******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG15514.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:17105846-17105966 1.0000 120 chr4:582975-583095 1.0000 120 chr2L:321932-322052 1.0000 120 chrX:13597892-13598012 1.0000 120 chr3L:12401939-12402059 1.0000 120 chrX:15733331-15733451 1.0000 120 chr3R:19404451-19404571 1.0000 120 chrX:19494955-19495075 1.0000 120 chrX:17296422-17296542 1.0000 120 chrX:2707830-2707950 1.0000 120 chrX:2690515-2690635 1.0000 120 chr3L:21185718-21185838 1.0000 120 chr3L:7058540-7058660 1.0000 120 chr3L:7058739-7058859 1.0000 120 chr2L:18846314-18846434 1.0000 120 chr3R:30583683-30583803 1.0000 120 chr3L:4510460-4510580 1.0000 120 chr2R:15665239-15665359 1.0000 120 chr2L:10477012-10477132 1.0000 120 chrX:16325625-16325745 1.0000 120 chr3L:22274041-22274161 1.0000 120 chrX:14588648-14588768 1.0000 120 chr3L:18147735-18147855 1.0000 120 chr2R:10808883-10809003 1.0000 120 chrX:6202719-6202839 1.0000 120 chrX:23007075-23007195 1.0000 120 chr2L:11269673-11269793 1.0000 120 chr3R:9052078-9052198 1.0000 120 chr3R:10121630-10121750 1.0000 120 chrX:14266231-14266351 1.0000 120 chr2L:10687541-10687661 1.0000 120 chr2L:12579190-12579310 1.0000 120 chrX:9192583-9192703 1.0000 120 chr2L:18826748-18826868 1.0000 120 chr2L:13245960-13246080 1.0000 120 chr2R:17140898-17141018 1.0000 120 chr3L:7094687-7094807 1.0000 120 chr2R:6648003-6648123 1.0000 120 chrX:10613725-10613845 1.0000 120 chrX:1691614-1691734 1.0000 120 chr3L:17791269-17791389 1.0000 120 chr2L:6130658-6130778 1.0000 120 chr2L:21220561-21220681 1.0000 120 chr3R:19017416-19017536 1.0000 120 chr3L:1023882-1024002 1.0000 120 chr3L:19818760-19818880 1.0000 120 chr3R:22753090-22753210 1.0000 120 chr3L:10089716-10089836 1.0000 120 chr2R:19390008-19390128 1.0000 120 chr3R:25235512-25235632 1.0000 120 chr3L:4003364-4003484 1.0000 120 chrX:17039085-17039205 1.0000 120 chr2R:14912296-14912416 1.0000 120 chr2R:24162314-24162434 1.0000 120 chrX:8100495-8100615 1.0000 120 chrX:8100711-8100831 1.0000 120 chr3L:12732890-12733010 1.0000 120 chr3L:19807660-19807780 1.0000 120 chr2R:24875794-24875914 1.0000 120 chr2R:23560435-23560555 1.0000 120 chr3L:12534500-12534620 1.0000 120 chr2R:13235096-13235216 1.0000 120 chrX:16791196-16791316 1.0000 120 chr3L:5102189-5102309 1.0000 120 chrX:8460825-8460945 1.0000 120 chrX:18261654-18261774 1.0000 120 chr2R:9579387-9579507 1.0000 120 chr3L:4469154-4469274 1.0000 120 chr3L:1385992-1386112 1.0000 120 chr3L:4178335-4178455 1.0000 120 chr3L:1549750-1549870 1.0000 120 chr3L:19584655-19584775 1.0000 120 chr2L:106702-106822 1.0000 120 chr2L:9089684-9089804 1.0000 120 chr3R:19406964-19407084 1.0000 120 chr3L:868941-869061 1.0000 120 chr3L:15816374-15816494 1.0000 120 chr3L:19979807-19979927 1.0000 120 chrX:5084292-5084412 1.0000 120 chrX:5732498-5732618 1.0000 120 chr4:1023931-1024051 1.0000 120 chr2L:18846926-18847046 1.0000 120 chr3L:4440215-4440335 1.0000 120 chr3R:15249837-15249957 1.0000 120 chr4:1198786-1198906 1.0000 120 chr2R:24874864-24874984 1.0000 120 chrX:927555-927675 1.0000 120 chr2L:19755196-19755316 1.0000 120 chr2L:19364258-19364378 1.0000 120 chrX:4636227-4636347 1.0000 120 chrX:16941435-16941555 1.0000 120 chr3R:4712172-4712292 1.0000 120 chr2L:10988207-10988327 1.0000 120 chr3R:31738381-31738501 1.0000 120 chr2R:4192229-4192349 1.0000 120 chr3L:20241711-20241831 1.0000 120 chr3R:7093751-7093871 1.0000 120 chr2R:9846468-9846588 1.0000 120 chrX:12784844-12784964 1.0000 120 chr2R:9137254-9137374 1.0000 120 chr2R:11405806-11405926 1.0000 120 chrX:15117333-15117453 1.0000 120 chr2R:23851450-23851570 1.0000 120 chr2R:10049278-10049398 1.0000 120 chr3L:5561548-5561668 1.0000 120 chrX:15909674-15909794 1.0000 120 chr2R:17726499-17726619 1.0000 120 chr3R:20866349-20866469 1.0000 120 chrX:16321157-16321277 1.0000 120 chr2R:22121664-22121784 1.0000 120 chr3R:26966825-26966945 1.0000 120 chr2R:24668292-24668412 1.0000 120 chrX:1692647-1692767 1.0000 120 chrX:17657269-17657389 1.0000 120 chrX:16792039-16792159 1.0000 120 chrX:1517048-1517168 1.0000 120 chr3L:16335034-16335154 1.0000 120 chr3R:7783552-7783672 1.0000 120 chrX:14200260-14200380 1.0000 120 chr2L:3145704-3145824 1.0000 120 chr3R:6456517-6456637 1.0000 120 chr2L:9253140-9253260 1.0000 120 chr2L:18845003-18845123 1.0000 120 chr3L:11107168-11107288 1.0000 120 chr2R:4782822-4782942 1.0000 120 chr2R:16729439-16729559 1.0000 120 chr2R:12515027-12515147 1.0000 120 chr3R:21339782-21339902 1.0000 120 chr3L:4283746-4283866 1.0000 120 chr2L:21251922-21252042 1.0000 120 chr3R:10148632-10148752 1.0000 120 chr2L:2769615-2769735 1.0000 120 chr2L:18765992-18766112 1.0000 120 chrX:9220507-9220627 1.0000 120 chr3R:8984294-8984414 1.0000 120 chr2L:21104450-21104570 1.0000 120 chr3L:9075054-9075174 1.0000 120 chrX:6261033-6261153 1.0000 120 chr3R:23538822-23538942 1.0000 120 chr3L:15502443-15502563 1.0000 120 chr2L:8374356-8374476 1.0000 120 chrX:9644707-9644827 1.0000 120 chrX:2714897-2715017 1.0000 120 chr3R:28677459-28677579 1.0000 120 chr3L:690342-690462 1.0000 120 chr3L:18112893-18113013 1.0000 120 chrX:16094121-16094241 1.0000 120 chr2R:17639272-17639392 1.0000 120 chr3L:5141591-5141711 1.0000 120 chr3L:3409461-3409581 1.0000 120 chrX:8177011-8177131 1.0000 120 chr2R:7447428-7447548 1.0000 120 chr2R:22911998-22912118 1.0000 120 chr2R:17452593-17452713 1.0000 120 chr2L:94657-94777 1.0000 120 chr2R:11723737-11723857 1.0000 120 chr3L:13469328-13469448 1.0000 120 chr2L:8685965-8686085 1.0000 120 chr3L:20241504-20241624 1.0000 120 chr3R:12716968-12717088 1.0000 120 chr2R:16047392-16047512 1.0000 120 chr3R:28811876-28811996 1.0000 120 chr3L:16100187-16100307 1.0000 120 chr3R:6106866-6106986 1.0000 120 chr3R:12413696-12413816 1.0000 120 chr3L:10508118-10508238 1.0000 120 chr3R:22528622-22528742 1.0000 120 chr3R:7745451-7745571 1.0000 120 chr3L:4286947-4287067 1.0000 120 chr2R:7451663-7451783 1.0000 120 chr2R:11931071-11931191 1.0000 120 chr2L:10517224-10517344 1.0000 120 chr3L:3554053-3554173 1.0000 120 chrX:4101007-4101127 1.0000 120 chr2L:15038826-15038946 1.0000 120 chr3L:1964310-1964430 1.0000 120 chr2L:17603270-17603390 1.0000 120 chr2R:11968833-11968953 1.0000 120 chr2R:4192429-4192549 1.0000 120 chr3L:11523498-11523618 1.0000 120 chrX:5085629-5085749 1.0000 120 chr3L:8523444-8523564 1.0000 120 chrX:1375402-1375522 1.0000 120 chr3L:5565143-5565263 1.0000 120 chr3R:29993285-29993405 1.0000 120 chrX:21044543-21044663 1.0000 120 chr3R:23539034-23539154 1.0000 120 chr2L:12575244-12575364 1.0000 120 chr2R:15922491-15922611 1.0000 120 chr3L:14562777-14562897 1.0000 120 chr3L:5141792-5141912 1.0000 120 chr3R:30036804-30036924 1.0000 120 chr2R:24687320-24687440 1.0000 120 chr2L:2559521-2559641 1.0000 120 chrX:11369556-11369676 1.0000 120 chr3L:3192632-3192752 1.0000 120 chr3L:12519480-12519600 1.0000 120 chr2L:1182750-1182870 1.0000 120 chr3R:23694708-23694828 1.0000 120 chr3R:28886992-28887112 1.0000 120 chr3L:20126292-20126412 1.0000 120 chrX:15450145-15450265 1.0000 120 chr2L:11874386-11874506 1.0000 120 chrX:2713921-2714041 1.0000 120 chr2R:17419604-17419724 1.0000 120 chr2L:1186248-1186368 1.0000 120 chr3L:10089940-10090060 1.0000 120 chr3L:12537254-12537374 1.0000 120 chrX:12764762-12764882 1.0000 120 chr2R:24986038-24986158 1.0000 120 chr3R:7090133-7090253 1.0000 120 chr3R:17040563-17040683 1.0000 120 chr3R:6708471-6708591 1.0000 120 chr3R:8240486-8240606 1.0000 120 chrX:7954233-7954353 1.0000 120 chr3R:31571910-31572030 1.0000 120 chr3L:5927652-5927772 1.0000 120 chr3R:8339114-8339234 1.0000 120 chrX:625303-625423 1.0000 120 chr2L:15764177-15764297 1.0000 120 chr2R:23556177-23556297 1.0000 120 chrX:658189-658309 1.0000 120 chr3R:24148983-24149103 1.0000 120 chrX:16836114-16836234 1.0000 120 chr2R:9843684-9843804 1.0000 120 chr3R:25662025-25662145 1.0000 120 chr2L:5153023-5153143 1.0000 120 chr2L:2855302-2855422 1.0000 120 chr3R:18168014-18168134 1.0000 120 chr2R:8665713-8665833 1.0000 120 chr2L:6948790-6948910 1.0000 120 chr2L:19580386-19580506 1.0000 120 chr2L:10344344-10344464 1.0000 120 chr2L:15499492-15499612 1.0000 120 chr2L:9614062-9614182 1.0000 120 chr2R:6153101-6153221 1.0000 120 chr2R:4595219-4595339 1.0000 120 chr2R:19290719-19290839 1.0000 120 chr3L:4021358-4021478 1.0000 120 chr2L:10479939-10480059 1.0000 120 chr3R:8715871-8715991 1.0000 120 chr3R:8008058-8008178 1.0000 120 chrX:7746680-7746800 1.0000 120 chr3L:14190444-14190564 1.0000 120 chrX:13669538-13669658 1.0000 120 chr4:904756-904876 1.0000 120 chr3R:13710773-13710893 1.0000 120 chr3R:5354972-5355092 1.0000 120 chr3R:23384769-23384889 1.0000 120 chr2L:20426027-20426147 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG15514/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG15514.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.285 C 0.214 G 0.218 T 0.284 Background letter frequencies (from file dataset with add-one prior applied): A 0.285 C 0.214 G 0.218 T 0.284 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GAACYAGT MEME-1 width = 8 sites = 161 llr = 1235 E-value = 2.0e-112 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1a9::7:1 pos.-specific C :::a4:11 probability G 9::::39: matrix T ::::6::8 bits 2.2 2.0 * 1.8 ** * 1.6 ** * * Relative 1.3 **** * Entropy 1.1 ******* (11.1 bits) 0.9 ******* 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAACTAGT consensus CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:5354972-5355092 77 1.90e-05 GCACCAAAAG GAACTAGT TCGATGAGCG chrX:7746680-7746800 28 1.90e-05 TTATCGAAAG GAACTAGT TCCGAAAAGG chr3L:4021358-4021478 51 1.90e-05 CTAATACGTT GAACTAGT TCCATTCAAC chr2R:4595219-4595339 80 1.90e-05 ACTTAATAAT GAACTAGT TCTTTTGTCA chrX:16836114-16836234 64 1.90e-05 AACATTCGTA GAACTAGT TTGGTTCTCT chr3L:3192632-3192752 97 1.90e-05 GCTTAAAATG GAACTAGT TTATTCCAGA chr2R:11931071-11931191 55 1.90e-05 CCAATAGAAG GAACTAGT TCCATTTCCA chr2R:16047392-16047512 15 1.90e-05 TCAGCCGATA GAACTAGT TCTAAAGAGT chr3L:18112893-18113013 87 1.90e-05 AGTTTGCATG GAACTAGT TTGTAAGCGC chrX:9644707-9644827 74 1.90e-05 ATGATCAGCG GAACTAGT TCAGAGCCTG chrX:9220507-9220627 10 1.90e-05 CAGCAAACG GAACTAGT TCAATGTCTG chr2L:2769615-2769735 20 1.90e-05 CTCGATTTCG GAACTAGT GTTGCTGTTT chr2L:21251922-21252042 68 1.90e-05 GAGCAAAAGA GAACTAGT AGGGCTGATA chr2L:3145704-3145824 71 1.90e-05 CGTGCGAACT GAACTAGT TCCGTAACGA chr3R:26966825-26966945 35 1.90e-05 TTCATGGTGC GAACTAGT TCCGTGCAGT chr2L:19364258-19364378 1 1.90e-05 . GAACTAGT TCAAAAAACG chrX:5084292-5084412 48 1.90e-05 AAAGAAAAGA GAACTAGT TCTTTTGTTT chr3L:19979807-19979927 67 1.90e-05 CTAATCGAAT GAACTAGT AATTGGAACT chr3L:15816374-15816494 90 1.90e-05 GAGGCGAATG GAACTAGT TTCCTGGTAT chr2L:9089684-9089804 79 1.90e-05 ATAATTCAGT GAACTAGT AAAAATGTTC chr3L:1549750-1549870 60 1.90e-05 TGCATACTCG GAACTAGT TCTGCGCTGG chr3L:1385992-1386112 108 1.90e-05 AAGTGGTTCC GAACTAGT TCAGG chr3L:4469154-4469274 91 1.90e-05 AGCAGAACAC GAACTAGT AAAAAAAAAC chrX:17039085-17039205 70 1.90e-05 ATAACTCGTG GAACTAGT TCCGCTGGGA chr2R:19390008-19390128 44 1.90e-05 AAGATCCGTG GAACTAGT TCATTTGGAC chr3L:18147735-18147855 4 1.90e-05 TTG GAACTAGT TCAATTTTTT chr3L:4510460-4510580 38 1.90e-05 CAGTTTTTTG GAACTAGT AAAGAGAAGC chrX:2707830-2707950 71 1.90e-05 ATAGATTATC GAACTAGT TCCACTGCCA chrX:17296422-17296542 51 1.90e-05 TTCGGCTAAT GAACTAGT TCCCCGCGCT chr3L:12401939-12402059 74 1.90e-05 ATTGAGTTCC GAACTAGT ACTGGTTCAC chr2L:321932-322052 55 1.90e-05 TTCTATAATC GAACTAGT TCTTTGAGTT chr3R:25662025-25662145 62 3.33e-05 caagcGTATG GAACCAGT CGTGTTGTTG chr3R:8240486-8240606 70 3.33e-05 CCAACGAACC GAACCAGT TCATCGGAAC chr3R:17040563-17040683 54 3.33e-05 TGCTGAAAAG GAACCAGT TGGAACTGAC chr2R:24986038-24986158 104 3.33e-05 gtccagcgga gaaccagt cccagttcc chrX:15450145-15450265 91 3.33e-05 CAGCTGCGTG GAACCAGT TCCCATCCCT chr3L:20126292-20126412 42 3.33e-05 GCTCAACTTT GAACCAGT TCGCCAAACT chr2L:1182750-1182870 53 3.33e-05 TTTCGGCGCA GAACCAGT TCCAACATTT chr3L:4286947-4287067 45 3.33e-05 GTCGTTAAAT GAACCAGT TCCGAAATGT chr3L:13469328-13469448 34 3.33e-05 CATTATTGCG GAACCAGT TTGTTTATCG chr2L:94657-94777 27 3.33e-05 ATTAGAATCG GAACCAGT TCATCTATAC chrX:16094121-16094241 36 3.33e-05 CTCGTTTGAT GAACCAGT TCTTATTGTT chr2L:8374356-8374476 50 3.33e-05 ATTCATTCCG GAACCAGT TCGAAAGTTG chr3L:9075054-9075174 64 3.33e-05 CGAGCAGTCG GAACCAGT TGGCTTATCA chr3L:4283746-4283866 38 3.33e-05 TATAGTGTAA GAACCAGT TCAATCAAAG chr3R:4712172-4712292 42 3.33e-05 TTTTTGGGAG GAACCAGT ATCTGCTAAT chrX:5732498-5732618 54 3.33e-05 CGTGTTCCCA GAACCAGT CAGCACTTGG chr2R:24875794-24875914 50 3.33e-05 AGTTCCAGAT GAACCAGT TCATCAGTAT chr3R:25235512-25235632 76 3.33e-05 AGTCGATTCG GAACCAGT CAAAGGCGGT chrX:9192583-9192703 74 3.33e-05 ATTTCAAGTG GAACCAGT TTCGGTTCCG chr2R:10808883-10809003 82 3.33e-05 GTGCCGAAAA GAACCAGT CTATGCACAA chrX:14588648-14588768 45 3.33e-05 GAACCAGTGC GAACCAGT AAACCGGAGG chrX:16325625-16325745 44 3.33e-05 GGCGCATCTG GAACCAGT TGGCGGAGTC chr2R:15665239-15665359 29 3.33e-05 GGGTTTTGGG GAACCAGT TCAGACGAAT chr3R:19404451-19404571 40 3.33e-05 TCCGACTAGG GAACCAGT TCTTTCCCAC chrX:15733331-15733451 19 3.33e-05 CCAGATCTGT GAACCAGT TCAGATTGTC chr2R:6153101-6153221 71 4.78e-05 ATGAAATATC GAACTGGT TCCATAGCCT chr2R:15922491-15922611 65 4.78e-05 CAACCCATTT GAACTGGT TCTTTGAACC chr3L:1964310-1964430 98 4.78e-05 GGAAGTTATC GAACTGGT TCGATGGAAC chr2L:18765992-18766112 96 4.78e-05 ACGAAGTAGT GAACTGGT CGGGTGATCT chr2R:16729439-16729559 40 4.78e-05 TTGACCAGCT GAACTGGT TCTTATTTAT chr2R:22121664-22121784 45 4.78e-05 TGCCTACATG GAACTGGT ACCGAAGAGG chrX:15117333-15117453 66 4.78e-05 CTGCTCTTAA GAACTGGT TCTTTTTCTT chr4:1023931-1024051 46 4.78e-05 atatgaactg gaactggt tcacgacagt chrX:16791196-16791316 60 4.78e-05 TGCTGATCCG GAACTGGT TCCACGGAAC chr3L:12534500-12534620 4 4.78e-05 CCG GAACTGGT TCCCCTTGCC chr2L:6130658-6130778 69 4.78e-05 AAAGGCAAAG GAACTGGT TCGCGTTGAC chr3L:7094687-7094807 44 4.78e-05 CTGTTATTCG GAACTGGT TCGCGAACCG chr2L:13245960-13246080 15 4.78e-05 TAAAAATACG GAACTGGT GGCTCTCAAA chr2L:12579190-12579310 56 4.78e-05 CTGGCGTCCG GAACTGGT TCCAACTCCT chrX:19494955-19495075 31 4.78e-05 CGGCGCAGGC GAACTGGT TCCAAAACTG chrX:13597892-13598012 65 4.78e-05 tctggaactg gaactggT TCTCTGATGC chrX:17105846-17105966 67 4.78e-05 GCGTTAAAAT GAACTGGT TCGTTCCGAG chr2L:9614062-9614182 83 5.88e-05 GCGGGGTGAA GAACCGGT TCCATTTCAT chr2L:6948790-6948910 62 5.88e-05 GTTCACCGGC GAACCGGT GATTCCGAAT chr2R:23556177-23556297 47 5.88e-05 GCGCCACGCG GAAccggt tcgggttcgg chr3R:6106866-6106986 57 5.88e-05 GCATAAACCC GAACCGGT TCGCAAACTG chr2R:17639272-17639392 39 5.88e-05 CCAGTTGGGT GAACCGGT GGTTCATTAC chrX:4636227-4636347 44 5.88e-05 GGCCTATTGA GAACCGGT TCGGACGCAG chr3R:15249837-15249957 53 5.88e-05 CTCAGCCCTG GAACCGGT TCCTTTTCAC chr2R:6648003-6648123 49 5.88e-05 CCGTTACCGC GAACCGGT TCCCAGCGAG chr3R:18168014-18168134 105 7.31e-05 TTTACGCAAA GAACTAGC TTTTATCA chr2R:17419604-17419724 34 7.31e-05 AAATACTATC GAACTAGC GTGGCAATCG chrX:16941435-16941555 86 8.39e-05 TGAGTTTCCG GAACCAGC TCCGGACTTA chr2L:21220561-21220681 50 8.39e-05 TTCGGGAACT GAACCAGC CGTGTTCACC chr3L:21185718-21185838 27 8.39e-05 CTCATTTTTC GAACCAGC TCCAATCGTA chr2L:17603270-17603390 12 1.03e-04 AAAGTTCAAA GAACTAGA GTTTTGTATT chr2L:8685965-8686085 40 1.03e-04 CGCCCTGGTA GAACTAGA TTTTTGGTTG chr3L:11107168-11107288 77 1.03e-04 tccaCTGGCG GAACTAGA GCCGGATCCG chrX:16792039-16792159 52 1.03e-04 ATTGAAAATC GAACTAGA ATGCCAGCAG chr3L:5102189-5102309 93 1.03e-04 CGCAAACTTG GAACTAGA TCAAAAGAAT chr2R:19290719-19290839 110 1.17e-04 ATCATAATCG GAACCAGA ACA chr2R:22911998-22912118 77 1.17e-04 ACCCAAGAGC GAACCAGA GCCGACAAGC chr2R:9846468-9846588 76 1.17e-04 CATTCAAAAG GAACCAGA TCCGATAACC chr2R:24874864-24874984 98 1.17e-04 AAAAGAACCG GAACCAGA CAATGTCTAC chrX:8460825-8460945 59 1.17e-04 TTACGGAGCT GAACCAGA ACTAAGGGAG chrX:14266231-14266351 95 1.17e-04 GCTCGACTTG GAACCAGA GCCATTCAAA chr2L:10988207-10988327 8 1.28e-04 ACCGTGT GAACTGGC TTTCAAAATT chr2L:11269673-11269793 51 1.28e-04 CTTTTAAATT GAACTGGC TCGCGCCTAT chr3R:7090133-7090253 5 1.55e-04 TTCG GAACCGGC TCACAGAGAT chr3L:12519480-12519600 59 1.55e-04 gaaccgaacc gaaccgGC CATGTGTTAG chr3R:7745451-7745571 70 1.55e-04 CAACTGAACT GAACCGGC TGCTTCCTTA chrX:6261033-6261153 107 1.55e-04 CCATCGCTAT GAACTACT ATCCTC chr3R:7783552-7783672 78 1.55e-04 GTTCCCTTGC GAACTACT CGGACGTTCA chr2R:23851450-23851570 26 1.55e-04 CAGCTGAAAT GAACTACT ATGTTGGATC chr2L:10344344-10344464 110 1.84e-04 CCCCTAACGT GAACCACT AAA chr2R:8665713-8665833 27 1.84e-04 ATTTAAAGAT GAACCACT ATTTAAATTT chr2L:1186248-1186368 64 1.84e-04 TCGCGGATTC GAACCACT GACTAACGGT chr2L:11874386-11874506 74 1.84e-04 GGATAAACTG GAACTGGA TTTTTCGGAT chr3L:14562777-14562897 95 1.84e-04 CCATTTTCCG GAACTGGA TTCGTTCTGT chr3R:28811876-28811996 11 1.84e-04 CTAGTTCGCC GAACTGGA AAAACACTGA chr3L:20241504-20241624 22 1.84e-04 AGTGAAAAAC GAACCACT GGCTCAGGTG chr3R:8339114-8339234 15 2.24e-04 CACCTACGCA GAACTGCT GGCCATTCCC chr2R:4782822-4782942 66 2.24e-04 TTTCCAAATT GAACTAGG ATTACCCAAC chr3R:20866349-20866469 97 2.24e-04 GATCCGATTC GAACTGCT TTGCCGACCT chr2R:4192229-4192349 6 2.24e-04 TCAAT GAACTAGG TCGTTCATTT chrX:6202719-6202839 77 2.24e-04 TTACCCTATT GAACTAGG AATTTAAGCT chr4:582975-583095 59 2.24e-04 GTGACAGAGT GAACTGCT TGAAACTGGT chr3L:10089940-10090060 26 2.45e-04 AGATGTATGG GAACCGCT TTAATTGCCG chr2R:11405806-11405926 65 2.45e-04 ACCTGGTGGT GAACCAGG AGTTCGCCGG chr3L:3554053-3554173 61 2.64e-04 TGTGTTTTGC GATCTAGT CAGGGGCGTA chr2L:10517224-10517344 28 3.14e-04 CTGCTCTTAG AAACTAGT TCCTAAAATC chr3R:22528622-22528742 33 3.14e-04 GGTGGATTCG GATCCAGT TCGAAAACGA chr3R:12413696-12413816 56 3.14e-04 CTAGCAATTG AAACTAGT TCCGCAGAGC chrX:15909674-15909794 20 3.14e-04 TGGCAGAAAA AAACTAGT TCAGCATGCC chr2R:9137254-9137374 44 3.14e-04 TCGTCTAGTG GATCCAGT TCCAGTTCCC chr2L:18846926-18847046 6 3.14e-04 GTGTG GAACTGGG AGGGGTGGGG chr3L:1023882-1024002 7 3.14e-04 GCGGAA AAACTAGT TCAGCTGGCC chr3R:21339782-21339902 81 3.42e-04 cggggctccg gaaccggg agcgaacccg chr2L:10477012-10477132 10 3.42e-04 GGCTTTGAA AAACCAGT AAGTTCCGTG chr3R:30036804-30036924 88 3.56e-04 TCGACGATGT GATCTGGT TCAATTTCCA chr3L:15502443-15502563 66 4.26e-04 TAATAAGTGT AAACTGGT TTTTTTTTTC chr3R:8984294-8984414 58 4.26e-04 AATTGTTATC GAATTAGT TCGTACCGTC chr3R:19017416-19017536 71 4.26e-04 ACTGAGGGTG AAACTGGT TCCGGGCAAA chr3R:31738381-31738501 82 4.70e-04 CTCTAGGTCG GAATCAGT TCAGCTCCGT chr2R:17140898-17141018 56 4.70e-04 TCGATGGAAT GAATCAGT TCCAAATTAT chrX:1375402-1375522 35 4.84e-04 CGCCACTGCG GAACTACC TGGCATCACT chrX:21044543-21044663 31 5.39e-04 AGTTCTTGAT GAATTGGT TCTTAATAAA chr2R:4192429-4192549 16 5.39e-04 tataAGGACA GACCTAgt tcgttcgttc chr3R:12716968-12717088 60 5.39e-04 TCACAAAAAT GAGCTGGT TCATATTTTT chr2L:18845003-18845123 40 5.39e-04 GTGGCTCTCT GAGCTGGT TCCGTGAACT chr2L:18846314-18846434 63 5.39e-04 TTCACCATCT GAATTGGT TCAATTGAAC chr3R:8008058-8008178 28 6.16e-04 AAGAAGCTAC GACCCAGT CACCGGCCCA chr3L:7058739-7058859 21 6.16e-04 GGTTCGTCGT GAACTATT TATCGCATCA chr3R:23694708-23694828 84 6.49e-04 GCGAGCACTC GAACCATT ATCTTGATAA chr3R:31571910-31572030 17 6.78e-04 AAGTGAATCT CAACTAGT TCCTTTTCAA chr3L:19807660-19807780 74 6.78e-04 ACGTTCAATT CAACTAGT TCGCATTCCA chr2L:21104450-21104570 46 7.96e-04 TTCATTTTCC GAACCAAT AACCGGTCTA chr2R:14912296-14912416 57 7.96e-04 ATCTGTTGGC GAACTGCA AACGTTTCGG chrX:1691614-1691734 56 7.96e-04 gctggatctg gaactgca tgcggatctg chr2L:20426027-20426147 30 8.36e-04 GGCATTGGCC GAACCGTT CACAATGGAC chr2L:18826748-18826868 55 8.36e-04 GACCGTTCCG GATCTAGC TCTATCTCCC chr3L:4440215-4440335 73 9.57e-04 CTCACGCATG AAACCAGC TCTCAGTTCG chr2R:7447428-7447548 47 1.02e-03 GGTCAGCACC GAACCGAT ATATAATGTT chrX:2714897-2715017 56 1.02e-03 CCAGGACTGG AAACTAGA GGACCATGAC chr2L:10479939-10480059 57 1.07e-03 AAATTGAATT GATCTGGC AACGCTAAGT chr2R:9843684-9843804 79 1.07e-03 TCTCCAAATC GATCTGGC AACCCTTGAG chr3L:17791269-17791389 68 1.15e-03 gccggtgccg gtaccagt tccagttcca chr3L:4178335-4178455 90 1.28e-03 GACAGGGATG GAGCCAGC TCAACAAACG chr2L:19755196-19755316 96 1.45e-03 CGGTGgaacc gaatcaga atccgaattc chr2L:10687541-10687661 89 1.69e-03 TTATTAGCGG TAACTGGT TAGATATTAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:5354972-5355092 1.9e-05 76_[+1]_36 chrX:7746680-7746800 1.9e-05 27_[+1]_85 chr3L:4021358-4021478 1.9e-05 50_[+1]_62 chr2R:4595219-4595339 1.9e-05 79_[+1]_33 chrX:16836114-16836234 1.9e-05 63_[+1]_49 chr3L:3192632-3192752 1.9e-05 96_[+1]_16 chr2R:11931071-11931191 1.9e-05 54_[+1]_58 chr2R:16047392-16047512 1.9e-05 14_[+1]_98 chr3L:18112893-18113013 1.9e-05 86_[+1]_26 chrX:9644707-9644827 1.9e-05 73_[+1]_39 chrX:9220507-9220627 1.9e-05 9_[+1]_103 chr2L:2769615-2769735 1.9e-05 19_[+1]_93 chr2L:21251922-21252042 1.9e-05 67_[+1]_45 chr2L:3145704-3145824 1.9e-05 70_[+1]_42 chr3R:26966825-26966945 1.9e-05 34_[+1]_78 chr2L:19364258-19364378 1.9e-05 [+1]_112 chrX:5084292-5084412 1.9e-05 47_[+1]_65 chr3L:19979807-19979927 1.9e-05 66_[+1]_46 chr3L:15816374-15816494 1.9e-05 89_[+1]_23 chr2L:9089684-9089804 1.9e-05 78_[+1]_34 chr3L:1549750-1549870 1.9e-05 59_[+1]_53 chr3L:1385992-1386112 1.9e-05 107_[+1]_5 chr3L:4469154-4469274 1.9e-05 90_[+1]_22 chrX:17039085-17039205 1.9e-05 69_[+1]_43 chr2R:19390008-19390128 1.9e-05 43_[+1]_69 chr3L:18147735-18147855 1.9e-05 3_[+1]_109 chr3L:4510460-4510580 1.9e-05 37_[+1]_75 chrX:2707830-2707950 1.9e-05 70_[+1]_42 chrX:17296422-17296542 1.9e-05 50_[+1]_62 chr3L:12401939-12402059 1.9e-05 73_[+1]_39 chr2L:321932-322052 1.9e-05 54_[+1]_58 chr3R:25662025-25662145 3.3e-05 61_[+1]_51 chr3R:8240486-8240606 3.3e-05 69_[+1]_43 chr3R:17040563-17040683 3.3e-05 53_[+1]_59 chr2R:24986038-24986158 3.3e-05 103_[+1]_9 chrX:15450145-15450265 3.3e-05 90_[+1]_22 chr3L:20126292-20126412 3.3e-05 41_[+1]_71 chr2L:1182750-1182870 3.3e-05 52_[+1]_60 chr3L:4286947-4287067 3.3e-05 44_[+1]_68 chr3L:13469328-13469448 3.3e-05 33_[+1]_79 chr2L:94657-94777 3.3e-05 26_[+1]_86 chrX:16094121-16094241 3.3e-05 35_[+1]_77 chr2L:8374356-8374476 3.3e-05 49_[+1]_63 chr3L:9075054-9075174 3.3e-05 63_[+1]_49 chr3L:4283746-4283866 3.3e-05 37_[+1]_75 chr3R:4712172-4712292 3.3e-05 41_[+1]_71 chrX:5732498-5732618 3.3e-05 53_[+1]_59 chr2R:24875794-24875914 3.3e-05 49_[+1]_63 chr3R:25235512-25235632 3.3e-05 75_[+1]_37 chrX:9192583-9192703 3.3e-05 73_[+1]_39 chr2R:10808883-10809003 3.3e-05 81_[+1]_31 chrX:14588648-14588768 3.3e-05 44_[+1]_68 chrX:16325625-16325745 3.3e-05 43_[+1]_69 chr2R:15665239-15665359 3.3e-05 28_[+1]_84 chr3R:19404451-19404571 3.3e-05 39_[+1]_73 chrX:15733331-15733451 3.3e-05 18_[+1]_94 chr2R:6153101-6153221 4.8e-05 70_[+1]_42 chr2R:15922491-15922611 4.8e-05 64_[+1]_48 chr3L:1964310-1964430 4.8e-05 97_[+1]_15 chr2L:18765992-18766112 4.8e-05 95_[+1]_17 chr2R:16729439-16729559 4.8e-05 39_[+1]_73 chr2R:22121664-22121784 4.8e-05 44_[+1]_68 chrX:15117333-15117453 4.8e-05 65_[+1]_47 chr4:1023931-1024051 4.8e-05 45_[+1]_67 chrX:16791196-16791316 4.8e-05 59_[+1]_53 chr3L:12534500-12534620 4.8e-05 3_[+1]_109 chr2L:6130658-6130778 4.8e-05 68_[+1]_44 chr3L:7094687-7094807 4.8e-05 43_[+1]_69 chr2L:13245960-13246080 4.8e-05 14_[+1]_98 chr2L:12579190-12579310 4.8e-05 55_[+1]_57 chrX:19494955-19495075 4.8e-05 30_[+1]_82 chrX:13597892-13598012 4.8e-05 64_[+1]_48 chrX:17105846-17105966 4.8e-05 66_[+1]_46 chr2L:9614062-9614182 5.9e-05 82_[+1]_30 chr2L:6948790-6948910 5.9e-05 61_[+1]_51 chr2R:23556177-23556297 5.9e-05 46_[+1]_66 chr3R:6106866-6106986 5.9e-05 56_[+1]_56 chr2R:17639272-17639392 5.9e-05 38_[+1]_74 chrX:4636227-4636347 5.9e-05 43_[+1]_69 chr3R:15249837-15249957 5.9e-05 52_[+1]_60 chr2R:6648003-6648123 5.9e-05 48_[+1]_64 chr3R:18168014-18168134 7.3e-05 104_[+1]_8 chr2R:17419604-17419724 7.3e-05 33_[+1]_79 chrX:16941435-16941555 8.4e-05 85_[+1]_27 chr2L:21220561-21220681 8.4e-05 49_[+1]_63 chr3L:21185718-21185838 8.4e-05 26_[+1]_86 chr2L:17603270-17603390 0.0001 11_[+1]_101 chr2L:8685965-8686085 0.0001 39_[+1]_73 chr3L:11107168-11107288 0.0001 76_[+1]_36 chrX:16792039-16792159 0.0001 51_[+1]_61 chr3L:5102189-5102309 0.0001 92_[+1]_20 chr2R:19290719-19290839 0.00012 109_[+1]_3 chr2R:22911998-22912118 0.00012 76_[+1]_36 chr2R:9846468-9846588 0.00012 75_[+1]_37 chr2R:24874864-24874984 0.00012 97_[+1]_15 chrX:8460825-8460945 0.00012 58_[+1]_54 chrX:14266231-14266351 0.00012 94_[+1]_18 chr2L:10988207-10988327 0.00013 7_[+1]_105 chr2L:11269673-11269793 0.00013 50_[+1]_62 chr3R:7090133-7090253 0.00016 4_[+1]_108 chr3L:12519480-12519600 0.00016 58_[+1]_54 chr3R:7745451-7745571 0.00016 69_[+1]_43 chrX:6261033-6261153 0.00016 106_[+1]_6 chr3R:7783552-7783672 0.00016 77_[+1]_35 chr2R:23851450-23851570 0.00016 25_[+1]_87 chr2L:10344344-10344464 0.00018 109_[+1]_3 chr2R:8665713-8665833 0.00018 26_[+1]_86 chr2L:1186248-1186368 0.00018 63_[+1]_49 chr2L:11874386-11874506 0.00018 73_[+1]_39 chr3L:14562777-14562897 0.00018 94_[+1]_18 chr3R:28811876-28811996 0.00018 10_[+1]_102 chr3L:20241504-20241624 0.00018 21_[+1]_91 chr3R:8339114-8339234 0.00022 14_[+1]_98 chr2R:4782822-4782942 0.00022 65_[+1]_47 chr3R:20866349-20866469 0.00022 96_[+1]_16 chr2R:4192229-4192349 0.00022 5_[+1]_107 chrX:6202719-6202839 0.00022 76_[+1]_36 chr4:582975-583095 0.00022 58_[+1]_54 chr3L:10089940-10090060 0.00025 25_[+1]_87 chr2R:11405806-11405926 0.00025 64_[+1]_48 chr3L:3554053-3554173 0.00026 60_[+1]_52 chr2L:10517224-10517344 0.00031 27_[+1]_85 chr3R:22528622-22528742 0.00031 32_[+1]_80 chr3R:12413696-12413816 0.00031 55_[+1]_57 chrX:15909674-15909794 0.00031 19_[+1]_93 chr2R:9137254-9137374 0.00031 43_[+1]_69 chr2L:18846926-18847046 0.00031 5_[+1]_107 chr3L:1023882-1024002 0.00031 6_[+1]_106 chr3R:21339782-21339902 0.00034 80_[+1]_32 chr2L:10477012-10477132 0.00034 9_[+1]_103 chr3R:30036804-30036924 0.00036 87_[+1]_25 chr3L:15502443-15502563 0.00043 65_[+1]_47 chr3R:8984294-8984414 0.00043 57_[+1]_55 chr3R:19017416-19017536 0.00043 70_[+1]_42 chr3R:31738381-31738501 0.00047 81_[+1]_31 chr2R:17140898-17141018 0.00047 55_[+1]_57 chrX:1375402-1375522 0.00048 34_[+1]_78 chrX:21044543-21044663 0.00054 30_[+1]_82 chr2R:4192429-4192549 0.00054 15_[+1]_97 chr3R:12716968-12717088 0.00054 59_[+1]_53 chr2L:18845003-18845123 0.00054 39_[+1]_73 chr2L:18846314-18846434 0.00054 62_[+1]_50 chr3R:8008058-8008178 0.00062 27_[+1]_85 chr3L:7058739-7058859 0.00062 20_[+1]_92 chr3R:23694708-23694828 0.00065 83_[+1]_29 chr3R:31571910-31572030 0.00068 16_[+1]_96 chr3L:19807660-19807780 0.00068 73_[+1]_39 chr2L:21104450-21104570 0.0008 45_[+1]_67 chr2R:14912296-14912416 0.0008 56_[+1]_56 chrX:1691614-1691734 0.0008 55_[+1]_57 chr2L:20426027-20426147 0.00084 29_[+1]_83 chr2L:18826748-18826868 0.00084 54_[+1]_58 chr3L:4440215-4440335 0.00096 72_[+1]_40 chr2R:7447428-7447548 0.001 46_[+1]_66 chrX:2714897-2715017 0.001 55_[+1]_57 chr2L:10479939-10480059 0.0011 56_[+1]_56 chr2R:9843684-9843804 0.0011 78_[+1]_34 chr3L:17791269-17791389 0.0012 67_[+1]_45 chr3L:4178335-4178455 0.0013 89_[+1]_23 chr2L:19755196-19755316 0.0015 95_[+1]_17 chr2L:10687541-10687661 0.0017 88_[+1]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAACYAGT width=8 seqs=161 chr3R:5354972-5355092 ( 77) GAACTAGT 1 chrX:7746680-7746800 ( 28) GAACTAGT 1 chr3L:4021358-4021478 ( 51) GAACTAGT 1 chr2R:4595219-4595339 ( 80) GAACTAGT 1 chrX:16836114-16836234 ( 64) GAACTAGT 1 chr3L:3192632-3192752 ( 97) GAACTAGT 1 chr2R:11931071-11931191 ( 55) GAACTAGT 1 chr2R:16047392-16047512 ( 15) GAACTAGT 1 chr3L:18112893-18113013 ( 87) GAACTAGT 1 chrX:9644707-9644827 ( 74) GAACTAGT 1 chrX:9220507-9220627 ( 10) GAACTAGT 1 chr2L:2769615-2769735 ( 20) GAACTAGT 1 chr2L:21251922-21252042 ( 68) GAACTAGT 1 chr2L:3145704-3145824 ( 71) GAACTAGT 1 chr3R:26966825-26966945 ( 35) GAACTAGT 1 chr2L:19364258-19364378 ( 1) GAACTAGT 1 chrX:5084292-5084412 ( 48) GAACTAGT 1 chr3L:19979807-19979927 ( 67) GAACTAGT 1 chr3L:15816374-15816494 ( 90) GAACTAGT 1 chr2L:9089684-9089804 ( 79) GAACTAGT 1 chr3L:1549750-1549870 ( 60) GAACTAGT 1 chr3L:1385992-1386112 ( 108) GAACTAGT 1 chr3L:4469154-4469274 ( 91) GAACTAGT 1 chrX:17039085-17039205 ( 70) GAACTAGT 1 chr2R:19390008-19390128 ( 44) GAACTAGT 1 chr3L:18147735-18147855 ( 4) GAACTAGT 1 chr3L:4510460-4510580 ( 38) GAACTAGT 1 chrX:2707830-2707950 ( 71) GAACTAGT 1 chrX:17296422-17296542 ( 51) GAACTAGT 1 chr3L:12401939-12402059 ( 74) GAACTAGT 1 chr2L:321932-322052 ( 55) GAACTAGT 1 chr3R:25662025-25662145 ( 62) GAACCAGT 1 chr3R:8240486-8240606 ( 70) GAACCAGT 1 chr3R:17040563-17040683 ( 54) GAACCAGT 1 chr2R:24986038-24986158 ( 104) GAACCAGT 1 chrX:15450145-15450265 ( 91) GAACCAGT 1 chr3L:20126292-20126412 ( 42) GAACCAGT 1 chr2L:1182750-1182870 ( 53) GAACCAGT 1 chr3L:4286947-4287067 ( 45) GAACCAGT 1 chr3L:13469328-13469448 ( 34) GAACCAGT 1 chr2L:94657-94777 ( 27) GAACCAGT 1 chrX:16094121-16094241 ( 36) GAACCAGT 1 chr2L:8374356-8374476 ( 50) GAACCAGT 1 chr3L:9075054-9075174 ( 64) GAACCAGT 1 chr3L:4283746-4283866 ( 38) GAACCAGT 1 chr3R:4712172-4712292 ( 42) GAACCAGT 1 chrX:5732498-5732618 ( 54) GAACCAGT 1 chr2R:24875794-24875914 ( 50) GAACCAGT 1 chr3R:25235512-25235632 ( 76) GAACCAGT 1 chrX:9192583-9192703 ( 74) GAACCAGT 1 chr2R:10808883-10809003 ( 82) GAACCAGT 1 chrX:14588648-14588768 ( 45) GAACCAGT 1 chrX:16325625-16325745 ( 44) GAACCAGT 1 chr2R:15665239-15665359 ( 29) GAACCAGT 1 chr3R:19404451-19404571 ( 40) GAACCAGT 1 chrX:15733331-15733451 ( 19) GAACCAGT 1 chr2R:6153101-6153221 ( 71) GAACTGGT 1 chr2R:15922491-15922611 ( 65) GAACTGGT 1 chr3L:1964310-1964430 ( 98) GAACTGGT 1 chr2L:18765992-18766112 ( 96) GAACTGGT 1 chr2R:16729439-16729559 ( 40) GAACTGGT 1 chr2R:22121664-22121784 ( 45) GAACTGGT 1 chrX:15117333-15117453 ( 66) GAACTGGT 1 chr4:1023931-1024051 ( 46) GAACTGGT 1 chrX:16791196-16791316 ( 60) GAACTGGT 1 chr3L:12534500-12534620 ( 4) GAACTGGT 1 chr2L:6130658-6130778 ( 69) GAACTGGT 1 chr3L:7094687-7094807 ( 44) GAACTGGT 1 chr2L:13245960-13246080 ( 15) GAACTGGT 1 chr2L:12579190-12579310 ( 56) GAACTGGT 1 chrX:19494955-19495075 ( 31) GAACTGGT 1 chrX:13597892-13598012 ( 65) GAACTGGT 1 chrX:17105846-17105966 ( 67) GAACTGGT 1 chr2L:9614062-9614182 ( 83) GAACCGGT 1 chr2L:6948790-6948910 ( 62) GAACCGGT 1 chr2R:23556177-23556297 ( 47) GAACCGGT 1 chr3R:6106866-6106986 ( 57) GAACCGGT 1 chr2R:17639272-17639392 ( 39) GAACCGGT 1 chrX:4636227-4636347 ( 44) GAACCGGT 1 chr3R:15249837-15249957 ( 53) GAACCGGT 1 chr2R:6648003-6648123 ( 49) GAACCGGT 1 chr3R:18168014-18168134 ( 105) GAACTAGC 1 chr2R:17419604-17419724 ( 34) GAACTAGC 1 chrX:16941435-16941555 ( 86) GAACCAGC 1 chr2L:21220561-21220681 ( 50) GAACCAGC 1 chr3L:21185718-21185838 ( 27) GAACCAGC 1 chr2L:17603270-17603390 ( 12) GAACTAGA 1 chr2L:8685965-8686085 ( 40) GAACTAGA 1 chr3L:11107168-11107288 ( 77) GAACTAGA 1 chrX:16792039-16792159 ( 52) GAACTAGA 1 chr3L:5102189-5102309 ( 93) GAACTAGA 1 chr2R:19290719-19290839 ( 110) GAACCAGA 1 chr2R:22911998-22912118 ( 77) GAACCAGA 1 chr2R:9846468-9846588 ( 76) GAACCAGA 1 chr2R:24874864-24874984 ( 98) GAACCAGA 1 chrX:8460825-8460945 ( 59) GAACCAGA 1 chrX:14266231-14266351 ( 95) GAACCAGA 1 chr2L:10988207-10988327 ( 8) GAACTGGC 1 chr2L:11269673-11269793 ( 51) GAACTGGC 1 chr3R:7090133-7090253 ( 5) GAACCGGC 1 chr3L:12519480-12519600 ( 59) GAACCGGC 1 chr3R:7745451-7745571 ( 70) GAACCGGC 1 chrX:6261033-6261153 ( 107) GAACTACT 1 chr3R:7783552-7783672 ( 78) GAACTACT 1 chr2R:23851450-23851570 ( 26) GAACTACT 1 chr2L:10344344-10344464 ( 110) GAACCACT 1 chr2R:8665713-8665833 ( 27) GAACCACT 1 chr2L:1186248-1186368 ( 64) GAACCACT 1 chr2L:11874386-11874506 ( 74) GAACTGGA 1 chr3L:14562777-14562897 ( 95) GAACTGGA 1 chr3R:28811876-28811996 ( 11) GAACTGGA 1 chr3L:20241504-20241624 ( 22) GAACCACT 1 chr3R:8339114-8339234 ( 15) GAACTGCT 1 chr2R:4782822-4782942 ( 66) GAACTAGG 1 chr3R:20866349-20866469 ( 97) GAACTGCT 1 chr2R:4192229-4192349 ( 6) GAACTAGG 1 chrX:6202719-6202839 ( 77) GAACTAGG 1 chr4:582975-583095 ( 59) GAACTGCT 1 chr3L:10089940-10090060 ( 26) GAACCGCT 1 chr2R:11405806-11405926 ( 65) GAACCAGG 1 chr3L:3554053-3554173 ( 61) GATCTAGT 1 chr2L:10517224-10517344 ( 28) AAACTAGT 1 chr3R:22528622-22528742 ( 33) GATCCAGT 1 chr3R:12413696-12413816 ( 56) AAACTAGT 1 chrX:15909674-15909794 ( 20) AAACTAGT 1 chr2R:9137254-9137374 ( 44) GATCCAGT 1 chr2L:18846926-18847046 ( 6) GAACTGGG 1 chr3L:1023882-1024002 ( 7) AAACTAGT 1 chr3R:21339782-21339902 ( 81) GAACCGGG 1 chr2L:10477012-10477132 ( 10) AAACCAGT 1 chr3R:30036804-30036924 ( 88) GATCTGGT 1 chr3L:15502443-15502563 ( 66) AAACTGGT 1 chr3R:8984294-8984414 ( 58) GAATTAGT 1 chr3R:19017416-19017536 ( 71) AAACTGGT 1 chr3R:31738381-31738501 ( 82) GAATCAGT 1 chr2R:17140898-17141018 ( 56) GAATCAGT 1 chrX:1375402-1375522 ( 35) GAACTACC 1 chrX:21044543-21044663 ( 31) GAATTGGT 1 chr2R:4192429-4192549 ( 16) GACCTAGT 1 chr3R:12716968-12717088 ( 60) GAGCTGGT 1 chr2L:18845003-18845123 ( 40) GAGCTGGT 1 chr2L:18846314-18846434 ( 63) GAATTGGT 1 chr3R:8008058-8008178 ( 28) GACCCAGT 1 chr3L:7058739-7058859 ( 21) GAACTATT 1 chr3R:23694708-23694828 ( 84) GAACCATT 1 chr3R:31571910-31572030 ( 17) CAACTAGT 1 chr3L:19807660-19807780 ( 74) CAACTAGT 1 chr2L:21104450-21104570 ( 46) GAACCAAT 1 chr2R:14912296-14912416 ( 57) GAACTGCA 1 chrX:1691614-1691734 ( 56) GAACTGCA 1 chr2L:20426027-20426147 ( 30) GAACCGTT 1 chr2L:18826748-18826868 ( 55) GATCTAGC 1 chr3L:4440215-4440335 ( 73) AAACCAGC 1 chr2R:7447428-7447548 ( 47) GAACCGAT 1 chrX:2714897-2715017 ( 56) AAACTAGA 1 chr2L:10479939-10480059 ( 57) GATCTGGC 1 chr2R:9843684-9843804 ( 79) GATCTGGC 1 chr3L:17791269-17791389 ( 68) GTACCAGT 1 chr3L:4178335-4178455 ( 90) GAGCCAGC 1 chr2L:19755196-19755316 ( 96) GAATCAGA 1 chr2L:10687541-10687661 ( 89) TAACTGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.70654 E= 2.0e-112 -235 -410 209 -551 180 -1397 -1397 -551 170 -410 -355 -270 -1397 217 -1397 -293 -1397 94 -1397 106 124 -1397 59 -1397 -452 -130 202 -393 -135 -110 -255 141 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 161 E= 2.0e-112 0.055901 0.012422 0.925466 0.006211 0.993789 0.000000 0.000000 0.006211 0.925466 0.012422 0.018634 0.043478 0.000000 0.962733 0.000000 0.037267 0.000000 0.409938 0.000000 0.590062 0.670807 0.000000 0.329193 0.000000 0.012422 0.086957 0.881988 0.018634 0.111801 0.099379 0.037267 0.751553 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACYAGT MEME-1 regular expression -------------------------------------------------------------------------------- GAAC[TC][AG]GT -------------------------------------------------------------------------------- Time 9.15 secs. ******************************************************************************** ******************************************************************************** MOTIF CTRGTTCC MEME-2 width = 8 sites = 54 llr = 463 E-value = 7.7e-017 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::4::::2 pos.-specific C 72::::a6 probability G 3:6a:::2 matrix T :8::aa:: bits 2.2 * * 2.0 * * 1.8 **** 1.6 **** Relative 1.3 * **** Entropy 1.1 ******* (12.4 bits) 0.9 ******* 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGGTTCC consensus GCA G sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2L:15499492-15499612 48 1.07e-05 GGTTCCATAG CTGGTTCC ATTCACCCTC chr2R:23556177-23556297 74 1.07e-05 gggttcgttg ctggttcc ggttcaagtt chr3L:12519480-12519600 92 1.07e-05 GTGTAAATGG CTGGTTCC AACGCCTTGC chr2L:8374356-8374476 23 1.07e-05 AATCTGGTTG CTGGTTCC GCTCTTGCAA chr2L:18765992-18766112 112 1.07e-05 GTCGGGTGAT CTGGTTCC A chr3L:868941-869061 39 1.07e-05 CTTTCGGGGG CTGGTTCC GCTCCGGATT chrX:10613725-10613845 34 1.07e-05 GAGCATGCTC CTGGTTCC AGTTCCATCA chr2L:11269673-11269793 72 1.07e-05 CGCCTATTTA CTGGTTCC GTATTTCGAT chr2R:10808883-10809003 100 1.07e-05 CTATGCACAA CTGGTTCC GAAGAGCAGC chr4:582975-583095 72 1.07e-05 CTGCTTGAAA CTGGTTCC ACTGAACTAA chr3L:5565143-5565263 37 2.46e-05 CGCGCAATCA CTAGTTCC AACATATCGG chr2R:17452593-17452713 89 2.46e-05 TGACAAGATA CTAGTTCC AATTGTTTCA chr3L:7058739-7058859 9 3.55e-05 AGCTACCA CTGGTTCG TCGTGAACTA chrX:7954233-7954353 43 5.44e-05 ggttcaggtt ccggttcc ggttccagtt chr3R:6708471-6708591 86 5.44e-05 GTACCCACCA CCGGTTCC GGCGGCCCCA chr3R:28886992-28887112 10 5.44e-05 gttccagtt ccggttcc ggttgcgtgg chr3L:4286947-4287067 93 5.44e-05 CTGGTAAGTT CCGGTTCC ACGGACAGCT chr2R:11723737-11723857 69 5.44e-05 GGCGCTTCGA GTGGTTCC AGTTCCAGTT chr3L:16335034-16335154 108 5.44e-05 AAGGCCCCTA GTGGTTCC ATAAC chrX:4636227-4636347 80 5.44e-05 AACGATGCAA CCGGTTCC GGTTGTCTGT chr3R:19406964-19407084 19 5.44e-05 AAAGCTAGCA GTGGTTCC AAAACGACAG chr3L:1385992-1386112 100 5.44e-05 TGCTCATAAA GTGGTTCC GAACTAGTTC chr2L:6948790-6948910 31 8.28e-05 AACCGCGACG CTGGTTCA GATGCATTGC chr2L:5153023-5153143 27 8.28e-05 GAGCAATTCA CTAGTTCG ATATTTGTTG chr3L:3554053-3554173 3 8.28e-05 AA CTAGTTCG GCGAACAGCT chr3R:28811876-28811996 1 8.28e-05 . CTAGTTCG CCGAACTGGA chr3L:20241504-20241624 73 8.28e-05 CATCGGTTCA CTAGTTCG CGCGCCGAGT chr2R:7447428-7447548 100 8.28e-05 TCACAAGCAG CTGGTTCA AAATTGTCAT chr2L:21104450-21104570 32 8.28e-05 CCGTGTAAGA CTGGTTCA TTTTCCGAAC chrX:16792039-16792159 11 8.28e-05 AAATAAGTGA CTGGTTCA CCAGGATCAG chrX:17657269-17657389 88 8.28e-05 CCTTCTCGCG CTGGTTCA CTTCGTTCAC chr3R:26966825-26966945 21 8.28e-05 AAATCAACGA CTGGTTCA TGGTGCGAAC chr2R:23851450-23851570 46 8.28e-05 GTTGGATCTT CTAGTTCG ATCTTCAAGA chrX:5732498-5732618 38 8.28e-05 TCGTCAAGAT CTAGTTCG TGTTCCCAGA chr3R:10121630-10121750 83 8.28e-05 CATAGAACTC CTAGTTCG ATTAAGTTTG chr3L:12401939-12402059 83 8.28e-05 CGAACTAGTA CTGGTTCA CGTTCGATAC chr2R:24986038-24986158 113 1.08e-04 agaaccagtc ccagttcc chr3L:8523444-8523564 39 1.08e-04 TGGTGGCAAA GTAGTTCC GATCGACTGA chr2R:7451663-7451783 81 1.08e-04 AGTTCCAGTT GTAGTTCC AGATACAGTG chr3L:11107168-11107288 20 1.08e-04 agttcccgtg ccagttcc cgtgccagtt chr2R:9137254-9137374 53 1.08e-04 GGATCCAGTT CCAGTTCC CGTGTAGTAC chr4:1198786-1198906 97 1.08e-04 GTATTCATTA GTAGTTCC GAATCTTTAA chr2R:9579387-9579507 47 1.08e-04 TATGGCCACA GTAGTTCC AACCGCGAGT chr2R:24875794-24875914 38 1.08e-04 ACTCAGATGT GTAGTTCC AGATGAACCA chr3L:17791269-17791389 77 1.08e-04 ggtaccagtt ccagttcc agtgcctgtc chr2R:4782822-4782942 21 1.26e-04 AATGAACGAC CTAGTTCA TTGATTTTTA chr3L:19979807-19979927 95 1.26e-04 AGCAGTAAAA CTAGTTCA CAACTAGGCG chr3L:4469154-4469274 8 1.45e-04 TACATTC GTGGTTCG TGTCCCGGCT chr2L:10477012-10477132 64 1.45e-04 GCGCGAATCA GTGGTTCG CGCGCTTATC chr3L:14190444-14190564 26 2.04e-04 AAGTCGCTTA GTAGTTCG ATAGGTCTTA chr3R:12716968-12717088 98 2.04e-04 TCTGGCGCGA CCAGTTCG ATCATCATCA chrX:8177011-8177131 5 2.04e-04 GGTT CCAGTTCG TTGGCATAAT chr3L:18112893-18113013 11 2.04e-04 ATATTTGTTG GTGGTTCA GCTTATCGTT chr3L:4440215-4440335 28 2.04e-04 CGGTGCTCGA GTGGTTCA GCTAGCAAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:15499492-15499612 1.1e-05 47_[+2]_65 chr2R:23556177-23556297 1.1e-05 73_[+2]_39 chr3L:12519480-12519600 1.1e-05 91_[+2]_21 chr2L:8374356-8374476 1.1e-05 22_[+2]_90 chr2L:18765992-18766112 1.1e-05 111_[+2]_1 chr3L:868941-869061 1.1e-05 38_[+2]_74 chrX:10613725-10613845 1.1e-05 33_[+2]_79 chr2L:11269673-11269793 1.1e-05 71_[+2]_41 chr2R:10808883-10809003 1.1e-05 99_[+2]_13 chr4:582975-583095 1.1e-05 71_[+2]_41 chr3L:5565143-5565263 2.5e-05 36_[+2]_76 chr2R:17452593-17452713 2.5e-05 88_[+2]_24 chr3L:7058739-7058859 3.5e-05 8_[+2]_104 chrX:7954233-7954353 5.4e-05 42_[+2]_70 chr3R:6708471-6708591 5.4e-05 85_[+2]_27 chr3R:28886992-28887112 5.4e-05 9_[+2]_103 chr3L:4286947-4287067 5.4e-05 92_[+2]_20 chr2R:11723737-11723857 5.4e-05 68_[+2]_44 chr3L:16335034-16335154 5.4e-05 107_[+2]_5 chrX:4636227-4636347 5.4e-05 79_[+2]_33 chr3R:19406964-19407084 5.4e-05 18_[+2]_94 chr3L:1385992-1386112 5.4e-05 99_[+2]_13 chr2L:6948790-6948910 8.3e-05 30_[+2]_82 chr2L:5153023-5153143 8.3e-05 26_[+2]_86 chr3L:3554053-3554173 8.3e-05 2_[+2]_110 chr3R:28811876-28811996 8.3e-05 [+2]_112 chr3L:20241504-20241624 8.3e-05 72_[+2]_40 chr2R:7447428-7447548 8.3e-05 99_[+2]_13 chr2L:21104450-21104570 8.3e-05 31_[+2]_81 chrX:16792039-16792159 8.3e-05 10_[+2]_102 chrX:17657269-17657389 8.3e-05 87_[+2]_25 chr3R:26966825-26966945 8.3e-05 20_[+2]_92 chr2R:23851450-23851570 8.3e-05 45_[+2]_67 chrX:5732498-5732618 8.3e-05 37_[+2]_75 chr3R:10121630-10121750 8.3e-05 82_[+2]_30 chr3L:12401939-12402059 8.3e-05 82_[+2]_30 chr2R:24986038-24986158 0.00011 112_[+2] chr3L:8523444-8523564 0.00011 38_[+2]_74 chr2R:7451663-7451783 0.00011 80_[+2]_32 chr3L:11107168-11107288 0.00011 19_[+2]_93 chr2R:9137254-9137374 0.00011 52_[+2]_60 chr4:1198786-1198906 0.00011 96_[+2]_16 chr2R:9579387-9579507 0.00011 46_[+2]_66 chr2R:24875794-24875914 0.00011 37_[+2]_75 chr3L:17791269-17791389 0.00011 76_[+2]_36 chr2R:4782822-4782942 0.00013 20_[+2]_92 chr3L:19979807-19979927 0.00013 94_[+2]_18 chr3L:4469154-4469274 0.00015 7_[+2]_105 chr2L:10477012-10477132 0.00015 63_[+2]_49 chr3L:14190444-14190564 0.0002 25_[+2]_87 chr3R:12716968-12717088 0.0002 97_[+2]_15 chrX:8177011-8177131 0.0002 4_[+2]_108 chr3L:18112893-18113013 0.0002 10_[+2]_102 chr3L:4440215-4440335 0.0002 27_[+2]_85 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTRGTTCC width=8 seqs=54 chr2L:15499492-15499612 ( 48) CTGGTTCC 1 chr2R:23556177-23556297 ( 74) CTGGTTCC 1 chr3L:12519480-12519600 ( 92) CTGGTTCC 1 chr2L:8374356-8374476 ( 23) CTGGTTCC 1 chr2L:18765992-18766112 ( 112) CTGGTTCC 1 chr3L:868941-869061 ( 39) CTGGTTCC 1 chrX:10613725-10613845 ( 34) CTGGTTCC 1 chr2L:11269673-11269793 ( 72) CTGGTTCC 1 chr2R:10808883-10809003 ( 100) CTGGTTCC 1 chr4:582975-583095 ( 72) CTGGTTCC 1 chr3L:5565143-5565263 ( 37) CTAGTTCC 1 chr2R:17452593-17452713 ( 89) CTAGTTCC 1 chr3L:7058739-7058859 ( 9) CTGGTTCG 1 chrX:7954233-7954353 ( 43) CCGGTTCC 1 chr3R:6708471-6708591 ( 86) CCGGTTCC 1 chr3R:28886992-28887112 ( 10) CCGGTTCC 1 chr3L:4286947-4287067 ( 93) CCGGTTCC 1 chr2R:11723737-11723857 ( 69) GTGGTTCC 1 chr3L:16335034-16335154 ( 108) GTGGTTCC 1 chrX:4636227-4636347 ( 80) CCGGTTCC 1 chr3R:19406964-19407084 ( 19) GTGGTTCC 1 chr3L:1385992-1386112 ( 100) GTGGTTCC 1 chr2L:6948790-6948910 ( 31) CTGGTTCA 1 chr2L:5153023-5153143 ( 27) CTAGTTCG 1 chr3L:3554053-3554173 ( 3) CTAGTTCG 1 chr3R:28811876-28811996 ( 1) CTAGTTCG 1 chr3L:20241504-20241624 ( 73) CTAGTTCG 1 chr2R:7447428-7447548 ( 100) CTGGTTCA 1 chr2L:21104450-21104570 ( 32) CTGGTTCA 1 chrX:16792039-16792159 ( 11) CTGGTTCA 1 chrX:17657269-17657389 ( 88) CTGGTTCA 1 chr3R:26966825-26966945 ( 21) CTGGTTCA 1 chr2R:23851450-23851570 ( 46) CTAGTTCG 1 chrX:5732498-5732618 ( 38) CTAGTTCG 1 chr3R:10121630-10121750 ( 83) CTAGTTCG 1 chr3L:12401939-12402059 ( 83) CTGGTTCA 1 chr2R:24986038-24986158 ( 113) CCAGTTCC 1 chr3L:8523444-8523564 ( 39) GTAGTTCC 1 chr2R:7451663-7451783 ( 81) GTAGTTCC 1 chr3L:11107168-11107288 ( 20) CCAGTTCC 1 chr2R:9137254-9137374 ( 53) CCAGTTCC 1 chr4:1198786-1198906 ( 97) GTAGTTCC 1 chr2R:9579387-9579507 ( 47) GTAGTTCC 1 chr2R:24875794-24875914 ( 38) GTAGTTCC 1 chr3L:17791269-17791389 ( 77) CCAGTTCC 1 chr2R:4782822-4782942 ( 21) CTAGTTCA 1 chr3L:19979807-19979927 ( 95) CTAGTTCA 1 chr3L:4469154-4469274 ( 8) GTGGTTCG 1 chr2L:10477012-10477132 ( 64) GTGGTTCG 1 chr3L:14190444-14190564 ( 26) GTAGTTCG 1 chr3R:12716968-12717088 ( 98) CCAGTTCG 1 chrX:8177011-8177131 ( 5) CCAGTTCG 1 chr3L:18112893-18113013 ( 11) GTGGTTCA 1 chr3L:4440215-4440335 ( 28) GTGGTTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6807 E= 7.7e-017 -1240 179 25 -1240 -1240 -7 -1240 149 58 -1240 140 -1240 -1240 -1240 220 -1240 -1240 -1240 -1240 182 -1240 -1240 -1240 182 -1240 223 -1240 -1240 -48 138 14 -1240 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 7.7e-017 0.000000 0.740741 0.259259 0.000000 0.000000 0.203704 0.000000 0.796296 0.425926 0.000000 0.574074 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.203704 0.555556 0.240741 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTRGTTCC MEME-2 regular expression -------------------------------------------------------------------------------- [CG][TC][GA]GTTC[CGA] -------------------------------------------------------------------------------- Time 15.12 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-3 width = 8 sites = 23 llr = 226 E-value = 6.7e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a:::a:7 pos.-specific C :::a:::1 probability G ::::a::: matrix T a:a:::a2 bits 2.2 ** 2.0 ** 1.8 ******* 1.6 ******* Relative 1.3 ******* Entropy 1.1 ******* (14.2 bits) 0.9 ******* 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:17040563-17040683 105 2.47e-05 TTTGTCGATA TATCGATA GGCTGGCC chrX:2713921-2714041 16 2.47e-05 CGCAGGCTGA TATCGATA AAAACAGAAC chr3L:5565143-5565263 98 2.47e-05 CACATAGGCT TATCGATA GGGCCCGATA chrX:1375402-1375522 63 2.47e-05 GGCCGCCACT TATCGATA GCCACTGGAA chr2R:11968833-11968953 80 2.47e-05 TTTTTGTCGC TATCGATA GTGCTGTTCA chrX:4101007-4101127 41 2.47e-05 CGCTTCGTGT TATCGATA ACACGTAGTT chr3R:22528622-22528742 84 2.47e-05 TGGTGGGTAC TATCGATA TTTCTACAGT chr3R:12413696-12413816 87 2.47e-05 GCACAGAAAC TATCGATA ACCTACAGCA chr3L:13469328-13469448 47 2.47e-05 CCAGTTTGTT TATCGATA TTGAATCACC chr2L:8374356-8374476 71 2.47e-05 AAAGTTGCGA TATCGATA ACACAGCTAT chrX:6261033-6261153 65 2.47e-05 TTTGCACGCA TATCGATA CTTGATGCCA chr2L:3145704-3145824 52 2.47e-05 AACTCTCAGC TATCGATA GCGTGCGAAC chrX:927555-927675 21 2.47e-05 TGTTATCGGC TATCGATA ACGCAACAGT chr2R:24874864-24874984 69 2.47e-05 GTGGTTTAGA TATCGATA TCGAACCAGC chr3L:15816374-15816494 58 2.47e-05 CGATAGAGCC TATCGATA CTCGGAAGTT chr2L:10477012-10477132 78 2.47e-05 TTCGCGCGCT TATCGATA GGCAATGTTT chr3R:8715871-8715991 58 6.80e-05 AACATAAAGT TATCGATT TGGTTATCAG chrX:5085629-5085749 37 6.80e-05 AATGGCGGCA TATCGATT AATCCATATC chr2L:15038826-15038946 53 6.80e-05 CGAGCGGTGA TATCGATT GTACCTGCCT chr3L:9075054-9075174 28 6.80e-05 GGCTAAAGCT TATCGATC AGGCAGTGGC chr3L:4283746-4283866 96 6.80e-05 TTTAGACGTA TATCGATC AGTTCACATC chrX:15909674-15909794 81 6.80e-05 CAGTAAAACA TATCGATC TTCATCGGTT chr3R:10121630-10121750 37 6.80e-05 TAAAAAATTG TATCGATT TGGTTTCAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:17040563-17040683 2.5e-05 104_[+3]_8 chrX:2713921-2714041 2.5e-05 15_[+3]_97 chr3L:5565143-5565263 2.5e-05 97_[+3]_15 chrX:1375402-1375522 2.5e-05 62_[+3]_50 chr2R:11968833-11968953 2.5e-05 79_[+3]_33 chrX:4101007-4101127 2.5e-05 40_[+3]_72 chr3R:22528622-22528742 2.5e-05 83_[+3]_29 chr3R:12413696-12413816 2.5e-05 86_[+3]_26 chr3L:13469328-13469448 2.5e-05 46_[+3]_66 chr2L:8374356-8374476 2.5e-05 70_[+3]_42 chrX:6261033-6261153 2.5e-05 64_[+3]_48 chr2L:3145704-3145824 2.5e-05 51_[+3]_61 chrX:927555-927675 2.5e-05 20_[+3]_92 chr2R:24874864-24874984 2.5e-05 68_[+3]_44 chr3L:15816374-15816494 2.5e-05 57_[+3]_55 chr2L:10477012-10477132 2.5e-05 77_[+3]_35 chr3R:8715871-8715991 6.8e-05 57_[+3]_55 chrX:5085629-5085749 6.8e-05 36_[+3]_76 chr2L:15038826-15038946 6.8e-05 52_[+3]_60 chr3L:9075054-9075174 6.8e-05 27_[+3]_85 chr3L:4283746-4283866 6.8e-05 95_[+3]_17 chrX:15909674-15909794 6.8e-05 80_[+3]_32 chr3R:10121630-10121750 6.8e-05 36_[+3]_76 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=23 chr3R:17040563-17040683 ( 105) TATCGATA 1 chrX:2713921-2714041 ( 16) TATCGATA 1 chr3L:5565143-5565263 ( 98) TATCGATA 1 chrX:1375402-1375522 ( 63) TATCGATA 1 chr2R:11968833-11968953 ( 80) TATCGATA 1 chrX:4101007-4101127 ( 41) TATCGATA 1 chr3R:22528622-22528742 ( 84) TATCGATA 1 chr3R:12413696-12413816 ( 87) TATCGATA 1 chr3L:13469328-13469448 ( 47) TATCGATA 1 chr2L:8374356-8374476 ( 71) TATCGATA 1 chrX:6261033-6261153 ( 65) TATCGATA 1 chr2L:3145704-3145824 ( 52) TATCGATA 1 chrX:927555-927675 ( 21) TATCGATA 1 chr2R:24874864-24874984 ( 69) TATCGATA 1 chr3L:15816374-15816494 ( 58) TATCGATA 1 chr2L:10477012-10477132 ( 78) TATCGATA 1 chr3R:8715871-8715991 ( 58) TATCGATT 1 chrX:5085629-5085749 ( 37) TATCGATT 1 chr2L:15038826-15038946 ( 53) TATCGATT 1 chr3L:9075054-9075174 ( 28) TATCGATC 1 chr3L:4283746-4283866 ( 96) TATCGATC 1 chrX:15909674-15909794 ( 81) TATCGATC 1 chr3R:10121630-10121750 ( 37) TATCGATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.6641 E= 6.7e-005 -1117 -1117 -1117 182 181 -1117 -1117 -1117 -1117 -1117 -1117 182 -1117 223 -1117 -1117 -1117 -1117 220 -1117 181 -1117 -1117 -1117 -1117 -1117 -1117 182 129 -71 -1117 -70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 23 E= 6.7e-005 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.695652 0.130435 0.000000 0.173913 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 regular expression -------------------------------------------------------------------------------- TATCGATA -------------------------------------------------------------------------------- Time 20.97 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCTGWT MEME-4 width = 8 sites = 23 llr = 210 E-value = 1.2e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :a1:::3: pos.-specific C a::a:::1 probability G ::7::a1: matrix T ::2:a:69 bits 2.2 * * * 2.0 * * * 1.8 ** *** 1.6 ** *** Relative 1.3 ** *** * Entropy 1.1 ** *** * (13.2 bits) 0.9 ****** * 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGCTGTT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3R:13710773-13710893 105 1.42e-05 CGCGTGTTAT CAGCTGTT CTTGTTGG chr2L:15764177-15764297 72 1.42e-05 TCGGTTCCTG CAGCTGTT TTCAAGCGAG chr3L:5927652-5927772 102 1.42e-05 TTAGGGTTGC CAGCTGTT TTTTGTTTTG chr3L:1964310-1964430 76 1.42e-05 CTTTTACAAA CAGCTGTT TCATGGAAGT chr3L:3554053-3554173 16 1.42e-05 GTTCGGCGAA CAGCTGTT TTTCTTCCCA chr2R:23560435-23560555 74 1.42e-05 CTGTTGTGGA CAGCTGTT GTGGCTGCTC chr2R:19390008-19390128 96 1.42e-05 AAGCAAAATA CAGCTGTT TCGCCTTCCA chr3L:18112893-18113013 48 2.85e-05 CTTGATAAAA CAGCTGAT ATGGCTCAAT chr3L:11107168-11107288 102 2.85e-05 CCGCTGGTAG CAGCTGAT CCTGTACCGG chr2R:24668292-24668412 48 2.85e-05 ACGAACAAAA CAGCTGAT CGGCAAAATA chr2R:9137254-9137374 3 2.85e-05 AA CAGCTGAT GTCGCGTCGT chr3L:4003364-4003484 106 2.85e-05 GTCACACAAC CAGCTGAT TGCGTTT chrX:16094121-16094241 6 4.70e-05 GAACG CATCTGTT CGCGACTTTC chr3R:10148632-10148752 45 4.70e-05 AACACAACGC CATCTGTT GGCGAACAAA chr2L:106702-106822 23 4.70e-05 TTTTCACAAA CATCTGTT TATCGCCCTA chr2R:14912296-14912416 46 4.70e-05 TTGCCGTCGC CATCTGTT GGCGAACTGC chr3L:5565143-5565263 62 5.79e-05 CGGTATTGGG CAGCTGGT CACACTGCCA chr3R:19404451-19404571 57 5.79e-05 TTCTTTCCCA CAGCTGGT TACAGAACGT chrX:19494955-19495075 86 7.65e-05 GGTGGTTAAT CAACTGTT AGAATGATAA chr3R:8715871-8715991 73 8.72e-05 ATTTGGTTAT CAGCTGTC CAGTTAACAG chr2L:10517224-10517344 100 8.72e-05 TCGATATCAT CAGCTGTC CCAACCATCA chr2R:11968833-11968953 110 1.24e-04 TTTGTTAAAT CAACTGAT GGT chr3L:690342-690462 82 1.24e-04 ATGCAGATCT CAACTGAT AAGACCATTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3R:13710773-13710893 1.4e-05 104_[+4]_8 chr2L:15764177-15764297 1.4e-05 71_[+4]_41 chr3L:5927652-5927772 1.4e-05 101_[+4]_11 chr3L:1964310-1964430 1.4e-05 75_[+4]_37 chr3L:3554053-3554173 1.4e-05 15_[+4]_97 chr2R:23560435-23560555 1.4e-05 73_[+4]_39 chr2R:19390008-19390128 1.4e-05 95_[+4]_17 chr3L:18112893-18113013 2.8e-05 47_[+4]_65 chr3L:11107168-11107288 2.8e-05 101_[+4]_11 chr2R:24668292-24668412 2.8e-05 47_[+4]_65 chr2R:9137254-9137374 2.8e-05 2_[+4]_110 chr3L:4003364-4003484 2.8e-05 105_[+4]_7 chrX:16094121-16094241 4.7e-05 5_[+4]_107 chr3R:10148632-10148752 4.7e-05 44_[+4]_68 chr2L:106702-106822 4.7e-05 22_[+4]_90 chr2R:14912296-14912416 4.7e-05 45_[+4]_67 chr3L:5565143-5565263 5.8e-05 61_[+4]_51 chr3R:19404451-19404571 5.8e-05 56_[+4]_56 chrX:19494955-19495075 7.6e-05 85_[+4]_27 chr3R:8715871-8715991 8.7e-05 72_[+4]_40 chr2L:10517224-10517344 8.7e-05 99_[+4]_13 chr2R:11968833-11968953 0.00012 109_[+4]_3 chr3L:690342-690462 0.00012 81_[+4]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCTGWT width=8 seqs=23 chr3R:13710773-13710893 ( 105) CAGCTGTT 1 chr2L:15764177-15764297 ( 72) CAGCTGTT 1 chr3L:5927652-5927772 ( 102) CAGCTGTT 1 chr3L:1964310-1964430 ( 76) CAGCTGTT 1 chr3L:3554053-3554173 ( 16) CAGCTGTT 1 chr2R:23560435-23560555 ( 74) CAGCTGTT 1 chr2R:19390008-19390128 ( 96) CAGCTGTT 1 chr3L:18112893-18113013 ( 48) CAGCTGAT 1 chr3L:11107168-11107288 ( 102) CAGCTGAT 1 chr2R:24668292-24668412 ( 48) CAGCTGAT 1 chr2R:9137254-9137374 ( 3) CAGCTGAT 1 chr3L:4003364-4003484 ( 106) CAGCTGAT 1 chrX:16094121-16094241 ( 6) CATCTGTT 1 chr3R:10148632-10148752 ( 45) CATCTGTT 1 chr2L:106702-106822 ( 23) CATCTGTT 1 chr2R:14912296-14912416 ( 46) CATCTGTT 1 chr3L:5565143-5565263 ( 62) CAGCTGGT 1 chr3R:19404451-19404571 ( 57) CAGCTGGT 1 chrX:19494955-19495075 ( 86) CAACTGTT 1 chr3R:8715871-8715991 ( 73) CAGCTGTC 1 chr2L:10517224-10517344 ( 100) CAGCTGTC 1 chr2R:11968833-11968953 ( 110) CAACTGAT 1 chr3L:690342-690462 ( 82) CAACTGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.326 E= 1.2e+003 -1117 223 -1117 -1117 181 -1117 -1117 -1117 -113 -1117 167 -70 -1117 223 -1117 -1117 -1117 -1117 -1117 182 -1117 -1117 220 -1117 10 -1117 -133 110 -1117 -130 -1117 169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 23 E= 1.2e+003 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.130435 0.000000 0.695652 0.173913 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.304348 0.000000 0.086957 0.608696 0.000000 0.086957 0.000000 0.913043 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGWT MEME-4 regular expression -------------------------------------------------------------------------------- CAGCTG[TA]T -------------------------------------------------------------------------------- Time 26.79 secs. ******************************************************************************** ******************************************************************************** MOTIF MAGCGAGC MEME-5 width = 8 sites = 8 llr = 88 E-value = 2.7e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 4a:::a:: pos.-specific C 6::a:::a probability G ::a:a:a: matrix T :::::::: bits 2.2 *** ** 2.0 *** ** 1.8 ******* 1.6 ******* Relative 1.3 ******* Entropy 1.1 ******** (15.8 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGCGAGC consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:9075054-9075174 51 8.25e-06 GTGGCTACCA CAGCGAGC AGTCGGAACC chrX:14200260-14200380 113 8.25e-06 GCATTCGCCA CAGCGAGC chr2R:9846468-9846588 93 8.25e-06 ATCCGATAAC CAGCGAGC CAATATATTT chr2R:24162314-24162434 41 8.25e-06 GCTAGCGTTC CAGCGAGC CGCAAGCTCC chr2R:6648003-6648123 60 8.25e-06 AACCGGTTCC CAGCGAGC CGCGGCTCGC chr3R:23694708-23694828 72 1.92e-05 CAGTGCCTTT AAGCGAGC ACTCGAACCA chr2R:22911998-22912118 91 1.92e-05 CAGAGCCGAC AAGCGAGC CTGAACCAAA chr2L:21251922-21252042 54 1.92e-05 GGAGAGTTGC AAGCGAGC AAAAGAGAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:9075054-9075174 8.2e-06 50_[+5]_62 chrX:14200260-14200380 8.2e-06 112_[+5] chr2R:9846468-9846588 8.2e-06 92_[+5]_20 chr2R:24162314-24162434 8.2e-06 40_[+5]_72 chr2R:6648003-6648123 8.2e-06 59_[+5]_53 chr3R:23694708-23694828 1.9e-05 71_[+5]_41 chr2R:22911998-22912118 1.9e-05 90_[+5]_22 chr2L:21251922-21252042 1.9e-05 53_[+5]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MAGCGAGC width=8 seqs=8 chr3L:9075054-9075174 ( 51) CAGCGAGC 1 chrX:14200260-14200380 ( 113) CAGCGAGC 1 chr2R:9846468-9846588 ( 93) CAGCGAGC 1 chr2R:24162314-24162434 ( 41) CAGCGAGC 1 chr2R:6648003-6648123 ( 60) CAGCGAGC 1 chr3R:23694708-23694828 ( 72) AAGCGAGC 1 chr2R:22911998-22912118 ( 91) AAGCGAGC 1 chr2L:21251922-21252042 ( 54) AAGCGAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 13.1077 E= 2.7e+004 40 155 -965 -965 181 -965 -965 -965 -965 -965 220 -965 -965 223 -965 -965 -965 -965 220 -965 181 -965 -965 -965 -965 -965 220 -965 -965 223 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 2.7e+004 0.375000 0.625000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAGCGAGC MEME-5 regular expression -------------------------------------------------------------------------------- [CA]AGCGAGC -------------------------------------------------------------------------------- Time 32.56 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:17105846-17105966 4.01e-03 69_[+2(3.55e-05)]_43 chr4:582975-583095 2.60e-03 71_[+2(1.07e-05)]_41 chr2L:321932-322052 1.19e-02 54_[+1(1.90e-05)]_58 chrX:13597892-13598012 1.53e-02 34_[+1(4.78e-05)]_22_[+1(4.78e-05)]_\ 48 chr3L:12401939-12402059 3.00e-03 73_[+1(1.90e-05)]_1_[+2(8.28e-05)]_\ 30 chrX:15733331-15733451 1.99e-03 18_[+1(3.33e-05)]_94 chr3R:19404451-19404571 3.20e-05 39_[+1(3.33e-05)]_9_[+4(5.79e-05)]_\ 56 chrX:19494955-19495075 4.19e-05 33_[+2(1.07e-05)]_44_[+4(7.65e-05)]_\ 27 chrX:17296422-17296542 3.26e-03 50_[+1(1.90e-05)]_62 chrX:2707830-2707950 1.03e-03 70_[+1(1.90e-05)]_42 chrX:2690515-2690635 3.05e-01 120 chr3L:21185718-21185838 6.77e-02 26_[+1(8.39e-05)]_86 chr3L:7058540-7058660 6.97e-01 120 chr3L:7058739-7058859 2.34e-02 8_[+2(3.55e-05)]_104 chr2L:18846314-18846434 5.24e-02 120 chr3R:30583683-30583803 6.55e-01 120 chr3L:4510460-4510580 6.10e-02 23_[+1(3.33e-05)]_6_[+1(1.90e-05)]_\ 75 chr2R:15665239-15665359 4.81e-02 28_[+1(3.33e-05)]_84 chr2L:10477012-10477132 1.06e-03 77_[+3(2.47e-05)]_35 chrX:16325625-16325745 3.45e-02 43_[+1(3.33e-05)]_69 chr3L:22274041-22274161 7.23e-01 120 chrX:14588648-14588768 1.54e-02 34_[+1(3.33e-05)]_2_[+1(3.33e-05)]_\ 68 chr3L:18147735-18147855 1.38e-02 3_[+1(1.90e-05)]_109 chr2R:10808883-10809003 2.50e-04 81_[+1(3.33e-05)]_10_[+2(1.07e-05)]_\ 13 chrX:6202719-6202839 2.46e-01 120 chrX:23007075-23007195 3.19e-01 120 chr2L:11269673-11269793 1.28e-03 71_[+2(1.07e-05)]_10_[+2(3.55e-05)]_\ 23 chr3R:9052078-9052198 3.82e-01 120 chr3R:10121630-10121750 8.15e-03 36_[+3(6.80e-05)]_38_[+2(8.28e-05)]_\ 30 chrX:14266231-14266351 2.14e-01 120 chr2L:10687541-10687661 1.16e-01 120 chr2L:12579190-12579310 1.08e-04 58_[+2(1.07e-05)]_54 chrX:9192583-9192703 4.24e-02 73_[+1(3.33e-05)]_39 chr2L:18826748-18826868 2.97e-01 120 chr2L:13245960-13246080 1.33e-01 14_[+1(4.78e-05)]_98 chr2R:17140898-17141018 2.15e-01 120 chr3L:7094687-7094807 4.88e-04 46_[+2(3.55e-05)]_1_[+1(5.88e-05)]_\ 57 chr2R:6648003-6648123 4.10e-05 51_[+2(5.44e-05)]_[+5(8.25e-06)]_53 chrX:10613725-10613845 1.95e-04 19_[+5(3.86e-05)]_6_[+2(1.07e-05)]_\ 79 chrX:1691614-1691734 1.75e-01 120 chr3L:17791269-17791389 2.55e-02 120 chr2L:6130658-6130778 2.29e-03 71_[+2(3.55e-05)]_41 chr2L:21220561-21220681 1.26e-01 49_[+1(8.39e-05)]_63 chr3R:19017416-19017536 8.90e-03 73_[+2(1.07e-05)]_39 chr3L:1023882-1024002 2.29e-03 120 chr3L:19818760-19818880 1.91e-01 120 chr3R:22753090-22753210 9.78e-01 120 chr3L:10089716-10089836 9.94e-01 120 chr2R:19390008-19390128 8.39e-05 43_[+1(1.90e-05)]_44_[+4(1.42e-05)]_\ 17 chr3R:25235512-25235632 1.47e-02 75_[+1(3.33e-05)]_37 chr3L:4003364-4003484 1.41e-02 105_[+4(2.85e-05)]_7 chrX:17039085-17039205 1.38e-03 69_[+1(1.90e-05)]_43 chr2R:14912296-14912416 6.27e-02 45_[+4(4.70e-05)]_67 chr2R:24162314-24162434 5.03e-03 40_[+5(8.25e-06)]_72 chrX:8100495-8100615 5.31e-01 120 chrX:8100711-8100831 4.95e-01 120 chr3L:12732890-12733010 1.36e-01 120 chr3L:19807660-19807780 4.56e-02 76_[+2(8.28e-05)]_36 chr2R:24875794-24875914 4.05e-03 49_[+1(3.33e-05)]_63 chr2R:23560435-23560555 2.90e-02 53_[+4(1.42e-05)]_12_[+4(1.42e-05)]_\ 39 chr3L:12534500-12534620 1.45e-03 6_[+2(1.07e-05)]_106 chr2R:13235096-13235216 8.21e-01 120 chrX:16791196-16791316 1.00e-03 62_[+2(1.07e-05)]_50 chr3L:5102189-5102309 8.53e-02 120 chrX:8460825-8460945 3.42e-02 120 chrX:18261654-18261774 5.76e-01 120 chr2R:9579387-9579507 6.39e-02 120 chr3L:4469154-4469274 4.30e-03 90_[+1(1.90e-05)]_22 chr3L:1385992-1386112 1.91e-03 99_[+2(5.44e-05)]_[+1(1.90e-05)]_5 chr3L:4178335-4178455 1.01e-01 120 chr3L:1549750-1549870 9.75e-03 59_[+1(1.90e-05)]_53 chr3L:19584655-19584775 5.32e-02 120 chr2L:106702-106822 2.04e-01 22_[+4(4.70e-05)]_90 chr2L:9089684-9089804 5.19e-02 78_[+1(1.90e-05)]_34 chr3R:19406964-19407084 4.95e-03 18_[+2(5.44e-05)]_94 chr3L:868941-869061 6.68e-02 38_[+2(1.07e-05)]_74 chr3L:15816374-15816494 6.08e-04 57_[+3(2.47e-05)]_24_[+1(1.90e-05)]_\ 23 chr3L:19979807-19979927 1.12e-02 66_[+1(1.90e-05)]_5_[+1(7.31e-05)]_\ 33 chrX:5084292-5084412 1.54e-02 47_[+1(1.90e-05)]_65 chrX:5732498-5732618 6.02e-03 37_[+2(8.28e-05)]_8_[+1(3.33e-05)]_\ 59 chr4:1023931-1024051 5.11e-03 45_[+1(4.78e-05)]_67 chr2L:18846926-18847046 1.08e-01 120 chr3L:4440215-4440335 1.10e-02 120 chr3R:15249837-15249957 6.00e-03 55_[+2(5.44e-05)]_57 chr4:1198786-1198906 1.39e-01 120 chr2R:24874864-24874984 2.11e-03 68_[+3(2.47e-05)]_2_[+1(8.39e-05)]_\ 34 chrX:927555-927675 2.10e-02 20_[+3(2.47e-05)]_92 chr2L:19755196-19755316 6.80e-01 120 chr2L:19364258-19364378 2.10e-03 [+1(1.90e-05)]_112 chrX:4636227-4636347 3.29e-03 43_[+1(5.88e-05)]_28_[+2(5.44e-05)]_\ 33 chrX:16941435-16941555 1.41e-01 85_[+1(8.39e-05)]_27 chr3R:4712172-4712292 4.78e-02 41_[+1(3.33e-05)]_71 chr2L:10988207-10988327 3.80e-01 120 chr3R:31738381-31738501 3.73e-01 120 chr2R:4192229-4192349 1.15e-01 120 chr3L:20241711-20241831 6.36e-01 120 chr3R:7093751-7093871 9.94e-01 120 chr2R:9846468-9846588 6.17e-05 92_[+5(8.25e-06)]_20 chrX:12784844-12784964 1.18e-02 120 chr2R:9137254-9137374 7.12e-04 2_[+4(2.85e-05)]_110 chr2R:11405806-11405926 1.89e-01 120 chrX:15117333-15117453 1.74e-02 65_[+1(4.78e-05)]_47 chr2R:23851450-23851570 6.85e-03 45_[+2(8.28e-05)]_67 chr2R:10049278-10049398 9.21e-01 120 chr3L:5561548-5561668 9.14e-01 120 chrX:15909674-15909794 2.81e-04 80_[+3(6.80e-05)]_32 chr2R:17726499-17726619 4.08e-01 120 chr3R:20866349-20866469 1.77e-01 120 chrX:16321157-16321277 4.91e-01 120 chr2R:22121664-22121784 8.50e-03 44_[+1(4.78e-05)]_68 chr3R:26966825-26966945 1.99e-04 20_[+2(8.28e-05)]_6_[+1(1.90e-05)]_\ 78 chr2R:24668292-24668412 5.36e-02 47_[+4(2.85e-05)]_65 chrX:1692647-1692767 1.54e-01 120 chrX:17657269-17657389 2.58e-01 87_[+2(8.28e-05)]_25 chrX:16792039-16792159 1.10e-02 10_[+2(8.28e-05)]_102 chrX:1517048-1517168 4.18e-01 120 chr3L:16335034-16335154 1.49e-01 107_[+2(5.44e-05)]_5 chr3R:7783552-7783672 1.68e-01 120 chrX:14200260-14200380 1.80e-02 112_[+5(8.25e-06)] chr2L:3145704-3145824 2.55e-06 51_[+3(2.47e-05)]_11_[+1(1.90e-05)]_\ 42 chr3R:6456517-6456637 9.81e-01 120 chr2L:9253140-9253260 9.93e-01 120 chr2L:18845003-18845123 5.66e-03 42_[+2(1.07e-05)]_70 chr3L:11107168-11107288 1.00e-03 101_[+4(2.85e-05)]_11 chr2R:4782822-4782942 5.93e-02 120 chr2R:16729439-16729559 1.12e-02 39_[+1(4.78e-05)]_73 chr2R:12515027-12515147 4.74e-01 120 chr3R:21339782-21339902 1.21e-01 120 chr3L:4283746-4283866 3.64e-04 37_[+1(3.33e-05)]_50_[+3(6.80e-05)]_\ 17 chr2L:21251922-21252042 3.72e-03 53_[+5(1.92e-05)]_6_[+1(1.90e-05)]_\ 45 chr3R:10148632-10148752 5.71e-02 44_[+4(4.70e-05)]_68 chr2L:2769615-2769735 1.16e-03 19_[+1(1.90e-05)]_93 chr2L:18765992-18766112 2.14e-03 95_[+1(4.78e-05)]_8_[+2(1.07e-05)]_\ 1 chrX:9220507-9220627 1.40e-03 9_[+1(1.90e-05)]_103 chr3R:8984294-8984414 6.70e-02 120 chr2L:21104450-21104570 5.68e-02 31_[+2(8.28e-05)]_81 chr3L:9075054-9075174 2.44e-05 27_[+3(6.80e-05)]_15_[+5(8.25e-06)]_\ 5_[+1(3.33e-05)]_49 chrX:6261033-6261153 1.30e-02 64_[+3(2.47e-05)]_48 chr3R:23538822-23538942 5.75e-01 120 chr3L:15502443-15502563 1.54e-01 120 chr2L:8374356-8374476 6.77e-06 22_[+2(1.07e-05)]_19_[+1(3.33e-05)]_\ 13_[+3(2.47e-05)]_42 chrX:9644707-9644827 6.06e-03 73_[+1(1.90e-05)]_39 chrX:2714897-2715017 2.95e-01 120 chr3R:28677459-28677579 7.79e-01 120 chr3L:690342-690462 4.07e-01 120 chr3L:18112893-18113013 4.36e-05 47_[+4(2.85e-05)]_31_[+1(1.90e-05)]_\ 26 chrX:16094121-16094241 5.02e-04 5_[+4(4.70e-05)]_22_[+1(3.33e-05)]_\ 77 chr2R:17639272-17639392 5.09e-02 38_[+1(5.88e-05)]_74 chr3L:5141591-5141711 1.23e-01 120 chr3L:3409461-3409581 4.47e-01 120 chrX:8177011-8177131 1.43e-01 120 chr2R:7447428-7447548 8.70e-04 96_[+4(5.79e-05)]_16 chr2R:22911998-22912118 1.69e-02 90_[+5(1.92e-05)]_22 chr2R:17452593-17452713 3.46e-02 88_[+2(2.46e-05)]_24 chr2L:94657-94777 2.49e-03 26_[+1(3.33e-05)]_86 chr2R:11723737-11723857 1.42e-01 68_[+2(5.44e-05)]_44 chr3L:13469328-13469448 1.04e-03 33_[+1(3.33e-05)]_5_[+3(2.47e-05)]_\ 66 chr2L:8685965-8686085 3.56e-01 120 chr3L:20241504-20241624 7.26e-03 72_[+2(8.28e-05)]_40 chr3R:12716968-12717088 1.99e-02 62_[+2(8.28e-05)]_50 chr2R:16047392-16047512 1.66e-03 14_[+1(1.90e-05)]_98 chr3R:28811876-28811996 3.59e-03 [+2(8.28e-05)]_112 chr3L:16100187-16100307 4.91e-01 120 chr3R:6106866-6106986 4.51e-03 56_[+1(5.88e-05)]_56 chr3R:12413696-12413816 1.26e-04 58_[+2(2.46e-05)]_20_[+3(2.47e-05)]_\ 26 chr3L:10508118-10508238 2.56e-01 120 chr3R:22528622-22528742 8.53e-04 83_[+3(2.47e-05)]_29 chr3R:7745451-7745571 5.46e-02 120 chr3L:4286947-4287067 1.39e-03 44_[+1(3.33e-05)]_40_[+2(5.44e-05)]_\ 20 chr2R:7451663-7451783 1.27e-01 120 chr2R:11931071-11931191 2.09e-03 54_[+1(1.90e-05)]_58 chr2L:10517224-10517344 2.57e-04 30_[+2(2.46e-05)]_61_[+4(8.72e-05)]_\ 13 chr3L:3554053-3554173 2.11e-04 2_[+2(8.28e-05)]_5_[+4(1.42e-05)]_\ 97 chrX:4101007-4101127 9.58e-02 40_[+3(2.47e-05)]_72 chr2L:15038826-15038946 4.03e-02 52_[+3(6.80e-05)]_60 chr3L:1964310-1964430 2.24e-05 75_[+4(1.42e-05)]_17_[+2(3.55e-05)]_\ 3_[+1(8.39e-05)]_1 chr2L:17603270-17603390 1.15e-01 120 chr2R:11968833-11968953 3.45e-03 59_[+3(8.69e-05)]_12_[+3(2.47e-05)]_\ 33 chr2R:4192429-4192549 6.94e-02 18_[+2(8.28e-05)]_94 chr3L:11523498-11523618 7.72e-01 120 chrX:5085629-5085749 5.99e-02 36_[+3(6.80e-05)]_76 chr3L:8523444-8523564 2.79e-01 120 chrX:1375402-1375522 2.83e-02 62_[+3(2.47e-05)]_50 chr3L:5565143-5565263 9.92e-05 36_[+2(2.46e-05)]_17_[+4(5.79e-05)]_\ 28_[+3(2.47e-05)]_15 chr3R:29993285-29993405 8.34e-02 120 chrX:21044543-21044663 3.86e-02 120 chr3R:23539034-23539154 7.10e-01 120 chr2L:12575244-12575364 8.20e-01 120 chr2R:15922491-15922611 8.29e-03 64_[+1(4.78e-05)]_5_[+1(8.39e-05)]_\ 35 chr3L:14562777-14562897 1.91e-01 120 chr3L:5141792-5141912 7.66e-01 120 chr3R:30036804-30036924 3.81e-03 90_[+2(8.28e-05)]_22 chr2R:24687320-24687440 4.57e-02 120 chr2L:2559521-2559641 1.28e-01 120 chrX:11369556-11369676 4.19e-02 87_[+5(8.00e-05)]_25 chr3L:3192632-3192752 5.96e-02 96_[+1(1.90e-05)]_16 chr3L:12519480-12519600 1.85e-03 91_[+2(1.07e-05)]_21 chr2L:1182750-1182870 3.56e-04 52_[+1(3.33e-05)]_60 chr3R:23694708-23694828 4.13e-03 71_[+5(1.92e-05)]_41 chr3R:28886992-28887112 3.09e-03 9_[+2(5.44e-05)]_22_[+2(5.44e-05)]_\ 73 chr3L:20126292-20126412 1.76e-02 41_[+1(3.33e-05)]_71 chrX:15450145-15450265 1.27e-03 76_[+1(8.39e-05)]_6_[+1(3.33e-05)]_\ 22 chr2L:11874386-11874506 3.62e-01 120 chrX:2713921-2714041 9.99e-02 15_[+3(2.47e-05)]_97 chr2R:17419604-17419724 1.08e-01 33_[+1(7.31e-05)]_79 chr2L:1186248-1186368 2.36e-03 120 chr3L:10089940-10090060 4.20e-01 120 chr3L:12537254-12537374 5.93e-01 120 chrX:12764762-12764882 1.30e-02 83_[+3(2.47e-05)]_17_[+3(2.47e-05)]_\ 4 chr2R:24986038-24986158 1.03e-02 103_[+1(3.33e-05)]_9 chr3R:7090133-7090253 2.65e-02 120 chr3R:17040563-17040683 2.37e-03 53_[+1(3.33e-05)]_43_[+3(2.47e-05)]_\ 8 chr3R:6708471-6708591 1.43e-01 85_[+2(5.44e-05)]_27 chr3R:8240486-8240606 9.62e-03 69_[+1(3.33e-05)]_43 chrX:7954233-7954353 1.53e-01 42_[+2(5.44e-05)]_70 chr3R:31571910-31572030 2.63e-02 19_[+2(2.46e-05)]_93 chr3L:5927652-5927772 1.35e-01 101_[+4(1.42e-05)]_11 chr3R:8339114-8339234 1.49e-01 120 chrX:625303-625423 2.05e-01 120 chr2L:15764177-15764297 2.36e-03 71_[+4(1.42e-05)]_41 chr2R:23556177-23556297 9.32e-05 46_[+1(5.88e-05)]_19_[+2(1.07e-05)]_\ 39 chrX:658189-658309 9.71e-01 120 chr3R:24148983-24149103 8.17e-01 120 chrX:16836114-16836234 2.92e-02 63_[+1(1.90e-05)]_49 chr2R:9843684-9843804 2.08e-01 120 chr3R:25662025-25662145 6.41e-02 61_[+1(3.33e-05)]_51 chr2L:5153023-5153143 9.24e-02 26_[+2(8.28e-05)]_86 chr2L:2855302-2855422 3.99e-01 120 chr3R:18168014-18168134 1.90e-01 104_[+1(7.31e-05)]_8 chr2R:8665713-8665833 6.80e-02 120 chr2L:6948790-6948910 1.64e-03 30_[+2(8.28e-05)]_23_[+1(5.88e-05)]_\ 51 chr2L:19580386-19580506 1.57e-01 120 chr2L:10344344-10344464 1.09e-01 120 chr2L:15499492-15499612 2.28e-03 35_[+2(5.44e-05)]_4_[+2(1.07e-05)]_\ 65 chr2L:9614062-9614182 9.96e-03 85_[+2(5.44e-05)]_27 chr2R:6153101-6153221 2.42e-04 73_[+2(1.07e-05)]_39 chr2R:4595219-4595339 9.26e-03 79_[+1(1.90e-05)]_33 chr2R:19290719-19290839 2.02e-01 120 chr3L:4021358-4021478 1.30e-03 50_[+1(1.90e-05)]_62 chr2L:10479939-10480059 2.21e-01 120 chr3R:8715871-8715991 3.37e-03 57_[+3(6.80e-05)]_7_[+4(8.72e-05)]_\ 40 chr3R:8008058-8008178 4.12e-01 120 chrX:7746680-7746800 3.35e-04 27_[+1(1.90e-05)]_85 chr3L:14190444-14190564 9.30e-02 120 chrX:13669538-13669658 5.25e-01 120 chr4:904756-904876 3.12e-01 120 chr3R:13710773-13710893 6.32e-02 104_[+4(1.42e-05)]_8 chr3R:5354972-5355092 5.29e-03 76_[+1(1.90e-05)]_36 chr3R:23384769-23384889 4.00e-01 120 chr2L:20426027-20426147 1.97e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c28n03.farnam.hpc.yale.internal ********************************************************************************