******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG15601.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3L:3107561-3107681 1.0000 120 chr3R:30023584-30023704 1.0000 120 chr3R:16984360-16984480 1.0000 120 chr2L:12422431-12422551 1.0000 120 chr3R:18641381-18641501 1.0000 120 chr3R:13466348-13466468 1.0000 120 chr2R:23634353-23634473 1.0000 120 chr3L:22135084-22135204 1.0000 120 chr2R:6089414-6089534 1.0000 120 chr3L:5663389-5663509 1.0000 120 chr3L:5665474-5665594 1.0000 120 chr3R:17948366-17948486 1.0000 120 chr2R:22427061-22427181 1.0000 120 chrX:18238514-18238634 1.0000 120 chr3L:12868183-12868303 1.0000 120 chrX:18993272-18993392 1.0000 120 chr2L:750479-750599 1.0000 120 chr3L:13900796-13900916 1.0000 120 chr3R:4901296-4901416 1.0000 120 chr2L:745912-746032 1.0000 120 chr3L:22713788-22713908 1.0000 120 chrX:18226054-18226174 1.0000 120 chrX:10732914-10733034 1.0000 120 chrX:22515108-22515228 1.0000 120 chr3R:6445667-6445787 1.0000 120 chr3L:16543415-16543535 1.0000 120 chr3R:5059854-5059974 1.0000 120 chr2L:5894636-5894756 1.0000 120 chr2R:21199592-21199712 1.0000 120 chr2R:22593321-22593441 1.0000 120 chr3R:10076804-10076924 1.0000 120 chr3L:6978882-6979002 1.0000 120 chr3L:20005267-20005387 1.0000 120 chr3L:13433688-13433808 1.0000 120 chr3L:17549400-17549520 1.0000 120 chr2L:4928523-4928643 1.0000 120 chr3R:15281465-15281585 1.0000 120 chr3L:16984883-16985003 1.0000 120 chrX:15675364-15675484 1.0000 120 chrX:10733122-10733242 1.0000 120 chrX:9202467-9202587 1.0000 120 chr2L:17604784-17604904 1.0000 120 chr2L:4936497-4936617 1.0000 120 chr2L:12403091-12403211 1.0000 120 chr3R:27989319-27989439 1.0000 120 chr2R:21199794-21199914 1.0000 120 chrX:15121775-15121895 1.0000 120 chr2R:13168010-13168130 1.0000 120 chr2L:5618245-5618365 1.0000 120 chrX:7741829-7741949 1.0000 120 chr3L:4840066-4840186 1.0000 120 chr3R:16200426-16200546 1.0000 120 chr3R:23694740-23694860 1.0000 120 chr2L:14494978-14495098 1.0000 120 chr3L:22998333-22998453 1.0000 120 chr2R:20239584-20239704 1.0000 120 chr2L:11168688-11168808 1.0000 120 chr3L:17051229-17051349 1.0000 120 chrX:18505090-18505210 1.0000 120 chr2R:23355146-23355266 1.0000 120 chr2L:20024444-20024564 1.0000 120 chr2R:21193494-21193614 1.0000 120 chr3L:15116685-15116805 1.0000 120 chr2R:16132026-16132146 1.0000 120 chr2L:9120823-9120943 1.0000 120 chr2R:16517117-16517237 1.0000 120 chr3R:30309914-30310034 1.0000 120 chr2R:22832026-22832146 1.0000 120 chr2R:13453486-13453606 1.0000 120 chr3R:21889335-21889455 1.0000 120 chr2R:8614587-8614707 1.0000 120 chr2L:10544852-10544972 1.0000 120 chr3R:29781904-29782024 1.0000 120 chr3L:4177992-4178112 1.0000 120 chr2R:7756431-7756551 1.0000 120 chr2R:17456431-17456551 1.0000 120 chr3L:22135860-22135980 1.0000 120 chr3L:22681035-22681155 1.0000 120 chr2R:18634898-18635018 1.0000 120 chrX:1252836-1252956 1.0000 120 chr2R:7758800-7758920 1.0000 120 chr2L:20840579-20840699 1.0000 120 chr2L:1724668-1724788 1.0000 120 chr2L:8533795-8533915 1.0000 120 chr3R:19463290-19463410 1.0000 120 chrX:13278671-13278791 1.0000 120 chr2R:22666930-22667050 1.0000 120 chr2R:21097217-21097337 1.0000 120 chr2L:13570238-13570358 1.0000 120 chr3L:14599591-14599711 1.0000 120 chr3R:21158765-21158885 1.0000 120 chr2R:13566688-13566808 1.0000 120 chr2L:19166089-19166209 1.0000 120 chr3L:19268946-19269066 1.0000 120 chr3L:4976401-4976521 1.0000 120 chr3R:12456507-12456627 1.0000 120 chr3L:20718877-20718997 1.0000 120 chr2L:12458953-12459073 1.0000 120 chr3R:16255487-16255607 1.0000 120 chr2L:20322101-20322221 1.0000 120 chrX:18505294-18505414 1.0000 120 chr3L:20467604-20467724 1.0000 120 chr3R:18380612-18380732 1.0000 120 chr2L:2957108-2957228 1.0000 120 chr3L:3050263-3050383 1.0000 120 chr2R:11192948-11193068 1.0000 120 chr2L:6795411-6795531 1.0000 120 chr2L:13893361-13893481 1.0000 120 chr3L:8952305-8952425 1.0000 120 chr3L:12008061-12008181 1.0000 120 chrX:10048019-10048139 1.0000 120 chr2L:14230649-14230769 1.0000 120 chr2L:20840778-20840898 1.0000 120 chrX:15121975-15122095 1.0000 120 chr3R:29876601-29876721 1.0000 120 chr2L:1903281-1903401 1.0000 120 chr3L:7131792-7131912 1.0000 120 chr3R:18621304-18621424 1.0000 120 chr3R:15281670-15281790 1.0000 120 chr2L:20851716-20851836 1.0000 120 chr3L:13032112-13032232 1.0000 120 chr3R:12679021-12679141 1.0000 120 chr2L:4283160-4283280 1.0000 120 chr3R:23673235-23673355 1.0000 120 chr2R:9928259-9928379 1.0000 120 chr2R:17714542-17714662 1.0000 120 chrX:12456009-12456129 1.0000 120 chrX:6035484-6035604 1.0000 120 chr2L:268083-268203 1.0000 120 chr2L:3294585-3294705 1.0000 120 chr2R:17639000-17639120 1.0000 120 chr2L:267879-267999 1.0000 120 chrX:5085678-5085798 1.0000 120 chr4:466835-466955 1.0000 120 chr2R:11592270-11592390 1.0000 120 chr3L:10088573-10088693 1.0000 120 chrX:7938696-7938816 1.0000 120 chr2R:9136690-9136810 1.0000 120 chr3L:10734691-10734811 1.0000 120 chr3R:31287486-31287606 1.0000 120 chr3R:22487082-22487202 1.0000 120 chr2L:20835623-20835743 1.0000 120 chrX:6973382-6973502 1.0000 120 chr2L:11364144-11364264 1.0000 120 chr3R:10084536-10084656 1.0000 120 chr3L:12039289-12039409 1.0000 120 chr2R:6590420-6590540 1.0000 120 chr2L:16422822-16422942 1.0000 120 chr2L:10004684-10004804 1.0000 120 chr2R:23925164-23925284 1.0000 120 chr3L:14456414-14456534 1.0000 120 chr3R:30812450-30812570 1.0000 120 chr3L:343008-343128 1.0000 120 chr3L:1189017-1189137 1.0000 120 chr3R:19073741-19073861 1.0000 120 chr2R:10302938-10303058 1.0000 120 chrX:5091765-5091885 1.0000 120 chr3L:16887099-16887219 1.0000 120 chrX:2542306-2542426 1.0000 120 chr3L:18626842-18626962 1.0000 120 chr2L:7158953-7159073 1.0000 120 chr3R:4915111-4915231 1.0000 120 chr3R:16982473-16982593 1.0000 120 chr3R:8008001-8008121 1.0000 120 chr3L:4272286-4272406 1.0000 120 chr2L:5895341-5895461 1.0000 120 chr2L:7890866-7890986 1.0000 120 chr3R:10203678-10203798 1.0000 120 chr2L:1738232-1738352 1.0000 120 chr2R:9428011-9428131 1.0000 120 chr3L:3814078-3814198 1.0000 120 chr3L:3141514-3141634 1.0000 120 chr3R:15091730-15091850 1.0000 120 chrX:12202044-12202164 1.0000 120 chr2L:10505307-10505427 1.0000 120 chr3L:8956715-8956835 1.0000 120 chr2R:18972442-18972562 1.0000 120 chr3L:15073770-15073890 1.0000 120 chr2L:19542259-19542379 1.0000 120 chr2R:8174005-8174125 1.0000 120 chrX:16655197-16655317 1.0000 120 chr2L:18395212-18395332 1.0000 120 chr3L:15959056-15959176 1.0000 120 chr2L:1142799-1142919 1.0000 120 chr2L:3439680-3439800 1.0000 120 chr3L:14190076-14190196 1.0000 120 chr3L:3435068-3435188 1.0000 120 chr3R:21154258-21154378 1.0000 120 chr3L:20005477-20005597 1.0000 120 chr2L:13906050-13906170 1.0000 120 chrX:2707907-2708027 1.0000 120 chr2L:6179114-6179234 1.0000 120 chr2R:5653858-5653978 1.0000 120 chr3R:29782103-29782223 1.0000 120 chrX:10596088-10596208 1.0000 120 chr2R:16611259-16611379 1.0000 120 chr3R:9892080-9892200 1.0000 120 chrX:9201205-9201325 1.0000 120 chr2R:7759390-7759510 1.0000 120 chrX:2383297-2383417 1.0000 120 chr2L:7827880-7828000 1.0000 120 chr2L:9495445-9495565 1.0000 120 chr2R:13564808-13564928 1.0000 120 chr3L:9211488-9211608 1.0000 120 chr2L:8080780-8080900 1.0000 120 chrX:4172217-4172337 1.0000 120 chr2R:11031385-11031505 1.0000 120 chr2L:14972989-14973109 1.0000 120 chr3R:18785937-18786057 1.0000 120 chr2L:12822747-12822867 1.0000 120 chr3L:2734445-2734565 1.0000 120 chr2L:6455124-6455244 1.0000 120 chr2L:4333887-4334007 1.0000 120 chr2L:2999201-2999321 1.0000 120 chr2L:435339-435459 1.0000 120 chr2R:18405557-18405677 1.0000 120 chr2L:3803970-3804090 1.0000 120 chr3L:15089438-15089558 1.0000 120 chr2R:11175485-11175605 1.0000 120 chr2L:1723124-1723244 1.0000 120 chr2L:740158-740278 1.0000 120 chr3L:8058373-8058493 1.0000 120 chr2R:9541748-9541868 1.0000 120 chr2R:17535881-17536001 1.0000 120 chr3L:3873186-3873306 1.0000 120 chr2R:25084504-25084624 1.0000 120 chr2L:3851470-3851590 1.0000 120 chr2R:14481202-14481322 1.0000 120 chr3L:6964948-6965068 1.0000 120 chrX:17244991-17245111 1.0000 120 chr3L:18102189-18102309 1.0000 120 chr3L:1206797-1206917 1.0000 120 chr2R:17458313-17458433 1.0000 120 chr3L:18227473-18227593 1.0000 120 chr2R:24313250-24313370 1.0000 120 chr3L:8925800-8925920 1.0000 120 chr3R:27946711-27946831 1.0000 120 chr3R:19822301-19822421 1.0000 120 chr2L:13021282-13021402 1.0000 120 chr2L:19373975-19374095 1.0000 120 chr3L:110081-110201 1.0000 120 chr2L:9158470-9158590 1.0000 120 chr3R:6229226-6229346 1.0000 120 chr2R:12020633-12020753 1.0000 120 chr4:1199320-1199440 1.0000 120 chr3R:16004152-16004272 1.0000 120 chr2R:22403167-22403287 1.0000 120 chr2L:14537620-14537740 1.0000 120 chr2R:6636307-6636427 1.0000 120 chr2L:5445948-5446068 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG15601/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG15601.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.286 C 0.21 G 0.2 T 0.305 Background letter frequencies (from file dataset with add-one prior applied): A 0.286 C 0.21 G 0.2 T 0.305 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ATTSAAWK MEME-1 width = 8 sites = 195 llr = 1267 E-value = 6.2e-069 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 5:::aa31 pos.-specific C :::5::21 probability G 2::5:::3 matrix T 2aa:::55 bits 2.3 2.1 1.9 ** 1.6 ** ** Relative 1.4 ***** Entropy 1.2 ***** (9.4 bits) 0.9 ***** 0.7 ***** 0.5 ******* 0.2 ******** 0.0 -------- Multilevel ATTGAATT consensus G C AG sequence T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:11031385-11031505 23 4.05e-05 GCATTGATGA ATTGAATT gaattgaaat chrX:2707907-2708027 58 4.05e-05 CAGCCTTATT ATTGAATT CAATTCTATG chr2L:18395212-18395332 32 4.05e-05 GTTTAAAGCA ATTGAATT CGATTCAATC chr3R:8008001-8008121 57 4.05e-05 TGCTTCGAGG ATTGAATT GAAATTAAAC chrX:5091765-5091885 67 4.05e-05 TTGAAAAGAA ATTGAATT GAAGTtcgtc chr3L:12039289-12039409 109 4.05e-05 TCTCGTTTCA ATTGAATT CGTT chr3L:19268946-19269066 90 4.05e-05 GTTCTTATCA ATTGAATT AAAAGAATTG chr2R:13168010-13168130 39 4.05e-05 GGCGGTTTGA ATTGAATT CGATTTCGTT chrX:10733122-10733242 2 4.05e-05 T ATTGAATT TCATTTCATT chr3R:6445667-6445787 80 4.05e-05 actgaattga attgaatt gaattgattg chr3L:5663389-5663509 84 4.05e-05 TTCGATAAAT ATTGAATT GGCGCAGGGG chr3R:27946711-27946831 30 6.70e-05 AATAATAGGT ATTGAATG CGTGGTGTAC chr2L:1142799-1142919 63 6.70e-05 CTACGATGCA ATTGAATG CGAGGCACAT chr3L:14456414-14456534 28 6.70e-05 GTTGATAAGC ATTGAATG GGCTGATCGA chr3R:29781904-29782024 81 6.70e-05 GGAgaatcga attgaatg gaatggaatg chr2L:5618245-5618365 56 6.70e-05 TTGAATACGA ATTGAATG GCATTGAAAG chr2L:4928523-4928643 80 6.70e-05 GCCGCCGAGA ATTGAATG GAACTTGGCT chr3L:20005267-20005387 69 6.70e-05 GTCGGTAGCA ATTGAATG AGAAGGGAAA chr2R:22427061-22427181 49 6.70e-05 GTTCAGTATG ATTGAATG TGATTCATTG chr3L:18102189-18102309 53 1.10e-04 GTAAAAATAA ATTCAATT CGCTCTCACT chr2L:1723124-1723244 67 1.10e-04 TTCGAGCGTA ATTCAATT GAAATGCGAT chr2L:6455124-6455244 82 1.10e-04 aGTGTGTATT ATTCAATT GGATAAAGAA chrX:9201205-9201325 26 1.10e-04 Cttcaatcga attcaatt caattaatAT chr2R:10302938-10303058 64 1.10e-04 TGGGGTCCCC ATTCAATT TCGATTTCGG chr3R:19073741-19073861 26 1.10e-04 actccattca attcaatt caattcaact chr3R:31287486-31287606 33 1.10e-04 attcaattca attcaatt cagttcagtt chr3L:10734691-10734811 104 1.10e-04 attcaattca attcaatt ccattcCAG chr4:466835-466955 70 1.10e-04 GTTCAATCAA ATTCAATT GATTGACCAA chrX:5085678-5085798 37 1.10e-04 CATTCGTTCA ATTCAATT CCAATTCACT chr2L:20851716-20851836 91 1.10e-04 CCATGCCACC ATTCAATT GGTTCATATC chr3L:20718877-20718997 40 1.10e-04 TCAATTTGGC ATTCAATT GTTGTTGTGT chr3R:12456507-12456627 81 1.10e-04 AAAAGAAATC ATTCAATT TTGAAAGACT chrX:13278671-13278791 76 1.10e-04 tgaaactgaa attcaatt ggaaattgaT chrX:1252836-1252956 67 1.10e-04 GGAGCTGCGC ATTCAATT AGGTTAAATA chr2R:7756431-7756551 62 1.10e-04 attcaattct attcaatt caattcaaCT chr2L:14494978-14495098 4 1.10e-04 AAT ATTCAATT GATTCGATTT chr2L:12403091-12403211 8 1.10e-04 TGCCCGT ATTCAATT TAAACCACTG chr2L:17604784-17604904 84 1.10e-04 ATGTGCTTTC ATTCAATT TGAAAGGTAG chr3L:12868183-12868303 50 1.10e-04 AACTGTTCCC ATTCAATT TCATTTCGAC chr3L:15089438-15089558 10 1.75e-04 AAGTATGCT ATTCAATG ATATAAAATA chr3L:14190076-14190196 78 1.75e-04 TAAATCATTT ATTGAAAT TTATGTTTTC chr3R:10203678-10203798 8 1.75e-04 TTTACCT ATTGAAAT CTTAGTTGCC chr3R:16982473-16982593 105 1.75e-04 GCTTGACATA ATTGAAAT TAAATGTG chrX:2542306-2542426 31 1.75e-04 ATTAGCTTAT ATTGAAAT CAACTGATCC chr3R:30812450-30812570 93 1.75e-04 GCCGCGCTCA ATTGAAAT GGAAATGCAT chr2R:9136690-9136810 113 1.75e-04 TCTGAACCCA ATTGAAAT chr2L:13893361-13893481 38 1.75e-04 GAAATCACTC ATTCAATG GTCGACTTGT chr2R:11192948-11193068 65 1.75e-04 ACGTTTATTT ATTCAATG CTGACGCATT chr3R:19463290-19463410 79 1.75e-04 TTCGATTTTA ATTGAAAT CCAATAGAAA chr2R:22832026-22832146 44 1.75e-04 TTCAACTACC ATTGAAAT TTCAACTAAT chr2R:16132026-16132146 89 1.75e-04 GTAAATTGAA ATTGAAAT TGATTTACTT chr2R:20239584-20239704 72 1.75e-04 GATTGCAGTG ATTGAAAT GCTTTCAGGT chr3R:27989319-27989439 102 1.75e-04 TAAAAATGTA ATTGAAAT ATATAAAGTT chrX:18993272-18993392 54 1.75e-04 TTTCAATCGC ATTGAAAT AAAACGCTGA chr3R:13466348-13466468 90 1.75e-04 tgaaattgaa attgaaat agaaGCATTC chr3R:30023584-30023704 75 1.75e-04 CTAAGTTGCA ATTGAAAT CGAAGCGTCC chr2R:12020633-12020753 57 2.28e-04 GAATCTTTTG ATTGAAAG GTTCGGCTCT chr2L:3803970-3804090 94 2.28e-04 TCCGCGTAAA ATTGAAAG CAAATTGAAA chr2R:5653858-5653978 41 2.28e-04 AGTGGGCCCG ATTGAAAG AGCAATAAAA chr3L:15959056-15959176 62 2.28e-04 CCCTACGGCG ATTGAAAG TGAGAGTTGA chr3L:15073770-15073890 5 2.28e-04 ACTG ATTGAAAG GCTCTGACTC chr3R:4915111-4915231 88 2.28e-04 GTAGGGCCCA ATTGAAAG GAAAATTTTG chr3L:18626842-18626962 76 2.28e-04 tttcaactcg attGAAAG CAACTTTGCA chr3L:343008-343128 23 2.28e-04 GTACATTTTT ATTGAAAG CTTTCAAACG chr2R:17639000-17639120 55 2.28e-04 TTCGGTTACA ATTGAAAG ACATTCACTT chr2L:3294585-3294705 56 2.28e-04 ACATTAACCG ATTGAAAG AGAGACAGTG chr2R:9928259-9928379 64 2.28e-04 AATGATATCA ATTGAAAG GGAACTGTTT chr3R:23673235-23673355 51 2.28e-04 CAAGTCGGCA ATTGAAAG GGTAAACGGT chr3L:7131792-7131912 52 2.28e-04 AATGACTTAA ATTGAAAG TCACCGCCGG chr2L:6795411-6795531 40 2.28e-04 CGAGTTTCAA ATTGAAAG GGAAATGTAT chr2R:17456431-17456551 83 2.28e-04 TTACTATTTC ATTGAACT GCAGGTAGCG chr2R:23355146-23355266 67 2.28e-04 TGAAGTTGCG ATTGAAAG CAAGCCTGTT chr2L:4936497-4936617 53 2.28e-04 TGCTTTCAAT ATTGAAAG TGAAAACCAT chr3L:16984883-16985003 22 2.28e-04 TTGCCGGCTG ATTGAAAG CCCAATTCAC chr2L:5894636-5894756 75 2.28e-04 CACGCGTCAA ATTGAAAG CGAAATTGAA chrX:18226054-18226174 99 2.28e-04 GAACGCGCCG ATTGAAAG CGGGGAAATT chr3L:5665474-5665594 78 2.28e-04 ACGAAAGTCG ATTGAAAG CCGCCTTCAA chr2R:23634353-23634473 47 2.28e-04 ATTTCCACCG ATTGAAAG AGATCTTTCA chr3R:16984360-16984480 94 2.28e-04 TGACATTTCG ATTGAAAG TGGTAAAACA chr2R:14481202-14481322 50 3.15e-04 CGACAAAAAA ATTGAACG GTTGTGGGTG chrX:10596088-10596208 110 3.15e-04 CGCGTTttcc attcaaat tca chr2L:7890866-7890986 113 3.15e-04 TCTAGAGTTA GTTGAATT chr2L:20840778-20840898 113 3.15e-04 GCTAAGGCAA ATTCAAAT chr2R:21097217-21097337 90 3.15e-04 GACGGAAGAA ATTCAAAT TTCGTTATCG chr2R:18634898-18635018 91 3.15e-04 gtgttgtttg gttgaatt gggttcagat chr2R:21193494-21193614 94 3.15e-04 TGTGTCTGCG GTTGAATT GAACGGTTCC chrX:18238514-18238634 28 3.15e-04 CTCAACCCTG ATTGAACG CGAGTTGAAA chr3L:8956715-8956835 77 3.89e-04 AACCAAATAT GTTGAATG CAGCCCTGGC chr3R:21158765-21158885 7 3.89e-04 TGTTCA ATTCAACT CAAGTTCCCC chr2L:8533795-8533915 66 3.89e-04 GCGCTTTTCA ATTCAACT GTCGTCGAAT chrX:7741829-7741949 8 3.89e-04 TGATTTC GTTGAATG CGAAACGCTC chr3L:16543415-16543535 52 3.89e-04 TTCGTCGAAT GTTGAATG GCCAAAGCTT chr3R:18641381-18641501 106 3.89e-04 TGCAATTGTT GTTGAATG CGATTAC chr3R:6229226-6229346 104 4.38e-04 AGTATTCCTA GTTCAATT TCCGCTAAG chr2L:14230649-14230769 83 4.38e-04 TTGTACCTTG GTTCAATT TGGTTGTCCG chr3L:4177992-4178112 22 4.38e-04 TTAACGACTT GTTCAATT TGTTCTTCAT chr3L:17051229-17051349 49 4.38e-04 CAACCCTGCC GTTCAATT AAACAACAAC chr3L:6978882-6979002 61 4.38e-04 TTCAATTTAC GTTCAATT CCCTTATCGC chrX:10732914-10733034 17 4.38e-04 tccatttcaa gttcaatt tcaatttcga chr3R:17948366-17948486 85 4.38e-04 CTTCAATTAA GTTCAATT AAACCGCTGC chr2L:12422431-12422551 98 4.38e-04 AACTATGTCT ATTCAACG GCTGCTCGAA chr2L:14972989-14973109 28 4.84e-04 TATAAAAGTG GTTCAATG CTTGGCTAAG chr3R:29876601-29876721 15 4.84e-04 AAACATTTGC GTTGAAAT CAATTTCAAA chr3L:16887099-16887219 105 5.92e-04 TGAAACTGAA GTTGAACT CTGTGGAC chrX:12456009-12456129 97 5.92e-04 ATCGAATCGA Gttgaaag tgaaattgaa chr2L:1903281-1903401 37 5.92e-04 ACTTTGCTCA TTTGAATT CTAAGTCGGC chr3L:8952305-8952425 52 5.92e-04 AACAAATTTG GTTGAAAG GCTCTTGGCA chr2R:8614587-8614707 13 5.92e-04 TACATTCCTA TTTGAATT GCGCGCTCTT chr3L:13433688-13433808 103 5.92e-04 GTGCCAGTAA ATTGAATC AAAGCGAAAA chrX:22515108-22515228 58 5.92e-04 AAATGCGGCG GTTGAAAG CGCGCGAAGC chr2L:750479-750599 47 5.92e-04 GATGATGGAA GTTGAAAG CCAGCCTCCG chr3L:3873186-3873306 67 6.61e-04 AAGTTCTTAA TTTGAATG ACTTTTAATT chr2L:2999201-2999321 53 6.61e-04 ACTGTGGATG GTTGAACG CATCTCTAGA chrX:4172217-4172337 9 6.61e-04 ACATAGAT GTTGAACG GAATCCGAAC chr3L:10088573-10088693 46 6.61e-04 ACCAATGCAG GTTGAACG CGGTTGATCG chr2L:267879-267999 57 6.61e-04 AAGCCTACCA GTTGAACG ACGACGCTTT chr3R:18621304-18621424 9 6.61e-04 TGCGCGGC GTTCAAAT TGAAACTAAA chr2L:20840579-20840699 13 6.61e-04 TGTTCTGCTC GTTGAACG CGGGCCACTC chr2R:7758800-7758920 67 6.61e-04 GGTCACTCTC GTTGAACG ACTGATTTCA chrX:18505090-18505210 34 6.61e-04 ttgatttgat gttgaACG AAATGAAGGA chr3R:16004152-16004272 32 7.74e-04 TTGTTAAGTA TTTCAATT TCAACCGTTT chr2L:4333887-4334007 18 7.74e-04 GCCGCCGCAG TTTCAATT TCAGTTCGCA chr3R:9892080-9892200 51 7.74e-04 TCAATTTCAA TTTCAATT TATTTAACAA chr2R:16611259-16611379 93 7.74e-04 GTGACGCGCC TTTCAATT AGACACGAAA chr2L:6179114-6179234 22 7.74e-04 ATTCAATCGG ATTCAATC GCTCGTCGAC chr3R:21154258-21154378 42 7.74e-04 TTTTCGAGAC TTTCAATT ATGATTTCCA chr2L:10505307-10505427 111 7.74e-04 ACCACTTTCC GTTCAACT AC chr3R:15091730-15091850 80 7.74e-04 CGTGTACGGC GTTCAACT CTTCGCTTGG chr2L:5895341-5895461 56 7.74e-04 AAGTTTTCGG TTTCAATT TCCCATGGCA chr2L:16422822-16422942 77 7.74e-04 tcaattccca tttcaatt cagattgcga chr2R:6590420-6590540 84 7.74e-04 CCAAAGTCTT GTTCAACT TAAAGTGGCA chr2R:13566688-13566808 77 7.74e-04 CCTCTTTTGG ATTCAATC CAGTTGAAGA chr2L:13570238-13570358 74 7.74e-04 CCGCCATTGC GTTCAACT TGAATGCCTC chr2R:22666930-22667050 56 7.74e-04 TTGAACATGA TTTCAATT GACAATCGAA chr3L:22135860-22135980 42 7.74e-04 ATTTGAACCC TTTCAATT GCCGTCTGGC chr3L:22998333-22998453 40 7.74e-04 TTTGTTTCAG TTTCAATT TGACCGTCGA chrX:15675364-15675484 9 7.74e-04 TGCCTGCC GTTCAACT GCCTGATCTC chr3R:5059854-5059974 91 7.74e-04 CAATTGCCGC TTTCAATT AGAATCAATC chr3R:4901296-4901416 27 7.74e-04 CGACGCCATA TTTCAATT TCTGACCGAC chr2R:6089414-6089534 56 7.74e-04 TGAGGTAGTT TTTCAATT CAGGATCAAT chr3L:3107561-3107681 61 7.74e-04 ATCGATTGCC TTTCAATT CGCGTTCAAT chr2R:24313250-24313370 90 8.84e-04 GAAAAACTAA TTTGAAAT TATTGAGCAC chr2R:25084504-25084624 33 8.84e-04 ATCATTCGCA ATTGAAAC TAAAATTCGA chr2R:18972442-18972562 33 8.84e-04 AAACAAACAA ATTGAAAC AGACGCCACA chr3L:3814078-3814198 16 8.84e-04 AGAACAGCTG TTTGAAAT GTAACTGTTC chr2L:2957108-2957228 39 8.84e-04 CAGTTTTCAA ATTGAAAC TACATCATTT chr3L:4840066-4840186 66 8.84e-04 AAGCCTCTTC TTTCAATG AGTAAATTGT chrX:15121775-15121895 18 8.84e-04 cgaaatcgaa attgaaac tgaaaATGGG chr3L:13900796-13900916 75 8.84e-04 TGAGCTTTTA ATTGAAAC TGAGTTGTGG chr2L:8080780-8080900 44 9.97e-04 TTTTTGTGAT ATTGAATA AGAATCACTT chr3L:15116685-15116805 84 9.97e-04 TTTTGATTTG ATTGAATA GCATTGTTTT chr3R:15281465-15281585 70 9.97e-04 ACGTCAACAT ATTGAATA AATATTTTCA chr3L:1206797-1206917 8 1.11e-03 ACAGACT ATTCAAAC CCCTTAGCCA chr2R:17714542-17714662 25 1.11e-03 TGAAAAACAA ATTCAAAC GTAGACTGTC chr2R:6636307-6636427 14 1.23e-03 gatagagaTG TTTCAACT GTGAACAACA chr2L:19373975-19374095 16 1.23e-03 TTAATATATA TTTCAAAG ATTAGTGGTT chr2R:7759390-7759510 18 1.23e-03 CCTTTTGGCG TTTCAACT CGAGCATTTA chr2L:3439680-3439800 57 1.23e-03 TTGAGTTGTG TTTCAACT ACAGCAGTCT chr2R:11592270-11592390 63 1.23e-03 TGGTTTCATT TTTCAACT TCAATCTTCG chr3L:12008061-12008181 8 1.23e-03 CCAGTTA TTTCAACT CCCTTGCCGT chr3R:18380612-18380732 70 1.23e-03 AAAAAATAAC ATTCAACC AAGTTCATTG chr3L:4976401-4976521 78 1.23e-03 TTCAATCGGC TTTCAACT GCTCTCTTTG chr2L:19166089-19166209 55 1.23e-03 CACAAATTTG TTTCAACT TGTTACTGca chr2L:11168688-11168808 36 1.23e-03 TTTTATTCCC ATTCAATA AGCCTTTCAA chr2R:22593321-22593441 55 1.23e-03 TGTATATTTC ATTCAACC TCATTTGTTT chr3R:22487082-22487202 50 1.30e-03 CTACCGACTA TTTCAACG AATCATTCGA chr3R:16200426-16200546 101 1.30e-03 ACGGTCCAAT GTTCAATC AGCCGTTTCA chr2L:9158470-9158590 66 1.35e-03 TGAACGAATC ATTGAACA AAAAGGTGTG chr2L:9495445-9495565 36 1.35e-03 GGTGATTTTG GTTGAAAC GACGAGCCGA chrX:2383297-2383417 88 1.35e-03 GGGCAACGTA ATTGAACA CTGCGGCACT chr3L:1189017-1189137 81 1.35e-03 AAATTAAATA GTTGAAAC TGACGATAAT chr3R:10084536-10084656 66 1.35e-03 AAGCGGCGAC ATTGAACA GCGGTGCCTT chrX:10048019-10048139 73 1.35e-03 GTCGGCAGCG GTTGAAAC CACCACGCAG chr3R:16255487-16255607 74 1.35e-03 GGGCACGGAA ATTGAACA GAGTGCCGGC chr3R:23694740-23694860 96 1.35e-03 GAAAACAACG GTTGAAAC AAGATGAGCA chr2L:12822747-12822867 76 1.57e-03 GCTTCTTCGA TTTCAATC AAAGCCTCCG chr2R:8174005-8174125 64 1.57e-03 AAAAAATACT GTTCAATA GCTGCGCGTA chr2R:9428011-9428131 45 1.57e-03 TCTATTTCCA TTTCAATC CGCTTCCCAG chr2L:4283160-4283280 69 1.57e-03 AGAAATCCCA TTTCAATC GCAGCGTTCA chr2L:20322101-20322221 24 1.57e-03 TTTCCCGGTG TTTCAATC TTGTTCTCCG chr3L:22681035-22681155 10 1.57e-03 GCCAATGTT GTTCAATA TTTGCTGTGA chr3L:22135084-22135204 40 1.57e-03 AGCAGACGCT TTTCAATC ATTTAACAGT chr2R:17535881-17536001 74 1.71e-03 TAAAAAATCG GTTGAACA TGCTTCAAAA chr2L:745912-746032 81 1.71e-03 ACTCACTTTG GTTGAACA GAGTTGAAGG chr3L:18227473-18227593 96 1.76e-03 ATTTTCAGTA GTTCAAAA AATACGTGCA chr2L:10544852-10544972 95 1.76e-03 AATTGGTCGC GTTCAAAA GTTAGGCGCG chr2R:17458313-17458433 38 1.84e-03 acacatgtac TTTCAATA TCGACGATGG chr2L:19542259-19542379 14 1.84e-03 TAGATTAGGT TTTCAATA TTTCGGGTTT chr2R:23925164-23925284 85 1.84e-03 ACTTTTGTTA TTTCAACC GTGGCGAGTT chr3L:13032112-13032232 75 1.84e-03 CTGTTCCTGG TTTCAACC AGTAACAACA chr3L:20467604-20467724 71 1.84e-03 GTAGATTCAC TTTCAATA AAATCTGAGT chr3L:14599591-14599711 29 1.84e-03 ggggtacggc tttcAACC CTCCGCATTC chr3L:6964948-6965068 76 1.88e-03 CATTTTCATG TTTGAAAA TTGGTTCGAC chr4:1199320-1199440 20 1.91e-03 ATCCTTTTCA TTTGAACA TACGTATGTA chr2L:12458953-12459073 113 1.98e-03 CAACAATTTC TTTCAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:11031385-11031505 4e-05 22_[+1]_90 chrX:2707907-2708027 4e-05 57_[+1]_55 chr2L:18395212-18395332 4e-05 31_[+1]_81 chr3R:8008001-8008121 4e-05 56_[+1]_56 chrX:5091765-5091885 4e-05 66_[+1]_46 chr3L:12039289-12039409 4e-05 108_[+1]_4 chr3L:19268946-19269066 4e-05 89_[+1]_23 chr2R:13168010-13168130 4e-05 38_[+1]_74 chrX:10733122-10733242 4e-05 1_[+1]_111 chr3R:6445667-6445787 4e-05 79_[+1]_33 chr3L:5663389-5663509 4e-05 83_[+1]_29 chr3R:27946711-27946831 6.7e-05 29_[+1]_83 chr2L:1142799-1142919 6.7e-05 62_[+1]_50 chr3L:14456414-14456534 6.7e-05 27_[+1]_85 chr3R:29781904-29782024 6.7e-05 80_[+1]_32 chr2L:5618245-5618365 6.7e-05 55_[+1]_57 chr2L:4928523-4928643 6.7e-05 79_[+1]_33 chr3L:20005267-20005387 6.7e-05 68_[+1]_44 chr2R:22427061-22427181 6.7e-05 48_[+1]_64 chr3L:18102189-18102309 0.00011 52_[+1]_60 chr2L:1723124-1723244 0.00011 66_[+1]_46 chr2L:6455124-6455244 0.00011 81_[+1]_31 chrX:9201205-9201325 0.00011 25_[+1]_87 chr2R:10302938-10303058 0.00011 63_[+1]_49 chr3R:19073741-19073861 0.00011 25_[+1]_87 chr3R:31287486-31287606 0.00011 32_[+1]_80 chr3L:10734691-10734811 0.00011 103_[+1]_9 chr4:466835-466955 0.00011 69_[+1]_43 chrX:5085678-5085798 0.00011 36_[+1]_76 chr2L:20851716-20851836 0.00011 90_[+1]_22 chr3L:20718877-20718997 0.00011 39_[+1]_73 chr3R:12456507-12456627 0.00011 80_[+1]_32 chrX:13278671-13278791 0.00011 75_[+1]_37 chrX:1252836-1252956 0.00011 66_[+1]_46 chr2R:7756431-7756551 0.00011 61_[+1]_51 chr2L:14494978-14495098 0.00011 3_[+1]_109 chr2L:12403091-12403211 0.00011 7_[+1]_105 chr2L:17604784-17604904 0.00011 83_[+1]_29 chr3L:12868183-12868303 0.00011 49_[+1]_63 chr3L:15089438-15089558 0.00018 9_[+1]_103 chr3L:14190076-14190196 0.00018 77_[+1]_35 chr3R:10203678-10203798 0.00018 7_[+1]_105 chr3R:16982473-16982593 0.00018 104_[+1]_8 chrX:2542306-2542426 0.00018 30_[+1]_82 chr3R:30812450-30812570 0.00018 92_[+1]_20 chr2R:9136690-9136810 0.00018 112_[+1] chr2L:13893361-13893481 0.00018 37_[+1]_75 chr2R:11192948-11193068 0.00018 64_[+1]_48 chr3R:19463290-19463410 0.00018 78_[+1]_34 chr2R:22832026-22832146 0.00018 43_[+1]_69 chr2R:16132026-16132146 0.00018 88_[+1]_24 chr2R:20239584-20239704 0.00018 71_[+1]_41 chr3R:27989319-27989439 0.00018 101_[+1]_11 chrX:18993272-18993392 0.00018 53_[+1]_59 chr3R:13466348-13466468 0.00018 89_[+1]_23 chr3R:30023584-30023704 0.00018 74_[+1]_38 chr2R:12020633-12020753 0.00023 56_[+1]_56 chr2L:3803970-3804090 0.00023 93_[+1]_19 chr2R:5653858-5653978 0.00023 40_[+1]_72 chr3L:15959056-15959176 0.00023 61_[+1]_51 chr3L:15073770-15073890 0.00023 4_[+1]_108 chr3R:4915111-4915231 0.00023 87_[+1]_25 chr3L:18626842-18626962 0.00023 75_[+1]_37 chr3L:343008-343128 0.00023 22_[+1]_90 chr2R:17639000-17639120 0.00023 54_[+1]_58 chr2L:3294585-3294705 0.00023 55_[+1]_57 chr2R:9928259-9928379 0.00023 63_[+1]_49 chr3R:23673235-23673355 0.00023 50_[+1]_62 chr3L:7131792-7131912 0.00023 51_[+1]_61 chr2L:6795411-6795531 0.00023 39_[+1]_73 chr2R:17456431-17456551 0.00023 82_[+1]_30 chr2R:23355146-23355266 0.00023 66_[+1]_46 chr2L:4936497-4936617 0.00023 52_[+1]_60 chr3L:16984883-16985003 0.00023 21_[+1]_91 chr2L:5894636-5894756 0.00023 74_[+1]_38 chrX:18226054-18226174 0.00023 98_[+1]_14 chr3L:5665474-5665594 0.00023 77_[+1]_35 chr2R:23634353-23634473 0.00023 46_[+1]_66 chr3R:16984360-16984480 0.00023 93_[+1]_19 chr2R:14481202-14481322 0.00031 49_[+1]_63 chrX:10596088-10596208 0.00031 109_[+1]_3 chr2L:7890866-7890986 0.00031 112_[+1] chr2L:20840778-20840898 0.00031 112_[+1] chr2R:21097217-21097337 0.00031 89_[+1]_23 chr2R:18634898-18635018 0.00031 90_[+1]_22 chr2R:21193494-21193614 0.00031 93_[+1]_19 chrX:18238514-18238634 0.00031 27_[+1]_85 chr3L:8956715-8956835 0.00039 76_[+1]_36 chr3R:21158765-21158885 0.00039 6_[+1]_106 chr2L:8533795-8533915 0.00039 65_[+1]_47 chrX:7741829-7741949 0.00039 7_[+1]_105 chr3L:16543415-16543535 0.00039 51_[+1]_61 chr3R:18641381-18641501 0.00039 105_[+1]_7 chr3R:6229226-6229346 0.00044 103_[+1]_9 chr2L:14230649-14230769 0.00044 82_[+1]_30 chr3L:4177992-4178112 0.00044 21_[+1]_91 chr3L:17051229-17051349 0.00044 48_[+1]_64 chr3L:6978882-6979002 0.00044 60_[+1]_52 chrX:10732914-10733034 0.00044 16_[+1]_96 chr3R:17948366-17948486 0.00044 84_[+1]_28 chr2L:12422431-12422551 0.00044 97_[+1]_15 chr2L:14972989-14973109 0.00048 27_[+1]_85 chr3R:29876601-29876721 0.00048 14_[+1]_98 chr3L:16887099-16887219 0.00059 104_[+1]_8 chrX:12456009-12456129 0.00059 96_[+1]_16 chr2L:1903281-1903401 0.00059 36_[+1]_76 chr3L:8952305-8952425 0.00059 51_[+1]_61 chr2R:8614587-8614707 0.00059 12_[+1]_100 chr3L:13433688-13433808 0.00059 102_[+1]_10 chrX:22515108-22515228 0.00059 57_[+1]_55 chr2L:750479-750599 0.00059 46_[+1]_66 chr3L:3873186-3873306 0.00066 66_[+1]_46 chr2L:2999201-2999321 0.00066 52_[+1]_60 chrX:4172217-4172337 0.00066 8_[+1]_104 chr3L:10088573-10088693 0.00066 45_[+1]_67 chr2L:267879-267999 0.00066 56_[+1]_56 chr3R:18621304-18621424 0.00066 8_[+1]_104 chr2L:20840579-20840699 0.00066 12_[+1]_100 chr2R:7758800-7758920 0.00066 66_[+1]_46 chrX:18505090-18505210 0.00066 33_[+1]_79 chr3R:16004152-16004272 0.00077 31_[+1]_81 chr2L:4333887-4334007 0.00077 17_[+1]_95 chr3R:9892080-9892200 0.00077 50_[+1]_62 chr2R:16611259-16611379 0.00077 92_[+1]_20 chr2L:6179114-6179234 0.00077 21_[+1]_91 chr3R:21154258-21154378 0.00077 41_[+1]_71 chr2L:10505307-10505427 0.00077 110_[+1]_2 chr3R:15091730-15091850 0.00077 79_[+1]_33 chr2L:5895341-5895461 0.00077 55_[+1]_57 chr2L:16422822-16422942 0.00077 76_[+1]_36 chr2R:6590420-6590540 0.00077 83_[+1]_29 chr2R:13566688-13566808 0.00077 76_[+1]_36 chr2L:13570238-13570358 0.00077 73_[+1]_39 chr2R:22666930-22667050 0.00077 55_[+1]_57 chr3L:22135860-22135980 0.00077 41_[+1]_71 chr3L:22998333-22998453 0.00077 39_[+1]_73 chrX:15675364-15675484 0.00077 8_[+1]_104 chr3R:5059854-5059974 0.00077 90_[+1]_22 chr3R:4901296-4901416 0.00077 26_[+1]_86 chr2R:6089414-6089534 0.00077 55_[+1]_57 chr3L:3107561-3107681 0.00077 60_[+1]_52 chr2R:24313250-24313370 0.00088 89_[+1]_23 chr2R:25084504-25084624 0.00088 32_[+1]_80 chr2R:18972442-18972562 0.00088 32_[+1]_80 chr3L:3814078-3814198 0.00088 15_[+1]_97 chr2L:2957108-2957228 0.00088 38_[+1]_74 chr3L:4840066-4840186 0.00088 65_[+1]_47 chrX:15121775-15121895 0.00088 17_[+1]_95 chr3L:13900796-13900916 0.00088 74_[+1]_38 chr2L:8080780-8080900 0.001 43_[+1]_69 chr3L:15116685-15116805 0.001 83_[+1]_29 chr3R:15281465-15281585 0.001 69_[+1]_43 chr3L:1206797-1206917 0.0011 7_[+1]_105 chr2R:17714542-17714662 0.0011 24_[+1]_88 chr2R:6636307-6636427 0.0012 13_[+1]_99 chr2L:19373975-19374095 0.0012 15_[+1]_97 chr2R:7759390-7759510 0.0012 17_[+1]_95 chr2L:3439680-3439800 0.0012 56_[+1]_56 chr2R:11592270-11592390 0.0012 62_[+1]_50 chr3L:12008061-12008181 0.0012 7_[+1]_105 chr3R:18380612-18380732 0.0012 69_[+1]_43 chr3L:4976401-4976521 0.0012 77_[+1]_35 chr2L:19166089-19166209 0.0012 54_[+1]_58 chr2L:11168688-11168808 0.0012 35_[+1]_77 chr2R:22593321-22593441 0.0012 54_[+1]_58 chr3R:22487082-22487202 0.0013 49_[+1]_63 chr3R:16200426-16200546 0.0013 100_[+1]_12 chr2L:9158470-9158590 0.0013 65_[+1]_47 chr2L:9495445-9495565 0.0013 35_[+1]_77 chrX:2383297-2383417 0.0013 87_[+1]_25 chr3L:1189017-1189137 0.0013 80_[+1]_32 chr3R:10084536-10084656 0.0013 65_[+1]_47 chrX:10048019-10048139 0.0013 72_[+1]_40 chr3R:16255487-16255607 0.0013 73_[+1]_39 chr3R:23694740-23694860 0.0013 95_[+1]_17 chr2L:12822747-12822867 0.0016 75_[+1]_37 chr2R:8174005-8174125 0.0016 63_[+1]_49 chr2R:9428011-9428131 0.0016 44_[+1]_68 chr2L:4283160-4283280 0.0016 68_[+1]_44 chr2L:20322101-20322221 0.0016 23_[+1]_89 chr3L:22681035-22681155 0.0016 9_[+1]_103 chr3L:22135084-22135204 0.0016 39_[+1]_73 chr2R:17535881-17536001 0.0017 73_[+1]_39 chr2L:745912-746032 0.0017 80_[+1]_32 chr3L:18227473-18227593 0.0018 95_[+1]_17 chr2L:10544852-10544972 0.0018 94_[+1]_18 chr2R:17458313-17458433 0.0018 37_[+1]_75 chr2L:19542259-19542379 0.0018 13_[+1]_99 chr2R:23925164-23925284 0.0018 84_[+1]_28 chr3L:13032112-13032232 0.0018 74_[+1]_38 chr3L:20467604-20467724 0.0018 70_[+1]_42 chr3L:14599591-14599711 0.0018 28_[+1]_84 chr3L:6964948-6965068 0.0019 75_[+1]_37 chr4:1199320-1199440 0.0019 19_[+1]_93 chr2L:12458953-12459073 0.002 112_[+1] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATTSAAWK width=8 seqs=195 chr2R:11031385-11031505 ( 23) ATTGAATT 1 chrX:2707907-2708027 ( 58) ATTGAATT 1 chr2L:18395212-18395332 ( 32) ATTGAATT 1 chr3R:8008001-8008121 ( 57) ATTGAATT 1 chrX:5091765-5091885 ( 67) ATTGAATT 1 chr3L:12039289-12039409 ( 109) ATTGAATT 1 chr3L:19268946-19269066 ( 90) ATTGAATT 1 chr2R:13168010-13168130 ( 39) ATTGAATT 1 chrX:10733122-10733242 ( 2) ATTGAATT 1 chr3R:6445667-6445787 ( 80) ATTGAATT 1 chr3L:5663389-5663509 ( 84) ATTGAATT 1 chr3R:27946711-27946831 ( 30) ATTGAATG 1 chr2L:1142799-1142919 ( 63) ATTGAATG 1 chr3L:14456414-14456534 ( 28) ATTGAATG 1 chr3R:29781904-29782024 ( 81) ATTGAATG 1 chr2L:5618245-5618365 ( 56) ATTGAATG 1 chr2L:4928523-4928643 ( 80) ATTGAATG 1 chr3L:20005267-20005387 ( 69) ATTGAATG 1 chr2R:22427061-22427181 ( 49) ATTGAATG 1 chr3L:18102189-18102309 ( 53) ATTCAATT 1 chr2L:1723124-1723244 ( 67) ATTCAATT 1 chr2L:6455124-6455244 ( 82) ATTCAATT 1 chrX:9201205-9201325 ( 26) ATTCAATT 1 chr2R:10302938-10303058 ( 64) ATTCAATT 1 chr3R:19073741-19073861 ( 26) ATTCAATT 1 chr3R:31287486-31287606 ( 33) ATTCAATT 1 chr3L:10734691-10734811 ( 104) ATTCAATT 1 chr4:466835-466955 ( 70) ATTCAATT 1 chrX:5085678-5085798 ( 37) ATTCAATT 1 chr2L:20851716-20851836 ( 91) ATTCAATT 1 chr3L:20718877-20718997 ( 40) ATTCAATT 1 chr3R:12456507-12456627 ( 81) ATTCAATT 1 chrX:13278671-13278791 ( 76) ATTCAATT 1 chrX:1252836-1252956 ( 67) ATTCAATT 1 chr2R:7756431-7756551 ( 62) ATTCAATT 1 chr2L:14494978-14495098 ( 4) ATTCAATT 1 chr2L:12403091-12403211 ( 8) ATTCAATT 1 chr2L:17604784-17604904 ( 84) ATTCAATT 1 chr3L:12868183-12868303 ( 50) ATTCAATT 1 chr3L:15089438-15089558 ( 10) ATTCAATG 1 chr3L:14190076-14190196 ( 78) ATTGAAAT 1 chr3R:10203678-10203798 ( 8) ATTGAAAT 1 chr3R:16982473-16982593 ( 105) ATTGAAAT 1 chrX:2542306-2542426 ( 31) ATTGAAAT 1 chr3R:30812450-30812570 ( 93) ATTGAAAT 1 chr2R:9136690-9136810 ( 113) ATTGAAAT 1 chr2L:13893361-13893481 ( 38) ATTCAATG 1 chr2R:11192948-11193068 ( 65) ATTCAATG 1 chr3R:19463290-19463410 ( 79) ATTGAAAT 1 chr2R:22832026-22832146 ( 44) ATTGAAAT 1 chr2R:16132026-16132146 ( 89) ATTGAAAT 1 chr2R:20239584-20239704 ( 72) ATTGAAAT 1 chr3R:27989319-27989439 ( 102) ATTGAAAT 1 chrX:18993272-18993392 ( 54) ATTGAAAT 1 chr3R:13466348-13466468 ( 90) ATTGAAAT 1 chr3R:30023584-30023704 ( 75) ATTGAAAT 1 chr2R:12020633-12020753 ( 57) ATTGAAAG 1 chr2L:3803970-3804090 ( 94) ATTGAAAG 1 chr2R:5653858-5653978 ( 41) ATTGAAAG 1 chr3L:15959056-15959176 ( 62) ATTGAAAG 1 chr3L:15073770-15073890 ( 5) ATTGAAAG 1 chr3R:4915111-4915231 ( 88) ATTGAAAG 1 chr3L:18626842-18626962 ( 76) ATTGAAAG 1 chr3L:343008-343128 ( 23) ATTGAAAG 1 chr2R:17639000-17639120 ( 55) ATTGAAAG 1 chr2L:3294585-3294705 ( 56) ATTGAAAG 1 chr2R:9928259-9928379 ( 64) ATTGAAAG 1 chr3R:23673235-23673355 ( 51) ATTGAAAG 1 chr3L:7131792-7131912 ( 52) ATTGAAAG 1 chr2L:6795411-6795531 ( 40) ATTGAAAG 1 chr2R:17456431-17456551 ( 83) ATTGAACT 1 chr2R:23355146-23355266 ( 67) ATTGAAAG 1 chr2L:4936497-4936617 ( 53) ATTGAAAG 1 chr3L:16984883-16985003 ( 22) ATTGAAAG 1 chr2L:5894636-5894756 ( 75) ATTGAAAG 1 chrX:18226054-18226174 ( 99) ATTGAAAG 1 chr3L:5665474-5665594 ( 78) ATTGAAAG 1 chr2R:23634353-23634473 ( 47) ATTGAAAG 1 chr3R:16984360-16984480 ( 94) ATTGAAAG 1 chr2R:14481202-14481322 ( 50) ATTGAACG 1 chrX:10596088-10596208 ( 110) ATTCAAAT 1 chr2L:7890866-7890986 ( 113) GTTGAATT 1 chr2L:20840778-20840898 ( 113) ATTCAAAT 1 chr2R:21097217-21097337 ( 90) ATTCAAAT 1 chr2R:18634898-18635018 ( 91) GTTGAATT 1 chr2R:21193494-21193614 ( 94) GTTGAATT 1 chrX:18238514-18238634 ( 28) ATTGAACG 1 chr3L:8956715-8956835 ( 77) GTTGAATG 1 chr3R:21158765-21158885 ( 7) ATTCAACT 1 chr2L:8533795-8533915 ( 66) ATTCAACT 1 chrX:7741829-7741949 ( 8) GTTGAATG 1 chr3L:16543415-16543535 ( 52) GTTGAATG 1 chr3R:18641381-18641501 ( 106) GTTGAATG 1 chr3R:6229226-6229346 ( 104) GTTCAATT 1 chr2L:14230649-14230769 ( 83) GTTCAATT 1 chr3L:4177992-4178112 ( 22) GTTCAATT 1 chr3L:17051229-17051349 ( 49) GTTCAATT 1 chr3L:6978882-6979002 ( 61) GTTCAATT 1 chrX:10732914-10733034 ( 17) GTTCAATT 1 chr3R:17948366-17948486 ( 85) GTTCAATT 1 chr2L:12422431-12422551 ( 98) ATTCAACG 1 chr2L:14972989-14973109 ( 28) GTTCAATG 1 chr3R:29876601-29876721 ( 15) GTTGAAAT 1 chr3L:16887099-16887219 ( 105) GTTGAACT 1 chrX:12456009-12456129 ( 97) GTTGAAAG 1 chr2L:1903281-1903401 ( 37) TTTGAATT 1 chr3L:8952305-8952425 ( 52) GTTGAAAG 1 chr2R:8614587-8614707 ( 13) TTTGAATT 1 chr3L:13433688-13433808 ( 103) ATTGAATC 1 chrX:22515108-22515228 ( 58) GTTGAAAG 1 chr2L:750479-750599 ( 47) GTTGAAAG 1 chr3L:3873186-3873306 ( 67) TTTGAATG 1 chr2L:2999201-2999321 ( 53) GTTGAACG 1 chrX:4172217-4172337 ( 9) GTTGAACG 1 chr3L:10088573-10088693 ( 46) GTTGAACG 1 chr2L:267879-267999 ( 57) GTTGAACG 1 chr3R:18621304-18621424 ( 9) GTTCAAAT 1 chr2L:20840579-20840699 ( 13) GTTGAACG 1 chr2R:7758800-7758920 ( 67) GTTGAACG 1 chrX:18505090-18505210 ( 34) GTTGAACG 1 chr3R:16004152-16004272 ( 32) TTTCAATT 1 chr2L:4333887-4334007 ( 18) TTTCAATT 1 chr3R:9892080-9892200 ( 51) TTTCAATT 1 chr2R:16611259-16611379 ( 93) TTTCAATT 1 chr2L:6179114-6179234 ( 22) ATTCAATC 1 chr3R:21154258-21154378 ( 42) TTTCAATT 1 chr2L:10505307-10505427 ( 111) GTTCAACT 1 chr3R:15091730-15091850 ( 80) GTTCAACT 1 chr2L:5895341-5895461 ( 56) TTTCAATT 1 chr2L:16422822-16422942 ( 77) TTTCAATT 1 chr2R:6590420-6590540 ( 84) GTTCAACT 1 chr2R:13566688-13566808 ( 77) ATTCAATC 1 chr2L:13570238-13570358 ( 74) GTTCAACT 1 chr2R:22666930-22667050 ( 56) TTTCAATT 1 chr3L:22135860-22135980 ( 42) TTTCAATT 1 chr3L:22998333-22998453 ( 40) TTTCAATT 1 chrX:15675364-15675484 ( 9) GTTCAACT 1 chr3R:5059854-5059974 ( 91) TTTCAATT 1 chr3R:4901296-4901416 ( 27) TTTCAATT 1 chr2R:6089414-6089534 ( 56) TTTCAATT 1 chr3L:3107561-3107681 ( 61) TTTCAATT 1 chr2R:24313250-24313370 ( 90) TTTGAAAT 1 chr2R:25084504-25084624 ( 33) ATTGAAAC 1 chr2R:18972442-18972562 ( 33) ATTGAAAC 1 chr3L:3814078-3814198 ( 16) TTTGAAAT 1 chr2L:2957108-2957228 ( 39) ATTGAAAC 1 chr3L:4840066-4840186 ( 66) TTTCAATG 1 chrX:15121775-15121895 ( 18) ATTGAAAC 1 chr3L:13900796-13900916 ( 75) ATTGAAAC 1 chr2L:8080780-8080900 ( 44) ATTGAATA 1 chr3L:15116685-15116805 ( 84) ATTGAATA 1 chr3R:15281465-15281585 ( 70) ATTGAATA 1 chr3L:1206797-1206917 ( 8) ATTCAAAC 1 chr2R:17714542-17714662 ( 25) ATTCAAAC 1 chr2R:6636307-6636427 ( 14) TTTCAACT 1 chr2L:19373975-19374095 ( 16) TTTCAAAG 1 chr2R:7759390-7759510 ( 18) TTTCAACT 1 chr2L:3439680-3439800 ( 57) TTTCAACT 1 chr2R:11592270-11592390 ( 63) TTTCAACT 1 chr3L:12008061-12008181 ( 8) TTTCAACT 1 chr3R:18380612-18380732 ( 70) ATTCAACC 1 chr3L:4976401-4976521 ( 78) TTTCAACT 1 chr2L:19166089-19166209 ( 55) TTTCAACT 1 chr2L:11168688-11168808 ( 36) ATTCAATA 1 chr2R:22593321-22593441 ( 55) ATTCAACC 1 chr3R:22487082-22487202 ( 50) TTTCAACG 1 chr3R:16200426-16200546 ( 101) GTTCAATC 1 chr2L:9158470-9158590 ( 66) ATTGAACA 1 chr2L:9495445-9495565 ( 36) GTTGAAAC 1 chrX:2383297-2383417 ( 88) ATTGAACA 1 chr3L:1189017-1189137 ( 81) GTTGAAAC 1 chr3R:10084536-10084656 ( 66) ATTGAACA 1 chrX:10048019-10048139 ( 73) GTTGAAAC 1 chr3R:16255487-16255607 ( 74) ATTGAACA 1 chr3R:23694740-23694860 ( 96) GTTGAAAC 1 chr2L:12822747-12822867 ( 76) TTTCAATC 1 chr2R:8174005-8174125 ( 64) GTTCAATA 1 chr2R:9428011-9428131 ( 45) TTTCAATC 1 chr2L:4283160-4283280 ( 69) TTTCAATC 1 chr2L:20322101-20322221 ( 24) TTTCAATC 1 chr3L:22681035-22681155 ( 10) GTTCAATA 1 chr3L:22135084-22135204 ( 40) TTTCAATC 1 chr2R:17535881-17536001 ( 74) GTTGAACA 1 chr2L:745912-746032 ( 81) GTTGAACA 1 chr3L:18227473-18227593 ( 96) GTTCAAAA 1 chr2L:10544852-10544972 ( 95) GTTCAAAA 1 chr2R:17458313-17458433 ( 38) TTTCAATA 1 chr2L:19542259-19542379 ( 14) TTTCAATA 1 chr2R:23925164-23925284 ( 85) TTTCAACC 1 chr3L:13032112-13032232 ( 75) TTTCAACC 1 chr3L:20467604-20467724 ( 71) TTTCAATA 1 chr3L:14599591-14599711 ( 29) TTTCAACC 1 chr3L:6964948-6965068 ( 76) TTTGAAAA 1 chr4:1199320-1199440 ( 20) TTTGAACA 1 chr2L:12458953-12459073 ( 113) TTTCAACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 8.28629 E= 6.2e-069 94 -1425 21 -47 -1425 -1425 -1425 171 -1425 -1425 -1425 171 -1425 115 142 -1425 181 -1425 -1425 -1425 181 -1425 -1425 -1425 15 -3 -1425 65 -148 -71 53 66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 195 E= 6.2e-069 0.548718 0.000000 0.230769 0.220513 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.466667 0.533333 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.317949 0.205128 0.000000 0.476923 0.102564 0.128205 0.287179 0.482051 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATTSAAWK MEME-1 regular expression -------------------------------------------------------------------------------- [AGT]TT[GC]AA[TAC][TG] -------------------------------------------------------------------------------- Time 7.53 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTTCAAT MEME-2 width = 8 sites = 88 llr = 629 E-value = 4.4e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 11:::a8: pos.-specific C 51::a::3 probability G 22::::2: matrix T 26aa:::7 bits 2.3 * 2.1 * 1.9 ** 1.6 **** Relative 1.4 **** Entropy 1.2 ***** (10.3 bits) 0.9 ****** 0.7 ****** 0.5 ****** 0.2 ******** 0.0 -------- Multilevel CTTTCAAT consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:14972989-14973109 112 3.12e-05 ATGTTGCCTT CTTTCAAT T chr3L:14190076-14190196 49 3.12e-05 CAAAATTTCA CTTTCAAT TATAAGCAAT chr3L:14456414-14456534 60 3.12e-05 ACGGCATCAA CTTTCAAT TGCCGAGGGG chr2L:1903281-1903401 54 3.12e-05 TCTAAGTCGG CTTTCAAT GAAAGCGGCA chr3L:20718877-20718997 27 3.12e-05 CTGTCAACCA CTTTCAAT TTGGCATTCA chr3R:21158765-21158885 106 3.12e-05 GAACGAACCT CTTTCAAT ATCTTTC chr2L:20840579-20840699 44 3.12e-05 CAATCGCCTG CTTTCAAT CTGTCGGTTC chr2L:11168688-11168808 47 3.12e-05 TTCAATAAGC CTTTCAAT ATCGACTTGG chr2L:14494978-14495098 93 3.12e-05 CCAGCGGATT CTTTCAAT GTCTGTTTTC chr2L:4936497-4936617 45 3.12e-05 GCCGGCGCTG CTTTCAAT ATTGAAAGTG chr2L:4928523-4928643 99 3.12e-05 AACTTGGCTG CTTTCAAT AGCTGTTGAA chrX:18993272-18993392 43 3.12e-05 TTTCAATTTG CTTTCAAT CGCATTGAAA chr3L:12868183-12868303 67 3.12e-05 TTCATTTCGA CTTTCAAT TTGAATGAAA chr2R:23634353-23634473 59 3.12e-05 TGAAAGAGAT CTTTCAAT CCAAGCTCTT chr2R:11192948-11193068 89 5.27e-05 CATTCAGTCA CTTTCAAC TCGGAATTGG chr2L:12458953-12459073 99 5.27e-05 GTCGTCTTCA CTTTCAAC AATTTCTTTC chr2R:22666930-22667050 84 5.27e-05 TTTACTCTCG CTTTCAAC AAATTAAGTT chr3L:5665474-5665594 39 5.27e-05 TATTTAACTG CTTTCAAC GTCAGCACCA chr3L:343008-343128 85 7.32e-05 CGCAGAGCGC CGTTCAAT CGATTAAGCT chr3L:4976401-4976521 66 7.32e-05 TTCAATCAGA CGTTCAAT CGGCTTTCAA chr2L:13570238-13570358 52 7.32e-05 CTGACGACGT CGTTCAAT CTGCCCGCCA chr3L:3107561-3107681 71 7.32e-05 TTTCAATTCG CGTTCAAT CGAACCACAT chr2R:21193494-21193614 74 1.03e-04 TGAAACGATC GTTTCAAT TCTGTGTCTG chr3R:16200426-16200546 113 1.03e-04 TCAATCAGCC GTTTCAAT chr3L:20005267-20005387 91 1.03e-04 GGGAAAGTAT GTTTCAAT CGAAAGTCGC chr3L:6978882-6979002 49 1.03e-04 CCGACATTTG GTTTCAAT TTACGTTCAA chrX:9201205-9201325 15 1.24e-04 CTTTACAAGA CCttcaat cgaattcaat chr3R:19463290-19463410 52 1.24e-04 TGCGCTCAGC CCTTCAAT TAATTCCGAT chr3R:5059854-5059974 77 1.24e-04 CCTTCGGCCG CCTTCAAT TGCCGCTTTC chr3R:17948366-17948486 74 1.24e-04 CAATCAACCA CCTTCAAT TAAGTTCAAT chr3L:8956715-8956835 62 1.38e-04 ATGGCACTGC CGTTCAAC CAAATATGTT chrX:1252836-1252956 91 1.38e-04 AATACGAATC CGTTCAAC AATCCACTAG chr3R:18641381-18641501 65 1.38e-04 GTACAACAAC CGTTCAAC CAGACGCTTC chr2L:2999201-2999321 80 1.81e-04 AAATCGGTCG CTTTCAGT CACAAAACTG chr2L:6455124-6455244 3 1.81e-04 TC GTTTCAAC CAAACCGCCC chr2R:13564808-13564928 103 1.81e-04 ACTCGTGTTT CTTTCAGT TCGCTTATTG chr3L:18626842-18626962 65 1.81e-04 attccgattc gtttcaac tcgattGAAA chrX:15121975-15122095 101 1.81e-04 GAAAATGTAA CTTTCAGT GTGACATACA chr2L:20840778-20840898 18 1.81e-04 TTCGCTTCAG CTTTCAGT TCGCAGTCAG chr2R:13566688-13566808 59 1.81e-04 GAAGGTGACA GTTTCAAC CCTCTTTTGG chr2R:22832026-22832146 32 1.81e-04 TTTGACATGT GTTTCAAC TACCATTGAA chr3R:10084536-10084656 80 2.15e-04 AACAGCGGTG CCTTCAAC CGATCGCATT chr4:466835-466955 59 2.15e-04 GTAATCATGG GGTTCAAT CAAATTCAAT chr3L:16543415-16543535 108 2.15e-04 GCTTTTCCCG CCTTCAAC ACTCA chr3R:9892080-9892200 38 3.03e-04 CAACTACTTG ATTTCAAT TTCAATTTCA chr3R:30812450-30812570 38 3.03e-04 GGGGCACGAC TTTTCAAT TGAAACCTGC chr2L:16422822-16422942 64 3.03e-04 gctcttttcc atttcaat tcccatttca chr2L:267879-267999 72 3.03e-04 ACGACGACGC TTTTCAAT CTATAGTGGC chr3L:22135860-22135980 60 3.03e-04 GCCGTCTGGC ATTTCAAT TGCGCTTAAC chr2L:17604784-17604904 62 3.03e-04 GTAAATTTCC TTTTCAAT CAAAATGTGC chrX:10732914-10733034 40 3.03e-04 ttcgatttcg atttcaat CTGCCGTCTC chr2L:12422431-12422551 57 3.03e-04 CCCCATTCGT ATTTCAAT TCCACTTCGA chr2R:8174005-8174125 101 3.38e-04 CGGTTGGAGC GCTTCAAT CGGTAAACGC chr3L:12039289-12039409 31 3.38e-04 AGAACGGAAC GCTTCAAT TGATAATGAA chr2L:4283160-4283280 81 3.66e-04 TCAATCGCAG CGTTCAGT GGCCGTAAGT chr2R:20239584-20239704 87 3.66e-04 AATGCTTTCA GGTTCAAC GGAAACATCG chr2R:22427061-22427181 38 3.66e-04 GAAAAGTTTG CGTTCAGT ATGATTGAAT chr2R:16611259-16611379 68 4.77e-04 GTTTACCCTT TTTTCAAC CGCAAGTGTG chrX:10596088-10596208 78 4.77e-04 GCCGGCAGGT TTTTCAAC GAATGTTTTC chr2L:6179114-6179234 11 4.77e-04 CTGCACGTTA CATTCAAT CGGATTCAAT chr2L:18395212-18395332 77 4.77e-04 ACATGTACGC CATTCAAT TCCATTCAAA chrX:2542306-2542426 54 4.77e-04 GATCCACGCC TTTTCAAC TTAAAGGCCA chr2R:10302938-10303058 81 4.77e-04 TTCGATTTCG GTTTCAGT TGAGCGCTGC chr2R:7758800-7758920 79 4.77e-04 TGAACGACTG ATTTCAAC GGCAATCGGC chrX:7741829-7741949 26 4.77e-04 CGAAACGCTC ATTTCAAC CACATTTGAA chrX:22515108-22515228 86 4.77e-04 GATCAACTTG GTTTCAGT TAGAAACGAA chr2L:750479-750599 76 4.77e-04 GGAGGATGCC CATTCAAT CTGCGATTCG chr3R:31287486-31287606 47 5.63e-04 aattcagttc agttcaat tcattcaGCG chr2R:8614587-8614707 87 5.63e-04 ACACCCTCCA GCTTCAAC CAGACATTCA chr2R:13168010-13168130 5 5.63e-04 CAGC AGTTCAAT GGAAACTGAA chr2R:21199592-21199712 113 5.63e-04 TTCAGTTCCA TGTTCAAT chrX:18238514-18238634 2 5.73e-04 C CGTTCAGC CAGAGCCACT chr3L:3050263-3050383 80 6.08e-04 CTTTTAGAGA GTTTCAGC CGGTCACACT chr2L:11364144-11364264 2 6.68e-04 G ACTTCAAT CAAGATCTCG chr2L:9120823-9120943 33 6.68e-04 TTGCTGTGTA TCTTCAAT GATCCCATCT chr3R:27989319-27989439 33 6.68e-04 acaactgcat tcttcaat cagatttgta chr3L:3814078-3814198 29 7.32e-04 GAAATGTAAC TGTTCAAC TTTCTAATCG chr3L:12008061-12008181 26 7.32e-04 CCCTTGCCGT TGTTCAAC AATGTTTTAT chr3L:18227473-18227593 87 8.21e-04 TCTAAATAAA TTTTCAGT AGTTCAAAAA chr2L:20835623-20835743 50 8.21e-04 TGTCCGGGAG ATTTCAGT CAAGCGTAGC chr3L:10734691-10734811 88 8.21e-04 TCCCGCTttc gattcaat tcaattcaat chr3R:23673235-23673355 30 8.21e-04 TAAAGGAACT TTTTCAGT CAGCAAGTCG chr2L:14230649-14230769 16 8.21e-04 TTTTTTGTTT ATTTCAGT AGTCTTTCAA chr2R:7756431-7756551 51 8.21e-04 CGCTCCACtc gattcaat tctattcaat chr3R:15281465-15281585 82 8.21e-04 TGAATAAATA TTTTCAGT TGAACATCAC chr3R:15091730-15091850 60 8.77e-04 TTTAAGTGGC ACTTCAAC TTCGTGTACG chr2L:4333887-4334007 34 9.69e-04 TTTCAGTTCG CATTCAGT TCTTCGTCGT chr3L:4177992-4178112 1 9.69e-04 . GATTCAAC CAGTTAACGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:14972989-14973109 3.1e-05 111_[+2]_1 chr3L:14190076-14190196 3.1e-05 48_[+2]_64 chr3L:14456414-14456534 3.1e-05 59_[+2]_53 chr2L:1903281-1903401 3.1e-05 53_[+2]_59 chr3L:20718877-20718997 3.1e-05 26_[+2]_86 chr3R:21158765-21158885 3.1e-05 105_[+2]_7 chr2L:20840579-20840699 3.1e-05 43_[+2]_69 chr2L:11168688-11168808 3.1e-05 46_[+2]_66 chr2L:14494978-14495098 3.1e-05 92_[+2]_20 chr2L:4936497-4936617 3.1e-05 44_[+2]_68 chr2L:4928523-4928643 3.1e-05 98_[+2]_14 chrX:18993272-18993392 3.1e-05 42_[+2]_70 chr3L:12868183-12868303 3.1e-05 66_[+2]_46 chr2R:23634353-23634473 3.1e-05 58_[+2]_54 chr2R:11192948-11193068 5.3e-05 88_[+2]_24 chr2L:12458953-12459073 5.3e-05 98_[+2]_14 chr2R:22666930-22667050 5.3e-05 83_[+2]_29 chr3L:5665474-5665594 5.3e-05 38_[+2]_74 chr3L:343008-343128 7.3e-05 84_[+2]_28 chr3L:4976401-4976521 7.3e-05 65_[+2]_47 chr2L:13570238-13570358 7.3e-05 51_[+2]_61 chr3L:3107561-3107681 7.3e-05 70_[+2]_42 chr2R:21193494-21193614 0.0001 73_[+2]_39 chr3R:16200426-16200546 0.0001 112_[+2] chr3L:20005267-20005387 0.0001 90_[+2]_22 chr3L:6978882-6979002 0.0001 48_[+2]_64 chrX:9201205-9201325 0.00012 14_[+2]_98 chr3R:19463290-19463410 0.00012 51_[+2]_61 chr3R:5059854-5059974 0.00012 76_[+2]_36 chr3R:17948366-17948486 0.00012 73_[+2]_39 chr3L:8956715-8956835 0.00014 61_[+2]_51 chrX:1252836-1252956 0.00014 90_[+2]_22 chr3R:18641381-18641501 0.00014 64_[+2]_48 chr2L:2999201-2999321 0.00018 79_[+2]_33 chr2L:6455124-6455244 0.00018 2_[+2]_110 chr2R:13564808-13564928 0.00018 102_[+2]_10 chr3L:18626842-18626962 0.00018 64_[+2]_48 chrX:15121975-15122095 0.00018 100_[+2]_12 chr2L:20840778-20840898 0.00018 17_[+2]_95 chr2R:13566688-13566808 0.00018 58_[+2]_54 chr2R:22832026-22832146 0.00018 31_[+2]_81 chr3R:10084536-10084656 0.00022 79_[+2]_33 chr4:466835-466955 0.00022 58_[+2]_54 chr3L:16543415-16543535 0.00022 107_[+2]_5 chr3R:9892080-9892200 0.0003 37_[+2]_75 chr3R:30812450-30812570 0.0003 37_[+2]_75 chr2L:16422822-16422942 0.0003 63_[+2]_49 chr2L:267879-267999 0.0003 71_[+2]_41 chr3L:22135860-22135980 0.0003 59_[+2]_53 chr2L:17604784-17604904 0.0003 61_[+2]_51 chrX:10732914-10733034 0.0003 39_[+2]_73 chr2L:12422431-12422551 0.0003 56_[+2]_56 chr2R:8174005-8174125 0.00034 100_[+2]_12 chr3L:12039289-12039409 0.00034 30_[+2]_82 chr2L:4283160-4283280 0.00037 80_[+2]_32 chr2R:20239584-20239704 0.00037 86_[+2]_26 chr2R:22427061-22427181 0.00037 37_[+2]_75 chr2R:16611259-16611379 0.00048 67_[+2]_45 chrX:10596088-10596208 0.00048 77_[+2]_35 chr2L:6179114-6179234 0.00048 10_[+2]_102 chr2L:18395212-18395332 0.00048 76_[+2]_36 chrX:2542306-2542426 0.00048 53_[+2]_59 chr2R:10302938-10303058 0.00048 80_[+2]_32 chr2R:7758800-7758920 0.00048 78_[+2]_34 chrX:7741829-7741949 0.00048 25_[+2]_87 chrX:22515108-22515228 0.00048 85_[+2]_27 chr2L:750479-750599 0.00048 75_[+2]_37 chr3R:31287486-31287606 0.00056 46_[+2]_66 chr2R:8614587-8614707 0.00056 86_[+2]_26 chr2R:13168010-13168130 0.00056 4_[+2]_108 chr2R:21199592-21199712 0.00056 112_[+2] chrX:18238514-18238634 0.00057 1_[+2]_111 chr3L:3050263-3050383 0.00061 79_[+2]_33 chr2L:11364144-11364264 0.00067 1_[+2]_111 chr2L:9120823-9120943 0.00067 32_[+2]_80 chr3R:27989319-27989439 0.00067 32_[+2]_80 chr3L:3814078-3814198 0.00073 28_[+2]_84 chr3L:12008061-12008181 0.00073 25_[+2]_87 chr3L:18227473-18227593 0.00082 86_[+2]_26 chr2L:20835623-20835743 0.00082 49_[+2]_63 chr3L:10734691-10734811 0.00082 87_[+2]_25 chr3R:23673235-23673355 0.00082 29_[+2]_83 chr2L:14230649-14230769 0.00082 15_[+2]_97 chr2R:7756431-7756551 0.00082 50_[+2]_62 chr3R:15281465-15281585 0.00082 81_[+2]_31 chr3R:15091730-15091850 0.00088 59_[+2]_53 chr2L:4333887-4334007 0.00097 33_[+2]_79 chr3L:4177992-4178112 0.00097 [+2]_112 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTTCAAT width=8 seqs=88 chr2L:14972989-14973109 ( 112) CTTTCAAT 1 chr3L:14190076-14190196 ( 49) CTTTCAAT 1 chr3L:14456414-14456534 ( 60) CTTTCAAT 1 chr2L:1903281-1903401 ( 54) CTTTCAAT 1 chr3L:20718877-20718997 ( 27) CTTTCAAT 1 chr3R:21158765-21158885 ( 106) CTTTCAAT 1 chr2L:20840579-20840699 ( 44) CTTTCAAT 1 chr2L:11168688-11168808 ( 47) CTTTCAAT 1 chr2L:14494978-14495098 ( 93) CTTTCAAT 1 chr2L:4936497-4936617 ( 45) CTTTCAAT 1 chr2L:4928523-4928643 ( 99) CTTTCAAT 1 chrX:18993272-18993392 ( 43) CTTTCAAT 1 chr3L:12868183-12868303 ( 67) CTTTCAAT 1 chr2R:23634353-23634473 ( 59) CTTTCAAT 1 chr2R:11192948-11193068 ( 89) CTTTCAAC 1 chr2L:12458953-12459073 ( 99) CTTTCAAC 1 chr2R:22666930-22667050 ( 84) CTTTCAAC 1 chr3L:5665474-5665594 ( 39) CTTTCAAC 1 chr3L:343008-343128 ( 85) CGTTCAAT 1 chr3L:4976401-4976521 ( 66) CGTTCAAT 1 chr2L:13570238-13570358 ( 52) CGTTCAAT 1 chr3L:3107561-3107681 ( 71) CGTTCAAT 1 chr2R:21193494-21193614 ( 74) GTTTCAAT 1 chr3R:16200426-16200546 ( 113) GTTTCAAT 1 chr3L:20005267-20005387 ( 91) GTTTCAAT 1 chr3L:6978882-6979002 ( 49) GTTTCAAT 1 chrX:9201205-9201325 ( 15) CCTTCAAT 1 chr3R:19463290-19463410 ( 52) CCTTCAAT 1 chr3R:5059854-5059974 ( 77) CCTTCAAT 1 chr3R:17948366-17948486 ( 74) CCTTCAAT 1 chr3L:8956715-8956835 ( 62) CGTTCAAC 1 chrX:1252836-1252956 ( 91) CGTTCAAC 1 chr3R:18641381-18641501 ( 65) CGTTCAAC 1 chr2L:2999201-2999321 ( 80) CTTTCAGT 1 chr2L:6455124-6455244 ( 3) GTTTCAAC 1 chr2R:13564808-13564928 ( 103) CTTTCAGT 1 chr3L:18626842-18626962 ( 65) GTTTCAAC 1 chrX:15121975-15122095 ( 101) CTTTCAGT 1 chr2L:20840778-20840898 ( 18) CTTTCAGT 1 chr2R:13566688-13566808 ( 59) GTTTCAAC 1 chr2R:22832026-22832146 ( 32) GTTTCAAC 1 chr3R:10084536-10084656 ( 80) CCTTCAAC 1 chr4:466835-466955 ( 59) GGTTCAAT 1 chr3L:16543415-16543535 ( 108) CCTTCAAC 1 chr3R:9892080-9892200 ( 38) ATTTCAAT 1 chr3R:30812450-30812570 ( 38) TTTTCAAT 1 chr2L:16422822-16422942 ( 64) ATTTCAAT 1 chr2L:267879-267999 ( 72) TTTTCAAT 1 chr3L:22135860-22135980 ( 60) ATTTCAAT 1 chr2L:17604784-17604904 ( 62) TTTTCAAT 1 chrX:10732914-10733034 ( 40) ATTTCAAT 1 chr2L:12422431-12422551 ( 57) ATTTCAAT 1 chr2R:8174005-8174125 ( 101) GCTTCAAT 1 chr3L:12039289-12039409 ( 31) GCTTCAAT 1 chr2L:4283160-4283280 ( 81) CGTTCAGT 1 chr2R:20239584-20239704 ( 87) GGTTCAAC 1 chr2R:22427061-22427181 ( 38) CGTTCAGT 1 chr2R:16611259-16611379 ( 68) TTTTCAAC 1 chrX:10596088-10596208 ( 78) TTTTCAAC 1 chr2L:6179114-6179234 ( 11) CATTCAAT 1 chr2L:18395212-18395332 ( 77) CATTCAAT 1 chrX:2542306-2542426 ( 54) TTTTCAAC 1 chr2R:10302938-10303058 ( 81) GTTTCAGT 1 chr2R:7758800-7758920 ( 79) ATTTCAAC 1 chrX:7741829-7741949 ( 26) ATTTCAAC 1 chrX:22515108-22515228 ( 86) GTTTCAGT 1 chr2L:750479-750599 ( 76) CATTCAAT 1 chr3R:31287486-31287606 ( 47) AGTTCAAT 1 chr2R:8614587-8614707 ( 87) GCTTCAAC 1 chr2R:13168010-13168130 ( 5) AGTTCAAT 1 chr2R:21199592-21199712 ( 113) TGTTCAAT 1 chrX:18238514-18238634 ( 2) CGTTCAGC 1 chr3L:3050263-3050383 ( 80) GTTTCAGC 1 chr2L:11364144-11364264 ( 2) ACTTCAAT 1 chr2L:9120823-9120943 ( 33) TCTTCAAT 1 chr3R:27989319-27989439 ( 33) TCTTCAAT 1 chr3L:3814078-3814198 ( 29) TGTTCAAC 1 chr3L:12008061-12008181 ( 26) TGTTCAAC 1 chr3L:18227473-18227593 ( 87) TTTTCAGT 1 chr2L:20835623-20835743 ( 50) ATTTCAGT 1 chr3L:10734691-10734811 ( 88) GATTCAAT 1 chr3R:23673235-23673355 ( 30) TTTTCAGT 1 chr2L:14230649-14230769 ( 16) ATTTCAGT 1 chr2R:7756431-7756551 ( 51) GATTCAAT 1 chr3R:15281465-15281585 ( 82) TTTTCAGT 1 chr3R:15091730-15091850 ( 60) ACTTCAAC 1 chr2L:4333887-4334007 ( 34) CATTCAGT 1 chr3L:4177992-4178112 ( 1) GATTCAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.85841 E= 4.4e-003 -95 118 11 -94 -184 -51 -5 93 -1310 -1310 -1310 171 -1310 -1310 -1310 171 -1310 225 -1310 -1310 181 -1310 -1310 -1310 152 -1310 -13 -1310 -1310 49 -1310 121 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 88 E= 4.4e-003 0.147727 0.477273 0.215909 0.159091 0.079545 0.147727 0.193182 0.579545 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.818182 0.000000 0.181818 0.000000 0.000000 0.295455 0.000000 0.704545 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCAAT MEME-2 regular expression -------------------------------------------------------------------------------- [CG]TTTCAA[TC] -------------------------------------------------------------------------------- Time 13.45 secs. ******************************************************************************** ******************************************************************************** MOTIF GCHGCGCG MEME-3 width = 8 sites = 9 llr = 99 E-value = 2.9e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::3::::: pos.-specific C :a2:a:a1 probability G a::a:a:9 matrix T ::4::::: bits 2.3 ** **** 2.1 ** **** 1.9 ** ***** 1.6 ** ***** Relative 1.4 ** ***** Entropy 1.2 ** ***** (15.9 bits) 0.9 ** ***** 0.7 ** ***** 0.5 ** ***** 0.2 ******** 0.0 -------- Multilevel GCTGCGCG consensus A sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:8174005-8174125 72 4.52e-06 CTGTTCAATA GCTGCGCG TAGTATTTAA chr2R:10302938-10303058 94 4.52e-06 TCAGTTGAGC GCTGCGCG TGCTACGGTA chr3R:18621304-18621424 39 4.52e-06 TGAATTGGCG GCTGCGCG TTTGTTTATT chr3L:10734691-10734811 5 8.76e-06 GTGA GCAGCGCG TGCAAAGTGG chrX:5085678-5085798 64 8.76e-06 TCTGTTTTTC GCAGCGCG CGCGGAAAGA chr2L:750479-750599 104 8.76e-06 TCAGACAAAA GCAGCGCG ACTTGGACG chrX:9201205-9201325 71 1.19e-05 CTCCCTCGGC GCCGCGCG CCCTCTCGCT chr2L:6179114-6179234 46 1.19e-05 CGACCTTCGT GCCGCGCG TTACAAGagt chr3R:10084536-10084656 21 1.66e-05 GCTGGCAGAG GCTGCGCC GCGGCAGAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:8174005-8174125 4.5e-06 71_[+3]_41 chr2R:10302938-10303058 4.5e-06 93_[+3]_19 chr3R:18621304-18621424 4.5e-06 38_[+3]_74 chr3L:10734691-10734811 8.8e-06 4_[+3]_108 chrX:5085678-5085798 8.8e-06 63_[+3]_49 chr2L:750479-750599 8.8e-06 103_[+3]_9 chrX:9201205-9201325 1.2e-05 70_[+3]_42 chr2L:6179114-6179234 1.2e-05 45_[+3]_67 chr3R:10084536-10084656 1.7e-05 20_[+3]_92 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCHGCGCG width=8 seqs=9 chr2R:8174005-8174125 ( 72) GCTGCGCG 1 chr2R:10302938-10303058 ( 94) GCTGCGCG 1 chr3R:18621304-18621424 ( 39) GCTGCGCG 1 chr3L:10734691-10734811 ( 5) GCAGCGCG 1 chrX:5085678-5085798 ( 64) GCAGCGCG 1 chr2L:750479-750599 ( 104) GCAGCGCG 1 chrX:9201205-9201325 ( 71) GCCGCGCG 1 chr2L:6179114-6179234 ( 46) GCCGCGCG 1 chr3R:10084536-10084656 ( 21) GCTGCGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.0203 E= 2.9e+002 -982 -982 232 -982 -982 225 -982 -982 22 8 -982 54 -982 -982 232 -982 -982 225 -982 -982 -982 -982 232 -982 -982 225 -982 -982 -982 -92 215 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 2.9e+002 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.222222 0.000000 0.444444 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.111111 0.888889 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCHGCGCG MEME-3 regular expression -------------------------------------------------------------------------------- GC[TAC]GCGCG -------------------------------------------------------------------------------- Time 19.21 secs. ******************************************************************************** ******************************************************************************** MOTIF AAATYGAA MEME-4 width = 8 sites = 35 llr = 297 E-value = 5.8e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 8aa:::aa pos.-specific C 2::14::: probability G :::21a:: matrix T :::75::: bits 2.3 * 2.1 * 1.9 ** *** 1.6 ** *** Relative 1.4 ** *** Entropy 1.2 *** *** (12.2 bits) 0.9 *** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAATTGAA consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:3851470-3851590 60 6.01e-05 GATACTGTGT AAATCGAA TTTGTAATGT chr2L:3803970-3804090 103 6.01e-05 AATTGAAAGC AAATTGAA AAGCTCACGA chr2L:1142799-1142919 82 6.01e-05 GAGGCACATG AAATTGAA CGACGGGTGT chr3L:3141514-3141634 64 6.01e-05 CTTCTCCACG AAATCGAA AGCCGACCAC chr3R:4915111-4915231 33 6.01e-05 GCACAGGCCT AAATTGAA AGTCGACACG chrX:5091765-5091885 54 6.01e-05 GGGTAATAAG AAATTGAA AAGAAATTGA chr3L:12039289-12039409 88 6.01e-05 ACCCCACCGA AAATTGAA AAGTCTCGTT chrX:12456009-12456129 107 6.01e-05 Gttgaaagtg aaattgaa acgcga chr2R:9928259-9928379 40 6.01e-05 GCAAGAAAAG AAATTGAA ACATCGAATG chr2R:21097217-21097337 30 6.01e-05 AATATTATTA AAATTGAA CGCAAAAACA chrX:13278671-13278791 62 6.01e-05 GCTGTCattg aaattgaa actgaaattc chr2L:10544852-10544972 78 6.01e-05 CGGATGCCCA AAATCGAA ATTGGTCGCG chr2R:13453486-13453606 19 6.01e-05 ATTTTTTATA AAATCGAA TTTACCATCG chr2R:16132026-16132146 81 6.01e-05 ATGCTTTTGT AAATTGAA ATTGAAATTG chrX:15121775-15121895 10 6.01e-05 ttgaagccg aaatcgaa attgaaactg chr2L:5894636-5894756 85 6.01e-05 ATTGAAAGCG AAATTGAA CGTGGGATTC chr3R:13466348-13466468 82 6.01e-05 aactgaactg aaattgaa attgaaatag chr2R:25084504-25084624 107 9.95e-05 TGCTATCACT AAAGTGAA AAAGAA chrX:2707907-2708027 81 9.95e-05 CTATGCAATC AAAGCGAA ACCACAAACC chr2L:20840778-20840898 74 9.95e-05 AAAATCGCGC AAAGCGAA TGTTATTGTG chr3L:13433688-13433808 111 9.95e-05 AAATTGAATC AAAGCGAA AA chr2L:745912-746032 1 9.95e-05 . AAAGCGAA ACGCACATAA chrX:18993272-18993392 71 9.95e-05 TAAAACGCTG AAAGCGAA ACCGCCAACA chr2R:12020633-12020753 42 1.44e-04 AATTTAAATC CAATTGAA TCTTTTGATT chr2L:7827880-7828000 60 1.44e-04 ACGCGGTTGG CAATCGAA CGCAACAGTA chr2R:18972442-18972562 16 1.44e-04 TTATGACCAA CAATTGAA AACAAACAAA chr3L:18626842-18626962 92 1.44e-04 AGCAACTTTG CAATCGAA AAATAAAGCC chr3R:16255487-16255607 91 1.44e-04 AGAGTGCCGG CAATTGAA GGGTGGCAAC chr2R:22666930-22667050 66 1.44e-04 TTTCAATTGA CAATCGAA TTTACTCTCG chr2R:11031385-11031505 37 1.67e-04 AATTgaattg aaatggaa atgggaatgg chr3R:8008001-8008121 20 1.67e-04 GTAACAGATT AAATGGAA AAGATGCGGC chrX:15121975-15122095 86 1.67e-04 ATTAAATAAA AAATGGAA AATGTAACTT chr3L:19268946-19269066 31 2.08e-04 TCGCAGTCGC AAACTGAA TTGAATGCGT chr2R:21193494-21193614 60 2.08e-04 GAAAGGCCAA AAACTGAA ACGATCGTTT chr2R:13168010-13168130 15 2.08e-04 AGTTCAATGG AAACTGAA TGGATCGGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:3851470-3851590 6e-05 59_[+4]_53 chr2L:3803970-3804090 6e-05 102_[+4]_10 chr2L:1142799-1142919 6e-05 81_[+4]_31 chr3L:3141514-3141634 6e-05 63_[+4]_49 chr3R:4915111-4915231 6e-05 32_[+4]_80 chrX:5091765-5091885 6e-05 53_[+4]_59 chr3L:12039289-12039409 6e-05 87_[+4]_25 chrX:12456009-12456129 6e-05 106_[+4]_6 chr2R:9928259-9928379 6e-05 39_[+4]_73 chr2R:21097217-21097337 6e-05 29_[+4]_83 chrX:13278671-13278791 6e-05 61_[+4]_51 chr2L:10544852-10544972 6e-05 77_[+4]_35 chr2R:13453486-13453606 6e-05 18_[+4]_94 chr2R:16132026-16132146 6e-05 80_[+4]_32 chrX:15121775-15121895 6e-05 9_[+4]_103 chr2L:5894636-5894756 6e-05 84_[+4]_28 chr3R:13466348-13466468 6e-05 81_[+4]_31 chr2R:25084504-25084624 0.0001 106_[+4]_6 chrX:2707907-2708027 0.0001 80_[+4]_32 chr2L:20840778-20840898 0.0001 73_[+4]_39 chr3L:13433688-13433808 0.0001 110_[+4]_2 chr2L:745912-746032 0.0001 [+4]_112 chrX:18993272-18993392 0.0001 70_[+4]_42 chr2R:12020633-12020753 0.00014 41_[+4]_71 chr2L:7827880-7828000 0.00014 59_[+4]_53 chr2R:18972442-18972562 0.00014 15_[+4]_97 chr3L:18626842-18626962 0.00014 91_[+4]_21 chr3R:16255487-16255607 0.00014 90_[+4]_22 chr2R:22666930-22667050 0.00014 65_[+4]_47 chr2R:11031385-11031505 0.00017 36_[+4]_76 chr3R:8008001-8008121 0.00017 19_[+4]_93 chrX:15121975-15122095 0.00017 85_[+4]_27 chr3L:19268946-19269066 0.00021 30_[+4]_82 chr2R:21193494-21193614 0.00021 59_[+4]_53 chr2R:13168010-13168130 0.00021 14_[+4]_98 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAATYGAA width=8 seqs=35 chr2L:3851470-3851590 ( 60) AAATCGAA 1 chr2L:3803970-3804090 ( 103) AAATTGAA 1 chr2L:1142799-1142919 ( 82) AAATTGAA 1 chr3L:3141514-3141634 ( 64) AAATCGAA 1 chr3R:4915111-4915231 ( 33) AAATTGAA 1 chrX:5091765-5091885 ( 54) AAATTGAA 1 chr3L:12039289-12039409 ( 88) AAATTGAA 1 chrX:12456009-12456129 ( 107) AAATTGAA 1 chr2R:9928259-9928379 ( 40) AAATTGAA 1 chr2R:21097217-21097337 ( 30) AAATTGAA 1 chrX:13278671-13278791 ( 62) AAATTGAA 1 chr2L:10544852-10544972 ( 78) AAATCGAA 1 chr2R:13453486-13453606 ( 19) AAATCGAA 1 chr2R:16132026-16132146 ( 81) AAATTGAA 1 chrX:15121775-15121895 ( 10) AAATCGAA 1 chr2L:5894636-5894756 ( 85) AAATTGAA 1 chr3R:13466348-13466468 ( 82) AAATTGAA 1 chr2R:25084504-25084624 ( 107) AAAGTGAA 1 chrX:2707907-2708027 ( 81) AAAGCGAA 1 chr2L:20840778-20840898 ( 74) AAAGCGAA 1 chr3L:13433688-13433808 ( 111) AAAGCGAA 1 chr2L:745912-746032 ( 1) AAAGCGAA 1 chrX:18993272-18993392 ( 71) AAAGCGAA 1 chr2R:12020633-12020753 ( 42) CAATTGAA 1 chr2L:7827880-7828000 ( 60) CAATCGAA 1 chr2R:18972442-18972562 ( 16) CAATTGAA 1 chr3L:18626842-18626962 ( 92) CAATCGAA 1 chr3R:16255487-16255607 ( 91) CAATTGAA 1 chr2R:22666930-22667050 ( 66) CAATCGAA 1 chr2R:11031385-11031505 ( 37) AAATGGAA 1 chr3R:8008001-8008121 ( 20) AAATGGAA 1 chrX:15121975-15122095 ( 86) AAATGGAA 1 chr3L:19268946-19269066 ( 31) AAACTGAA 1 chr2R:21193494-21193614 ( 60) AAACTGAA 1 chr2R:13168010-13168130 ( 15) AAACTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.4775 E= 5.8e+002 154 -29 -1177 -1177 181 -1177 -1177 -1177 181 -1177 -1177 -1177 -1177 -129 -22 129 -1177 82 -122 83 -1177 -1177 232 -1177 181 -1177 -1177 -1177 181 -1177 -1177 -1177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 35 E= 5.8e+002 0.828571 0.171429 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.085714 0.171429 0.742857 0.000000 0.371429 0.085714 0.542857 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATYGAA MEME-4 regular expression -------------------------------------------------------------------------------- AAAT[TC]GAA -------------------------------------------------------------------------------- Time 24.94 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGCAGCG MEME-5 width = 8 sites = 4 llr = 48 E-value = 3.9e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::a::: pos.-specific C :::a::a: probability G :aa::a:a matrix T a::::::: bits 2.3 *** *** 2.1 *** *** 1.9 ******* 1.6 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.3 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGGCAGCG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:13021282-13021402 72 6.15e-06 GTAGCTGACT TGGCAGCG ATTGTGAAAC chr2R:24313250-24313370 111 6.15e-06 TGAGCACATC TGGCAGCG CC chr2L:5895341-5895461 69 6.15e-06 CAATTTCCCA TGGCAGCG CATCCCACTC chrX:10048019-10048139 3 6.15e-06 AC TGGCAGCG TTTCGCGGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:13021282-13021402 6.2e-06 71_[+5]_41 chr2R:24313250-24313370 6.2e-06 110_[+5]_2 chr2L:5895341-5895461 6.2e-06 68_[+5]_44 chrX:10048019-10048139 6.2e-06 2_[+5]_110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGCAGCG width=8 seqs=4 chr2L:13021282-13021402 ( 72) TGGCAGCG 1 chr2R:24313250-24313370 ( 111) TGGCAGCG 1 chr2L:5895341-5895461 ( 69) TGGCAGCG 1 chrX:10048019-10048139 ( 3) TGGCAGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 12.7858 E= 3.9e+004 -865 -865 -865 171 -865 -865 232 -865 -865 -865 232 -865 -865 225 -865 -865 180 -865 -865 -865 -865 -865 232 -865 -865 225 -865 -865 -865 -865 232 -865 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 4 E= 3.9e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCAGCG MEME-5 regular expression -------------------------------------------------------------------------------- TGGCAGCG -------------------------------------------------------------------------------- Time 30.60 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:3107561-3107681 4.02e-03 59_[+2(3.12e-05)]_3_[+2(7.32e-05)]_\ 42 chr3R:30023584-30023704 4.30e-03 30_[+4(6.01e-05)]_4_[+4(6.01e-05)]_\ 4_[+4(6.01e-05)]_16_[+4(6.01e-05)]_34 chr3R:16984360-16984480 9.65e-02 120 chr2L:12422431-12422551 8.25e-03 120 chr3R:18641381-18641501 2.82e-02 120 chr3R:13466348-13466468 2.99e-02 81_[+4(6.01e-05)]_31 chr2R:23634353-23634473 1.09e-02 58_[+2(3.12e-05)]_54 chr3L:22135084-22135204 2.27e-01 120 chr2R:6089414-6089534 7.13e-02 120 chr3L:5663389-5663509 9.39e-03 83_[+1(4.05e-05)]_29 chr3L:5665474-5665594 6.74e-03 38_[+2(5.27e-05)]_74 chr3R:17948366-17948486 3.00e-03 120 chr2R:22427061-22427181 6.25e-03 48_[+1(6.70e-05)]_64 chrX:18238514-18238634 6.67e-02 120 chr3L:12868183-12868303 1.01e-03 66_[+2(3.12e-05)]_46 chrX:18993272-18993392 1.45e-06 1_[+5(3.56e-05)]_22_[+2(3.12e-05)]_\ 3_[+2(3.12e-05)]_20_[+4(9.95e-05)]_42 chr2L:750479-750599 1.41e-04 103_[+3(8.76e-06)]_9 chr3L:13900796-13900916 1.02e-02 120 chr3R:4901296-4901416 1.46e-01 120 chr2L:745912-746032 7.01e-02 [+4(9.95e-05)]_112 chr3L:22713788-22713908 5.32e-01 120 chrX:18226054-18226174 1.23e-02 120 chrX:10732914-10733034 6.44e-02 120 chrX:22515108-22515228 1.88e-02 120 chr3R:6445667-6445787 3.66e-02 49_[+1(4.05e-05)]_17_[+1(4.05e-05)]_\ 2_[+1(4.05e-05)]_28 chr3L:16543415-16543535 5.96e-02 120 chr3R:5059854-5059974 3.66e-04 89_[+2(3.12e-05)]_23 chr2L:5894636-5894756 2.24e-03 42_[+4(6.01e-05)]_22_[+4(6.01e-05)]_\ 4_[+4(6.01e-05)]_28 chr2R:21199592-21199712 3.36e-01 120 chr2R:22593321-22593441 4.20e-02 120 chr3R:10076804-10076924 7.91e-02 120 chr3L:6978882-6979002 3.87e-02 59_[+2(7.32e-05)]_53 chr3L:20005267-20005387 8.50e-05 68_[+1(6.70e-05)]_44 chr3L:13433688-13433808 2.33e-02 100_[+4(6.01e-05)]_2_[+4(9.95e-05)]_\ 2 chr3L:17549400-17549520 4.65e-01 120 chr2L:4928523-4928643 3.89e-05 79_[+1(6.70e-05)]_11_[+2(3.12e-05)]_\ 14 chr3R:15281465-15281585 1.27e-02 120 chr3L:16984883-16985003 1.47e-01 120 chrX:15675364-15675484 3.93e-02 120 chrX:10733122-10733242 6.42e-02 1_[+1(4.05e-05)]_111 chrX:9202467-9202587 5.44e-01 120 chr2L:17604784-17604904 1.67e-03 120 chr2L:4936497-4936617 1.58e-04 44_[+2(3.12e-05)]_4_[+4(9.95e-05)]_\ 56 chr2L:12403091-12403211 3.28e-02 120 chr3R:27989319-27989439 2.80e-02 120 chr2R:21199794-21199914 7.61e-01 120 chrX:15121775-15121895 4.03e-02 9_[+4(6.01e-05)]_55_[+4(9.95e-05)]_\ 40 chr2R:13168010-13168130 1.80e-03 38_[+1(4.05e-05)]_74 chr2L:5618245-5618365 2.32e-03 55_[+1(6.70e-05)]_57 chrX:7741829-7741949 6.78e-02 120 chr3L:4840066-4840186 8.37e-03 64_[+2(3.12e-05)]_48 chr3R:16200426-16200546 6.79e-02 120 chr3R:23694740-23694860 2.13e-01 120 chr2L:14494978-14495098 3.70e-03 92_[+2(3.12e-05)]_20 chr3L:22998333-22998453 7.40e-02 120 chr2R:20239584-20239704 1.44e-04 103_[+3(9.17e-05)]_9 chr2L:11168688-11168808 7.85e-02 46_[+2(3.12e-05)]_66 chr3L:17051229-17051349 1.50e-04 25_[+3(9.17e-05)]_14_[+2(7.32e-05)]_\ 65 chrX:18505090-18505210 3.50e-02 120 chr2R:23355146-23355266 8.31e-02 120 chr2L:20024444-20024564 9.33e-01 120 chr2R:21193494-21193614 1.38e-03 120 chr3L:15116685-15116805 3.69e-01 120 chr2R:16132026-16132146 1.24e-02 80_[+4(6.01e-05)]_32 chr2L:9120823-9120943 2.54e-01 120 chr2R:16517117-16517237 4.97e-01 120 chr3R:30309914-30310034 8.16e-01 120 chr2R:22832026-22832146 1.31e-02 120 chr2R:13453486-13453606 2.55e-02 18_[+4(6.01e-05)]_94 chr3R:21889335-21889455 9.55e-01 120 chr2R:8614587-8614707 4.18e-02 120 chr2L:10544852-10544972 1.03e-02 77_[+4(6.01e-05)]_35 chr3R:29781904-29782024 2.29e-02 80_[+1(6.70e-05)]_32 chr3L:4177992-4178112 5.40e-02 120 chr2R:7756431-7756551 5.63e-02 120 chr2R:17456431-17456551 2.49e-02 120 chr3L:22135860-22135980 5.64e-03 40_[+2(3.12e-05)]_72 chr3L:22681035-22681155 2.77e-01 120 chr2R:18634898-18635018 4.94e-02 120 chrX:1252836-1252956 8.91e-04 59_[+3(9.17e-05)]_53 chr2R:7758800-7758920 5.83e-02 120 chr2L:20840579-20840699 2.03e-02 29_[+2(3.12e-05)]_6_[+2(3.12e-05)]_\ 69 chr2L:1724668-1724788 3.49e-02 120 chr2L:8533795-8533915 2.22e-02 120 chr3R:19463290-19463410 7.05e-04 120 chrX:13278671-13278791 5.36e-03 61_[+4(6.01e-05)]_51 chr2R:22666930-22667050 2.61e-03 83_[+2(5.27e-05)]_29 chr2R:21097217-21097337 1.22e-02 29_[+4(6.01e-05)]_83 chr2L:13570238-13570358 1.29e-02 51_[+2(7.32e-05)]_61 chr3L:14599591-14599711 3.95e-02 27_[+2(5.27e-05)]_85 chr3R:21158765-21158885 1.08e-02 105_[+2(3.12e-05)]_7 chr2R:13566688-13566808 6.00e-02 120 chr2L:19166089-19166209 2.11e-02 120 chr3L:19268946-19269066 2.26e-03 37_[+1(6.70e-05)]_44_[+1(4.05e-05)]_\ 23 chr3L:4976401-4976521 1.35e-02 65_[+2(7.32e-05)]_3_[+2(5.27e-05)]_\ 36 chr3R:12456507-12456627 2.91e-02 120 chr3L:20718877-20718997 1.56e-02 26_[+2(3.12e-05)]_86 chr2L:12458953-12459073 7.46e-02 98_[+2(5.27e-05)]_5_[+2(5.27e-05)]_\ 1 chr3R:16255487-16255607 4.65e-02 71_[+4(6.01e-05)]_41 chr2L:20322101-20322221 5.20e-02 120 chrX:18505294-18505414 3.97e-01 120 chr3L:20467604-20467724 7.61e-02 69_[+2(3.12e-05)]_43 chr3R:18380612-18380732 6.48e-02 120 chr2L:2957108-2957228 1.49e-02 36_[+4(6.01e-05)]_76 chr3L:3050263-3050383 3.63e-01 120 chr2R:11192948-11193068 3.81e-03 88_[+2(5.27e-05)]_24 chr2L:6795411-6795531 3.86e-03 37_[+4(6.01e-05)]_75 chr2L:13893361-13893481 5.71e-02 120 chr3L:8952305-8952425 3.35e-01 120 chr3L:12008061-12008181 2.44e-01 120 chrX:10048019-10048139 9.86e-03 2_[+5(6.15e-06)]_54_[+5(2.02e-05)]_\ 48 chr2L:14230649-14230769 1.29e-01 120 chr2L:20840778-20840898 9.32e-04 73_[+4(9.95e-05)]_39 chrX:15121975-15122095 6.75e-02 120 chr3R:29876601-29876721 3.75e-01 120 chr2L:1903281-1903401 2.44e-03 53_[+2(3.12e-05)]_59 chr3L:7131792-7131912 9.86e-03 49_[+4(6.01e-05)]_63 chr3R:18621304-18621424 1.02e-05 12_[+4(6.01e-05)]_18_[+3(4.52e-06)]_\ 74 chr3R:15281670-15281790 8.60e-01 120 chr2L:20851716-20851836 1.66e-02 120 chr3L:13032112-13032232 3.44e-02 120 chr3R:12679021-12679141 3.30e-01 120 chr2L:4283160-4283280 7.75e-03 120 chr3R:23673235-23673355 1.79e-02 120 chr2R:9928259-9928379 1.16e-03 39_[+4(6.01e-05)]_73 chr2R:17714542-17714662 1.31e-01 120 chrX:12456009-12456129 3.54e-02 106_[+4(6.01e-05)]_6 chrX:6035484-6035604 5.65e-01 120 chr2L:268083-268203 7.88e-01 120 chr2L:3294585-3294705 9.21e-02 120 chr2R:17639000-17639120 1.90e-02 120 chr2L:267879-267999 4.26e-02 120 chrX:5085678-5085798 6.20e-06 30_[+2(7.32e-05)]_25_[+3(8.76e-06)]_\ 49 chr4:466835-466955 2.78e-02 120 chr2R:11592270-11592390 1.27e-02 120 chr3L:10088573-10088693 5.17e-01 120 chrX:7938696-7938816 6.56e-01 120 chr2R:9136690-9136810 4.41e-02 120 chr3L:10734691-10734811 1.17e-04 4_[+3(8.76e-06)]_108 chr3R:31287486-31287606 9.94e-03 120 chr3R:22487082-22487202 6.27e-02 120 chr2L:20835623-20835743 5.01e-01 120 chrX:6973382-6973502 5.47e-01 120 chr2L:11364144-11364264 4.59e-01 120 chr3R:10084536-10084656 4.57e-05 12_[+5(8.20e-05)]_[+3(1.66e-05)]_92 chr3L:12039289-12039409 8.95e-04 11_[+4(9.95e-05)]_68_[+4(6.01e-05)]_\ 13_[+1(4.05e-05)]_4 chr2R:6590420-6590540 9.30e-02 120 chr2L:16422822-16422942 2.69e-01 120 chr2L:10004684-10004804 5.06e-01 120 chr2R:23925164-23925284 9.06e-02 120 chr3L:14456414-14456534 6.96e-04 27_[+1(6.70e-05)]_24_[+2(3.12e-05)]_\ 53 chr3R:30812450-30812570 1.61e-04 120 chr3L:343008-343128 6.94e-04 84_[+2(7.32e-05)]_28 chr3L:1189017-1189137 1.01e-01 120 chr3R:19073741-19073861 2.85e-02 120 chr2R:10302938-10303058 6.94e-05 93_[+3(4.52e-06)]_19 chrX:5091765-5091885 1.32e-03 53_[+4(6.01e-05)]_5_[+1(4.05e-05)]_\ 46 chr3L:16887099-16887219 2.23e-02 120 chrX:2542306-2542426 1.46e-02 120 chr3L:18626842-18626962 6.88e-03 120 chr2L:7158953-7159073 9.40e-01 120 chr3R:4915111-4915231 1.44e-02 32_[+4(6.01e-05)]_80 chr3R:16982473-16982593 5.12e-02 120 chr3R:8008001-8008121 8.92e-03 56_[+1(4.05e-05)]_56 chr3L:4272286-4272406 1.91e-01 120 chr2L:5895341-5895461 2.76e-05 68_[+5(6.15e-06)]_44 chr2L:7890866-7890986 3.68e-01 120 chr3R:10203678-10203798 2.01e-01 120 chr2L:1738232-1738352 7.55e-01 120 chr2R:9428011-9428131 5.98e-02 120 chr3L:3814078-3814198 1.04e-01 120 chr3L:3141514-3141634 2.34e-04 24_[+4(9.95e-05)]_31_[+4(6.01e-05)]_\ 25_[+5(3.56e-05)]_16 chr3R:15091730-15091850 1.23e-01 120 chrX:12202044-12202164 7.39e-01 120 chr2L:10505307-10505427 1.84e-01 120 chr3L:8956715-8956835 1.52e-02 120 chr2R:18972442-18972562 3.19e-02 30_[+4(6.01e-05)]_82 chr3L:15073770-15073890 1.54e-01 120 chr2L:19542259-19542379 2.64e-01 120 chr2R:8174005-8174125 6.44e-04 71_[+3(4.52e-06)]_41 chrX:16655197-16655317 7.37e-01 120 chr2L:18395212-18395332 1.61e-03 31_[+1(4.05e-05)]_81 chr3L:15959056-15959176 2.04e-03 88_[+5(3.56e-05)]_24 chr2L:1142799-1142919 3.00e-03 62_[+1(6.70e-05)]_11_[+4(6.01e-05)]_\ 31 chr2L:3439680-3439800 2.00e-01 120 chr3L:14190076-14190196 1.18e-02 48_[+2(3.12e-05)]_64 chr3L:3435068-3435188 6.51e-01 120 chr3R:21154258-21154378 5.13e-02 40_[+2(3.12e-05)]_72 chr3L:20005477-20005597 6.91e-01 120 chr2L:13906050-13906170 8.29e-01 120 chrX:2707907-2708027 2.54e-03 57_[+1(4.05e-05)]_15_[+4(9.95e-05)]_\ 32 chr2L:6179114-6179234 1.11e-03 45_[+3(1.19e-05)]_67 chr2R:5653858-5653978 3.01e-01 120 chr3R:29782103-29782223 2.20e-01 120 chrX:10596088-10596208 1.13e-02 120 chr2R:16611259-16611379 8.86e-03 91_[+2(3.12e-05)]_21 chr3R:9892080-9892200 8.99e-02 120 chrX:9201205-9201325 1.03e-05 70_[+3(1.19e-05)]_42 chr2R:7759390-7759510 1.67e-01 120 chrX:2383297-2383417 3.09e-03 120 chr2L:7827880-7828000 2.42e-01 120 chr2L:9495445-9495565 4.68e-01 120 chr2R:13564808-13564928 2.07e-01 120 chr3L:9211488-9211608 8.87e-01 120 chr2L:8080780-8080900 1.39e-01 120 chrX:4172217-4172337 3.06e-01 120 chr2R:11031385-11031505 7.61e-03 22_[+1(4.05e-05)]_90 chr2L:14972989-14973109 3.55e-02 111_[+2(3.12e-05)]_1 chr3R:18785937-18786057 7.85e-01 120 chr2L:12822747-12822867 1.87e-03 34_[+5(2.02e-05)]_78 chr3L:2734445-2734565 8.92e-01 120 chr2L:6455124-6455244 7.80e-03 120 chr2L:4333887-4334007 1.98e-02 120 chr2L:2999201-2999321 5.88e-02 120 chr2L:435339-435459 7.63e-01 120 chr2R:18405557-18405677 8.05e-01 120 chr2L:3803970-3804090 1.36e-02 91_[+4(6.01e-05)]_3_[+4(6.01e-05)]_\ 10 chr3L:15089438-15089558 7.02e-02 120 chr2R:11175485-11175605 3.19e-01 120 chr2L:1723124-1723244 1.17e-03 120 chr2L:740158-740278 1.96e-01 120 chr3L:8058373-8058493 9.41e-01 120 chr2R:9541748-9541868 5.71e-01 120 chr2R:17535881-17536001 1.91e-01 120 chr3L:3873186-3873306 2.11e-01 120 chr2R:25084504-25084624 8.91e-02 106_[+4(9.95e-05)]_6 chr2L:3851470-3851590 8.87e-02 59_[+4(6.01e-05)]_53 chr2R:14481202-14481322 4.09e-02 47_[+4(6.01e-05)]_65 chr3L:6964948-6965068 7.19e-01 120 chrX:17244991-17245111 8.27e-02 72_[+5(8.20e-05)]_40 chr3L:18102189-18102309 7.59e-02 120 chr3L:1206797-1206917 1.45e-01 120 chr2R:17458313-17458433 2.38e-02 36_[+2(3.12e-05)]_76 chr3L:18227473-18227593 3.47e-01 120 chr2R:24313250-24313370 9.13e-05 110_[+5(6.15e-06)]_2 chr3L:8925800-8925920 9.14e-01 120 chr3R:27946711-27946831 3.41e-02 29_[+1(6.70e-05)]_83 chr3R:19822301-19822421 5.40e-01 120 chr2L:13021282-13021402 1.67e-02 71_[+5(6.15e-06)]_41 chr2L:19373975-19374095 3.76e-01 120 chr3L:110081-110201 7.90e-01 120 chr2L:9158470-9158590 1.91e-01 120 chr3R:6229226-6229346 4.85e-02 120 chr2R:12020633-12020753 6.96e-02 120 chr4:1199320-1199440 5.72e-01 120 chr3R:16004152-16004272 2.07e-01 120 chr2R:22403167-22403287 4.11e-01 120 chr2L:14537620-14537740 9.62e-01 120 chr2R:6636307-6636427 1.29e-01 120 chr2L:5445948-5446068 4.34e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n05.farnam.hpc.yale.internal ********************************************************************************