******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG17186.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:22473610-22473730 1.0000 120 chr2L:11004430-11004550 1.0000 120 chr2R:15571369-15571489 1.0000 120 chrX:2738757-2738877 1.0000 120 chr3R:18572977-18573097 1.0000 120 chrX:7074475-7074595 1.0000 120 chr3R:8806221-8806341 1.0000 120 chrX:3175069-3175189 1.0000 120 chr3R:23996323-23996443 1.0000 120 chrX:4938071-4938191 1.0000 120 chr2L:3171075-3171195 1.0000 120 chrX:22472012-22472132 1.0000 120 chr2L:5271264-5271384 1.0000 120 chr2L:4386015-4386135 1.0000 120 chr3L:18820704-18820824 1.0000 120 chr2L:3530359-3530479 1.0000 120 chr2L:3530570-3530690 1.0000 120 chrX:9192577-9192697 1.0000 120 chr2R:21720365-21720485 1.0000 120 chrX:3880636-3880756 1.0000 120 chrX:17886272-17886392 1.0000 120 chr2R:20262822-20262942 1.0000 120 chr2R:15682669-15682789 1.0000 120 chr3R:8805564-8805684 1.0000 120 chr2L:3171283-3171403 1.0000 120 chr2R:21025018-21025138 1.0000 120 chr2R:13846273-13846393 1.0000 120 chrX:13811577-13811697 1.0000 120 chr3R:29202573-29202693 1.0000 120 chr2R:15680075-15680195 1.0000 120 chr3R:23924303-23924423 1.0000 120 chr3R:17719361-17719481 1.0000 120 chr3R:5821363-5821483 1.0000 120 chr3R:21359748-21359868 1.0000 120 chrX:18137074-18137194 1.0000 120 chr3R:8807132-8807252 1.0000 120 chr2R:21292163-21292283 1.0000 120 chr3R:21359951-21360071 1.0000 120 chrX:17852632-17852752 1.0000 120 chr2L:11004765-11004885 1.0000 120 chr2L:12097784-12097904 1.0000 120 chr2L:4382666-4382786 1.0000 120 chrX:8273334-8273454 1.0000 120 chr2R:15568852-15568972 1.0000 120 chr3R:7530365-7530485 1.0000 120 chr2L:1732296-1732416 1.0000 120 chr2R:8170206-8170326 1.0000 120 chr3L:17051179-17051299 1.0000 120 chr2R:22415740-22415860 1.0000 120 chrX:15760720-15760840 1.0000 120 chrX:1900582-1900702 1.0000 120 chr3R:24805233-24805353 1.0000 120 chr2R:18128370-18128490 1.0000 120 chrX:496411-496531 1.0000 120 chr3L:21335106-21335226 1.0000 120 chrX:16325569-16325689 1.0000 120 chrX:18647532-18647652 1.0000 120 chr2L:18943932-18944052 1.0000 120 chr3L:9358894-9359014 1.0000 120 chr2L:5096336-5096456 1.0000 120 chrX:8243299-8243419 1.0000 120 chr3L:13412716-13412836 1.0000 120 chr2L:19498150-19498270 1.0000 120 chr3L:1318346-1318466 1.0000 120 chrX:12903478-12903598 1.0000 120 chr3L:1756257-1756377 1.0000 120 chr3L:1777392-1777512 1.0000 120 chrX:10899387-10899507 1.0000 120 chr2L:10056811-10056931 1.0000 120 chr3R:27283706-27283826 1.0000 120 chr2L:21677623-21677743 1.0000 120 chr3L:22773439-22773559 1.0000 120 chr2L:4818193-4818313 1.0000 120 chr2R:22492126-22492246 1.0000 120 chr3R:23927609-23927729 1.0000 120 chr2R:23553975-23554095 1.0000 120 chr3R:7530574-7530694 1.0000 120 chr2L:2979219-2979339 1.0000 120 chrX:2727623-2727743 1.0000 120 chr2R:16240690-16240810 1.0000 120 chrX:15762866-15762986 1.0000 120 chrX:940800-940920 1.0000 120 chrX:7066787-7066907 1.0000 120 chr2L:4387102-4387222 1.0000 120 chr2L:3172751-3172871 1.0000 120 chr3L:9836756-9836876 1.0000 120 chrX:15328266-15328386 1.0000 120 chr3L:20393485-20393605 1.0000 120 chr3L:4103483-4103603 1.0000 120 chr3R:13958724-13958844 1.0000 120 chrX:18380015-18380135 1.0000 120 chrX:15475385-15475505 1.0000 120 chr3L:8634035-8634155 1.0000 120 chrX:10595880-10596000 1.0000 120 chr2R:12514736-12514856 1.0000 120 chr3L:16587027-16587147 1.0000 120 chr2R:23355107-23355227 1.0000 120 chr3L:5565138-5565258 1.0000 120 chr3R:14890166-14890286 1.0000 120 chr2R:7635494-7635614 1.0000 120 chr2R:14618088-14618208 1.0000 120 chr3R:5464654-5464774 1.0000 120 chr2R:10821575-10821695 1.0000 120 chr3R:12995612-12995732 1.0000 120 chr2R:23693903-23694023 1.0000 120 chr3R:29138586-29138706 1.0000 120 chrX:6824251-6824371 1.0000 120 chr3L:12794655-12794775 1.0000 120 chr3R:14259959-14260079 1.0000 120 chr3R:5374941-5375061 1.0000 120 chr2L:8449515-8449635 1.0000 120 chr3L:13502600-13502720 1.0000 120 chr3L:20006341-20006461 1.0000 120 chrX:11868954-11869074 1.0000 120 chrX:15701164-15701284 1.0000 120 chr3R:15206395-15206515 1.0000 120 chr3L:15816373-15816493 1.0000 120 chrX:2180997-2181117 1.0000 120 chrX:12897302-12897422 1.0000 120 chrX:15760966-15761086 1.0000 120 chr3R:5463328-5463448 1.0000 120 chrX:3723030-3723150 1.0000 120 chrX:3862683-3862803 1.0000 120 chr2R:18614975-18615095 1.0000 120 chr2R:14503849-14503969 1.0000 120 chr2L:544656-544776 1.0000 120 chr3R:15320686-15320806 1.0000 120 chr2R:16001612-16001732 1.0000 120 chr3R:19229367-19229487 1.0000 120 chrX:15996964-15997084 1.0000 120 chrX:9162097-9162217 1.0000 120 chr2R:24402344-24402464 1.0000 120 chr3L:6550596-6550716 1.0000 120 chr2R:8106297-8106417 1.0000 120 chrX:20162730-20162850 1.0000 120 chr2R:6715979-6716099 1.0000 120 chr3L:3937974-3938094 1.0000 120 chr3L:21343676-21343796 1.0000 120 chr3R:5516688-5516808 1.0000 120 chr3R:24530523-24530643 1.0000 120 chr2L:6919265-6919385 1.0000 120 chr2R:16017033-16017153 1.0000 120 chr3R:18200125-18200245 1.0000 120 chrX:19193425-19193545 1.0000 120 chr3R:27954025-27954145 1.0000 120 chr2L:19580310-19580430 1.0000 120 chr2R:10429610-10429730 1.0000 120 chr2R:6636008-6636128 1.0000 120 chr2L:9893356-9893476 1.0000 120 chr3L:8449331-8449451 1.0000 120 chr3L:9359096-9359216 1.0000 120 chr3L:7243912-7244032 1.0000 120 chr3R:15268586-15268706 1.0000 120 chr3R:20552237-20552357 1.0000 120 chr3R:15328196-15328316 1.0000 120 chr3L:16595261-16595381 1.0000 120 chr3R:24130215-24130335 1.0000 120 chr3R:25851307-25851427 1.0000 120 chr3L:20361532-20361652 1.0000 120 chr2L:6677559-6677679 1.0000 120 chrX:2249889-2250009 1.0000 120 chr2R:6214097-6214217 1.0000 120 chrX:1695888-1696008 1.0000 120 chrX:17886472-17886592 1.0000 120 chr2L:8686055-8686175 1.0000 120 chr2R:12145653-12145773 1.0000 120 chrX:19623070-19623190 1.0000 120 chr2L:8740768-8740888 1.0000 120 chr2L:11178972-11179092 1.0000 120 chrX:2603966-2604086 1.0000 120 chr2R:13168366-13168486 1.0000 120 chrX:18830495-18830615 1.0000 120 chr3R:25678821-25678941 1.0000 120 chr3R:25476904-25477024 1.0000 120 chrX:21605224-21605344 1.0000 120 chrX:3173178-3173298 1.0000 120 chr2L:6717515-6717635 1.0000 120 chr3L:20436153-20436273 1.0000 120 chrX:18385231-18385351 1.0000 120 chr3R:5550608-5550728 1.0000 120 chr3R:20621872-20621992 1.0000 120 chr3R:24585163-24585283 1.0000 120 chrX:5622558-5622678 1.0000 120 chr2R:6807564-6807684 1.0000 120 chrX:20251172-20251292 1.0000 120 chr3L:13389995-13390115 1.0000 120 chr3R:30046706-30046826 1.0000 120 chr2L:2580135-2580255 1.0000 120 chr2L:1728649-1728769 1.0000 120 chr3L:21626203-21626323 1.0000 120 chr2R:24574450-24574570 1.0000 120 chrX:3965251-3965371 1.0000 120 chr3R:20816164-20816284 1.0000 120 chr3R:16614429-16614549 1.0000 120 chrX:13612065-13612185 1.0000 120 chrX:9103784-9103904 1.0000 120 chr2R:20278879-20278999 1.0000 120 chrX:18499883-18500003 1.0000 120 chr3L:3472125-3472245 1.0000 120 chr3R:22745515-22745635 1.0000 120 chr2R:11452532-11452652 1.0000 120 chr2L:4463494-4463614 1.0000 120 chr3L:20816038-20816158 1.0000 120 chrX:941009-941129 1.0000 120 chr2R:18613047-18613167 1.0000 120 chrX:11124806-11124926 1.0000 120 chr3R:20634676-20634796 1.0000 120 chr3R:5219548-5219668 1.0000 120 chr3R:15485979-15486099 1.0000 120 chr2R:11150056-11150176 1.0000 120 chr2R:23953946-23954066 1.0000 120 chr3R:26966884-26967004 1.0000 120 chr2R:23865345-23865465 1.0000 120 chr2L:16738352-16738472 1.0000 120 chr2R:10886714-10886834 1.0000 120 chr2L:10769938-10770058 1.0000 120 chrX:15320182-15320302 1.0000 120 chr2R:23357387-23357507 1.0000 120 chrX:11891942-11892062 1.0000 120 chrX:9089379-9089499 1.0000 120 chr3R:12401814-12401934 1.0000 120 chr2R:15573824-15573944 1.0000 120 chr2R:8952312-8952432 1.0000 120 chr2L:20927779-20927899 1.0000 120 chr2R:9143893-9144013 1.0000 120 chr2L:114574-114694 1.0000 120 chrX:620266-620386 1.0000 120 chr3L:1329889-1330009 1.0000 120 chr3R:13088526-13088646 1.0000 120 chrX:1342067-1342187 1.0000 120 chr2L:3144853-3144973 1.0000 120 chr2R:13485555-13485675 1.0000 120 chrX:18515306-18515426 1.0000 120 chr4:835886-836006 1.0000 120 chr3R:12356257-12356377 1.0000 120 chrX:15697356-15697476 1.0000 120 chrX:6759482-6759602 1.0000 120 chrX:11137025-11137145 1.0000 120 chr3R:9679897-9680017 1.0000 120 chr2L:9912729-9912849 1.0000 120 chr2R:21168845-21168965 1.0000 120 chr2L:3023156-3023276 1.0000 120 chrX:16637338-16637458 1.0000 120 chrX:19616085-19616205 1.0000 120 chr2R:16221753-16221873 1.0000 120 chr2R:6746309-6746429 1.0000 120 chrX:4100988-4101108 1.0000 120 chr2R:22924719-22924839 1.0000 120 chr3L:14942912-14943032 1.0000 120 chrX:19201753-19201873 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG17186/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG17186.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.288 C 0.217 G 0.214 T 0.281 Background letter frequencies (from file dataset with add-one prior applied): A 0.288 C 0.217 G 0.214 T 0.281 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-1 width = 8 sites = 104 llr = 864 E-value = 2.4e-068 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 29:::a18 pos.-specific C 1::a:::: probability G ::::a::: matrix T 719:::92 bits 2.2 ** 2.0 ** 1.8 ** 1.6 **** Relative 1.3 ****** Entropy 1.1 ****** (12.0 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:4100988-4101108 60 2.46e-05 CGCTTCGTGT TATCGATA ACACGTAGTT chrX:19616085-19616205 100 2.46e-05 TGTTGCGTGC TATCGATA GACGGTGGAA chrX:6759482-6759602 45 2.46e-05 ACTTTAGAAT TATCGATA GTCCGTTGTG chr3R:12356257-12356377 56 2.46e-05 GTCGGCAAAC TATCGATA GTTAGATATT chrX:1342067-1342187 11 2.46e-05 GCGATGATTG TATCGATA GTATCGAGTG chr2L:114574-114694 29 2.46e-05 GCAATCGATA TATCGATA TGTCACAATC chrX:9089379-9089499 112 2.46e-05 AGCCGCGCGT TATCGATA A chr2R:23865345-23865465 46 2.46e-05 AATCCAGCGC TATCGATA ACATTCGGCC chr3R:20634676-20634796 88 2.46e-05 CGCTGGTTAA TATCGATA GTGTTTCATT chr2R:18613047-18613167 17 2.46e-05 GCTTGGCACT TATCGATA ACCTATTTCA chr3L:20816038-20816158 31 2.46e-05 CAAAAGATGT TATCGATA AGCAGTGTTG chr3R:20816164-20816284 47 2.46e-05 CATCAGTTTT TATCGATA GCCGCGGTGG chr3L:21626203-21626323 3 2.46e-05 CT TATCGATA AATATTACTT chr2L:6717515-6717635 90 2.46e-05 AGTGTGAAAA TATCGATA TCATCGAAAT chr3R:25476904-25477024 22 2.46e-05 CGATTAAGGC TATCGATA TATAGCGCTT chrX:18830495-18830615 107 2.46e-05 CGCCTTCCGA TATCGATA GTCAGC chr2R:12145653-12145773 8 2.46e-05 CAGCACC TATCGATA TACAGATAAC chrX:1695888-1696008 74 2.46e-05 TGTCGGTAGT TATCGATA ATGCATTCGC chrX:2249889-2250009 97 2.46e-05 GATAGTTCGC TATCGATA ATCGCTTTTT chr3L:20361532-20361652 79 2.46e-05 TGTCAGTTGT TATCGATA GTTTTCTGCT chr2L:9893356-9893476 73 2.46e-05 TTTTCCATGT TATCGATA TCGAAAGTGA chr2R:10429610-10429730 78 2.46e-05 TCGGAATAGA TATCGATA TCATCGAATG chrX:19193425-19193545 44 2.46e-05 CTATCGAGGC TATCGATA GCAGGCTAGC chr3L:3937974-3938094 37 2.46e-05 AATAAATACT TATCGATA TTGTTCGGCA chr2R:6715979-6716099 102 2.46e-05 GATATGAAGT TATCGATA GTGCCCGCGC chr2R:8106297-8106417 63 2.46e-05 CAGCACTGCC TATCGATA TTGGTGTGAA chrX:3723030-3723150 41 2.46e-05 CATAACGAGA TATCGATA ACAGCGGGAA chr3L:15816373-15816493 59 2.46e-05 CGATAGAGCC TATCGATA CTCGGAAGTT chr3R:15206395-15206515 102 2.46e-05 GCAGCTTGGA TATCGATA TCCGATGATT chr3L:12794655-12794775 46 2.46e-05 GTTATCGCTC TATCGATA GTTGGCGCAA chr2R:23693903-23694023 32 2.46e-05 ACCGCCCCGT TATCGATA TCAGCTGCAA chr3R:12995612-12995732 15 2.46e-05 CGATAAGAGG TATCGATA TACAAAGCTG chr2R:10821575-10821695 38 2.46e-05 TGCTGCATTA TATCGATA TGTTTAAAAA chr3L:5565138-5565258 103 2.46e-05 CACATAGGCT TATCGATA GGGCCCGATA chrX:15475385-15475505 79 2.46e-05 GTTAGTCAGG TATCGATA AGTTCGGTTA chrX:15328266-15328386 24 2.46e-05 GGCGAAGTGA TATCGATA ACACGCGCGG chrX:15762866-15762986 67 2.46e-05 TGCCATCGTA TATCGATA CATCCTCGAT chr2R:22492126-22492246 32 2.46e-05 ACAGCCACCC TATCGATA TATCGACTAT chrX:8243299-8243419 40 2.46e-05 ATCCGCGAGT TATCGATA CACTTGCGCA chr2L:18943932-18944052 66 2.46e-05 GAAGCTAAAC TATCGATA CGAGCGCGCA chrX:8273334-8273454 106 2.46e-05 TATCGGTTAC TATCGATA CATAGAA chr2L:4382666-4382786 106 2.46e-05 ATCGAGCGCT TATCGATA TCAAACG chrX:17852632-17852752 83 2.46e-05 AAGCGATAAG TATCGATA GATTCTAAAA chr3R:29202573-29202693 61 2.46e-05 CTGGAAAACC TATCGATA AATAAAAAGC chr2R:20262822-20262942 81 2.46e-05 CGACTGAATC TATCGATA GCAGCCAGCG chr2L:4386015-4386135 106 2.46e-05 GATAAGCGCA TATCGATA AAGAAAT chr3L:14942912-14943032 23 7.39e-05 ACTCCTCGCC TATCGATT ATTTTTGGAG chr2R:6746309-6746429 34 7.39e-05 GCTCTTCGTT AATCGATA GTTGGCTCAA chr2R:16221753-16221873 58 7.39e-05 GTCGCCTGGC TATCGATT TGACCCAGGG chr2L:3023156-3023276 1 7.39e-05 . AATCGATA ACAGAAAATC chr2L:3144853-3144973 18 7.39e-05 CCGTTGGAGC AATCGATA ACTCCCGGGT chr3R:13088526-13088646 3 7.39e-05 AC AATCGATA ACTGGAAATG chr2L:20927779-20927899 79 7.39e-05 ATTTCGAACC TATCGATT TCGATGTAGG chr2R:11150056-11150176 55 7.39e-05 GCCCACTGGC AATCGATA ACGTGCGCAG chr2R:11452532-11452652 8 7.39e-05 GGCGATT AATCGATA ACCGTAGCGG chr3L:6550596-6550716 90 7.39e-05 GCACCGATAG TATCGATT AGGCATAGCT chr2R:14503849-14503969 47 7.39e-05 CTGATCGTTC AATCGATA GTTGGCAGCC chr3L:20393485-20393605 68 7.39e-05 ACAAATGGTA TATCGATT ATTTCACTCT chr3L:9836756-9836876 69 7.39e-05 GATTACATTT AATCGATA CTTGCGTATC chr3R:27283706-27283826 44 7.39e-05 AGCCATCGAT TATCGATT ACCGCGCAAT chrX:12903478-12903598 82 7.39e-05 GCGCTGAATC TATCGATT GCACTCGATT chr2R:18128370-18128490 37 7.39e-05 CGTGGTCTGT TATCGATT CGATATCGAA chr3R:23924303-23924423 65 7.39e-05 TCAAATGAGT TATCGATT ACGGGCAGCT chrX:4938071-4938191 61 7.39e-05 TTCGGCAATT TATCGATT AGTGCTGTTA chr2L:4463494-4463614 88 1.17e-04 GAATTTCGAA CATCGATA ATAAATCGAT chr3R:20552237-20552357 47 1.17e-04 TACCAGCATA TTTCGATA TACAGCACCC chr2L:19580310-19580430 91 1.17e-04 AGCGTATCGT CATCGATA GGCGGCCAAT chr3L:4103483-4103603 71 1.17e-04 TGGCGCGAAC CATCGATA TGCGCAGACA chr3R:23927609-23927729 106 1.17e-04 AATAGGCAAC TTTCGATA GGACGAA chr2L:10056811-10056931 91 1.17e-04 TGGCATCAAA TTTCGATA ACTGACAAAG chr3L:21335106-21335226 86 1.17e-04 CATCGCCCAA CATCGATA TCAAGAGAAA chrX:3175069-3175189 44 1.17e-04 AAAATTCGAG TTTCGATA AACGGTTAAC chr3L:8449331-8449451 73 1.35e-04 TTCTTGTGGC TATCGATG TTAGGCGCAG chr2L:3172751-3172871 43 1.35e-04 TATAATCGGT TATCGATG ACATACGACT chr2L:10769938-10770058 71 1.85e-04 GCTGTGCTCT TATCGAAA TGCCTTATCG chrX:941009-941129 43 1.85e-04 ATACCGTATA TATCGAAA GCCATAATAA chr2R:6636008-6636128 68 1.85e-04 TAGCCAAATC AATCGATT GTAAGTATTC chr2R:18614975-18615095 59 1.85e-04 ATAGACTGCT AATCGATT ATTAGCAGCT chr3L:20006341-20006461 60 1.85e-04 CGATTCTTGC AATCGATT TTAGCATTTT chr3R:5374941-5375061 49 1.85e-04 ACCGATAACA AATCGATT AAGCACTGTC chrX:10595880-10596000 15 1.85e-04 CGGATACCGT TATCGAAA CATTCGATTA chr2R:10886714-10886834 15 2.04e-04 AGTGCCTGCT TACCGATA GACGCTGTAT chr3R:5550608-5550728 87 2.04e-04 CGTCACTCGA TACCGATA CCCGCCAATT chr2R:13485555-13485675 34 2.22e-04 TTCAAATCGG TATCGGTA CTGGGCATTA chr2R:6214097-6214217 50 2.22e-04 CAGCAACTAT TATCGGTA GTCCCGCTAA chrX:3965251-3965371 50 3.14e-04 CGTAAAAACA ATTCGATA CCAGGGCTGC chr3L:13389995-13390115 36 3.14e-04 TGTAACCGTA TTTCGATT ACTGAGATAT chrX:5622558-5622678 16 3.14e-04 GCCACTCGAA ATTCGATA GGTGCGACAA chr3R:24130215-24130335 91 3.14e-04 CAGACAAAAC CATCGATT GGCTGGCGAT chr3R:19229367-19229487 16 3.14e-04 TTTTTGTCGA TAACGATA GGCGTTAAGT chrX:7066787-7066907 113 3.14e-04 CGAATATGGT ATTCGATA chr3L:1777392-1777512 23 3.14e-04 CGCTCTCCGA TAACGATA ACTGTGCCGC chr3L:1318346-1318466 35 3.14e-04 TTAAACCCGA TAACGATA GCTTCGCTTC chr2R:13846273-13846393 108 3.14e-04 AAATTGGAAC TTTCGATT GTGGG chr3R:21359951-21360071 9 3.33e-04 AGCTCAAC AATCGATG GTGTATCAAG chr3R:5821363-5821483 108 3.33e-04 AAGACCAAAA AATCGATG ACAAA chr2L:8449515-8449635 33 3.83e-04 CCACAACAAC AATCGAAA CAGCTGTTCG chrX:2727623-2727743 45 3.83e-04 GAATTCGATT AATCGAAA TCCATCGATG chr2L:11004765-11004885 15 3.83e-04 ATTAATATTC AATCGAAA TATACCAAAA chr2R:9143893-9144013 10 4.40e-04 GTCACCCGA TACCGATT GCCGTCCCCT chr2L:19498150-19498270 7 4.40e-04 AAAAAA CTTCGATA AATTCATCGA chrX:1900582-1900702 48 4.40e-04 CAGAACAGAT AACCGATA ACTCCTCTAT chr3L:13412716-13412836 88 5.08e-04 AAGAAAAAAC CATCGATG ACGACGATGG chr3R:21359748-21359868 57 5.08e-04 TTAGCGAAGC TATCGGTT ATCGGCTGTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:4100988-4101108 2.5e-05 59_[+1]_53 chrX:19616085-19616205 2.5e-05 99_[+1]_13 chrX:6759482-6759602 2.5e-05 44_[+1]_68 chr3R:12356257-12356377 2.5e-05 55_[+1]_57 chrX:1342067-1342187 2.5e-05 10_[+1]_102 chr2L:114574-114694 2.5e-05 28_[+1]_84 chrX:9089379-9089499 2.5e-05 111_[+1]_1 chr2R:23865345-23865465 2.5e-05 45_[+1]_67 chr3R:20634676-20634796 2.5e-05 87_[+1]_25 chr2R:18613047-18613167 2.5e-05 16_[+1]_96 chr3L:20816038-20816158 2.5e-05 30_[+1]_82 chr3R:20816164-20816284 2.5e-05 46_[+1]_66 chr3L:21626203-21626323 2.5e-05 2_[+1]_110 chr2L:6717515-6717635 2.5e-05 89_[+1]_23 chr3R:25476904-25477024 2.5e-05 21_[+1]_91 chrX:18830495-18830615 2.5e-05 106_[+1]_6 chr2R:12145653-12145773 2.5e-05 7_[+1]_105 chrX:1695888-1696008 2.5e-05 73_[+1]_39 chrX:2249889-2250009 2.5e-05 96_[+1]_16 chr3L:20361532-20361652 2.5e-05 78_[+1]_34 chr2L:9893356-9893476 2.5e-05 72_[+1]_40 chr2R:10429610-10429730 2.5e-05 77_[+1]_35 chrX:19193425-19193545 2.5e-05 43_[+1]_69 chr3L:3937974-3938094 2.5e-05 36_[+1]_76 chr2R:6715979-6716099 2.5e-05 101_[+1]_11 chr2R:8106297-8106417 2.5e-05 62_[+1]_50 chrX:3723030-3723150 2.5e-05 40_[+1]_72 chr3L:15816373-15816493 2.5e-05 58_[+1]_54 chr3R:15206395-15206515 2.5e-05 101_[+1]_11 chr3L:12794655-12794775 2.5e-05 45_[+1]_67 chr2R:23693903-23694023 2.5e-05 31_[+1]_81 chr3R:12995612-12995732 2.5e-05 14_[+1]_98 chr2R:10821575-10821695 2.5e-05 37_[+1]_75 chr3L:5565138-5565258 2.5e-05 102_[+1]_10 chrX:15475385-15475505 2.5e-05 78_[+1]_34 chrX:15328266-15328386 2.5e-05 23_[+1]_89 chrX:15762866-15762986 2.5e-05 66_[+1]_46 chr2R:22492126-22492246 2.5e-05 31_[+1]_81 chrX:8243299-8243419 2.5e-05 39_[+1]_73 chr2L:18943932-18944052 2.5e-05 65_[+1]_47 chrX:8273334-8273454 2.5e-05 105_[+1]_7 chr2L:4382666-4382786 2.5e-05 105_[+1]_7 chrX:17852632-17852752 2.5e-05 82_[+1]_30 chr3R:29202573-29202693 2.5e-05 60_[+1]_52 chr2R:20262822-20262942 2.5e-05 80_[+1]_32 chr2L:4386015-4386135 2.5e-05 105_[+1]_7 chr3L:14942912-14943032 7.4e-05 22_[+1]_90 chr2R:6746309-6746429 7.4e-05 33_[+1]_79 chr2R:16221753-16221873 7.4e-05 57_[+1]_55 chr2L:3023156-3023276 7.4e-05 [+1]_112 chr2L:3144853-3144973 7.4e-05 17_[+1]_95 chr3R:13088526-13088646 7.4e-05 2_[+1]_110 chr2L:20927779-20927899 7.4e-05 78_[+1]_34 chr2R:11150056-11150176 7.4e-05 54_[+1]_58 chr2R:11452532-11452652 7.4e-05 7_[+1]_105 chr3L:6550596-6550716 7.4e-05 89_[+1]_23 chr2R:14503849-14503969 7.4e-05 46_[+1]_66 chr3L:20393485-20393605 7.4e-05 67_[+1]_45 chr3L:9836756-9836876 7.4e-05 68_[+1]_44 chr3R:27283706-27283826 7.4e-05 43_[+1]_69 chrX:12903478-12903598 7.4e-05 81_[+1]_31 chr2R:18128370-18128490 7.4e-05 36_[+1]_76 chr3R:23924303-23924423 7.4e-05 64_[+1]_48 chrX:4938071-4938191 7.4e-05 60_[+1]_52 chr2L:4463494-4463614 0.00012 87_[+1]_25 chr3R:20552237-20552357 0.00012 46_[+1]_66 chr2L:19580310-19580430 0.00012 90_[+1]_22 chr3L:4103483-4103603 0.00012 70_[+1]_42 chr3R:23927609-23927729 0.00012 105_[+1]_7 chr2L:10056811-10056931 0.00012 90_[+1]_22 chr3L:21335106-21335226 0.00012 85_[+1]_27 chrX:3175069-3175189 0.00012 43_[+1]_69 chr3L:8449331-8449451 0.00014 72_[+1]_40 chr2L:3172751-3172871 0.00014 42_[+1]_70 chr2L:10769938-10770058 0.00019 70_[+1]_42 chrX:941009-941129 0.00019 42_[+1]_70 chr2R:6636008-6636128 0.00019 67_[+1]_45 chr2R:18614975-18615095 0.00019 58_[+1]_54 chr3L:20006341-20006461 0.00019 59_[+1]_53 chr3R:5374941-5375061 0.00019 48_[+1]_64 chrX:10595880-10596000 0.00019 14_[+1]_98 chr2R:10886714-10886834 0.0002 14_[+1]_98 chr3R:5550608-5550728 0.0002 86_[+1]_26 chr2R:13485555-13485675 0.00022 33_[+1]_79 chr2R:6214097-6214217 0.00022 49_[+1]_63 chrX:3965251-3965371 0.00031 49_[+1]_63 chr3L:13389995-13390115 0.00031 35_[+1]_77 chrX:5622558-5622678 0.00031 15_[+1]_97 chr3R:24130215-24130335 0.00031 90_[+1]_22 chr3R:19229367-19229487 0.00031 15_[+1]_97 chrX:7066787-7066907 0.00031 112_[+1] chr3L:1777392-1777512 0.00031 22_[+1]_90 chr3L:1318346-1318466 0.00031 34_[+1]_78 chr2R:13846273-13846393 0.00031 107_[+1]_5 chr3R:21359951-21360071 0.00033 8_[+1]_104 chr3R:5821363-5821483 0.00033 107_[+1]_5 chr2L:8449515-8449635 0.00038 32_[+1]_80 chrX:2727623-2727743 0.00038 44_[+1]_68 chr2L:11004765-11004885 0.00038 14_[+1]_98 chr2R:9143893-9144013 0.00044 9_[+1]_103 chr2L:19498150-19498270 0.00044 6_[+1]_106 chrX:1900582-1900702 0.00044 47_[+1]_65 chr3L:13412716-13412836 0.00051 87_[+1]_25 chr3R:21359748-21359868 0.00051 56_[+1]_56 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=104 chrX:4100988-4101108 ( 60) TATCGATA 1 chrX:19616085-19616205 ( 100) TATCGATA 1 chrX:6759482-6759602 ( 45) TATCGATA 1 chr3R:12356257-12356377 ( 56) TATCGATA 1 chrX:1342067-1342187 ( 11) TATCGATA 1 chr2L:114574-114694 ( 29) TATCGATA 1 chrX:9089379-9089499 ( 112) TATCGATA 1 chr2R:23865345-23865465 ( 46) TATCGATA 1 chr3R:20634676-20634796 ( 88) TATCGATA 1 chr2R:18613047-18613167 ( 17) TATCGATA 1 chr3L:20816038-20816158 ( 31) TATCGATA 1 chr3R:20816164-20816284 ( 47) TATCGATA 1 chr3L:21626203-21626323 ( 3) TATCGATA 1 chr2L:6717515-6717635 ( 90) TATCGATA 1 chr3R:25476904-25477024 ( 22) TATCGATA 1 chrX:18830495-18830615 ( 107) TATCGATA 1 chr2R:12145653-12145773 ( 8) TATCGATA 1 chrX:1695888-1696008 ( 74) TATCGATA 1 chrX:2249889-2250009 ( 97) TATCGATA 1 chr3L:20361532-20361652 ( 79) TATCGATA 1 chr2L:9893356-9893476 ( 73) TATCGATA 1 chr2R:10429610-10429730 ( 78) TATCGATA 1 chrX:19193425-19193545 ( 44) TATCGATA 1 chr3L:3937974-3938094 ( 37) TATCGATA 1 chr2R:6715979-6716099 ( 102) TATCGATA 1 chr2R:8106297-8106417 ( 63) TATCGATA 1 chrX:3723030-3723150 ( 41) TATCGATA 1 chr3L:15816373-15816493 ( 59) TATCGATA 1 chr3R:15206395-15206515 ( 102) TATCGATA 1 chr3L:12794655-12794775 ( 46) TATCGATA 1 chr2R:23693903-23694023 ( 32) TATCGATA 1 chr3R:12995612-12995732 ( 15) TATCGATA 1 chr2R:10821575-10821695 ( 38) TATCGATA 1 chr3L:5565138-5565258 ( 103) TATCGATA 1 chrX:15475385-15475505 ( 79) TATCGATA 1 chrX:15328266-15328386 ( 24) TATCGATA 1 chrX:15762866-15762986 ( 67) TATCGATA 1 chr2R:22492126-22492246 ( 32) TATCGATA 1 chrX:8243299-8243419 ( 40) TATCGATA 1 chr2L:18943932-18944052 ( 66) TATCGATA 1 chrX:8273334-8273454 ( 106) TATCGATA 1 chr2L:4382666-4382786 ( 106) TATCGATA 1 chrX:17852632-17852752 ( 83) TATCGATA 1 chr3R:29202573-29202693 ( 61) TATCGATA 1 chr2R:20262822-20262942 ( 81) TATCGATA 1 chr2L:4386015-4386135 ( 106) TATCGATA 1 chr3L:14942912-14943032 ( 23) TATCGATT 1 chr2R:6746309-6746429 ( 34) AATCGATA 1 chr2R:16221753-16221873 ( 58) TATCGATT 1 chr2L:3023156-3023276 ( 1) AATCGATA 1 chr2L:3144853-3144973 ( 18) AATCGATA 1 chr3R:13088526-13088646 ( 3) AATCGATA 1 chr2L:20927779-20927899 ( 79) TATCGATT 1 chr2R:11150056-11150176 ( 55) AATCGATA 1 chr2R:11452532-11452652 ( 8) AATCGATA 1 chr3L:6550596-6550716 ( 90) TATCGATT 1 chr2R:14503849-14503969 ( 47) AATCGATA 1 chr3L:20393485-20393605 ( 68) TATCGATT 1 chr3L:9836756-9836876 ( 69) AATCGATA 1 chr3R:27283706-27283826 ( 44) TATCGATT 1 chrX:12903478-12903598 ( 82) TATCGATT 1 chr2R:18128370-18128490 ( 37) TATCGATT 1 chr3R:23924303-23924423 ( 65) TATCGATT 1 chrX:4938071-4938191 ( 61) TATCGATT 1 chr2L:4463494-4463614 ( 88) CATCGATA 1 chr3R:20552237-20552357 ( 47) TTTCGATA 1 chr2L:19580310-19580430 ( 91) CATCGATA 1 chr3L:4103483-4103603 ( 71) CATCGATA 1 chr3R:23927609-23927729 ( 106) TTTCGATA 1 chr2L:10056811-10056931 ( 91) TTTCGATA 1 chr3L:21335106-21335226 ( 86) CATCGATA 1 chrX:3175069-3175189 ( 44) TTTCGATA 1 chr3L:8449331-8449451 ( 73) TATCGATG 1 chr2L:3172751-3172871 ( 43) TATCGATG 1 chr2L:10769938-10770058 ( 71) TATCGAAA 1 chrX:941009-941129 ( 43) TATCGAAA 1 chr2R:6636008-6636128 ( 68) AATCGATT 1 chr2R:18614975-18615095 ( 59) AATCGATT 1 chr3L:20006341-20006461 ( 60) AATCGATT 1 chr3R:5374941-5375061 ( 49) AATCGATT 1 chrX:10595880-10596000 ( 15) TATCGAAA 1 chr2R:10886714-10886834 ( 15) TACCGATA 1 chr3R:5550608-5550728 ( 87) TACCGATA 1 chr2R:13485555-13485675 ( 34) TATCGGTA 1 chr2R:6214097-6214217 ( 50) TATCGGTA 1 chrX:3965251-3965371 ( 50) ATTCGATA 1 chr3L:13389995-13390115 ( 36) TTTCGATT 1 chrX:5622558-5622678 ( 16) ATTCGATA 1 chr3R:24130215-24130335 ( 91) CATCGATT 1 chr3R:19229367-19229487 ( 16) TAACGATA 1 chrX:7066787-7066907 ( 113) ATTCGATA 1 chr3L:1777392-1777512 ( 23) TAACGATA 1 chr3L:1318346-1318466 ( 35) TAACGATA 1 chr2R:13846273-13846393 ( 108) TTTCGATT 1 chr3R:21359951-21360071 ( 9) AATCGATG 1 chr3R:5821363-5821483 ( 108) AATCGATG 1 chr2L:8449515-8449635 ( 33) AATCGAAA 1 chrX:2727623-2727743 ( 45) AATCGAAA 1 chr2L:11004765-11004885 ( 15) AATCGAAA 1 chr2R:9143893-9144013 ( 10) TACCGATT 1 chr2L:19498150-19498270 ( 7) CTTCGATA 1 chrX:1900582-1900702 ( 48) AACCGATA 1 chr3L:13412716-13412836 ( 88) CATCGATG 1 chr3R:21359748-21359868 ( 57) TATCGGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.24754 E= 2.4e-068 -51 -169 -1334 138 165 -1334 -1334 -155 -332 -250 -1334 173 -1334 220 -1334 -1334 -1334 -1334 223 -1334 175 -1334 -289 -1334 -232 -1334 -1334 175 142 -1334 -215 -62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 104 E= 2.4e-068 0.201923 0.067308 0.000000 0.730769 0.903846 0.000000 0.000000 0.096154 0.028846 0.038462 0.000000 0.932692 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.971154 0.000000 0.028846 0.000000 0.057692 0.000000 0.000000 0.942308 0.769231 0.000000 0.048077 0.182692 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-1 regular expression -------------------------------------------------------------------------------- [TA]ATCGATA -------------------------------------------------------------------------------- Time 7.31 secs. ******************************************************************************** ******************************************************************************** MOTIF SWGCTGTT MEME-2 width = 8 sites = 49 llr = 443 E-value = 6.0e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :3:::::: pos.-specific C 5::a:::: probability G 51a::a1: matrix T :6::a:9a bits 2.2 ** * 2.0 ** * 1.8 **** * 1.6 **** * Relative 1.3 ****** Entropy 1.1 ****** (13.0 bits) 0.9 * ****** 0.7 * ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GTGCTGTT consensus CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:20634676-20634796 12 1.33e-05 TGTTGAGATC GTGCTGTT AAGCGTCTGT chr3R:30046706-30046826 11 1.33e-05 TAAAGTGACA GTGCTGTT AAACGCACTG chr3R:24585163-24585283 27 1.33e-05 CACTGCTTGA GTGCTGTT AGGCTGCGCT chr2R:6214097-6214217 97 1.33e-05 TTGTGTACCA GTGCTGTT AAGACATCTG chr3R:25851307-25851427 41 1.33e-05 CTGAAACATG GTGCTGTT AACTCATAAC chr3L:22773439-22773559 54 1.33e-05 AGCACACACA GTGCTGTT AGTGGCGCCC chrX:15760720-15760840 14 1.33e-05 TATATTAACT GTGCTGTT AAGCGCATCA chr3R:21359748-21359868 41 1.33e-05 AGCACAAGCA GTGCTGTT AGCGAAGCTA chr2R:13846273-13846393 53 1.33e-05 CAGCTACAGC GTGCTGTT AAGCGCGGCC chrX:3880636-3880756 50 1.33e-05 ACTTAACAGC GTGCTGTT ATGCGCATGT chr2R:21720365-21720485 60 1.33e-05 GACACGCTGC GTGCTGTT AGGCGCCGTT chr3L:18820704-18820824 49 1.33e-05 AGCACGCTGA GTGCTGTT CGGCGAGCAG chrX:4938071-4938191 70 1.33e-05 TTATCGATTA GTGCTGTT AACGCTACAG chr3R:8806221-8806341 83 1.33e-05 GCTGCCCGTG GTGCTGTT AAACGCAAGC chrX:2738757-2738877 21 1.33e-05 AGTGCAGTGT GTGCTGTT AGGCGCGAAG chrX:22473610-22473730 59 1.33e-05 ACGTAACAGA GTGCTGTT AGGCGCAGCA chrX:17886472-17886592 28 2.67e-05 TTTTAtgata ctgctgtt gttgttgctg chrX:20162730-20162850 104 2.67e-05 TTGCCTAAAA CTGCTGTT CTGAAAAAA chr3L:21335106-21335226 41 2.67e-05 ATACTCACCA CTGCTGTT AAGCGCTACA chr2L:1732296-1732416 110 2.67e-05 AATTTATAGC CTGCTGTT ATT chr2L:4386015-4386135 53 2.67e-05 ATGATAGCAG CTGCTGTT AAATTGCTGT chr2R:6746309-6746429 63 5.41e-05 AGCGATCGAC CAGCTGTT GCTGTTATCG chr2R:16221753-16221873 6 5.41e-05 TCCCA CAGCTGTT TTACTTAAGC chrX:1342067-1342187 46 5.41e-05 ATTGCTGTTA CAGCTGTT CGCGCATATG chr3R:12401814-12401934 36 5.41e-05 TGACTCAAAT CAGCTGTT GCTCGCCAAA chr2R:11150056-11150176 8 5.41e-05 AGGTACA CAGCTGTT TGTCATCGGT chr2L:4463494-4463614 17 5.41e-05 GCGTTTATCT CAGCTGTT AAATATGGTA chr2R:20278879-20278999 58 5.41e-05 CTGTTAAGCT CAGCTGTT CGGTATTGAA chr3R:5463328-5463448 105 5.41e-05 GAAGTAAACT CAGCTGTT TTTGCGCC chr2L:8449515-8449635 41 5.41e-05 ACAATCGAAA CAGCTGTT CGTCTGTGGA chrX:940800-940920 67 5.41e-05 CAACAAACAT CAGCTGTT GTTGCTGCTT chr3L:1777392-1777512 45 5.41e-05 TGCCGCAAAT CAGCTGTT CCGGCTCTGG chr2L:5096336-5096456 33 5.41e-05 GTGCTAACAT CAGCTGTT GGGGGCGCGT chr3L:9358894-9359014 43 5.41e-05 TTTTTGCCAC CAGCTGTT GCGTCCAACA chr2R:21025018-21025138 93 5.41e-05 CACTGGCGAA CAGCTGTT TTTTGTCAAT chrX:16637338-16637458 19 6.42e-05 TTTCGGCTCG GTGCTGGT AGAGATGGCA chrX:9089379-9089499 18 6.42e-05 AAACTTTCGA GTGCTGGT TTGTGTCAAC chr2L:3530359-3530479 50 6.42e-05 AGGGAGACTT GTGCTGGT AAGCGCAGAC chr3L:4103483-4103603 107 7.44e-05 TACTGCTCTG CTGCTGGT TTATTT chrX:18385231-18385351 90 8.45e-05 GGCTAACAGC GGGCTGTT GAGCGCACTT chr2L:3171075-3171195 69 8.45e-05 CCACAACAGT GGGCTGTT AGGCGCAAAA chrX:11124806-11124926 106 1.05e-04 GTTCCAATCA GAGCTGGT ATATATC chrX:13811577-13811697 78 1.05e-04 AGTACACTAT CGGCTGTT AACGGCTCTG chr3R:24530523-24530643 78 1.16e-04 TGCTACTTAC CAGCTGGT ATATTTTAGA chr3L:5565138-5565258 67 1.16e-04 CGGTATTGGG CAGCTGGT CACACTGCCA chr3L:17051179-17051299 59 1.26e-04 GTAGGATTTT GCGCTGTT TGCGCGCCTG chrX:8273334-8273454 1 1.26e-04 . GCGCTGTT AACGCTAACA chr3L:21343676-21343796 17 1.54e-04 CGAGCGCTGA TTGCTGTT TTTGTGGCAA chr2R:15682669-15682789 8 1.54e-04 TTAAAAT TTGCTGTT TTAGTATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:20634676-20634796 1.3e-05 11_[+2]_101 chr3R:30046706-30046826 1.3e-05 10_[+2]_102 chr3R:24585163-24585283 1.3e-05 26_[+2]_86 chr2R:6214097-6214217 1.3e-05 96_[+2]_16 chr3R:25851307-25851427 1.3e-05 40_[+2]_72 chr3L:22773439-22773559 1.3e-05 53_[+2]_59 chrX:15760720-15760840 1.3e-05 13_[+2]_99 chr3R:21359748-21359868 1.3e-05 40_[+2]_72 chr2R:13846273-13846393 1.3e-05 52_[+2]_60 chrX:3880636-3880756 1.3e-05 49_[+2]_63 chr2R:21720365-21720485 1.3e-05 59_[+2]_53 chr3L:18820704-18820824 1.3e-05 48_[+2]_64 chrX:4938071-4938191 1.3e-05 69_[+2]_43 chr3R:8806221-8806341 1.3e-05 82_[+2]_30 chrX:2738757-2738877 1.3e-05 20_[+2]_92 chrX:22473610-22473730 1.3e-05 58_[+2]_54 chrX:17886472-17886592 2.7e-05 27_[+2]_85 chrX:20162730-20162850 2.7e-05 103_[+2]_9 chr3L:21335106-21335226 2.7e-05 40_[+2]_72 chr2L:1732296-1732416 2.7e-05 109_[+2]_3 chr2L:4386015-4386135 2.7e-05 52_[+2]_60 chr2R:6746309-6746429 5.4e-05 62_[+2]_50 chr2R:16221753-16221873 5.4e-05 5_[+2]_107 chrX:1342067-1342187 5.4e-05 45_[+2]_67 chr3R:12401814-12401934 5.4e-05 35_[+2]_77 chr2R:11150056-11150176 5.4e-05 7_[+2]_105 chr2L:4463494-4463614 5.4e-05 16_[+2]_96 chr2R:20278879-20278999 5.4e-05 57_[+2]_55 chr3R:5463328-5463448 5.4e-05 104_[+2]_8 chr2L:8449515-8449635 5.4e-05 40_[+2]_72 chrX:940800-940920 5.4e-05 66_[+2]_46 chr3L:1777392-1777512 5.4e-05 44_[+2]_68 chr2L:5096336-5096456 5.4e-05 32_[+2]_80 chr3L:9358894-9359014 5.4e-05 42_[+2]_70 chr2R:21025018-21025138 5.4e-05 92_[+2]_20 chrX:16637338-16637458 6.4e-05 18_[+2]_94 chrX:9089379-9089499 6.4e-05 17_[+2]_95 chr2L:3530359-3530479 6.4e-05 49_[+2]_63 chr3L:4103483-4103603 7.4e-05 106_[+2]_6 chrX:18385231-18385351 8.5e-05 89_[+2]_23 chr2L:3171075-3171195 8.5e-05 68_[+2]_44 chrX:11124806-11124926 0.00011 105_[+2]_7 chrX:13811577-13811697 0.00011 77_[+2]_35 chr3R:24530523-24530643 0.00012 77_[+2]_35 chr3L:5565138-5565258 0.00012 66_[+2]_46 chr3L:17051179-17051299 0.00013 58_[+2]_54 chrX:8273334-8273454 0.00013 [+2]_112 chr3L:21343676-21343796 0.00015 16_[+2]_96 chr2R:15682669-15682789 0.00015 7_[+2]_105 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SWGCTGTT width=8 seqs=49 chr3R:20634676-20634796 ( 12) GTGCTGTT 1 chr3R:30046706-30046826 ( 11) GTGCTGTT 1 chr3R:24585163-24585283 ( 27) GTGCTGTT 1 chr2R:6214097-6214217 ( 97) GTGCTGTT 1 chr3R:25851307-25851427 ( 41) GTGCTGTT 1 chr3L:22773439-22773559 ( 54) GTGCTGTT 1 chrX:15760720-15760840 ( 14) GTGCTGTT 1 chr3R:21359748-21359868 ( 41) GTGCTGTT 1 chr2R:13846273-13846393 ( 53) GTGCTGTT 1 chrX:3880636-3880756 ( 50) GTGCTGTT 1 chr2R:21720365-21720485 ( 60) GTGCTGTT 1 chr3L:18820704-18820824 ( 49) GTGCTGTT 1 chrX:4938071-4938191 ( 70) GTGCTGTT 1 chr3R:8806221-8806341 ( 83) GTGCTGTT 1 chrX:2738757-2738877 ( 21) GTGCTGTT 1 chrX:22473610-22473730 ( 59) GTGCTGTT 1 chrX:17886472-17886592 ( 28) CTGCTGTT 1 chrX:20162730-20162850 ( 104) CTGCTGTT 1 chr3L:21335106-21335226 ( 41) CTGCTGTT 1 chr2L:1732296-1732416 ( 110) CTGCTGTT 1 chr2L:4386015-4386135 ( 53) CTGCTGTT 1 chr2R:6746309-6746429 ( 63) CAGCTGTT 1 chr2R:16221753-16221873 ( 6) CAGCTGTT 1 chrX:1342067-1342187 ( 46) CAGCTGTT 1 chr3R:12401814-12401934 ( 36) CAGCTGTT 1 chr2R:11150056-11150176 ( 8) CAGCTGTT 1 chr2L:4463494-4463614 ( 17) CAGCTGTT 1 chr2R:20278879-20278999 ( 58) CAGCTGTT 1 chr3R:5463328-5463448 ( 105) CAGCTGTT 1 chr2L:8449515-8449635 ( 41) CAGCTGTT 1 chrX:940800-940920 ( 67) CAGCTGTT 1 chr3L:1777392-1777512 ( 45) CAGCTGTT 1 chr2L:5096336-5096456 ( 33) CAGCTGTT 1 chr3L:9358894-9359014 ( 43) CAGCTGTT 1 chr2R:21025018-21025138 ( 93) CAGCTGTT 1 chrX:16637338-16637458 ( 19) GTGCTGGT 1 chrX:9089379-9089499 ( 18) GTGCTGGT 1 chr2L:3530359-3530479 ( 50) GTGCTGGT 1 chr3L:4103483-4103603 ( 107) CTGCTGGT 1 chrX:18385231-18385351 ( 90) GGGCTGTT 1 chr2L:3171075-3171195 ( 69) GGGCTGTT 1 chrX:11124806-11124926 ( 106) GAGCTGGT 1 chrX:13811577-13811697 ( 78) CGGCTGTT 1 chr3R:24530523-24530643 ( 78) CAGCTGGT 1 chr3L:5565138-5565258 ( 67) CAGCTGGT 1 chr3L:17051179-17051299 ( 59) GCGCTGTT 1 chrX:8273334-8273454 ( 1) GCGCTGTT 1 chr3L:21343676-21343796 ( 17) TTGCTGTT 1 chr2R:15682669-15682789 ( 8) TTGCTGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.0849 E= 6.0e-022 -1226 111 120 -278 27 -241 -180 97 -1226 -1226 223 -1226 -1226 220 -1226 -1226 -1226 -1226 -1226 183 -1226 -1226 223 -1226 -1226 -1226 -58 161 -1226 -1226 -1226 183 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 49 E= 6.0e-022 0.000000 0.469388 0.489796 0.040816 0.346939 0.040816 0.061224 0.551020 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.142857 0.857143 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGCTGTT MEME-2 regular expression -------------------------------------------------------------------------------- [GC][TA]GCTGTT -------------------------------------------------------------------------------- Time 13.73 secs. ******************************************************************************** ******************************************************************************** MOTIF GGYMACAC MEME-3 width = 8 sites = 48 llr = 424 E-value = 2.1e-016 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::48:9: pos.-specific C ::46:a:a probability G aa1:2::: matrix T ::5:::1: bits 2.2 * * * 2.0 ** * * 1.8 ** * * 1.6 ** * * Relative 1.3 ** * * Entropy 1.1 ** ***** (12.7 bits) 0.9 ** ***** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGTCACAC consensus CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:13485555-13485675 69 1.09e-05 TGCTTTATAC GGTCACAC TGTTCCAAAA chr3L:1329889-1330009 93 1.09e-05 TTGCGCATAC GGTCACAC TGCTACCTTG chr2R:8952312-8952432 23 1.09e-05 CTGCAGGTGC GGTCACAC TGTTTGCAAA chr3R:20621872-20621992 84 1.09e-05 CTTAGTTGAC GGTCACAC AGCGCACCGA chr2L:6717515-6717635 56 1.09e-05 TTGCGTAAGC GGTCACAC TGCTCCGCTT chrX:19623070-19623190 50 1.09e-05 ATGCAGCCGC GGTCACAC TACTAGCACT chr2L:6677559-6677679 94 1.09e-05 GGTCAACTTC GGTCACAC TATTTTTAAA chr3R:15320686-15320806 104 1.09e-05 CCCGAACTTT GGTCACAC TTTACCATT chrX:18380015-18380135 88 1.09e-05 ATCAAGATAC GGTCACAC CGTATCTAGC chrX:15762866-15762986 49 1.09e-05 CACGCACGTG GGTCACAC TGCCATCGTA chr2L:4818193-4818313 102 1.09e-05 ATAAACTAAT GGTCACAC TTTTATTTGG chr2L:12097784-12097904 73 1.09e-05 CTTGTCAATT GGTCACAC TGCACTGAAT chrX:18137074-18137194 86 1.09e-05 TAAGAAGAAC GGTCACAC TGGCCCGTGC chr3R:23924303-23924423 98 1.09e-05 TTCCGCATGC GGTCACAC TTAAAAGTGC chr2R:15682669-15682789 41 1.09e-05 ATTTGCGGTC GGTCACAC TGAAATTCAA chr2L:20927779-20927899 103 1.93e-05 TAGGAGAAAC GGCCACAC TTTACAACTA chr2R:6807564-6807684 63 1.93e-05 AAGCCGCCAC GGCCACAC TGCACCCTCA chrX:15996964-15997084 70 1.93e-05 TTGTCAATAC GGCCACAC TGTTGGCAAC chr3L:7243912-7244032 58 3.38e-05 GTAAGGAGAT GGTAACAC AAAAATACTG chr3R:5374941-5375061 91 3.38e-05 TTTATGATCT GGTAACAC TTTCCGTCGC chr2L:11004765-11004885 58 3.38e-05 GAGGATATCT GGTAACAC TTAGCAGAAG chr2R:21168845-21168965 110 4.50e-05 CAATACATCT GGCAACAC TGG chr3R:9679897-9680017 38 4.50e-05 TTGTTATGTT GGCAACAC TGTTGCTGTG chr3R:15485979-15486099 9 4.50e-05 CAAAGTGT GGCAACAC CAGCAAGTTT chr3L:9836756-9836876 36 4.50e-05 TACTAGAGCT GGCAACAC AGCGATGGCA chrX:19201753-19201873 75 5.31e-05 TGCGCGGCCT GGTCGCAC TGCCCGTCTG chr2L:544656-544776 59 5.31e-05 TCTGTGGTGG GGTCGCAC CGCCACCAAA chr2R:23553975-23554095 107 5.31e-05 GCTGTAACCT GGTCGCAC TTTTCA chr2R:23357387-23357507 32 6.77e-05 GTATAGAAAC GGGCACAC TAATGCGCAG chr3R:27954025-27954145 106 6.77e-05 GCGGATCTTT GGGCACAC TACGAGC chr3R:5463328-5463448 50 6.77e-05 GCAGGAAAAG GGGCACAC TGGCAGACCC chr2R:8170206-8170326 37 6.77e-05 GCAAACAAAC GGGCACAC TACTTTTTGT chr2R:23865345-23865465 84 7.83e-05 GGGCACCTCC GGTCACTC TAACCGGTTA chr2R:12145653-12145773 85 7.83e-05 GGATTCCAGT GGTCACTC TAACGATACG chr2R:9143893-9144013 87 8.65e-05 TTACGCAGCT GGCCACTC TGGTTAGCAA chrX:5622558-5622678 5 8.65e-05 GATA GGCCACTC GAAATTCGAT chrX:15697356-15697476 92 1.06e-04 TAGCCAGGCT GGCAGCAC TGCCGGATCA chrX:11891942-11892062 42 1.06e-04 AGTGCGATCT GGCAGCAC CGCTCAGAAC chrX:13612065-13612185 47 1.06e-04 TAAACCATCT GGCAGCAC TGCCAAATAA chr2R:8106297-8106417 51 1.06e-04 TAGCTCAGCG GGCAGCAC TGCCTATCGA chrX:7066787-7066907 35 1.06e-04 TTGGCGGTGT GGCAGCAC TGATTCACTC chr3L:1318346-1318466 74 1.06e-04 GAGCCGCGTT GGCAGCAC CGTTGGCGCA chr3R:18572977-18573097 103 1.17e-04 AACAGCGGAA GGGAACAC CGAAACGATG chr3L:14942912-14943032 9 1.48e-04 AAAGCCCG GGCAACTC CTCGCCTATC chrX:496411-496531 4 1.48e-04 TCT GGCAACTC CTCTAAGTCG chr3R:8806221-8806341 44 1.48e-04 GGGGCGAGGT GGCAACTC TGCGGGGAGT chr2L:11178972-11179092 77 1.92e-04 CTAACGCGTG GTTCACAC TACAAAAAAA chr2L:10056811-10056931 73 1.92e-04 AGGCACCTAC GTTCACAC TGGCATCAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:13485555-13485675 1.1e-05 68_[+3]_44 chr3L:1329889-1330009 1.1e-05 92_[+3]_20 chr2R:8952312-8952432 1.1e-05 22_[+3]_90 chr3R:20621872-20621992 1.1e-05 83_[+3]_29 chr2L:6717515-6717635 1.1e-05 55_[+3]_57 chrX:19623070-19623190 1.1e-05 49_[+3]_63 chr2L:6677559-6677679 1.1e-05 93_[+3]_19 chr3R:15320686-15320806 1.1e-05 103_[+3]_9 chrX:18380015-18380135 1.1e-05 87_[+3]_25 chrX:15762866-15762986 1.1e-05 48_[+3]_64 chr2L:4818193-4818313 1.1e-05 101_[+3]_11 chr2L:12097784-12097904 1.1e-05 72_[+3]_40 chrX:18137074-18137194 1.1e-05 85_[+3]_27 chr3R:23924303-23924423 1.1e-05 97_[+3]_15 chr2R:15682669-15682789 1.1e-05 40_[+3]_72 chr2L:20927779-20927899 1.9e-05 102_[+3]_10 chr2R:6807564-6807684 1.9e-05 62_[+3]_50 chrX:15996964-15997084 1.9e-05 69_[+3]_43 chr3L:7243912-7244032 3.4e-05 57_[+3]_55 chr3R:5374941-5375061 3.4e-05 90_[+3]_22 chr2L:11004765-11004885 3.4e-05 57_[+3]_55 chr2R:21168845-21168965 4.5e-05 109_[+3]_3 chr3R:9679897-9680017 4.5e-05 37_[+3]_75 chr3R:15485979-15486099 4.5e-05 8_[+3]_104 chr3L:9836756-9836876 4.5e-05 35_[+3]_77 chrX:19201753-19201873 5.3e-05 74_[+3]_38 chr2L:544656-544776 5.3e-05 58_[+3]_54 chr2R:23553975-23554095 5.3e-05 106_[+3]_6 chr2R:23357387-23357507 6.8e-05 31_[+3]_81 chr3R:27954025-27954145 6.8e-05 105_[+3]_7 chr3R:5463328-5463448 6.8e-05 49_[+3]_63 chr2R:8170206-8170326 6.8e-05 36_[+3]_76 chr2R:23865345-23865465 7.8e-05 83_[+3]_29 chr2R:12145653-12145773 7.8e-05 84_[+3]_28 chr2R:9143893-9144013 8.7e-05 86_[+3]_26 chrX:5622558-5622678 8.7e-05 4_[+3]_108 chrX:15697356-15697476 0.00011 91_[+3]_21 chrX:11891942-11892062 0.00011 41_[+3]_71 chrX:13612065-13612185 0.00011 46_[+3]_66 chr2R:8106297-8106417 0.00011 50_[+3]_62 chrX:7066787-7066907 0.00011 34_[+3]_78 chr3L:1318346-1318466 0.00011 73_[+3]_39 chr3R:18572977-18573097 0.00012 102_[+3]_10 chr3L:14942912-14943032 0.00015 8_[+3]_104 chrX:496411-496531 0.00015 3_[+3]_109 chr3R:8806221-8806341 0.00015 43_[+3]_69 chr2L:11178972-11179092 0.00019 76_[+3]_36 chr2L:10056811-10056931 0.00019 72_[+3]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGYMACAC width=8 seqs=48 chr2R:13485555-13485675 ( 69) GGTCACAC 1 chr3L:1329889-1330009 ( 93) GGTCACAC 1 chr2R:8952312-8952432 ( 23) GGTCACAC 1 chr3R:20621872-20621992 ( 84) GGTCACAC 1 chr2L:6717515-6717635 ( 56) GGTCACAC 1 chrX:19623070-19623190 ( 50) GGTCACAC 1 chr2L:6677559-6677679 ( 94) GGTCACAC 1 chr3R:15320686-15320806 ( 104) GGTCACAC 1 chrX:18380015-18380135 ( 88) GGTCACAC 1 chrX:15762866-15762986 ( 49) GGTCACAC 1 chr2L:4818193-4818313 ( 102) GGTCACAC 1 chr2L:12097784-12097904 ( 73) GGTCACAC 1 chrX:18137074-18137194 ( 86) GGTCACAC 1 chr3R:23924303-23924423 ( 98) GGTCACAC 1 chr2R:15682669-15682789 ( 41) GGTCACAC 1 chr2L:20927779-20927899 ( 103) GGCCACAC 1 chr2R:6807564-6807684 ( 63) GGCCACAC 1 chrX:15996964-15997084 ( 70) GGCCACAC 1 chr3L:7243912-7244032 ( 58) GGTAACAC 1 chr3R:5374941-5375061 ( 91) GGTAACAC 1 chr2L:11004765-11004885 ( 58) GGTAACAC 1 chr2R:21168845-21168965 ( 110) GGCAACAC 1 chr3R:9679897-9680017 ( 38) GGCAACAC 1 chr3R:15485979-15486099 ( 9) GGCAACAC 1 chr3L:9836756-9836876 ( 36) GGCAACAC 1 chrX:19201753-19201873 ( 75) GGTCGCAC 1 chr2L:544656-544776 ( 59) GGTCGCAC 1 chr2R:23553975-23554095 ( 107) GGTCGCAC 1 chr2R:23357387-23357507 ( 32) GGGCACAC 1 chr3R:27954025-27954145 ( 106) GGGCACAC 1 chr3R:5463328-5463448 ( 50) GGGCACAC 1 chr2R:8170206-8170326 ( 37) GGGCACAC 1 chr2R:23865345-23865465 ( 84) GGTCACTC 1 chr2R:12145653-12145773 ( 85) GGTCACTC 1 chr2R:9143893-9144013 ( 87) GGCCACTC 1 chrX:5622558-5622678 ( 5) GGCCACTC 1 chrX:15697356-15697476 ( 92) GGCAGCAC 1 chrX:11891942-11892062 ( 42) GGCAGCAC 1 chrX:13612065-13612185 ( 47) GGCAGCAC 1 chr2R:8106297-8106417 ( 51) GGCAGCAC 1 chrX:7066787-7066907 ( 35) GGCAGCAC 1 chr3L:1318346-1318466 ( 74) GGCAGCAC 1 chr3R:18572977-18573097 ( 103) GGGAACAC 1 chr3L:14942912-14943032 ( 9) GGCAACTC 1 chrX:496411-496531 ( 4) GGCAACTC 1 chr3R:8806221-8806341 ( 44) GGCAACTC 1 chr2L:11178972-11179092 ( 77) GTTCACAC 1 chr2L:10056811-10056931 ( 73) GTTCACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.2994 E= 2.1e-016 -1223 -1223 223 -1223 -1223 -1223 217 -275 -1223 79 -104 89 30 157 -1223 -1223 149 -1223 -19 -1223 -1223 220 -1223 -1223 157 -1223 -1223 -95 -1223 220 -1223 -1223 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 48 E= 2.1e-016 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.958333 0.041667 0.000000 0.375000 0.104167 0.520833 0.354167 0.645833 0.000000 0.000000 0.812500 0.000000 0.187500 0.000000 0.000000 1.000000 0.000000 0.000000 0.854167 0.000000 0.000000 0.145833 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGYMACAC MEME-3 regular expression -------------------------------------------------------------------------------- GG[TC][CA]ACAC -------------------------------------------------------------------------------- Time 19.71 secs. ******************************************************************************** ******************************************************************************** MOTIF GCGCAVHN MEME-4 width = 8 sites = 112 llr = 773 E-value = 7.7e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::6343 pos.-specific C :a:a2232 probability G a:a:2413 matrix T ::::::32 bits 2.2 **** 2.0 **** 1.8 **** 1.6 **** Relative 1.3 **** Entropy 1.1 **** (10.0 bits) 0.9 **** 0.7 ***** 0.4 ****** 0.2 ****** 0.0 -------- Multilevel GCGCAGAG consensus ATA sequence CCC T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:114574-114694 105 8.19e-06 ATTGGTTTTT GCGCAGAG CTAAGCAA chr2R:23357387-23357507 44 8.19e-06 GCACACTAAT GCGCAGAG CTGCCAGATA chr3L:8449331-8449451 85 8.19e-06 TCGATGTTAG GCGCAGAG TCGATAGTCG chr3R:13958724-13958844 66 8.19e-06 GTTTTCGTGG GCGCAGAG AAAAAAATAC chr2R:18128370-18128490 113 8.19e-06 AATTGAGTCT GCGCAGAG chr3R:14890166-14890286 78 2.27e-05 AGCCAACTTT GCGCAGCG CAGTACATTG chr3L:4103483-4103603 80 2.27e-05 CCATCGATAT GCGCAGAC AAACGGTCAT chr2L:3530359-3530479 60 2.27e-05 GTGCTGGTAA GCGCAGAC TAACAGTGTT chrX:18385231-18385351 33 3.69e-05 TGCCAGGGCT GCGCAGTG CTCTAGCGGG chrX:12897302-12897422 20 3.69e-05 TAATCCGCGC GCGCAGCC TTCGCGAAAT chr3R:27283706-27283826 69 3.69e-05 AATTATCGTA GCGCAGTG GCCGGTTTTG chr2L:5096336-5096456 18 3.69e-05 CTGTTAGGTG GCGCAGTG CTAACATCAG chr2R:10886714-10886834 44 6.71e-05 TCGAGTGAAT GCGCAGTC CTGGTCATCG chr3L:20816038-20816158 48 6.71e-05 AAGCAGTGTT GCGCAAAG TGAAACCTAT chrX:15475385-15475505 99 6.71e-05 TTCGGTTATC GCGCAAAG CTTGCCTACT chr3L:13412716-13412836 57 6.71e-05 GGTAAACGCA GCGCAAAG TCGATATAAA chrX:1900582-1900702 35 6.71e-05 GTGTATATGA GCGCAGAA CAGATAACCG chrX:18137074-18137194 50 6.71e-05 CACGGTCGCA GCGCAGTC ATACTGGTTC chr2L:4386015-4386135 82 6.71e-05 GTGCTGTAAG GCGCAGTC CTGTTAGATA chrX:11137025-11137145 48 1.06e-04 CTGGACTGCA GCGCAAAC AGTGCTGGCA chr3L:21626203-21626323 39 1.06e-04 CTTTCCCAAA GCGCAGAT ATCGGCTTTT chr2L:11178972-11179092 4 1.06e-04 CAT GCGCAACG GCACTCTGGT chr3L:20361532-20361652 39 1.06e-04 TTGTTTTGGC GCGCAAAC TACTGATGGC chr2R:24402344-24402464 6 1.06e-04 CTCTC GCGCAAAC GCTTCGTGTT chrX:16325569-16325689 51 1.06e-04 AGATGCGCAT GCGCAACG CGCCAAGATG chr2R:8170206-8170326 25 1.06e-04 GTATACTCCC GCGCAAAC AAACGGGCAC chrX:22473610-22473730 69 1.06e-04 GTGCTGTTAG GCGCAGCA CGCTGAAAAC chrX:19623070-19623190 35 1.52e-04 ATCGGTTACC GCGCAATG CAGCCGCGGT chrX:20162730-20162850 2 1.52e-04 C GCGCAATG AACGTCGGTT chr3R:15206395-15206515 90 1.52e-04 AAAACCCAAA GCGCAGCT TGGATATCGA chrX:15701164-15701284 66 1.52e-04 TGCACAGGCG GCGCAGCT GAGCGGCCAG chr2R:23553975-23554095 6 1.52e-04 GTGTG GCGCAGTA CAGTTGCCCC chr3L:1318346-1318466 87 1.52e-04 AGCACCGTTG GCGCACAG CTGAGCCCGA chr2L:1732296-1732416 80 1.52e-04 CAGACTGTGT GCGCACAG CAGCTCTGTT chrX:8273334-8273454 33 1.52e-04 TGTAACAGAA GCGCAGTA CTTTGCAGCG chr2R:23865345-23865465 10 2.03e-04 GCCAGCGTC GCGCAAAA TATCGTGCAC chr3R:20621872-20621992 93 2.03e-04 CGGTCACACA GCGCACCG AGCTGCGTTT chr3L:6550596-6550716 78 2.03e-04 GGTGCTGGGT GCGCACCG ATAGTATCGA chr3L:12794655-12794775 93 2.03e-04 GTTTGCCATC GCGCAGTT GTCTATATAG chr2R:23693903-23694023 69 2.03e-04 GCGAAGGAAG GCGCAAAA CAAGAAGTGA chr3L:5565138-5565258 33 2.03e-04 TATTGGTTCC GCGCAATC ACTAGTTCCA chr2R:16240690-16240810 2 2.03e-04 G GCGCAAAA GCAAGAGGAA chr2L:4818193-4818313 61 2.03e-04 ATACCAAAGC GCGCAAAA GAATGTTAGG chr2L:3171075-3171195 79 2.03e-04 GGGCTGTTAG GCGCAAAA GAATATGTAT chrX:18499883-18500003 96 2.43e-04 TTATGTATGT GCGCAAAT AAGTCTAAAT chrX:3965251-3965371 66 2.43e-04 TACCAGGGCT GCGCAACA ACTGAATAGG chr2R:14503849-14503969 85 2.43e-04 AGCAGTGACT GCGCAAAT ACATCCGCTC chr2R:23355107-23355227 28 2.43e-04 AGCCCGGCCG GCGCAACA GCGAAAAATC chr3L:8634035-8634155 20 2.43e-04 TTAAAAAAGC GCGCAAAT TGAGTTTGCC chr2L:3172751-3172871 65 2.43e-04 ACGACTGCAC GCGCAACA GTGAAATGTA chr3R:20816164-20816284 87 2.88e-04 AATTCGCTAA GCGCAATA ACGAATATCG chr2R:10429610-10429730 45 2.88e-04 TAGCTGCCGA GCGCACTC TGATGTTGTC chrX:13811577-13811697 59 2.88e-04 GCTCACTGTG GCGCACAA CAGTACACTA chr2L:3144853-3144973 39 3.33e-04 CCCGGGTATC GCGCACCA ATTTCAGGTA chr2R:13168366-13168486 96 3.33e-04 CGCCAATTTG GCGCACAT CTTAAAGATA chr3L:9359096-9359216 60 3.33e-04 TGCGGCCAAA GCGCCGAG GAAACCAACC chr2R:6636008-6636128 38 3.33e-04 GTTTGTTCCA GCGCACAT GTGTGCACAG chrX:3880636-3880756 19 3.33e-04 ATTCAAGCTC GCGCGGAG TTGCCAGATC chr2R:10821575-10821695 17 3.74e-04 TACTTCTCCC GCGCACTA AACTGCTGCA chrX:15328266-15328386 36 3.74e-04 TCGATAACAC GCGCGGCG TTGCCACCTC chrX:18647532-18647652 93 3.74e-04 AGTGCAAGTT GCGCGGCG CGACTGCGAA chr3L:17051179-17051299 79 3.74e-04 CGCGCCTGCT GCGCACCT GGCAACCCTG chrX:19201753-19201873 66 4.12e-04 CTGCTTTCTT GCGCGGCC TGGTCGCACT chr2R:11150056-11150176 67 4.12e-04 TCGATAACGT GCGCAGGG TTGCACAGCG chrX:940800-940920 31 4.12e-04 TGTGCTCTTT GCGCCGCC TGAATTCGCT chr3R:23927609-23927729 41 4.12e-04 GTAGCGGTGT GCGCAGGG ATGCACGATA chr2L:18943932-18944052 79 4.12e-04 CGATACGAGC GCGCACTT AATCGACATT chr2R:13846273-13846393 63 4.12e-04 GTGCTGTTAA GCGCGGCC AGTGTGACCA chrX:7074475-7074595 21 4.12e-04 GTTCTGTTAC GCGCACTT CTGCATTGAA chr3R:24805233-24805353 60 4.64e-04 GTTCGATAGT GCGCGGTC GATATATAGT chrX:2738757-2738877 31 4.64e-04 GTGCTGTTAG GCGCGAAG TGGTTGCTGT chrX:16637338-16637458 78 5.21e-04 AAGTCACTAG GCGCCGAT GAAAATACCA chr2R:24574450-24574570 43 5.21e-04 AACCGCCAAT GCGCCGCA AAGAATTTTG chr3R:25851307-25851427 101 5.21e-04 ATGTTTTTCG GCGCCAAC AAGCATGTGT chr3R:29202573-29202693 77 5.21e-04 TAAATAAAAA GCGCGGCA TTCATTTAAA chr2R:15682669-15682789 73 5.21e-04 GAAGCAGCAC GCGCCGCA GAAATTTGCC chr2R:18613047-18613167 92 6.07e-04 GGATATATCC GCGCCACC AAACAAACGT chr3R:16614429-16614549 56 6.07e-04 TACATCACAT GCGCGATG CTCAAAAtaa chr2L:2979219-2979339 100 6.07e-04 GGTCAAGATA GCGCCGTA AGGTTGGTTT chr3R:5821363-5821483 79 6.07e-04 AGTATATAAT GCGCCGCT ATAGTACTTT chr3R:9679897-9680017 9 7.00e-04 TAAATTTT GCGCCCAC TTAAATGAAT chr2R:8952312-8952432 54 7.00e-04 ACACACACCA GCGCGGTT TTTCGCTGCA chr3L:13389995-13390115 95 7.00e-04 AGATGTTAAA GCGCCATC TATTGATGAA chr2L:6677559-6677679 47 7.00e-04 CGATTCCGAA GCGCGCCG TTGCAGTGTG chr2L:10056811-10056931 21 7.00e-04 TTTTCTCTAC GCGCCGTT GTCCGAAGTT chr3L:1756257-1756377 11 7.00e-04 CCGATAAGTC GCGCCAAA GCTATCGGTC chr2L:19498150-19498270 44 7.00e-04 TCTTCATATG GCGCGATC AAAAGTTTGT chr2R:21720365-21720485 70 7.00e-04 GTGCTGTTAG GCGCCGTT CGGCGTTAGC chr2L:16738352-16738472 2 7.66e-04 G GCGCCAAT GGTAATAGGA chr3R:5219548-5219668 66 7.66e-04 GTTGGCGTAC GCGCACGG CTGCTATCGC chr3L:14942912-14943032 98 8.50e-04 AAAAACAGCG GCGCCACT GAGCCAGAGC chrX:19616085-19616205 30 8.50e-04 TTATGAAATG GCGCCCAA TGACTTGTAA chr3R:13088526-13088646 54 8.50e-04 TAAAAGGTGT GCGCCACT GCTACTTCCC chr3R:24130215-24130335 113 8.50e-04 GGCGATAACA GCGCAAGA chr3R:18200125-18200245 66 8.50e-04 CGCATTCAGT GCGCAAGA ACCTCCGCTT chr3L:22773439-22773559 66 8.50e-04 GCTGTTAGTG GCGCCCTC CCGCTCTCGC chr2R:15568852-15568972 56 8.50e-04 CCGTTCAAAT GCGCACGC ATGGCTTCGG chrX:3175069-3175189 82 8.50e-04 TCACCACGGT GCGCCCAA CAGCACGCAC chr3R:18572977-18573097 13 8.50e-04 AATTTGAATC GCGCGCTC AGTTCAACAG chr2R:22924719-22924839 49 9.11e-04 CAAGCAAAAA GCGCGCCA CTTGCAGTAC chrX:13612065-13612185 70 9.11e-04 AATAAAAAGT GCGCCATT TACTTAAAAA chr2R:6807564-6807684 15 9.11e-04 TGTGACCAGT GCGCGCAT GGTATATTTT chr3R:5464654-5464774 49 9.11e-04 GCCGCAAAAC GCGCGATT GCAAGTGTGA chrX:1695888-1696008 99 9.48e-04 CGCCACTTGG GCGCGCTA TTTAAAATCA chr3L:13502600-13502720 10 9.48e-04 GTTAACAGC GCGCGCCT AACAGCACAC chrX:18515306-18515426 70 9.81e-04 GTTCGCACTA GCGCACGT TTTCCCACCA chr3R:8805564-8805684 96 9.90e-04 TTCGTTTATT GCGCGGGC TGTAAGCGGC chr3L:1329889-1330009 85 1.08e-03 TTAGTACATT GCGCATAC GGTCACACTG chr2L:6919265-6919385 110 1.08e-03 ATTTTtgcat gcgcatac aca chr3L:16595261-16595381 29 1.12e-03 CCAATTAACT GCGCGAGA TAAATTTACG chrX:8243299-8243419 53 1.12e-03 CGATACACTT GCGCATTG CCAAACGTGC chr2R:15573824-15573944 88 1.16e-03 ATATTAAAAT GCGCATAA GATCGCGGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:114574-114694 8.2e-06 104_[+4]_8 chr2R:23357387-23357507 8.2e-06 43_[+4]_69 chr3L:8449331-8449451 8.2e-06 84_[+4]_28 chr3R:13958724-13958844 8.2e-06 65_[+4]_47 chr2R:18128370-18128490 8.2e-06 112_[+4] chr3R:14890166-14890286 2.3e-05 77_[+4]_35 chr3L:4103483-4103603 2.3e-05 79_[+4]_33 chr2L:3530359-3530479 2.3e-05 59_[+4]_53 chrX:18385231-18385351 3.7e-05 32_[+4]_80 chrX:12897302-12897422 3.7e-05 19_[+4]_93 chr3R:27283706-27283826 3.7e-05 68_[+4]_44 chr2L:5096336-5096456 3.7e-05 17_[+4]_95 chr2R:10886714-10886834 6.7e-05 43_[+4]_69 chr3L:20816038-20816158 6.7e-05 47_[+4]_65 chrX:15475385-15475505 6.7e-05 98_[+4]_14 chr3L:13412716-13412836 6.7e-05 56_[+4]_56 chrX:1900582-1900702 6.7e-05 34_[+4]_78 chrX:18137074-18137194 6.7e-05 49_[+4]_63 chr2L:4386015-4386135 6.7e-05 81_[+4]_31 chrX:11137025-11137145 0.00011 47_[+4]_65 chr3L:21626203-21626323 0.00011 38_[+4]_74 chr2L:11178972-11179092 0.00011 3_[+4]_109 chr3L:20361532-20361652 0.00011 38_[+4]_74 chr2R:24402344-24402464 0.00011 5_[+4]_107 chrX:16325569-16325689 0.00011 50_[+4]_62 chr2R:8170206-8170326 0.00011 24_[+4]_88 chrX:22473610-22473730 0.00011 68_[+4]_44 chrX:19623070-19623190 0.00015 34_[+4]_78 chrX:20162730-20162850 0.00015 1_[+4]_111 chr3R:15206395-15206515 0.00015 89_[+4]_23 chrX:15701164-15701284 0.00015 65_[+4]_47 chr2R:23553975-23554095 0.00015 5_[+4]_107 chr3L:1318346-1318466 0.00015 86_[+4]_26 chr2L:1732296-1732416 0.00015 79_[+4]_33 chrX:8273334-8273454 0.00015 32_[+4]_80 chr2R:23865345-23865465 0.0002 9_[+4]_103 chr3R:20621872-20621992 0.0002 92_[+4]_20 chr3L:6550596-6550716 0.0002 77_[+4]_35 chr3L:12794655-12794775 0.0002 92_[+4]_20 chr2R:23693903-23694023 0.0002 68_[+4]_44 chr3L:5565138-5565258 0.0002 32_[+4]_80 chr2R:16240690-16240810 0.0002 1_[+4]_111 chr2L:4818193-4818313 0.0002 60_[+4]_52 chr2L:3171075-3171195 0.0002 78_[+4]_34 chrX:18499883-18500003 0.00024 95_[+4]_17 chrX:3965251-3965371 0.00024 65_[+4]_47 chr2R:14503849-14503969 0.00024 84_[+4]_28 chr2R:23355107-23355227 0.00024 27_[+4]_85 chr3L:8634035-8634155 0.00024 19_[+4]_93 chr2L:3172751-3172871 0.00024 64_[+4]_48 chr3R:20816164-20816284 0.00029 86_[+4]_26 chr2R:10429610-10429730 0.00029 44_[+4]_68 chrX:13811577-13811697 0.00029 58_[+4]_54 chr2L:3144853-3144973 0.00033 38_[+4]_74 chr2R:13168366-13168486 0.00033 95_[+4]_17 chr3L:9359096-9359216 0.00033 59_[+4]_53 chr2R:6636008-6636128 0.00033 37_[+4]_75 chrX:3880636-3880756 0.00033 18_[+4]_94 chr2R:10821575-10821695 0.00037 16_[+4]_96 chrX:15328266-15328386 0.00037 35_[+4]_77 chrX:18647532-18647652 0.00037 92_[+4]_20 chr3L:17051179-17051299 0.00037 78_[+4]_34 chrX:19201753-19201873 0.00041 65_[+4]_47 chr2R:11150056-11150176 0.00041 66_[+4]_46 chrX:940800-940920 0.00041 30_[+4]_82 chr3R:23927609-23927729 0.00041 40_[+4]_72 chr2L:18943932-18944052 0.00041 78_[+4]_34 chr2R:13846273-13846393 0.00041 62_[+4]_50 chrX:7074475-7074595 0.00041 20_[+4]_92 chr3R:24805233-24805353 0.00046 59_[+4]_53 chrX:2738757-2738877 0.00046 30_[+4]_82 chrX:16637338-16637458 0.00052 77_[+4]_35 chr2R:24574450-24574570 0.00052 42_[+4]_70 chr3R:25851307-25851427 0.00052 100_[+4]_12 chr3R:29202573-29202693 0.00052 76_[+4]_36 chr2R:15682669-15682789 0.00052 72_[+4]_40 chr2R:18613047-18613167 0.00061 91_[+4]_21 chr3R:16614429-16614549 0.00061 55_[+4]_57 chr2L:2979219-2979339 0.00061 99_[+4]_13 chr3R:5821363-5821483 0.00061 78_[+4]_34 chr3R:9679897-9680017 0.0007 8_[+4]_104 chr2R:8952312-8952432 0.0007 53_[+4]_59 chr3L:13389995-13390115 0.0007 94_[+4]_18 chr2L:6677559-6677679 0.0007 46_[+4]_66 chr2L:10056811-10056931 0.0007 20_[+4]_92 chr3L:1756257-1756377 0.0007 10_[+4]_102 chr2L:19498150-19498270 0.0007 43_[+4]_69 chr2R:21720365-21720485 0.0007 69_[+4]_43 chr2L:16738352-16738472 0.00077 1_[+4]_111 chr3R:5219548-5219668 0.00077 65_[+4]_47 chr3L:14942912-14943032 0.00085 97_[+4]_15 chrX:19616085-19616205 0.00085 29_[+4]_83 chr3R:13088526-13088646 0.00085 53_[+4]_59 chr3R:24130215-24130335 0.00085 112_[+4] chr3R:18200125-18200245 0.00085 65_[+4]_47 chr3L:22773439-22773559 0.00085 65_[+4]_47 chr2R:15568852-15568972 0.00085 55_[+4]_57 chrX:3175069-3175189 0.00085 81_[+4]_31 chr3R:18572977-18573097 0.00085 12_[+4]_100 chr2R:22924719-22924839 0.00091 48_[+4]_64 chrX:13612065-13612185 0.00091 69_[+4]_43 chr2R:6807564-6807684 0.00091 14_[+4]_98 chr3R:5464654-5464774 0.00091 48_[+4]_64 chrX:1695888-1696008 0.00095 98_[+4]_14 chr3L:13502600-13502720 0.00095 9_[+4]_103 chrX:18515306-18515426 0.00098 69_[+4]_43 chr3R:8805564-8805684 0.00099 95_[+4]_17 chr3L:1329889-1330009 0.0011 84_[+4]_28 chr2L:6919265-6919385 0.0011 109_[+4]_3 chr3L:16595261-16595381 0.0011 28_[+4]_84 chrX:8243299-8243419 0.0011 52_[+4]_60 chr2R:15573824-15573944 0.0012 87_[+4]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCGCAVHN width=8 seqs=112 chr2L:114574-114694 ( 105) GCGCAGAG 1 chr2R:23357387-23357507 ( 44) GCGCAGAG 1 chr3L:8449331-8449451 ( 85) GCGCAGAG 1 chr3R:13958724-13958844 ( 66) GCGCAGAG 1 chr2R:18128370-18128490 ( 113) GCGCAGAG 1 chr3R:14890166-14890286 ( 78) GCGCAGCG 1 chr3L:4103483-4103603 ( 80) GCGCAGAC 1 chr2L:3530359-3530479 ( 60) GCGCAGAC 1 chrX:18385231-18385351 ( 33) GCGCAGTG 1 chrX:12897302-12897422 ( 20) GCGCAGCC 1 chr3R:27283706-27283826 ( 69) GCGCAGTG 1 chr2L:5096336-5096456 ( 18) GCGCAGTG 1 chr2R:10886714-10886834 ( 44) GCGCAGTC 1 chr3L:20816038-20816158 ( 48) GCGCAAAG 1 chrX:15475385-15475505 ( 99) GCGCAAAG 1 chr3L:13412716-13412836 ( 57) GCGCAAAG 1 chrX:1900582-1900702 ( 35) GCGCAGAA 1 chrX:18137074-18137194 ( 50) GCGCAGTC 1 chr2L:4386015-4386135 ( 82) GCGCAGTC 1 chrX:11137025-11137145 ( 48) GCGCAAAC 1 chr3L:21626203-21626323 ( 39) GCGCAGAT 1 chr2L:11178972-11179092 ( 4) GCGCAACG 1 chr3L:20361532-20361652 ( 39) GCGCAAAC 1 chr2R:24402344-24402464 ( 6) GCGCAAAC 1 chrX:16325569-16325689 ( 51) GCGCAACG 1 chr2R:8170206-8170326 ( 25) GCGCAAAC 1 chrX:22473610-22473730 ( 69) GCGCAGCA 1 chrX:19623070-19623190 ( 35) GCGCAATG 1 chrX:20162730-20162850 ( 2) GCGCAATG 1 chr3R:15206395-15206515 ( 90) GCGCAGCT 1 chrX:15701164-15701284 ( 66) GCGCAGCT 1 chr2R:23553975-23554095 ( 6) GCGCAGTA 1 chr3L:1318346-1318466 ( 87) GCGCACAG 1 chr2L:1732296-1732416 ( 80) GCGCACAG 1 chrX:8273334-8273454 ( 33) GCGCAGTA 1 chr2R:23865345-23865465 ( 10) GCGCAAAA 1 chr3R:20621872-20621992 ( 93) GCGCACCG 1 chr3L:6550596-6550716 ( 78) GCGCACCG 1 chr3L:12794655-12794775 ( 93) GCGCAGTT 1 chr2R:23693903-23694023 ( 69) GCGCAAAA 1 chr3L:5565138-5565258 ( 33) GCGCAATC 1 chr2R:16240690-16240810 ( 2) GCGCAAAA 1 chr2L:4818193-4818313 ( 61) GCGCAAAA 1 chr2L:3171075-3171195 ( 79) GCGCAAAA 1 chrX:18499883-18500003 ( 96) GCGCAAAT 1 chrX:3965251-3965371 ( 66) GCGCAACA 1 chr2R:14503849-14503969 ( 85) GCGCAAAT 1 chr2R:23355107-23355227 ( 28) GCGCAACA 1 chr3L:8634035-8634155 ( 20) GCGCAAAT 1 chr2L:3172751-3172871 ( 65) GCGCAACA 1 chr3R:20816164-20816284 ( 87) GCGCAATA 1 chr2R:10429610-10429730 ( 45) GCGCACTC 1 chrX:13811577-13811697 ( 59) GCGCACAA 1 chr2L:3144853-3144973 ( 39) GCGCACCA 1 chr2R:13168366-13168486 ( 96) GCGCACAT 1 chr3L:9359096-9359216 ( 60) GCGCCGAG 1 chr2R:6636008-6636128 ( 38) GCGCACAT 1 chrX:3880636-3880756 ( 19) GCGCGGAG 1 chr2R:10821575-10821695 ( 17) GCGCACTA 1 chrX:15328266-15328386 ( 36) GCGCGGCG 1 chrX:18647532-18647652 ( 93) GCGCGGCG 1 chr3L:17051179-17051299 ( 79) GCGCACCT 1 chrX:19201753-19201873 ( 66) GCGCGGCC 1 chr2R:11150056-11150176 ( 67) GCGCAGGG 1 chrX:940800-940920 ( 31) GCGCCGCC 1 chr3R:23927609-23927729 ( 41) GCGCAGGG 1 chr2L:18943932-18944052 ( 79) GCGCACTT 1 chr2R:13846273-13846393 ( 63) GCGCGGCC 1 chrX:7074475-7074595 ( 21) GCGCACTT 1 chr3R:24805233-24805353 ( 60) GCGCGGTC 1 chrX:2738757-2738877 ( 31) GCGCGAAG 1 chrX:16637338-16637458 ( 78) GCGCCGAT 1 chr2R:24574450-24574570 ( 43) GCGCCGCA 1 chr3R:25851307-25851427 ( 101) GCGCCAAC 1 chr3R:29202573-29202693 ( 77) GCGCGGCA 1 chr2R:15682669-15682789 ( 73) GCGCCGCA 1 chr2R:18613047-18613167 ( 92) GCGCCACC 1 chr3R:16614429-16614549 ( 56) GCGCGATG 1 chr2L:2979219-2979339 ( 100) GCGCCGTA 1 chr3R:5821363-5821483 ( 79) GCGCCGCT 1 chr3R:9679897-9680017 ( 9) GCGCCCAC 1 chr2R:8952312-8952432 ( 54) GCGCGGTT 1 chr3L:13389995-13390115 ( 95) GCGCCATC 1 chr2L:6677559-6677679 ( 47) GCGCGCCG 1 chr2L:10056811-10056931 ( 21) GCGCCGTT 1 chr3L:1756257-1756377 ( 11) GCGCCAAA 1 chr2L:19498150-19498270 ( 44) GCGCGATC 1 chr2R:21720365-21720485 ( 70) GCGCCGTT 1 chr2L:16738352-16738472 ( 2) GCGCCAAT 1 chr3R:5219548-5219668 ( 66) GCGCACGG 1 chr3L:14942912-14943032 ( 98) GCGCCACT 1 chrX:19616085-19616205 ( 30) GCGCCCAA 1 chr3R:13088526-13088646 ( 54) GCGCCACT 1 chr3R:24130215-24130335 ( 113) GCGCAAGA 1 chr3R:18200125-18200245 ( 66) GCGCAAGA 1 chr3L:22773439-22773559 ( 66) GCGCCCTC 1 chr2R:15568852-15568972 ( 56) GCGCACGC 1 chrX:3175069-3175189 ( 82) GCGCCCAA 1 chr3R:18572977-18573097 ( 13) GCGCGCTC 1 chr2R:22924719-22924839 ( 49) GCGCGCCA 1 chrX:13612065-13612185 ( 70) GCGCCATT 1 chr2R:6807564-6807684 ( 15) GCGCGCAT 1 chr3R:5464654-5464774 ( 49) GCGCGATT 1 chrX:1695888-1696008 ( 99) GCGCGCTA 1 chr3L:13502600-13502720 ( 10) GCGCGCCT 1 chrX:18515306-18515426 ( 70) GCGCACGT 1 chr3R:8805564-8805684 ( 96) GCGCGGGC 1 chr3L:1329889-1330009 ( 85) GCGCATAC 1 chr2L:6919265-6919385 ( 110) GCGCATAC 1 chr3L:16595261-16595381 ( 29) GCGCGAGA 1 chrX:8243299-8243419 ( 53) GCGCATTG 1 chr2R:15573824-15573944 ( 88) GCGCATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.1998 E= 7.7e-013 -1345 -1345 223 -1345 -1345 220 -1345 -1345 -1345 -1345 223 -1345 -1345 220 -1345 -1345 114 -21 -26 -1345 27 10 85 -297 41 25 -141 -2 -16 15 37 -33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 112 E= 7.7e-013 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.633929 0.187500 0.178571 0.000000 0.348214 0.232143 0.383929 0.035714 0.383929 0.258929 0.080357 0.276786 0.258929 0.241071 0.276786 0.223214 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCGCAVHN MEME-4 regular expression -------------------------------------------------------------------------------- GCGCA[GAC][ATC][GACT] -------------------------------------------------------------------------------- Time 25.59 secs. ******************************************************************************** ******************************************************************************** MOTIF AACAGCWS MEME-5 width = 8 sites = 53 llr = 441 E-value = 9.3e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 Description -------------------------------------------------------------------------------- Simplified A a7:a::51 pos.-specific C :1a::a:4 probability G :2::a::5 matrix T :1::::51 bits 2.2 * ** 2.0 * ** 1.8 * **** 1.6 * **** Relative 1.3 * **** Entropy 1.1 * **** (12.0 bits) 0.9 * **** 0.7 * ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AACAGCTG consensus AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:24574450-24574570 112 1.45e-05 CGGCACACTA AACAGCTG A chr3R:24130215-24130335 22 1.45e-05 GTTGCGCCAA AACAGCTG ATGTTGTTTT chr3R:14259959-14260079 30 1.45e-05 TATAACATTG AACAGCTG TGCCACCAGT chr3L:12794655-12794775 74 1.45e-05 CTGAAGCCAA AACAGCTG TGTTTGCCAT chr2R:23693903-23694023 88 1.45e-05 AAGAAGTGAA AACAGCTG ACAGCAGCAG chr3R:14890166-14890286 51 1.45e-05 ATTTTCCACG AACAGCTG ACTGGCCGCA chr3L:16587027-16587147 40 1.45e-05 ATAGCCGAGC AACAGCTG ATGGCTGGTA chr3L:8634035-8634155 51 1.45e-05 CGCCACGAGC AACAGCTG ATCAAGCCTG chr2L:2979219-2979339 60 1.45e-05 CGAAGTTCGA AACAGCTG AGCCGCAGAT chr2L:4818193-4818313 19 1.45e-05 AAATTAAATA AACAGCTG ATGGACTCAA chr3R:21359748-21359868 25 2.93e-05 ATGGCGTGCC AACAGCAG CACAAGCAGT chr2R:23355107-23355227 6 4.40e-05 CAACT AACAGCTC TGTTAGCCCG chr3L:9358894-9359014 57 4.40e-05 TGTTGCGTCC AACAGCTC AGAAATGTAG chrX:13811577-13811697 45 4.40e-05 GTTAACCGCT AACAGCTC ACTGTGGCGC chr3R:24585163-24585283 46 5.90e-05 GGCTGCGCTT AACAGCAC GCAGTTAACA chr2L:6919265-6919385 47 5.90e-05 CATTGCGCAT AACAGCAC GCTGTTAGTT chr3L:13502600-13502720 18 5.90e-05 GCGCGCGCCT AACAGCAC ACAGTGCATG chr3L:22773439-22773559 41 5.90e-05 CTTGCGTCGC AACAGCAC ACACAGTGCT chr2R:22415740-22415860 60 5.90e-05 ATTGGCAGCG AACAGCAC GCTGCAGAAG chr2R:15568852-15568972 31 5.90e-05 GCATTTGGAT AACAGCAC CGCAACGCCG chrX:8273334-8273454 15 5.90e-05 TGTTAACGCT AACAGCAC TGTAACAGAA chr3R:17719361-17719481 39 5.90e-05 TACTGACATT AACAGCAC ACGTACGAGA chr2R:15680075-15680195 42 5.90e-05 GAAGGCGCCT AACAGCAC CGCATTGGTA chrX:17886272-17886392 23 5.90e-05 GTTAACGCCT AACAGCAC GCTGTATATT chr3L:18820704-18820824 36 5.90e-05 TTTCGCGTCC AACAGCAC GCTGAGTGCT chr3R:23996323-23996443 55 5.90e-05 GTAAACGGTG AACAGCAC ACTGTTGTCT chr2R:15571369-15571489 34 5.90e-05 TCGTGCGCCT AACAGCAC ACTGTTATTC chr3R:15268586-15268706 68 6.98e-05 TTCGCACGAA AGCAGCTG CACACACTTC chr2R:18614975-18615095 70 6.98e-05 ATCGATTATT AGCAGCTG CGTCGGCTCA chr3L:21335106-21335226 14 6.98e-05 AACAGTTGTT AGCAGCTG CTAACTCACA chr3R:8806221-8806341 69 6.98e-05 AGTGCTGTTA AGCAGCTG CCCGTGGTGC chrX:8243299-8243419 11 8.08e-05 TCGTTCGGAC AGCAGCAG TGTTACCAAC chrX:15697356-15697476 106 1.06e-04 GCACTGCCGG ATCAGCTG ACTGACT chr3R:13088526-13088646 100 1.06e-04 AAAGCGATCG ATCAGCTG CTCTGCACAG chr3L:20361532-20361652 61 1.06e-04 GATGGCAAAT ATCAGCTG TGTCAGTTGT chrX:2180997-2181117 35 1.06e-04 GCTAAATGGG ATCAGCTG AAAGCACAGA chrX:12903478-12903598 63 1.06e-04 CTATCGGTGC ATCAGCTG TGCGCTGAAT chrX:22473610-22473730 95 1.06e-04 ACGCTGTTAA ATCAGCTG CTGGCAATAT chr2R:24402344-24402464 108 1.17e-04 GCCAGAAGAG AGCAGCAC TATTT chr3R:19229367-19229487 59 1.17e-04 TTTGCTTCGT AGCAGCAC TAAGTATTTT chr2R:15682669-15682789 65 1.17e-04 TCAAGCAAGA AGCAGCAC GCGCCGCAGA chr2L:16738352-16738472 24 1.31e-04 ATAGGACGCT ATCAGCAG TGTGACCGTC chrX:3862683-3862803 111 1.80e-04 CATTGCACAT AACAGCTA AC chr3R:15328196-15328316 44 1.91e-04 TTAACTTATC ACCAGCTG CGACGTACCG chr2L:19580310-19580430 65 2.11e-04 ATTTCGCTGG AACAGCAA CCAGCTGGAG chr2L:10056811-10056931 39 2.11e-04 GTCCGAAGTT AACAGCAA GATAACATGC chr3R:8807132-8807252 113 2.11e-04 AAATTCGTTT AACAGCAA chr3L:1329889-1330009 69 2.41e-04 TAAGTTGAGA AACAGCTT AGTACATTGC chrX:18499883-18500003 31 2.41e-04 TAAATTAGGC ACCAGCAG CGATAGGCGG chrX:4938071-4938191 45 2.41e-04 GTTAGCTCCT AACAGCTT CGGCAATTTA chrX:7066787-7066907 59 2.52e-04 ACTCACTGTT ACCAGCTC TGTTAAGTGT chr3L:6550596-6550716 49 2.72e-04 ACAGTGACAT AACAGCAT GGTAATCGAT chr2L:9893356-9893476 32 2.94e-04 ATTTATACGC AACAGCGG TTTGATTAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:24574450-24574570 1.4e-05 111_[+5]_1 chr3R:24130215-24130335 1.4e-05 21_[+5]_91 chr3R:14259959-14260079 1.4e-05 29_[+5]_83 chr3L:12794655-12794775 1.4e-05 73_[+5]_39 chr2R:23693903-23694023 1.4e-05 87_[+5]_25 chr3R:14890166-14890286 1.4e-05 50_[+5]_62 chr3L:16587027-16587147 1.4e-05 39_[+5]_73 chr3L:8634035-8634155 1.4e-05 50_[+5]_62 chr2L:2979219-2979339 1.4e-05 59_[+5]_53 chr2L:4818193-4818313 1.4e-05 18_[+5]_94 chr3R:21359748-21359868 2.9e-05 24_[+5]_88 chr2R:23355107-23355227 4.4e-05 5_[+5]_107 chr3L:9358894-9359014 4.4e-05 56_[+5]_56 chrX:13811577-13811697 4.4e-05 44_[+5]_68 chr3R:24585163-24585283 5.9e-05 45_[+5]_67 chr2L:6919265-6919385 5.9e-05 46_[+5]_66 chr3L:13502600-13502720 5.9e-05 17_[+5]_95 chr3L:22773439-22773559 5.9e-05 40_[+5]_72 chr2R:22415740-22415860 5.9e-05 59_[+5]_53 chr2R:15568852-15568972 5.9e-05 30_[+5]_82 chrX:8273334-8273454 5.9e-05 14_[+5]_98 chr3R:17719361-17719481 5.9e-05 38_[+5]_74 chr2R:15680075-15680195 5.9e-05 41_[+5]_71 chrX:17886272-17886392 5.9e-05 22_[+5]_90 chr3L:18820704-18820824 5.9e-05 35_[+5]_77 chr3R:23996323-23996443 5.9e-05 54_[+5]_58 chr2R:15571369-15571489 5.9e-05 33_[+5]_79 chr3R:15268586-15268706 7e-05 67_[+5]_45 chr2R:18614975-18615095 7e-05 69_[+5]_43 chr3L:21335106-21335226 7e-05 13_[+5]_99 chr3R:8806221-8806341 7e-05 68_[+5]_44 chrX:8243299-8243419 8.1e-05 10_[+5]_102 chrX:15697356-15697476 0.00011 105_[+5]_7 chr3R:13088526-13088646 0.00011 99_[+5]_13 chr3L:20361532-20361652 0.00011 60_[+5]_52 chrX:2180997-2181117 0.00011 34_[+5]_78 chrX:12903478-12903598 0.00011 62_[+5]_50 chrX:22473610-22473730 0.00011 94_[+5]_18 chr2R:24402344-24402464 0.00012 107_[+5]_5 chr3R:19229367-19229487 0.00012 58_[+5]_54 chr2R:15682669-15682789 0.00012 64_[+5]_48 chr2L:16738352-16738472 0.00013 23_[+5]_89 chrX:3862683-3862803 0.00018 110_[+5]_2 chr3R:15328196-15328316 0.00019 43_[+5]_69 chr2L:19580310-19580430 0.00021 64_[+5]_48 chr2L:10056811-10056931 0.00021 38_[+5]_74 chr3R:8807132-8807252 0.00021 112_[+5] chr3L:1329889-1330009 0.00024 68_[+5]_44 chrX:18499883-18500003 0.00024 30_[+5]_82 chrX:4938071-4938191 0.00024 44_[+5]_68 chrX:7066787-7066907 0.00025 58_[+5]_54 chr3L:6550596-6550716 0.00027 48_[+5]_64 chr2L:9893356-9893476 0.00029 31_[+5]_81 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AACAGCWS width=8 seqs=53 chr2R:24574450-24574570 ( 112) AACAGCTG 1 chr3R:24130215-24130335 ( 22) AACAGCTG 1 chr3R:14259959-14260079 ( 30) AACAGCTG 1 chr3L:12794655-12794775 ( 74) AACAGCTG 1 chr2R:23693903-23694023 ( 88) AACAGCTG 1 chr3R:14890166-14890286 ( 51) AACAGCTG 1 chr3L:16587027-16587147 ( 40) AACAGCTG 1 chr3L:8634035-8634155 ( 51) AACAGCTG 1 chr2L:2979219-2979339 ( 60) AACAGCTG 1 chr2L:4818193-4818313 ( 19) AACAGCTG 1 chr3R:21359748-21359868 ( 25) AACAGCAG 1 chr2R:23355107-23355227 ( 6) AACAGCTC 1 chr3L:9358894-9359014 ( 57) AACAGCTC 1 chrX:13811577-13811697 ( 45) AACAGCTC 1 chr3R:24585163-24585283 ( 46) AACAGCAC 1 chr2L:6919265-6919385 ( 47) AACAGCAC 1 chr3L:13502600-13502720 ( 18) AACAGCAC 1 chr3L:22773439-22773559 ( 41) AACAGCAC 1 chr2R:22415740-22415860 ( 60) AACAGCAC 1 chr2R:15568852-15568972 ( 31) AACAGCAC 1 chrX:8273334-8273454 ( 15) AACAGCAC 1 chr3R:17719361-17719481 ( 39) AACAGCAC 1 chr2R:15680075-15680195 ( 42) AACAGCAC 1 chrX:17886272-17886392 ( 23) AACAGCAC 1 chr3L:18820704-18820824 ( 36) AACAGCAC 1 chr3R:23996323-23996443 ( 55) AACAGCAC 1 chr2R:15571369-15571489 ( 34) AACAGCAC 1 chr3R:15268586-15268706 ( 68) AGCAGCTG 1 chr2R:18614975-18615095 ( 70) AGCAGCTG 1 chr3L:21335106-21335226 ( 14) AGCAGCTG 1 chr3R:8806221-8806341 ( 69) AGCAGCTG 1 chrX:8243299-8243419 ( 11) AGCAGCAG 1 chrX:15697356-15697476 ( 106) ATCAGCTG 1 chr3R:13088526-13088646 ( 100) ATCAGCTG 1 chr3L:20361532-20361652 ( 61) ATCAGCTG 1 chrX:2180997-2181117 ( 35) ATCAGCTG 1 chrX:12903478-12903598 ( 63) ATCAGCTG 1 chrX:22473610-22473730 ( 95) ATCAGCTG 1 chr2R:24402344-24402464 ( 108) AGCAGCAC 1 chr3R:19229367-19229487 ( 59) AGCAGCAC 1 chr2R:15682669-15682789 ( 65) AGCAGCAC 1 chr2L:16738352-16738472 ( 24) ATCAGCAG 1 chrX:3862683-3862803 ( 111) AACAGCTA 1 chr3R:15328196-15328316 ( 44) ACCAGCTG 1 chr2L:19580310-19580430 ( 65) AACAGCAA 1 chr2L:10056811-10056931 ( 39) AACAGCAA 1 chr3R:8807132-8807252 ( 113) AACAGCAA 1 chr3L:1329889-1330009 ( 69) AACAGCTT 1 chrX:18499883-18500003 ( 31) ACCAGCAG 1 chrX:4938071-4938191 ( 45) AACAGCTT 1 chrX:7066787-7066907 ( 59) ACCAGCTC 1 chr3L:6550596-6550716 ( 49) AACAGCAT 1 chr2L:9893356-9893476 ( 32) AACAGCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.6062 E= 9.3e-010 179 -1237 -1237 -1237 119 -194 -50 -109 -1237 220 -1237 -1237 179 -1237 -1237 -1237 -1237 -1237 223 -1237 -1237 220 -1237 -1237 65 -1237 -350 91 -193 80 120 -231 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 53 E= 9.3e-010 1.000000 0.000000 0.000000 0.000000 0.660377 0.056604 0.150943 0.132075 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.452830 0.000000 0.018868 0.528302 0.075472 0.377358 0.490566 0.056604 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACAGCWS MEME-5 regular expression -------------------------------------------------------------------------------- AACAGC[TA][GC] -------------------------------------------------------------------------------- Time 31.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:22473610-22473730 1.74e-04 58_[+2(1.33e-05)]_54 chr2L:11004430-11004550 2.90e-01 120 chr2R:15571369-15571489 2.33e-02 33_[+5(5.90e-05)]_79 chrX:2738757-2738877 6.45e-03 20_[+2(1.33e-05)]_92 chr3R:18572977-18573097 2.43e-03 120 chrX:7074475-7074595 2.18e-01 120 chr3R:8806221-8806341 3.16e-04 59_[+2(1.33e-05)]_1_[+5(6.98e-05)]_\ 6_[+2(1.33e-05)]_30 chrX:3175069-3175189 1.48e-03 87_[+5(5.90e-05)]_25 chr3R:23996323-23996443 3.19e-02 34_[+5(5.90e-05)]_12_[+5(5.90e-05)]_\ 58 chrX:4938071-4938191 8.71e-05 60_[+1(7.39e-05)]_1_[+2(1.33e-05)]_\ 43 chr2L:3171075-3171195 1.92e-02 68_[+2(8.45e-05)]_44 chrX:22472012-22472132 6.66e-01 120 chr2L:5271264-5271384 1.03e-01 120 chr2L:4386015-4386135 4.96e-06 52_[+2(2.67e-05)]_21_[+4(6.71e-05)]_\ 16_[+1(2.46e-05)]_7 chr3L:18820704-18820824 7.10e-04 35_[+5(5.90e-05)]_5_[+2(1.33e-05)]_\ 5_[+5(6.98e-05)]_51 chr2L:3530359-3530479 2.21e-03 49_[+2(6.42e-05)]_2_[+4(2.27e-05)]_\ 53 chr2L:3530570-3530690 5.22e-01 120 chrX:9192577-9192697 2.46e-01 120 chr2R:21720365-21720485 7.81e-03 59_[+2(1.33e-05)]_53 chrX:3880636-3880756 1.08e-03 49_[+2(1.33e-05)]_63 chrX:17886272-17886392 7.19e-02 22_[+5(5.90e-05)]_90 chr2R:20262822-20262942 6.38e-02 80_[+1(2.46e-05)]_32 chr2R:15682669-15682789 8.30e-05 40_[+3(1.09e-05)]_72 chr3R:8805564-8805684 1.22e-01 120 chr2L:3171283-3171403 5.66e-01 120 chr2R:21025018-21025138 1.64e-03 90_[+5(1.45e-05)]_22 chr2R:13846273-13846393 2.19e-03 52_[+2(1.33e-05)]_60 chrX:13811577-13811697 9.38e-04 44_[+5(4.40e-05)]_68 chr3R:29202573-29202693 8.89e-03 60_[+1(2.46e-05)]_52 chr2R:15680075-15680195 1.75e-02 41_[+5(5.90e-05)]_71 chr3R:23924303-23924423 1.42e-03 64_[+1(7.39e-05)]_25_[+3(1.09e-05)]_\ 15 chr3R:17719361-17719481 8.24e-02 38_[+5(5.90e-05)]_74 chr3R:5821363-5821483 3.39e-02 120 chr3R:21359748-21359868 1.25e-04 24_[+5(2.93e-05)]_8_[+2(1.33e-05)]_\ 72 chrX:18137074-18137194 3.22e-03 49_[+4(6.71e-05)]_28_[+3(1.09e-05)]_\ 27 chr3R:8807132-8807252 2.29e-01 120 chr2R:21292163-21292283 6.83e-01 120 chr3R:21359951-21360071 2.37e-01 120 chrX:17852632-17852752 1.11e-02 82_[+1(2.46e-05)]_30 chr2L:11004765-11004885 1.24e-02 57_[+3(3.38e-05)]_55 chr2L:12097784-12097904 4.33e-03 72_[+3(1.09e-05)]_40 chr2L:4382666-4382786 2.39e-02 105_[+1(2.46e-05)]_7 chrX:8273334-8273454 1.44e-05 14_[+5(5.90e-05)]_35_[+1(7.39e-05)]_\ 40_[+1(2.46e-05)]_7 chr2R:15568852-15568972 2.68e-02 30_[+5(5.90e-05)]_82 chr3R:7530365-7530485 8.58e-01 120 chr2L:1732296-1732416 1.15e-04 52_[+2(5.41e-05)]_25_[+5(9.17e-05)]_\ 16_[+2(2.67e-05)]_3 chr2R:8170206-8170326 3.39e-02 36_[+3(6.77e-05)]_76 chr3L:17051179-17051299 1.48e-02 120 chr2R:22415740-22415860 8.83e-02 36_[+5(5.90e-05)]_15_[+5(5.90e-05)]_\ 53 chrX:15760720-15760840 3.68e-02 13_[+2(1.33e-05)]_99 chrX:1900582-1900702 1.45e-02 34_[+4(6.71e-05)]_78 chr3R:24805233-24805353 1.57e-01 120 chr2R:18128370-18128490 2.38e-04 36_[+1(7.39e-05)]_68_[+4(8.19e-06)] chrX:496411-496531 1.10e-01 120 chr3L:21335106-21335226 9.05e-05 13_[+5(6.98e-05)]_19_[+2(2.67e-05)]_\ 72 chrX:16325569-16325689 5.30e-02 120 chrX:18647532-18647652 9.57e-02 120 chr2L:18943932-18944052 1.16e-02 47_[+1(7.39e-05)]_10_[+1(2.46e-05)]_\ 47 chr3L:9358894-9359014 6.11e-03 42_[+2(5.41e-05)]_6_[+5(4.40e-05)]_\ 13_[+5(5.90e-05)]_35 chr2L:5096336-5096456 4.16e-04 17_[+4(3.69e-05)]_7_[+2(5.41e-05)]_\ 80 chrX:8243299-8243419 2.20e-04 10_[+5(8.08e-05)]_21_[+1(2.46e-05)]_\ 73 chr3L:13412716-13412836 5.15e-03 56_[+4(6.71e-05)]_56 chr2L:19498150-19498270 1.96e-01 120 chr3L:1318346-1318466 9.47e-04 120 chrX:12903478-12903598 2.05e-03 81_[+1(7.39e-05)]_31 chr3L:1756257-1756377 1.71e-01 120 chr3L:1777392-1777512 7.16e-04 44_[+2(5.41e-05)]_68 chrX:10899387-10899507 2.06e-01 120 chr2L:10056811-10056931 4.13e-04 120 chr3R:27283706-27283826 2.71e-03 43_[+1(7.39e-05)]_17_[+4(3.69e-05)]_\ 44 chr2L:21677623-21677743 2.44e-01 120 chr3L:22773439-22773559 5.43e-04 40_[+5(5.90e-05)]_5_[+2(1.33e-05)]_\ 59 chr2L:4818193-4818313 1.94e-05 18_[+5(1.45e-05)]_75_[+3(1.09e-05)]_\ 11 chr2R:22492126-22492246 1.75e-02 31_[+1(2.46e-05)]_7_[+1(7.39e-05)]_\ 66 chr3R:23927609-23927729 5.50e-02 120 chr2R:23553975-23554095 1.20e-02 106_[+3(5.31e-05)]_6 chr3R:7530574-7530694 8.77e-01 120 chr2L:2979219-2979339 9.99e-03 59_[+5(1.45e-05)]_53 chrX:2727623-2727743 1.90e-01 120 chr2R:16240690-16240810 6.72e-02 120 chrX:15762866-15762986 1.77e-04 48_[+3(1.09e-05)]_10_[+1(2.46e-05)]_\ 38_[+3(1.09e-05)] chrX:940800-940920 2.03e-03 66_[+2(5.41e-05)]_46 chrX:7066787-7066907 4.37e-03 120 chr2L:4387102-4387222 1.14e-01 120 chr2L:3172751-3172871 1.18e-02 120 chr3L:9836756-9836876 6.12e-03 35_[+3(4.50e-05)]_25_[+1(7.39e-05)]_\ 44 chrX:15328266-15328386 9.13e-03 23_[+1(2.46e-05)]_89 chr3L:20393485-20393605 5.30e-02 67_[+1(7.39e-05)]_45 chr3L:4103483-4103603 9.26e-05 79_[+4(2.27e-05)]_19_[+2(7.44e-05)]_\ 6 chr3R:13958724-13958844 4.89e-03 65_[+4(8.19e-06)]_47 chrX:18380015-18380135 4.05e-02 87_[+3(1.09e-05)]_25 chrX:15475385-15475505 5.19e-03 78_[+1(2.46e-05)]_12_[+4(6.71e-05)]_\ 14 chr3L:8634035-8634155 3.78e-04 50_[+5(1.45e-05)]_62 chrX:10595880-10596000 6.13e-01 120 chr2R:12514736-12514856 9.33e-01 120 chr3L:16587027-16587147 4.28e-04 39_[+5(1.45e-05)]_73 chr2R:23355107-23355227 9.77e-03 5_[+5(4.40e-05)]_107 chr3L:5565138-5565258 2.24e-06 71_[+3(1.09e-05)]_23_[+1(2.46e-05)]_\ 10 chr3R:14890166-14890286 1.33e-04 50_[+5(1.45e-05)]_19_[+4(2.27e-05)]_\ 35 chr2R:7635494-7635614 1.61e-01 120 chr2R:14618088-14618208 3.62e-01 120 chr3R:5464654-5464774 7.15e-02 120 chr2R:10821575-10821695 1.77e-03 37_[+1(2.46e-05)]_75 chr3R:12995612-12995732 1.23e-02 1_[+1(7.39e-05)]_5_[+1(2.46e-05)]_\ 98 chr2R:23693903-23694023 1.57e-04 31_[+1(2.46e-05)]_48_[+5(1.45e-05)]_\ 2_[+5(8.08e-05)]_15 chr3R:29138586-29138706 5.82e-01 120 chrX:6824251-6824371 7.58e-01 120 chr3L:12794655-12794775 1.98e-05 45_[+1(2.46e-05)]_20_[+5(1.45e-05)]_\ 39 chr3R:14259959-14260079 1.22e-02 29_[+5(1.45e-05)]_83 chr3R:5374941-5375061 3.39e-03 90_[+3(3.38e-05)]_22 chr2L:8449515-8449635 7.23e-04 38_[+5(1.45e-05)]_74 chr3L:13502600-13502720 2.67e-03 17_[+5(5.90e-05)]_95 chr3L:20006341-20006461 5.29e-02 120 chrX:11868954-11869074 9.73e-01 120 chrX:15701164-15701284 1.54e-02 120 chr3R:15206395-15206515 2.64e-03 101_[+1(2.46e-05)]_11 chr3L:15816373-15816493 9.38e-02 58_[+1(2.46e-05)]_54 chrX:2180997-2181117 1.31e-01 120 chrX:12897302-12897422 3.54e-02 19_[+4(3.69e-05)]_93 chrX:15760966-15761086 5.73e-01 120 chr3R:5463328-5463448 3.92e-03 49_[+3(6.77e-05)]_47_[+2(5.41e-05)]_\ 8 chrX:3723030-3723150 5.69e-03 40_[+1(2.46e-05)]_72 chrX:3862683-3862803 5.65e-02 120 chr2R:18614975-18615095 2.35e-02 69_[+5(6.98e-05)]_43 chr2R:14503849-14503969 5.49e-03 46_[+1(7.39e-05)]_66 chr2L:544656-544776 9.64e-02 58_[+3(5.31e-05)]_54 chr3R:15320686-15320806 1.01e-01 103_[+3(1.09e-05)]_9 chr2R:16001612-16001732 7.87e-01 120 chr3R:19229367-19229487 3.86e-03 120 chrX:15996964-15997084 5.01e-02 69_[+3(1.93e-05)]_4_[+3(4.50e-05)]_\ 31 chrX:9162097-9162217 5.68e-01 120 chr2R:24402344-24402464 1.02e-02 120 chr3L:6550596-6550716 1.70e-04 89_[+1(7.39e-05)]_23 chr2R:8106297-8106417 7.00e-04 34_[+1(7.39e-05)]_20_[+1(2.46e-05)]_\ 50 chrX:20162730-20162850 9.29e-04 103_[+2(2.67e-05)]_9 chr2R:6715979-6716099 3.50e-02 101_[+1(2.46e-05)]_11 chr3L:3937974-3938094 6.94e-02 36_[+1(2.46e-05)]_17_[+1(2.46e-05)]_\ 51 chr3L:21343676-21343796 3.54e-02 120 chr3R:5516688-5516808 6.19e-01 120 chr3R:24530523-24530643 3.21e-02 120 chr2L:6919265-6919385 4.62e-02 27_[+5(5.90e-05)]_11_[+5(5.90e-05)]_\ 66 chr2R:16017033-16017153 9.74e-01 120 chr3R:18200125-18200245 4.85e-01 120 chrX:19193425-19193545 6.40e-02 43_[+1(2.46e-05)]_69 chr3R:27954025-27954145 2.46e-02 105_[+3(6.77e-05)]_7 chr2L:19580310-19580430 8.65e-03 120 chr2R:10429610-10429730 1.85e-03 28_[+1(7.39e-05)]_41_[+1(2.46e-05)]_\ 35 chr2R:6636008-6636128 3.33e-02 120 chr2L:9893356-9893476 2.40e-03 72_[+1(2.46e-05)]_40 chr3L:8449331-8449451 2.51e-03 84_[+4(8.19e-06)]_28 chr3L:9359096-9359216 2.84e-01 120 chr3L:7243912-7244032 1.20e-01 57_[+3(3.38e-05)]_55 chr3R:15268586-15268706 6.39e-02 67_[+5(6.98e-05)]_45 chr3R:20552237-20552357 3.69e-02 120 chr3R:15328196-15328316 1.07e-01 120 chr3L:16595261-16595381 1.37e-01 120 chr3R:24130215-24130335 8.00e-04 21_[+5(1.45e-05)]_91 chr3R:25851307-25851427 2.40e-04 40_[+2(1.33e-05)]_13_[+2(8.45e-05)]_\ 51 chr3L:20361532-20361652 1.67e-04 78_[+1(2.46e-05)]_34 chr2L:6677559-6677679 1.86e-03 93_[+3(1.09e-05)]_19 chrX:2249889-2250009 7.43e-02 96_[+1(2.46e-05)]_16 chr2R:6214097-6214217 1.13e-03 96_[+2(1.33e-05)]_16 chrX:1695888-1696008 8.11e-04 73_[+1(2.46e-05)]_39 chrX:17886472-17886592 4.48e-02 27_[+2(2.67e-05)]_85 chr2L:8686055-8686175 6.12e-01 120 chr2R:12145653-12145773 2.63e-03 7_[+1(2.46e-05)]_69_[+3(7.83e-05)]_\ 28 chrX:19623070-19623190 1.05e-03 49_[+3(1.09e-05)]_63 chr2L:8740768-8740888 3.79e-01 120 chr2L:11178972-11179092 1.78e-02 120 chrX:2603966-2604086 6.03e-01 120 chr2R:13168366-13168486 1.92e-01 120 chrX:18830495-18830615 9.67e-03 80_[+1(7.39e-05)]_18_[+1(2.46e-05)]_\ 6 chr3R:25678821-25678941 5.74e-01 120 chr3R:25476904-25477024 1.40e-01 21_[+1(2.46e-05)]_27_[+1(2.46e-05)]_\ 56 chrX:21605224-21605344 4.49e-01 120 chrX:3173178-3173298 6.13e-01 120 chr2L:6717515-6717635 1.61e-03 55_[+3(1.09e-05)]_26_[+1(2.46e-05)]_\ 23 chr3L:20436153-20436273 7.01e-01 120 chrX:18385231-18385351 3.76e-04 32_[+4(3.69e-05)]_49_[+2(8.45e-05)]_\ 23 chr3R:5550608-5550728 1.80e-01 120 chr3R:20621872-20621992 6.86e-03 83_[+3(1.09e-05)]_29 chr3R:24585163-24585283 5.08e-04 26_[+2(1.33e-05)]_11_[+5(5.90e-05)]_\ 67 chrX:5622558-5622678 1.91e-02 4_[+3(8.65e-05)]_108 chr2R:6807564-6807684 4.66e-02 62_[+3(1.93e-05)]_50 chrX:20251172-20251292 8.46e-01 120 chr3L:13389995-13390115 8.73e-02 120 chr3R:30046706-30046826 3.15e-02 10_[+2(1.33e-05)]_102 chr2L:2580135-2580255 9.95e-01 120 chr2L:1728649-1728769 6.45e-01 120 chr3L:21626203-21626323 4.40e-03 2_[+1(2.46e-05)]_110 chr2R:24574450-24574570 3.55e-03 111_[+5(1.45e-05)]_1 chrX:3965251-3965371 4.75e-03 120 chr3R:20816164-20816284 1.10e-02 46_[+1(2.46e-05)]_66 chr3R:16614429-16614549 1.91e-01 120 chrX:13612065-13612185 6.20e-02 120 chrX:9103784-9103904 7.30e-01 120 chr2R:20278879-20278999 1.48e-02 44_[+2(8.45e-05)]_5_[+2(5.41e-05)]_\ 55 chrX:18499883-18500003 1.21e-02 120 chr3L:3472125-3472245 9.85e-01 120 chr3R:22745515-22745635 2.37e-01 120 chr2R:11452532-11452652 1.44e-01 7_[+1(7.39e-05)]_105 chr2L:4463494-4463614 6.97e-03 16_[+2(5.41e-05)]_96 chr3L:20816038-20816158 4.98e-03 30_[+1(2.46e-05)]_9_[+4(6.71e-05)]_\ 7_[+1(2.46e-05)]_50 chrX:941009-941129 4.11e-01 120 chr2R:18613047-18613167 4.13e-02 16_[+1(2.46e-05)]_96 chrX:11124806-11124926 3.46e-02 120 chr3R:20634676-20634796 8.54e-04 11_[+2(1.33e-05)]_68_[+1(2.46e-05)]_\ 25 chr3R:5219548-5219668 1.01e-01 120 chr3R:15485979-15486099 7.84e-03 8_[+3(4.50e-05)]_104 chr2R:11150056-11150176 1.06e-04 7_[+2(5.41e-05)]_10_[+1(7.39e-05)]_\ 21_[+1(7.39e-05)]_58 chr2R:23953946-23954066 4.62e-01 120 chr3R:26966884-26967004 4.13e-01 120 chr2R:23865345-23865465 1.64e-04 45_[+1(2.46e-05)]_30_[+3(7.83e-05)]_\ 29 chr2L:16738352-16738472 2.61e-02 120 chr2R:10886714-10886834 1.00e-02 43_[+4(6.71e-05)]_69 chr2L:10769938-10770058 3.82e-02 120 chrX:15320182-15320302 7.87e-01 120 chr2R:23357387-23357507 1.81e-04 31_[+3(6.77e-05)]_4_[+4(8.19e-06)]_\ 69 chrX:11891942-11892062 5.64e-02 120 chrX:9089379-9089499 1.42e-04 17_[+2(6.42e-05)]_86_[+1(2.46e-05)]_\ 1 chr3R:12401814-12401934 4.27e-03 35_[+2(5.41e-05)]_77 chr2R:15573824-15573944 6.73e-01 120 chr2R:8952312-8952432 9.34e-04 2_[+3(6.77e-05)]_12_[+3(1.09e-05)]_\ 90 chr2L:20927779-20927899 9.36e-03 78_[+1(7.39e-05)]_16_[+3(1.93e-05)]_\ 10 chr2R:9143893-9144013 5.42e-03 86_[+3(8.65e-05)]_26 chr2L:114574-114694 1.05e-03 20_[+1(7.39e-05)]_[+1(2.46e-05)]_21_\ [+4(3.69e-05)]_39_[+4(8.19e-06)]_8 chrX:620266-620386 7.16e-01 120 chr3L:1329889-1330009 2.10e-03 92_[+3(1.09e-05)]_20 chr3R:13088526-13088646 1.76e-03 2_[+1(7.39e-05)]_110 chrX:1342067-1342187 2.79e-04 10_[+1(2.46e-05)]_27_[+2(5.41e-05)]_\ 67 chr2L:3144853-3144973 3.41e-02 17_[+1(7.39e-05)]_95 chr2R:13485555-13485675 9.83e-03 68_[+3(1.09e-05)]_44 chrX:18515306-18515426 2.58e-01 120 chr4:835886-836006 2.05e-01 120 chr3R:12356257-12356377 2.29e-01 55_[+1(2.46e-05)]_57 chrX:15697356-15697476 1.25e-02 120 chrX:6759482-6759602 4.10e-02 44_[+1(2.46e-05)]_68 chrX:11137025-11137145 3.15e-02 120 chr3R:9679897-9680017 1.52e-02 37_[+3(4.50e-05)]_75 chr2L:9912729-9912849 7.14e-01 120 chr2R:21168845-21168965 1.60e-01 109_[+3(4.50e-05)]_3 chr2L:3023156-3023276 3.81e-02 [+1(7.39e-05)]_112 chrX:16637338-16637458 4.46e-03 18_[+2(6.42e-05)]_94 chrX:19616085-19616205 7.26e-03 99_[+1(2.46e-05)]_13 chr2R:16221753-16221873 8.80e-04 5_[+2(5.41e-05)]_44_[+1(7.39e-05)]_\ 55 chr2R:6746309-6746429 1.59e-04 33_[+1(7.39e-05)]_21_[+2(5.41e-05)]_\ 50 chrX:4100988-4101108 6.01e-03 59_[+1(2.46e-05)]_53 chr2R:22924719-22924839 4.33e-01 120 chr3L:14942912-14943032 2.67e-04 22_[+1(7.39e-05)]_90 chrX:19201753-19201873 2.04e-03 74_[+3(5.31e-05)]_38 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n07.farnam.hpc.yale.internal ********************************************************************************