC 1 chr2L:1398179-1398299 ( 76) ATCGTGAC 1 chr3R:5296713-5296833 ( 35) GCTGTGAT 1 chr3R:22613564-22613684 ( 50) TTTGTGAC 1 chr3L:3169236-3169356 ( 55) ATGGTCAC 1 chr3R:11128238-11128358 ( 74) ATGGTCAC 1 chr3L:1748364-1748484 ( 50) ATGGTCAC 1 chr3R:27238121-27238241 ( 67) ATGGTCAC 1 chr3R:6239120-6239240 ( 61) ATGGTCAC 1 chr2R:19129243-19129363 ( 33) TTTGTCAC 1 chr3R:19154013-19154133 ( 8) TTTGTCAC 1 chr2L:18444597-18444717 ( 105) ATCGTCAC 1 chr3L:12928868-12928988 ( 107) TTTGTCAC 1 chrX:8177585-8177705 ( 90) GCTGTCAT 1 chr3R:4717697-4717817 ( 74) TCAGTGAT 1 chr3L:15987773-15987893 ( 35) AGAGTGAC 1 chr3R:12858228-12858348 ( 112) TCAGTGAT 1 chrX:7776791-7776911 ( 4) TCAGTGAT 1 chr2L:20860121-20860241 ( 43) CTAGTCAC 1 chr2R:23753305-23753425 ( 49) ATAGTGAT 1 chr3R:31405928-31406048 ( 79) GTGGTCAC 1 chr3R:24054391-24054511 ( 42) TCTGTGAT 1 chr3L:21274392-21274512 ( 69) TCAGTCAT 1 chrX:16320665-16320785 ( 84) GTGGTCAC 1 chr3L:7519487-7519607 ( 56) ACCGTGAT 1 chr3L:3142716-3142836 ( 36) ATAGTGAT 1 chr3R:31842480-31842600 ( 51) ACCGTGAT 1 chr2L:18835-18955 ( 83) AGTGTGAC 1 chr2L:20681438-20681558 ( 34) ACCGTGAT 1 chr3R:26958288-26958408 ( 19) CTTGTCAC 1 chrX:2112740-2112860 ( 14) ATTGTGAT 1 chr2L:8123881-8124001 ( 91) ATTGTGAT 1 chr2R:14875801-14875921 ( 92) AGTGTCAC 1 chr2R:22420309-22420429 ( 54) TTGGTGAC 1 chr3L:1570252-1570372 ( 34) TTCGTGAC 1 chrX:19579503-19579623 ( 59) GTAGTGAT 1 chrX:8896930-8897050 ( 40) GTAGTGAT 1 chr3L:15696428-15696548 ( 58) CCTGTGAT 1 chr2L:10396543-10396663 ( 70) TTGGTCAC 1 chr2L:248735-248855 ( 19) TTGGTCAC 1 chr2L:12435797-12435917 ( 90) GGTGTCAC 1 chr2L:21706-21826 ( 21) GTTGTGAT 1 chr2L:7447957-7448077 ( 112) TGAGTGAC 1 chr3R:14655954-14656074 ( 47) ACAGCCAC 1 chr3R:7541090-7541210 ( 89) ACTGCGAC 1 chr3L:18905213-18905333 ( 7) TTAGTGAT 1 chr2L:2493206-2493326 ( 31) TTAGTGAT 1 chr3L:8185402-8185522 ( 24) CTGGTCAC 1 chr3R:14451077-14451197 ( 53) TGAGTCAC 1 chr3R:26213115-26213235 ( 61) CTGGTCAC 1 chrX:11725686-11725806 ( 37) TCCGTGAT 1 chr3L:18745745-18745865 ( 100) CTGGTCAC 1 chr3R:22669317-22669437 ( 90) AGCGTGAC 1 chrX:9029522-9029642 ( 57) TGAGTCAC 1 chr3R:23758518-23758638 ( 21) GCTGCGAC 1 chr3R:24927060-24927180 ( 66) ATCGTCAT 1 chr3R:16043072-16043192 ( 73) CTAGTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.14534 E= 1.9e-084 79 -137 14 -65 -1418 169 -228 -4 66 -119 -96 24 -1418 -1418 225 -1418 -1418 -369 -1418 177 -1418 108 140 -1418 178 -1418 -1418 -1418 -1418 197 -1418 -69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 185 E= 1.9e-084 0.502703 0.081081 0.232432 0.183784 0.000000 0.675676 0.043243 0.281081 0.459459 0.091892 0.108108 0.340541 0.000000 0.000000 1.000000 0.000000 0.000000 0.016216 0.000000 0.983784 0.000000 0.443243 0.556757 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.821622 0.000000 0.178378 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACWGTSAC MEME-1 regular expression -------------------------------------------------------------------------------- [AG][CT][AT]GT[GC]AC -------------------------------------------------------------------------------- Time 7.83 secs. ******************************************************************************** ******************************************************************************** MOTIF GTCACWGY MEME-2 width = 8 sites = 52 llr = 444 E-value = 5.6e-014 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::a:3:1 pos.-specific C ::7:a::3 probability G a:3::1a2 matrix T :a:::5:5 bits 2.3 * * * 2.0 * * * 1.8 ** ** * 1.6 ** ** * Relative 1.4 ***** * Entropy 1.1 ***** * (12.3 bits) 0.9 ***** * 0.7 ***** * 0.5 ******* 0.2 ******** 0.0 -------- Multilevel GTCACTGT consensus G A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:13492290-13492410 64 1.36e-05 cacagtcgca gtcactgt tgcaattaca chr2R:15708170-15708290 56 1.36e-05 cactgtccgc gtcactgt GAAGTTCCGT chrX:17372326-17372446 59 1.36e-05 TTAATGGCGA GTCACTGT TGGCGCTATA chrX:17821625-17821745 27 1.36e-05 tactgttact gtcactgt cactgtcact chr3L:5669788-5669908 54 1.36e-05 ccgagtcacg gtcactgt catagtcaca chrX:5705236-5705356 1 1.36e-05 . gtcactgt ccagtcactg chr3L:11135027-11135147 63 1.36e-05 TGTTTCATCG GTCACTGT TTCATCGGTC chrX:22461357-22461477 45 1.36e-05 cacagtcgca gtcactgt tcaagtcacg chrX:2187735-2187855 84 1.36e-05 TTATACAAAA GTCACTGT TCTAATTGCG chr3R:22724230-22724350 2 3.74e-05 T GTCACAGT TGCGCACCGC chr3L:8688795-8688915 77 3.74e-05 TCCAGTCGCG GTCACAGT ACCCTAAGTT chr2L:10646848-10646968 7 3.74e-05 GTTACA GTCACAGT CGCAGGCACA chr2L:10648134-10648254 2 3.74e-05 A GTCACAGT TAGACTCACA chr2L:2060733-2060853 56 3.74e-05 tacagtcaca gtcacagt caccgttaca chr2R:18957159-18957279 85 3.74e-05 gtcacGGGCA GTCACAGT CGCAGCAGCA chrX:1642211-1642331 50 3.74e-05 cacagtcgca gtcacagt cgcagtcaca chrX:18945642-18945762 55 3.74e-05 CACAGTGACA GTCACAGT TAccgctccc chrX:1654916-1655036 46 3.74e-05 cacagtcaca gtcacagt cgcaatcacg chr2L:7498347-7498467 35 3.74e-05 TGAAGCGAGa gtcacagt agcagtcacg chr3R:17646147-17646267 59 4.74e-05 TATCAGCTAA GTCACTGG ATTGAAAACG chrX:12978146-12978266 30 4.74e-05 tggccacttg gtcactgg ttactgtcac chrX:14478665-14478785 32 4.74e-05 TCGACCACCT GTCACTGG TCACCGTTTT chr2L:9777219-9777339 65 4.74e-05 TCCCGCGGAG GTCACTGG GTTTTTCACA chrX:9550699-9550819 29 6.11e-05 CAGTAACTGC GTGACTGT GAACTGTGAC chr3L:9777098-9777218 53 6.11e-05 GACTGTGACT GTGACTGT GTCTGCTCAC chr2R:5776451-5776571 50 6.11e-05 GTCCGTTTCC gtgactgt ggctgtgact chr3L:9183995-9184115 45 6.11e-05 tactgtgact gtgactgt aactgtgact chr3R:23758518-23758638 56 7.12e-05 AGACCCAAAA GTCACAGC CCAAAACCAA chr3R:24931919-24932039 25 8.12e-05 ATTGGATTCA GTGACTGC AGTAAAGTGT chr3R:5287443-5287563 58 8.12e-05 GTATGAAGCT GTGACTGC GGTCCGTCCG chr2L:18358171-18358291 36 8.12e-05 TGCTGTCGct gtgactgc gactgtgact chr3R:17379019-17379139 43 8.12e-05 CGCTGATGCG GTgactgc gaactgtgat chr3R:23377427-23377547 48 8.12e-05 GACTTCgact gtgactgc gaccgttact chrX:16499506-16499626 29 1.15e-04 gatcgtgatc gtgacagt gacagtgaca chr3L:21274392-21274512 1 1.25e-04 . GTGACTGG GGTAAATCGT chrX:16792012-16792132 34 1.25e-04 TAAAAAATAA GTGACTGG TTCACCAGGA chr2R:21786082-21786202 83 1.25e-04 gactgcgaat gtgactgG TAGTCACATT chr3R:9512458-9512578 70 1.39e-04 ATTAATGCAC GTCACTGA GTCACTGTGA chr3L:1748364-1748484 67 1.39e-04 CAGATTTCGT GTCACTGA TTTGCCACCC chrX:2112740-2112860 26 1.56e-04 TGTGATTCGA GTGACAGC Gagaacagaa chr3R:12628713-12628833 58 1.56e-04 TGATTCCAGT GTCACGGC TTGAGTCACG chr2R:18194640-18194760 111 1.56e-04 CCACCCAAAG GTGACAGC CG chrX:11472501-11472621 20 1.56e-04 CCATAAGCCG GTCACGGC GAAGAGTTGT chr3R:6593201-6593321 37 1.56e-04 ACGCACTAGA GTCACGGC TTAAGTCACA chr2R:9031935-9032055 61 1.56e-04 TGACTCCACC GTGACAGC TAATTGCAGT chr3R:18450040-18450160 68 1.56e-04 TCAATTACAA GTCACGGC ATTTGCCGTC chr3R:8430600-8430720 62 1.74e-04 cgggtcacgg gtcacggg tcacgggtca chr3R:7093728-7093848 77 1.74e-04 TTGAATTTCT GTCACGGG ACAAAGGTTA chr3L:21023885-21024005 93 1.98e-04 TACCCACAAA GTCACAGA GCAACAATCG chr3L:4252639-4252759 90 1.98e-04 AATATGCTGA GTCACAGA GTTGTTGACT chrX:7776791-7776911 35 1.98e-04 GTGCGTTGAA GTCACAGA AAGAAACTGA chr3L:2146026-2146146 57 2.12e-04 TCGCAATCAC GTGACTGA ATGGCAGCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:13492290-13492410 1.4e-05 63_[+2]_49 chr2R:15708170-15708290 1.4e-05 55_[+2]_57 chrX:17372326-17372446 1.4e-05 58_[+2]_54 chrX:17821625-17821745 1.4e-05 26_[+2]_86 chr3L:5669788-5669908 1.4e-05 53_[+2]_59 chrX:5705236-5705356 1.4e-05 [+2]_112 chr3L:11135027-11135147 1.4e-05 62_[+2]_50 chrX:22461357-22461477 1.4e-05 44_[+2]_68 chrX:2187735-2187855 1.4e-05 83_[+2]_29 chr3R:22724230-22724350 3.7e-05 1_[+2]_111 chr3L:8688795-8688915 3.7e-05 76_[+2]_36 chr2L:10646848-10646968 3.7e-05 6_[+2]_106 chr2L:10648134-10648254 3.7e-05 1_[+2]_111 chr2L:2060733-2060853 3.7e-05 55_[+2]_57 chr2R:18957159-18957279 3.7e-05 84_[+2]_28 chrX:1642211-1642331 3.7e-05 49_[+2]_63 chrX:18945642-18945762 3.7e-05 54_[+2]_58 chrX:1654916-1655036 3.7e-05 45_[+2]_67 chr2L:7498347-7498467 3.7e-05 34_[+2]_78 chr3R:17646147-17646267 4.7e-05 58_[+2]_54 chrX:12978146-12978266 4.7e-05 29_[+2]_83 chrX:14478665-14478785 4.7e-05 31_[+2]_81 chr2L:9777219-9777339 4.7e-05 64_[+2]_48 chrX:9550699-9550819 6.1e-05 28_[+2]_84 chr3L:9777098-9777218 6.1e-05 52_[+2]_60 chr2R:5776451-5776571 6.1e-05 49_[+2]_63 chr3L:9183995-9184115 6.1e-05 44_[+2]_68 chr3R:23758518-23758638 7.1e-05 55_[+2]_57 chr3R:24931919-24932039 8.1e-05 24_[+2]_88 chr3R:5287443-5287563 8.1e-05 57_[+2]_55 chr2L:18358171-18358291 8.1e-05 35_[+2]_77 chr3R:17379019-17379139 8.1e-05 42_[+2]_70 chr3R:23377427-23377547 8.1e-05 47_[+2]_65 chrX:16499506-16499626 0.00012 28_[+2]_84 chr3L:21274392-21274512 0.00013 [+2]_112 chrX:16792012-16792132 0.00013 33_[+2]_79 chr2R:21786082-21786202 0.00013 82_[+2]_30 chr3R:9512458-9512578 0.00014 69_[+2]_43 chr3L:1748364-1748484 0.00014 66_[+2]_46 chrX:2112740-2112860 0.00016 25_[+2]_87 chr3R:12628713-12628833 0.00016 57_[+2]_55 chr2R:18194640-18194760 0.00016 110_[+2]_2 chrX:11472501-11472621 0.00016 19_[+2]_93 chr3R:6593201-6593321 0.00016 36_[+2]_76 chr2R:9031935-9032055 0.00016 60_[+2]_52 chr3R:18450040-18450160 0.00016 67_[+2]_45 chr3R:8430600-8430720 0.00017 61_[+2]_51 chr3R:7093728-7093848 0.00017 76_[+2]_36 chr3L:21023885-21024005 0.0002 92_[+2]_20 chr3L:4252639-4252759 0.0002 89_[+2]_23 chrX:7776791-7776911 0.0002 34_[+2]_78 chr3L:2146026-2146146 0.00021 56_[+2]_56 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTCACWGY width=8 seqs=52 chrX:13492290-13492410 ( 64) GTCACTGT 1 chr2R:15708170-15708290 ( 56) GTCACTGT 1 chrX:17372326-17372446 ( 59) GTCACTGT 1 chrX:17821625-17821745 ( 27) GTCACTGT 1 chr3L:5669788-5669908 ( 54) GTCACTGT 1 chrX:5705236-5705356 ( 1) GTCACTGT 1 chr3L:11135027-11135147 ( 63) GTCACTGT 1 chrX:22461357-22461477 ( 45) GTCACTGT 1 chrX:2187735-2187855 ( 84) GTCACTGT 1 chr3R:22724230-22724350 ( 2) GTCACAGT 1 chr3L:8688795-8688915 ( 77) GTCACAGT 1 chr2L:10646848-10646968 ( 7) GTCACAGT 1 chr2L:10648134-10648254 ( 2) GTCACAGT 1 chr2L:2060733-2060853 ( 56) GTCACAGT 1 chr2R:18957159-18957279 ( 85) GTCACAGT 1 chrX:1642211-1642331 ( 50) GTCACAGT 1 chrX:18945642-18945762 ( 55) GTCACAGT 1 chrX:1654916-1655036 ( 46) GTCACAGT 1 chr2L:7498347-7498467 ( 35) GTCACAGT 1 chr3R:17646147-17646267 ( 59) GTCACTGG 1 chrX:12978146-12978266 ( 30) GTCACTGG 1 chrX:14478665-14478785 ( 32) GTCACTGG 1 chr2L:9777219-9777339 ( 65) GTCACTGG 1 chrX:9550699-9550819 ( 29) GTGACTGT 1 chr3L:9777098-9777218 ( 53) GTGACTGT 1 chr2R:5776451-5776571 ( 50) GTGACTGT 1 chr3L:9183995-9184115 ( 45) GTGACTGT 1 chr3R:23758518-23758638 ( 56) GTCACAGC 1 chr3R:24931919-24932039 ( 25) GTGACTGC 1 chr3R:5287443-5287563 ( 58) GTGACTGC 1 chr2L:18358171-18358291 ( 36) GTGACTGC 1 chr3R:17379019-17379139 ( 43) GTGACTGC 1 chr3R:23377427-23377547 ( 48) GTGACTGC 1 chrX:16499506-16499626 ( 29) GTGACAGT 1 chr3L:21274392-21274512 ( 1) GTGACTGG 1 chrX:16792012-16792132 ( 34) GTGACTGG 1 chr2R:21786082-21786202 ( 83) GTGACTGG 1 chr3R:9512458-9512578 ( 70) GTCACTGA 1 chr3L:1748364-1748484 ( 67) GTCACTGA 1 chrX:2112740-2112860 ( 26) GTGACAGC 1 chr3R:12628713-12628833 ( 58) GTCACGGC 1 chr2R:18194640-18194760 ( 111) GTGACAGC 1 chrX:11472501-11472621 ( 20) GTCACGGC 1 chr3R:6593201-6593321 ( 37) GTCACGGC 1 chr2R:9031935-9032055 ( 61) GTGACAGC 1 chr3R:18450040-18450160 ( 68) GTCACGGC 1 chr3R:8430600-8430720 ( 62) GTCACGGG 1 chr3R:7093728-7093848 ( 77) GTCACGGG 1 chr3L:21023885-21024005 ( 93) GTCACAGA 1 chr3L:4252639-4252759 ( 90) GTCACAGA 1 chrX:7776791-7776911 ( 35) GTCACAGA 1 chr3L:2146026-2146146 ( 57) GTGACTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.0197 E= 5.6e-014 -1234 -1234 225 -1234 -1234 -1234 -1234 179 -1234 168 63 -1234 178 -1234 -1234 -1234 -1234 225 -1234 -1234 25 -1234 -87 90 -1234 -1234 225 -1234 -134 25 -28 68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 52 E= 5.6e-014 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.673077 0.326923 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.346154 0.000000 0.115385 0.538462 0.000000 0.000000 1.000000 0.000000 0.115385 0.250000 0.173077 0.461538 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACWGY MEME-2 regular expression -------------------------------------------------------------------------------- GT[CG]AC[TA]G[TC] -------------------------------------------------------------------------------- Time 14.01 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-3 width = 8 sites = 24 llr = 227 E-value = 2.8e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :9:::a:8 pos.-specific C :::a:::: probability G ::::a::: matrix T a1a:::a3 bits 2.3 ** 2.0 ** 1.8 ***** 1.6 * ***** Relative 1.4 * ***** Entropy 1.1 ******* (13.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:3937953-3938073 58 2.61e-05 AATAAATACT TATCGATA TTGTTCGGCA chr3L:15137317-15137437 16 2.61e-05 CGGTATCTAG TATCGATA TTTTTGGAAC chr3L:22871534-22871654 30 2.61e-05 GAGAGAAATG TATCGATA GCATCCGCTA chrX:12763547-12763667 97 2.61e-05 TTGCTGCTCA TATCGATA CATATGTATA chr3R:14655730-14655850 26 2.61e-05 CATTTCAATA TATCGATA TTTTTGAAGA chrX:16303782-16303902 95 2.61e-05 AACATATGTA TATCGATA ACTTTTTACC chr2R:5760728-5760848 94 2.61e-05 TAATATAATT TATCGATA GTTGATATTT chrX:6261017-6261137 81 2.61e-05 TTTGCACGCA TATCGATA CTTGATGCCA chr2L:18606750-18606870 49 2.61e-05 ACCCAACCGT TATCGATA AGTGTGTTGT chr2R:22420309-22420429 62 2.61e-05 ACTTGGTGAC TATCGATA ACGAACCGGA chr2R:5608520-5608640 77 2.61e-05 ATCCGAAAAA TATCGATA AATGTCTTAT chr3R:24661817-24661937 46 2.61e-05 TCGTTGAAGC TATCGATA AGCTCAAATC chr2L:248735-248855 48 2.61e-05 GGACGCAAGT TATCGATA GTTAAGCGCA chr2R:6161840-6161960 40 2.61e-05 ttttaatttt tatcgata ttccagaaat chr3L:12146119-12146239 32 5.19e-05 TTTACGCCCC TATCGATT TGGTATTCGA chr2L:8302943-8303063 93 5.19e-05 TCACCGCAGA TATCGATT AATGGTCTAT chr3R:16647503-16647623 113 5.19e-05 TGTTTCTCGA TATCGATT chrX:8906194-8906314 95 5.19e-05 AATCGAAAGA TATCGATT AATACTAACA chr2L:15038856-15038976 23 5.19e-05 CGAGCGGTGA TATCGATT GTACCTGCCT chr3R:18450040-18450160 15 5.19e-05 TACGCATTAT TATCGATT TGCGCACACA chr2R:16001246-16001366 41 7.77e-05 GATGGCCAAG TTTCGATA GCTCTTTCAC chr2R:22420953-22421073 54 7.77e-05 AATCGATAGA TTTCGATA GATTGGTTGA chr4:458232-458352 12 7.77e-05 aacaagagag tttcgata taattacgtt chrX:23007668-23007788 65 9.67e-05 CATAACGATT CATCGATA TTTTTCTTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:3937953-3938073 2.6e-05 57_[+3]_55 chr3L:15137317-15137437 2.6e-05 15_[+3]_97 chr3L:22871534-22871654 2.6e-05 29_[+3]_83 chrX:12763547-12763667 2.6e-05 96_[+3]_16 chr3R:14655730-14655850 2.6e-05 25_[+3]_87 chrX:16303782-16303902 2.6e-05 94_[+3]_18 chr2R:5760728-5760848 2.6e-05 93_[+3]_19 chrX:6261017-6261137 2.6e-05 80_[+3]_32 chr2L:18606750-18606870 2.6e-05 48_[+3]_64 chr2R:22420309-22420429 2.6e-05 61_[+3]_51 chr2R:5608520-5608640 2.6e-05 76_[+3]_36 chr3R:24661817-24661937 2.6e-05 45_[+3]_67 chr2L:248735-248855 2.6e-05 47_[+3]_65 chr2R:6161840-6161960 2.6e-05 39_[+3]_73 chr3L:12146119-12146239 5.2e-05 31_[+3]_81 chr2L:8302943-8303063 5.2e-05 92_[+3]_20 chr3R:16647503-16647623 5.2e-05 112_[+3] chrX:8906194-8906314 5.2e-05 94_[+3]_18 chr2L:15038856-15038976 5.2e-05 22_[+3]_90 chr3R:18450040-18450160 5.2e-05 14_[+3]_98 chr2R:16001246-16001366 7.8e-05 40_[+3]_72 chr2R:22420953-22421073 7.8e-05 53_[+3]_59 chr4:458232-458352 7.8e-05 11_[+3]_101 chrX:23007668-23007788 9.7e-05 64_[+3]_48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=24 chr3L:3937953-3938073 ( 58) TATCGATA 1 chr3L:15137317-15137437 ( 16) TATCGATA 1 chr3L:22871534-22871654 ( 30) TATCGATA 1 chrX:12763547-12763667 ( 97) TATCGATA 1 chr3R:14655730-14655850 ( 26) TATCGATA 1 chrX:16303782-16303902 ( 95) TATCGATA 1 chr2R:5760728-5760848 ( 94) TATCGATA 1 chrX:6261017-6261137 ( 81) TATCGATA 1 chr2L:18606750-18606870 ( 49) TATCGATA 1 chr2R:22420309-22420429 ( 62) TATCGATA 1 chr2R:5608520-5608640 ( 77) TATCGATA 1 chr3R:24661817-24661937 ( 46) TATCGATA 1 chr2L:248735-248855 ( 48) TATCGATA 1 chr2R:6161840-6161960 ( 40) TATCGATA 1 chr3L:12146119-12146239 ( 32) TATCGATT 1 chr2L:8302943-8303063 ( 93) TATCGATT 1 chr3R:16647503-16647623 ( 113) TATCGATT 1 chrX:8906194-8906314 ( 95) TATCGATT 1 chr2L:15038856-15038976 ( 23) TATCGATT 1 chr3R:18450040-18450160 ( 15) TATCGATT 1 chr2R:16001246-16001366 ( 41) TTTCGATA 1 chr2R:22420953-22421073 ( 54) TTTCGATA 1 chr4:458232-458352 ( 12) TTTCGATA 1 chrX:23007668-23007788 ( 65) CATCGATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6476 E= 2.8e-001 -1123 -233 -1123 173 159 -1123 -1123 -120 -1123 -1123 -1123 179 -1123 225 -1123 -1123 -1123 -1123 225 -1123 178 -1123 -1123 -1123 -1123 -1123 -1123 179 136 -1123 -1123 -21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 24 E= 2.8e-001 0.000000 0.041667 0.000000 0.958333 0.875000 0.000000 0.000000 0.125000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.750000 0.000000 0.000000 0.250000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 regular expression -------------------------------------------------------------------------------- TATCGAT[AT] -------------------------------------------------------------------------------- Time 20.08 secs. ******************************************************************************** ******************************************************************************** MOTIF AAATATTT MEME-4 width = 8 sites = 22 llr = 206 E-value = 1.3e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A aaa:a::: pos.-specific C :::::::3 probability G :::::::: matrix T :::a:aa7 bits 2.3 2.0 1.8 ******* 1.6 ******* Relative 1.4 ******* Entropy 1.1 ******** (13.5 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAATATTT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:8430600-8430720 1 4.93e-05 . AAATATTT GTTCGCCAAA chr3L:18905213-18905333 71 4.93e-05 GTGTCCAATA AAATATTT TACAGAAAGA chr3R:14655730-14655850 49 4.93e-05 GAAGAAAAAT AAATATTT ATTCACATGA chr3R:19154013-19154133 24 4.93e-05 ACAAACATCA AAATATTT TTCAAGTTTT chr3L:834088-834208 48 4.93e-05 AGCTAAAAAC AAATATTT CGTGATTTTT chr2L:5081703-5081823 101 4.93e-05 GAAAGCAAAC AAATATTT TTTACATAAA chr3R:14451077-14451197 35 4.93e-05 TTCGATTTGG AAATATTT GACTTTGATT chr3L:18905006-18905126 17 4.93e-05 ATCAGTTTAA AAATATTT AACAAAGATA chrX:6350359-6350479 87 4.93e-05 CGAAGTTGAA AAATATTT TCTAACGTGA chr2R:5608520-5608640 57 4.93e-05 AACGATAGAA AAATATTT TTATCCGAAA chrX:16791205-16791325 91 4.93e-05 AACGCATAAT AAATATTT AGACATTTTT chr3L:15987773-15987893 86 4.93e-05 TTAGTGCTCC AAATATTT CAAAAACTAT chr3L:18745745-18745865 5 4.93e-05 CTAA AAATATTT TCGAATGATA chrX:21503287-21503407 110 4.93e-05 AGAGTTCGGA AAATATTT AAG chr3L:5669788-5669908 104 4.93e-05 ATCACGAATT AAATATTT CGCAAATTT chr2R:16867692-16867812 111 8.53e-05 GTGTTAAATT AAATATTC AA chr3R:30496467-30496587 69 8.53e-05 ACAGGCCCGA AAATATTC AAATCCCCCA chr3R:7541090-7541210 75 8.53e-05 GATCACTGCG AAATATTC ACTGCTACTG chr3R:22613564-22613684 78 8.53e-05 ACGAAGTCGT AAATATTC GATTGCGAGA chr3R:12858228-12858348 100 8.53e-05 GACAGAAAAC AAATATTC AAACTCAGTG chrX:7776791-7776911 67 8.53e-05 ATGTTCTAGA AAATATTC CATATGAAGT chr3R:26956040-26956160 7 8.53e-05 GAAGTT AAATATTC CATTTATACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:8430600-8430720 4.9e-05 [+4]_112 chr3L:18905213-18905333 4.9e-05 70_[+4]_42 chr3R:14655730-14655850 4.9e-05 48_[+4]_64 chr3R:19154013-19154133 4.9e-05 23_[+4]_89 chr3L:834088-834208 4.9e-05 47_[+4]_65 chr2L:5081703-5081823 4.9e-05 100_[+4]_12 chr3R:14451077-14451197 4.9e-05 34_[+4]_78 chr3L:18905006-18905126 4.9e-05 16_[+4]_96 chrX:6350359-6350479 4.9e-05 86_[+4]_26 chr2R:5608520-5608640 4.9e-05 56_[+4]_56 chrX:16791205-16791325 4.9e-05 90_[+4]_22 chr3L:15987773-15987893 4.9e-05 85_[+4]_27 chr3L:18745745-18745865 4.9e-05 4_[+4]_108 chrX:21503287-21503407 4.9e-05 109_[+4]_3 chr3L:5669788-5669908 4.9e-05 103_[+4]_9 chr2R:16867692-16867812 8.5e-05 110_[+4]_2 chr3R:30496467-30496587 8.5e-05 68_[+4]_44 chr3R:7541090-7541210 8.5e-05 74_[+4]_38 chr3R:22613564-22613684 8.5e-05 77_[+4]_35 chr3R:12858228-12858348 8.5e-05 99_[+4]_13 chrX:7776791-7776911 8.5e-05 66_[+4]_46 chr3R:26956040-26956160 8.5e-05 6_[+4]_106 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAATATTT width=8 seqs=22 chr3R:8430600-8430720 ( 1) AAATATTT 1 chr3L:18905213-18905333 ( 71) AAATATTT 1 chr3R:14655730-14655850 ( 49) AAATATTT 1 chr3R:19154013-19154133 ( 24) AAATATTT 1 chr3L:834088-834208 ( 48) AAATATTT 1 chr2L:5081703-5081823 ( 101) AAATATTT 1 chr3R:14451077-14451197 ( 35) AAATATTT 1 chr3L:18905006-18905126 ( 17) AAATATTT 1 chrX:6350359-6350479 ( 87) AAATATTT 1 chr2R:5608520-5608640 ( 57) AAATATTT 1 chrX:16791205-16791325 ( 91) AAATATTT 1 chr3L:15987773-15987893 ( 86) AAATATTT 1 chr3L:18745745-18745865 ( 5) AAATATTT 1 chrX:21503287-21503407 ( 110) AAATATTT 1 chr3L:5669788-5669908 ( 104) AAATATTT 1 chr2R:16867692-16867812 ( 111) AAATATTC 1 chr3R:30496467-30496587 ( 69) AAATATTC 1 chr3R:7541090-7541210 ( 75) AAATATTC 1 chr3R:22613564-22613684 ( 78) AAATATTC 1 chr3R:12858228-12858348 ( 100) AAATATTC 1 chrX:7776791-7776911 ( 67) AAATATTC 1 chr3R:26956040-26956160 ( 7) AAATATTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6807 E= 1.3e+002 178 -1110 -1110 -1110 178 -1110 -1110 -1110 178 -1110 -1110 -1110 -1110 -1110 -1110 179 178 -1110 -1110 -1110 -1110 -1110 -1110 179 -1110 -1110 -1110 179 -1110 60 -1110 124 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 22 E= 1.3e+002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.318182 0.000000 0.681818 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATATTT MEME-4 regular expression -------------------------------------------------------------------------------- AAATATT[TC] -------------------------------------------------------------------------------- Time 26.09 secs. ******************************************************************************** ******************************************************************************** MOTIF HGTGATTT MEME-5 width = 8 sites = 31 llr = 279 E-value = 4.3e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A 4:::a::: pos.-specific C 4::::3:: probability G :a:a:::: matrix T 2:a::7aa bits 2.3 * * 2.0 * * 1.8 **** * 1.6 **** ** Relative 1.4 **** ** Entropy 1.1 ******* (13.0 bits) 0.9 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGTGATTT consensus A C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:1570252-1570372 59 1.87e-05 TTATCATTAA CGTGATTT TTATTCCCCT chr3L:834088-834208 56 1.87e-05 ACAAATATTT CGTGATTT TTGTAAATAT chrX:4671388-4671508 31 1.87e-05 ATTATAAAAG CGTGATTT CAAAAAGAAG chr2L:20860121-20860241 35 1.87e-05 TCCCTTTCGA CGTGATTT CTAGTCACTT chr3R:15473687-15473807 14 1.87e-05 gccagtaagc cGTGATTT AGGCATGTTT chr2L:18835-18955 68 1.87e-05 AACGCAATGT CGTGATTT TGTGGGCAGT chr3R:11459731-11459851 60 1.87e-05 AACTCAAAAC CGTGATTT TTTATGGCTG chr2R:13895412-13895532 25 1.87e-05 CATGCGTGAG CGTGATTT GATATGGCCG chr3L:7993210-7993330 81 4.47e-05 ATCGTGACAG AGTGATTT ATGCTGCTAC chr2R:11306870-11306990 64 4.47e-05 ATGGGAACCG AGTGATTT TGGAGCGTCG chr3R:26213115-26213235 85 4.47e-05 ATCACGGCCA AGTGATTT GGCATTACCT chrX:21503491-21503611 59 4.47e-05 CACTGTTTTA AGTGATTT CAAATGCCCC chr3R:5296713-5296833 8 4.47e-05 AGGGGCA AGTGATTT TCGGGTACTA chr2L:5148051-5148171 62 4.47e-05 CAATGATTTG AGTGATTT GTAGGCGAGT chrX:7776791-7776911 16 4.47e-05 AGTGATGAGA AGTGATTT TGTGCGTTGA chr2L:15613652-15613772 36 4.47e-05 TGAAATAAAA AGTGATTT TTCAGTTACT chrX:2187735-2187855 10 4.47e-05 GACAGTAAA AGTGATTT TCGGTCACTC chr3R:17002890-17003010 99 5.83e-05 AAGCTAGCGA CGTGACTT AAATCCCATT chr3R:16043072-16043192 86 5.83e-05 GTCATTTATA CGTGACTT ATTCTGTAGA chr3R:12858228-12858348 46 5.83e-05 ACACCAATTT CGTGACTT CACTGGCCAA chr2R:12899725-12899845 70 5.83e-05 AACTTGCAAC CGTGACTT TGTCCGGGAA chr3R:5213659-5213779 104 8.40e-05 GAATCATATT TGTGATTT TGGAATAAC chr3R:24931919-24932039 40 8.40e-05 TGCAGTAAAG TGTGATTT TCGCATCACT chrX:19276891-19277011 113 8.40e-05 ACAGTTTAAC TGTGATTT chr3R:22669317-22669437 54 8.40e-05 AGGTAGAATG TGTGATTT GAAGCGCTTT chrX:9550699-9550819 55 1.03e-04 ACCAGTGACC AGTGACTT GCGACTGTGA chr2L:15275010-15275130 78 1.03e-04 GCGTTCAACA AGTGACTT TTGTTATCAG chrX:11725686-11725806 91 1.22e-04 GCTGATATCG TGTGACTT TCTACTGAAG chr3R:15206508-15206628 91 1.22e-04 ATACAAATGT TGTGACTT GGATATGAGC chr2R:9540868-9540988 36 1.22e-04 TTTAGAACAG TGTGACTT CTCGATAGAT chr2L:9777219-9777339 32 1.35e-04 ATGCAGAAAA CGTGATTG CCTCAAAGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:1570252-1570372 1.9e-05 58_[+5]_54 chr3L:834088-834208 1.9e-05 55_[+5]_57 chrX:4671388-4671508 1.9e-05 30_[+5]_82 chr2L:20860121-20860241 1.9e-05 34_[+5]_78 chr3R:15473687-15473807 1.9e-05 13_[+5]_99 chr2L:18835-18955 1.9e-05 67_[+5]_45 chr3R:11459731-11459851 1.9e-05 59_[+5]_53 chr2R:13895412-13895532 1.9e-05 24_[+5]_88 chr3L:7993210-7993330 4.5e-05 80_[+5]_32 chr2R:11306870-11306990 4.5e-05 63_[+5]_49 chr3R:26213115-26213235 4.5e-05 84_[+5]_28 chrX:21503491-21503611 4.5e-05 58_[+5]_54 chr3R:5296713-5296833 4.5e-05 7_[+5]_105 chr2L:5148051-5148171 4.5e-05 61_[+5]_51 chrX:7776791-7776911 4.5e-05 15_[+5]_97 chr2L:15613652-15613772 4.5e-05 35_[+5]_77 chrX:2187735-2187855 4.5e-05 9_[+5]_103 chr3R:17002890-17003010 5.8e-05 98_[+5]_14 chr3R:16043072-16043192 5.8e-05 85_[+5]_27 chr3R:12858228-12858348 5.8e-05 45_[+5]_67 chr2R:12899725-12899845 5.8e-05 69_[+5]_43 chr3R:5213659-5213779 8.4e-05 103_[+5]_9 chr3R:24931919-24932039 8.4e-05 39_[+5]_73 chrX:19276891-19277011 8.4e-05 112_[+5] chr3R:22669317-22669437 8.4e-05 53_[+5]_59 chrX:9550699-9550819 0.0001 54_[+5]_58 chr2L:15275010-15275130 0.0001 77_[+5]_35 chrX:11725686-11725806 0.00012 90_[+5]_22 chr3R:15206508-15206628 0.00012 90_[+5]_22 chr2R:9540868-9540988 0.00012 35_[+5]_77 chr2L:9777219-9777339 0.00014 31_[+5]_81 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HGTGATTT width=8 seqs=31 chr3L:1570252-1570372 ( 59) CGTGATTT 1 chr3L:834088-834208 ( 56) CGTGATTT 1 chrX:4671388-4671508 ( 31) CGTGATTT 1 chr2L:20860121-20860241 ( 35) CGTGATTT 1 chr3R:15473687-15473807 ( 14) CGTGATTT 1 chr2L:18835-18955 ( 68) CGTGATTT 1 chr3R:11459731-11459851 ( 60) CGTGATTT 1 chr2R:13895412-13895532 ( 25) CGTGATTT 1 chr3L:7993210-7993330 ( 81) AGTGATTT 1 chr2R:11306870-11306990 ( 64) AGTGATTT 1 chr3R:26213115-26213235 ( 85) AGTGATTT 1 chrX:21503491-21503611 ( 59) AGTGATTT 1 chr3R:5296713-5296833 ( 8) AGTGATTT 1 chr2L:5148051-5148171 ( 62) AGTGATTT 1 chrX:7776791-7776911 ( 16) AGTGATTT 1 chr2L:15613652-15613772 ( 36) AGTGATTT 1 chrX:2187735-2187855 ( 10) AGTGATTT 1 chr3R:17002890-17003010 ( 99) CGTGACTT 1 chr3R:16043072-16043192 ( 86) CGTGACTT 1 chr3R:12858228-12858348 ( 46) CGTGACTT 1 chr2R:12899725-12899845 ( 70) CGTGACTT 1 chr3R:5213659-5213779 ( 104) TGTGATTT 1 chr3R:24931919-24932039 ( 40) TGTGATTT 1 chrX:19276891-19277011 ( 113) TGTGATTT 1 chr3R:22669317-22669437 ( 54) TGTGATTT 1 chrX:9550699-9550819 ( 55) AGTGACTT 1 chr2L:15275010-15275130 ( 78) AGTGACTT 1 chrX:11725686-11725806 ( 91) TGTGACTT 1 chr3R:15206508-15206628 ( 91) TGTGACTT 1 chr2R:9540868-9540988 ( 36) TGTGACTT 1 chr2L:9777219-9777339 ( 32) CGTGATTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.5371 E= 4.3e-002 28 100 -1160 -35 -1160 -1160 225 -1160 -1160 -1160 -1160 179 -1160 -1160 225 -1160 178 -1160 -1160 -1160 -1160 47 -1160 130 -1160 -1160 -1160 179 -1160 -1160 -270 175 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 31 E= 4.3e-002 0.354839 0.419355 0.000000 0.225806 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.290323 0.000000 0.709677 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.032258 0.967742 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGTGATTT MEME-5 regular expression -------------------------------------------------------------------------------- [CAT]GTGA[TC]TT -------------------------------------------------------------------------------- Time 32.05 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:7498347-7498467 7.73e-03 34_[+2(3.74e-05)]_1_[+1(8.55e-05)]_\ 69 chr3L:3952011-3952131 5.25e-01 120 chr3R:23377427-23377547 1.54e-04 44_[+1(4.16e-05)]_10_[+1(4.16e-05)]_\ 10_[+1(4.16e-05)]_4_[+1(4.16e-05)]_20 chr3R:17379019-17379139 1.84e-03 42_[+2(8.12e-05)]_15_[+1(4.16e-05)]_\ 47 chr2R:9540868-9540988 4.08e-03 120 chrX:9029522-9029642 1.25e-01 120 chrX:2187735-2187855 5.28e-04 9_[+5(4.47e-05)]_49_[+2(6.11e-05)]_\ 9_[+2(1.36e-05)]_29 chrX:22461357-22461477 1.54e-03 44_[+2(1.36e-05)]_13_[+1(1.39e-05)]_\ 47 chrX:1654916-1655036 6.09e-03 27_[+2(7.12e-05)]_4_[+2(3.74e-05)]_\ 22_[+2(7.12e-05)]_1_[+1(8.55e-05)]_34 chr2L:15613652-15613772 3.17e-03 35_[+5(4.47e-05)]_77 chr2R:17493648-17493768 5.47e-02 120 chr2R:6161840-6161960 2.03e-01 39_[+3(2.61e-05)]_73 chr3R:18450040-18450160 5.33e-04 14_[+3(5.19e-05)]_26_[+1(8.55e-05)]_\ 64 chr2L:18358171-18358291 1.30e-03 35_[+2(8.12e-05)]_1_[+1(4.16e-05)]_\ 16_[+1(4.16e-05)]_44 chr2R:9031935-9032055 9.15e-03 36_[+1(4.16e-05)]_2_[+1(8.55e-05)]_\ 66 chr3L:9183995-9184115 1.57e-03 35_[+1(4.16e-05)]_1_[+2(6.11e-05)]_\ 1_[+1(4.16e-05)]_22_[+1(4.16e-05)]_29 chrX:18945642-18945762 2.50e-03 45_[+1(1.39e-05)]_1_[+2(3.74e-05)]_\ 58 chrX:130694-130814 1.98e-01 120 chrX:1642211-1642331 1.15e-02 49_[+2(3.74e-05)]_4_[+2(3.74e-05)]_\ 51 chr2L:9777219-9777339 2.28e-04 64_[+2(4.74e-05)]_7_[+1(1.39e-05)]_\ 33 chr2R:22168058-22168178 1.65e-02 [+1(8.55e-05)]_112 chrX:14478665-14478785 8.31e-03 31_[+2(4.74e-05)]_81 chr2R:18957159-18957279 1.39e-02 32_[+2(3.74e-05)]_10_[+2(3.74e-05)]_\ 10_[+2(3.74e-05)]_8_[+2(3.74e-05)]_28 chr3L:2146026-2146146 1.34e-03 35_[+1(1.39e-05)]_77 chrX:12978146-12978266 1.64e-02 29_[+2(4.74e-05)]_2_[+1(6.54e-05)]_\ 22_[+2(4.74e-05)]_13_[+2(4.74e-05)]_22 chrX:1099819-1099939 2.72e-03 27_[+2(8.12e-05)]_85 chr3R:14334063-14334183 6.88e-05 28_[+2(1.36e-05)]_84 chr3R:26956040-26956160 1.87e-04 6_[+4(8.53e-05)]_37_[+1(1.39e-05)]_\ 61 chr2R:8013784-8013904 3.56e-02 120 chr3L:11135027-11135147 2.22e-03 47_[+2(1.36e-05)]_7_[+2(1.36e-05)]_\ 50 chrX:8177585-8177705 6.40e-03 120 chr3R:7094501-7094621 2.06e-03 40_[+2(8.12e-05)]_72 chr2L:8438155-8438275 2.03e-01 120 chr3R:6239120-6239240 2.48e-02 120 chr2R:13895412-13895532 3.44e-03 24_[+5(1.87e-05)]_88 chr2L:14351612-14351732 2.68e-02 83_[+1(1.39e-05)]_29 chr3R:9782676-9782796 4.74e-02 120 chr2L:2060733-2060853 2.26e-03 49_[+2(3.74e-05)]_1_[+1(4.16e-05)]_\ 7_[+2(3.74e-05)]_39 chr3R:15803585-15803705 1.23e-02 120 chrX:16927112-16927232 3.21e-03 10_[+2(2.36e-05)]_102 chr3L:11765355-11765475 7.82e-01 120 chr3L:11132176-11132296 1.69e-02 55_[+1(1.39e-05)]_57 chrX:5705236-5705356 9.50e-04 [+2(1.36e-05)]_112 chr3R:22669317-22669437 6.65e-02 53_[+5(8.40e-05)]_59 chr2L:12133459-12133579 4.40e-02 39_[+5(4.47e-05)]_73 chrX:7776791-7776911 9.78e-05 15_[+5(4.47e-05)]_43_[+4(8.53e-05)]_\ 46 chr2L:248735-248855 4.16e-02 47_[+3(2.61e-05)]_65 chr2L:12110466-12110586 6.78e-02 120 chr2L:15275010-15275130 8.42e-02 120 chr3L:5669788-5669908 1.36e-04 53_[+2(1.36e-05)]_4_[+2(3.74e-05)]_\ 30_[+4(4.93e-05)]_9 chr4:458232-458352 1.55e-02 11_[+3(7.77e-05)]_14_[+3(9.67e-05)]_\ 79 chrX:19276891-19277011 2.78e-03 76_[+1(4.16e-05)]_28_[+5(8.40e-05)] chr3R:11459731-11459851 2.41e-04 59_[+5(1.87e-05)]_13_[+1(8.55e-05)]_\ 32 chr3R:21658893-21659013 1.45e-02 58_[+1(4.16e-05)]_54 chr2R:5776451-5776571 4.15e-04 49_[+2(6.11e-05)]_1_[+1(8.55e-05)]_\ 13_[+2(6.11e-05)]_33 chr3R:15206508-15206628 1.13e-02 120 chr3L:11135237-11135357 6.22e-01 120 chr2R:14324682-14324802 2.10e-04 80_[+1(1.39e-05)]_32 chr2R:21786082-21786202 5.21e-04 67_[+1(4.16e-05)]_45 chrX:21503287-21503407 2.57e-03 109_[+4(4.93e-05)]_3 chr2R:17852250-17852370 9.60e-01 120 chr3R:24927060-24927180 1.74e-01 120 chr3L:20673580-20673700 1.08e-02 6_[+1(8.55e-05)]_106 chr2R:12899725-12899845 3.06e-04 69_[+5(5.83e-05)]_9_[+1(1.39e-05)]_\ 26 chr3R:6593201-6593321 1.45e-02 48_[+2(3.74e-05)]_64 chrX:18320879-18320999 1.68e-02 14_[+1(1.39e-05)]_98 chr3R:5287443-5287563 1.41e-03 57_[+2(8.12e-05)]_13_[+1(4.16e-05)]_\ 34 chrX:18094319-18094439 5.81e-03 120 chr3R:27238121-27238241 9.22e-02 120 chr2L:21706-21826 5.55e-02 22_[+5(8.40e-05)]_90 chr3L:10451848-10451968 1.93e-04 19_[+1(1.39e-05)]_93 chr2L:5148051-5148171 1.89e-02 61_[+5(4.47e-05)]_51 chr3R:12858228-12858348 5.66e-04 45_[+5(5.83e-05)]_46_[+4(8.53e-05)]_\ 13 chr3R:30425780-30425900 2.74e-01 120 chr3L:4252951-4253071 3.09e-03 120 chr2L:20681438-20681558 9.46e-03 120 chrX:11472501-11472621 7.15e-04 61_[+5(4.47e-05)]_51 chr3R:26958288-26958408 7.70e-02 120 chr3R:24931919-24932039 1.36e-03 24_[+2(8.12e-05)]_7_[+5(8.40e-05)]_\ 44_[+1(9.54e-05)]_21 chr3R:21584403-21584523 1.39e-02 23_[+5(5.83e-05)]_89 chrX:4319403-4319523 9.41e-02 10_[+3(9.67e-05)]_17_[+3(9.67e-05)]_\ 77 chr3R:20635335-20635455 7.17e-02 120 chr2R:18194640-18194760 1.84e-03 72_[+2(8.12e-05)]_40 chr3R:22613564-22613684 8.58e-03 77_[+4(8.53e-05)]_35 chr3L:18745745-18745865 1.15e-02 4_[+4(4.93e-05)]_108 chr3L:7094773-7094893 6.57e-02 120 chrX:5705440-5705560 1.90e-02 53_[+2(9.13e-05)]_59 chr3R:5296713-5296833 2.40e-02 7_[+5(4.47e-05)]_21_[+5(8.40e-05)]_\ 76 chr2L:18835-18955 3.79e-02 67_[+5(1.87e-05)]_45 chr2L:10648134-10648254 2.00e-02 1_[+2(3.74e-05)]_37_[+2(3.74e-05)]_\ 34_[+1(8.55e-05)]_24 chr2R:12565780-12565900 1.18e-03 84_[+5(4.47e-05)]_28 chr2L:21071590-21071710 1.83e-01 120 chr3L:1748364-1748484 4.14e-02 120 chr3R:11128238-11128358 1.86e-01 120 chr2L:10646848-10646968 1.65e-02 6_[+2(3.74e-05)]_22_[+2(9.13e-05)]_\ 1_[+1(4.16e-05)]_7_[+2(9.13e-05)]_4_[+2(9.13e-05)]_4_[+2(9.13e-05)]_28 chr3L:15987773-15987893 9.67e-03 85_[+4(4.93e-05)]_27 chrX:21503491-21503611 1.83e-04 46_[+2(1.36e-05)]_4_[+5(4.47e-05)]_\ 54 chr2L:7447957-7448077 4.65e-01 120 chr3L:4187770-4187890 8.22e-03 40_[+2(3.74e-05)]_72 chr2L:18323095-18323215 1.17e-04 40_[+1(1.39e-05)]_11_[+1(4.16e-05)]_\ 53 chr2L:12435797-12435917 8.49e-01 120 chr2R:14875801-14875921 1.07e-02 94_[+2(2.36e-05)]_18 chr2R:24031220-24031340 1.01e-01 120 chrX:15574516-15574636 7.89e-03 120 chr3R:31842480-31842600 5.72e-02 120 chr3L:3142716-3142836 2.29e-01 120 chr3L:12928868-12928988 3.45e-03 120 chr2L:15038856-15038976 5.07e-06 22_[+3(5.19e-05)]_57_[+1(4.16e-05)]_\ 25 chr2L:1398179-1398299 9.17e-02 120 chrX:9909409-9909529 3.91e-01 120 chr2L:4596252-4596372 4.06e-03 76_[+2(3.74e-05)]_36 chrX:17821625-17821745 5.50e-03 26_[+2(1.36e-05)]_4_[+2(1.36e-05)]_\ 74 chr3R:4717697-4717817 2.43e-01 120 chr3R:24661817-24661937 7.89e-02 45_[+3(2.61e-05)]_67 chr3L:8688795-8688915 2.19e-02 45_[+2(3.74e-05)]_23_[+2(3.74e-05)]_\ 36 chr3L:9777098-9777218 1.57e-03 43_[+1(4.16e-05)]_1_[+2(6.11e-05)]_\ 60 chr2L:21220585-21220705 7.41e-01 120 chr3R:7093728-7093848 5.71e-03 120 chr3R:31726432-31726552 9.96e-03 30_[+5(5.83e-05)]_82 chr3L:15696428-15696548 5.55e-01 120 chr3R:21072075-21072195 5.58e-03 12_[+1(4.16e-05)]_100 chr2R:14886973-14887093 3.52e-02 120 chrX:16791205-16791325 3.40e-02 90_[+4(4.93e-05)]_22 chr3R:17646147-17646267 3.90e-02 58_[+2(4.74e-05)]_54 chr2R:5608520-5608640 5.58e-03 56_[+4(4.93e-05)]_12_[+3(2.61e-05)]_\ 36 chr3R:11669788-11669908 3.01e-03 66_[+1(6.54e-05)]_46 chr2L:21676571-21676691 4.57e-01 120 chr2L:8123881-8124001 1.42e-01 120 chrX:17372326-17372446 1.75e-03 10_[+2(3.74e-05)]_40_[+2(1.36e-05)]_\ 54 chrX:15732055-15732175 1.01e-02 87_[+3(5.19e-05)]_25 chr2R:22420309-22420429 5.83e-03 61_[+3(2.61e-05)]_51 chr3L:3169236-3169356 2.65e-01 120 chr2L:15039081-15039201 8.39e-01 120 chrX:8906194-8906314 1.01e-02 94_[+3(5.19e-05)]_18 chr3L:3668920-3669040 8.48e-04 36_[+2(1.36e-05)]_7_[+1(8.55e-05)]_\ 61 chrX:9550699-9550819 8.80e-04 28_[+2(6.11e-05)]_2_[+1(4.16e-05)]_\ 74 chr3L:11765564-11765684 4.11e-01 120 chr3R:29313215-29313335 4.77e-01 120 chr2L:3426976-3427096 1.12e-01 120 chr3R:15473687-15473807 8.59e-03 13_[+5(1.87e-05)]_99 chr3L:4252639-4252759 1.61e-02 120 chr3R:11500002-11500122 8.04e-02 120 chrX:15737099-15737219 2.16e-01 120 chr3L:16113105-16113225 4.92e-01 120 chr3L:7519487-7519607 3.93e-02 57_[+5(1.87e-05)]_55 chr3R:7541090-7541210 5.30e-02 74_[+4(8.53e-05)]_38 chrX:8896930-8897050 6.59e-02 120 chrX:16792012-16792132 3.33e-02 120 chrX:17656772-17656892 2.73e-01 120 chr3R:12628713-12628833 6.25e-02 120 chr3R:14655954-14656074 7.16e-01 120 chr3R:23758518-23758638 1.45e-01 55_[+2(7.12e-05)]_57 chrX:6350359-6350479 1.20e-02 86_[+4(4.93e-05)]_26 chr3L:3376677-3376797 3.81e-02 120 chr2L:17381756-17381876 5.99e-02 68_[+2(7.12e-05)]_44 chr3R:30496467-30496587 1.08e-02 68_[+4(8.53e-05)]_44 chrX:6350559-6350679 6.37e-01 120 chr3R:11483431-11483551 1.18e-02 120 chr2R:19415069-19415189 3.97e-01 120 chrX:11725686-11725806 6.90e-02 120 chr2L:18606750-18606870 3.27e-05 20_[+2(1.36e-05)]_20_[+3(2.61e-05)]_\ 64 chr2L:20860121-20860241 9.81e-03 34_[+5(1.87e-05)]_78 chr3L:21023885-21024005 2.67e-02 69_[+1(8.55e-05)]_43 chr3L:18905006-18905126 4.09e-02 16_[+4(4.93e-05)]_96 chr3R:26213115-26213235 1.46e-02 84_[+5(4.47e-05)]_28 chrX:4671388-4671508 1.77e-02 30_[+5(1.87e-05)]_82 chrX:19579503-19579623 2.24e-01 120 chrX:21369579-21369699 9.14e-03 86_[+1(1.39e-05)]_26 chr3R:14451077-14451197 4.30e-04 34_[+4(4.93e-05)]_13_[+2(3.74e-05)]_\ 57 chrX:123966-124086 1.34e-01 120 chr2R:24195716-24195836 3.97e-04 101_[+2(1.36e-05)]_11 chr3R:23787057-23787177 1.57e-03 56_[+2(6.11e-05)]_56 chrX:8116897-8117017 3.63e-01 120 chr2R:16867692-16867812 2.00e-02 110_[+4(8.53e-05)]_2 chr2L:15609261-15609381 9.43e-01 120 chr3L:3398652-3398772 1.18e-01 120 chr3L:13860182-13860302 6.85e-01 120 chrX:16320665-16320785 1.63e-01 120 chrX:6261017-6261137 2.51e-01 38_[+3(9.67e-05)]_34_[+3(2.61e-05)]_\ 32 chrX:15710914-15711034 1.44e-02 120 chr2L:18444597-18444717 4.35e-01 120 chr2R:19464216-19464336 1.81e-03 38_[+1(4.16e-05)]_74 chr3R:16043072-16043192 5.40e-02 85_[+5(5.83e-05)]_27 chr2L:10396543-10396663 1.66e-01 120 chr2L:5081703-5081823 2.84e-02 100_[+4(4.93e-05)]_12 chr3L:834088-834208 4.01e-04 47_[+4(4.93e-05)]_[+5(1.87e-05)]_57 chr2R:22420953-22421073 4.86e-02 53_[+3(7.77e-05)]_59 chrX:19695187-19695307 2.17e-02 120 chr2R:5760728-5760848 2.13e-02 93_[+3(2.61e-05)]_19 chr3L:21274392-21274512 1.39e-01 120 chrX:10387088-10387208 8.75e-01 120 chrX:16499506-16499626 1.98e-03 31_[+1(1.39e-05)]_4_[+1(1.39e-05)]_\ 29_[+1(6.54e-05)]_6_[+1(1.39e-05)]_18 chr3R:26966325-26966445 5.58e-01 120 chr3R:19154013-19154133 4.57e-02 23_[+4(4.93e-05)]_89 chrX:17078733-17078853 3.80e-02 18_[+3(9.67e-05)]_49_[+3(9.67e-05)]_\ 37 chr2R:11306870-11306990 7.33e-03 63_[+5(4.47e-05)]_49 chr3L:1570252-1570372 2.93e-02 58_[+5(1.87e-05)]_54 chr3R:22724230-22724350 1.21e-03 1_[+2(3.74e-05)]_39_[+1(6.54e-05)]_\ 64 chrX:19667541-19667661 1.07e-01 120 chrX:16303782-16303902 6.03e-02 94_[+3(2.61e-05)]_18 chr3R:16647503-16647623 6.78e-03 68_[+3(9.67e-05)]_36_[+3(5.19e-05)] chr3R:14655730-14655850 6.24e-03 25_[+3(2.61e-05)]_15_[+4(4.93e-05)]_\ 64 chr3L:8185402-8185522 1.74e-01 120 chr2L:8302943-8303063 1.95e-04 64_[+1(1.39e-05)]_6_[+1(4.16e-05)]_\ 6_[+3(5.19e-05)]_20 chr3R:9512458-9512578 8.37e-04 77_[+2(1.36e-05)]_35 chr4:1198752-1198872 2.19e-01 120 chr3R:24054391-24054511 3.07e-02 43_[+5(8.40e-05)]_69 chr3L:20487270-20487390 5.87e-02 120 chr2R:11691159-11691279 9.12e-03 59_[+2(3.74e-05)]_53 chr3L:12791747-12791867 1.13e-01 120 chr2R:16001246-16001366 4.80e-02 40_[+3(7.77e-05)]_72 chr2R:15708170-15708290 3.21e-04 16_[+1(4.16e-05)]_19_[+2(1.36e-05)]_\ 4_[+2(1.36e-05)]_57 chr2L:2493206-2493326 7.07e-01 120 chr2R:21181168-21181288 3.55e-01 120 chr3L:21823397-21823517 5.87e-02 120 chr3R:14626226-14626346 1.97e-01 94_[+1(9.54e-05)]_18 chrX:13492290-13492410 7.04e-04 36_[+1(4.16e-05)]_7_[+2(3.74e-05)]_\ 4_[+2(1.36e-05)]_7_[+1(4.16e-05)]_34 chr2L:8305520-8305640 4.50e-01 120 chr3R:5268732-5268852 2.26e-01 120 chr3L:12146119-12146239 9.84e-02 31_[+3(5.19e-05)]_81 chr3R:13833659-13833779 3.35e-01 120 chr4:393279-393399 2.11e-04 14_[+1(1.39e-05)]_98 chr3L:18905213-18905333 7.27e-02 70_[+4(4.93e-05)]_42 chrX:12763547-12763667 1.07e-01 96_[+3(2.61e-05)]_16 chr3R:31405928-31406048 4.54e-01 120 chr2R:19129243-19129363 3.79e-01 120 chr3R:17002890-17003010 5.37e-02 98_[+5(5.83e-05)]_14 chrX:16836082-16836202 3.57e-02 120 chrX:23007668-23007788 4.16e-03 64_[+3(9.67e-05)]_36_[+5(8.40e-05)]_\ 4 chrX:19696956-19697076 2.57e-03 36_[+1(1.39e-05)]_76 chr3R:8430600-8430720 6.54e-04 [+4(4.93e-05)]_87_[+1(8.55e-05)]_17 chr3L:2166870-2166990 8.05e-01 120 chrX:2112740-2112860 8.04e-02 120 chr3L:22871534-22871654 7.13e-03 29_[+3(2.61e-05)]_83 chr2R:7132472-7132592 1.19e-01 120 chr3R:27185878-27185998 1.68e-02 28_[+2(3.74e-05)]_84 chr2R:24057193-24057313 6.56e-01 120 chr3L:16587109-16587229 1.27e-01 120 chr2R:10125688-10125808 2.98e-02 36_[+1(8.55e-05)]_76 chr2R:23753305-23753425 2.66e-02 120 chr3L:20394799-20394919 3.88e-03 72_[+2(1.36e-05)]_40 chr3R:25049556-25049676 1.20e-01 120 chr3L:15137317-15137437 5.52e-02 15_[+3(2.61e-05)]_97 chr3L:7338893-7339013 5.37e-02 120 chr3R:18585302-18585422 3.61e-03 56_[+2(3.74e-05)]_56 chr3L:7993210-7993330 8.98e-04 80_[+5(4.47e-05)]_32 chr3L:20541673-20541793 6.48e-01 120 chr3R:5213659-5213779 1.43e-03 76_[+2(3.74e-05)]_19_[+5(8.40e-05)]_\ 9 chrX:16441745-16441865 5.71e-02 46_[+1(1.39e-05)]_66 chr3L:3937953-3938073 4.46e-02 57_[+3(2.61e-05)]_17_[+3(2.61e-05)]_\ 30 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c23n03.farnam.hpc.yale.internal ********************************************************************************