******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG10267.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2L:13182604-13182724 1.0000 120 chr2L:10311123-10311243 1.0000 120 chr2R:7516336-7516456 1.0000 120 chr3R:15367632-15367752 1.0000 120 chr3R:29503864-29503984 1.0000 120 chr2L:15764145-15764265 1.0000 120 chr2R:12182571-12182691 1.0000 120 chr3R:13699494-13699614 1.0000 120 chr3R:25594255-25594375 1.0000 120 chr3L:8191175-8191295 1.0000 120 chr2L:19530283-19530403 1.0000 120 chr2R:7512739-7512859 1.0000 120 chr3R:9763662-9763782 1.0000 120 chr3R:15839450-15839570 1.0000 120 chrX:4636190-4636310 1.0000 120 chr3L:11630819-11630939 1.0000 120 chr2R:18710839-18710959 1.0000 120 chrX:10219963-10220083 1.0000 120 chr3L:16390907-16391027 1.0000 120 chr2R:13205323-13205443 1.0000 120 chrX:15572091-15572211 1.0000 120 chrX:19762335-19762455 1.0000 120 chrX:9605946-9606066 1.0000 120 chr2R:17048770-17048890 1.0000 120 chr3L:833987-834107 1.0000 120 chr2L:1504432-1504552 1.0000 120 chr2R:20278903-20279023 1.0000 120 chr3L:7339034-7339154 1.0000 120 chr2L:11120289-11120409 1.0000 120 chr2L:1728650-1728770 1.0000 120 chr3R:8723105-8723225 1.0000 120 chr2L:15272421-15272541 1.0000 120 chr2L:18682055-18682175 1.0000 120 chr2R:21720333-21720453 1.0000 120 chr3L:20393530-20393650 1.0000 120 chr2L:811505-811625 1.0000 120 chr3R:25335196-25335316 1.0000 120 chr3R:22446610-22446730 1.0000 120 chr3R:16482405-16482525 1.0000 120 chr3L:19096190-19096310 1.0000 120 chrX:616912-617032 1.0000 120 chrX:8177115-8177235 1.0000 120 chr3L:4193867-4193987 1.0000 120 chr3R:15363786-15363906 1.0000 120 chrX:11359094-11359214 1.0000 120 chr4:721931-722051 1.0000 120 chrX:5754972-5755092 1.0000 120 chr3R:29116284-29116404 1.0000 120 chr3R:7902643-7902763 1.0000 120 chr2R:24188198-24188318 1.0000 120 chr3R:5611861-5611981 1.0000 120 chr2L:15118158-15118278 1.0000 120 chr3R:23763218-23763338 1.0000 120 chr3L:5368046-5368166 1.0000 120 chr2L:13793448-13793568 1.0000 120 chrX:17423455-17423575 1.0000 120 chr3R:14513592-14513712 1.0000 120 chr3R:23996351-23996471 1.0000 120 chr3R:25493428-25493548 1.0000 120 chr3L:4367471-4367591 1.0000 120 chr3L:21131529-21131649 1.0000 120 chr2R:22066791-22066911 1.0000 120 chr3L:8121720-8121840 1.0000 120 chr2R:23925106-23925226 1.0000 120 chr2L:6663791-6663911 1.0000 120 chr3L:10698301-10698421 1.0000 120 chrX:19664015-19664135 1.0000 120 chr2R:8891443-8891563 1.0000 120 chr3R:10045510-10045630 1.0000 120 chr2L:3480561-3480681 1.0000 120 chr2R:10437549-10437669 1.0000 120 chr2R:7712023-7712143 1.0000 120 chr2L:19565582-19565702 1.0000 120 chrX:8407256-8407376 1.0000 120 chr2R:13235890-13236010 1.0000 120 chr2R:9836859-9836979 1.0000 120 chr2R:22492139-22492259 1.0000 120 chr2R:9039570-9039690 1.0000 120 chr3L:5662207-5662327 1.0000 120 chrX:11483370-11483490 1.0000 120 chr2L:7782806-7782926 1.0000 120 chr2R:16344388-16344508 1.0000 120 chr2L:1732287-1732407 1.0000 120 chr2R:13239434-13239554 1.0000 120 chr2L:1166413-1166533 1.0000 120 chr2L:21179779-21179899 1.0000 120 chr3L:18622512-18622632 1.0000 120 chr3L:19642794-19642914 1.0000 120 chr2L:12096494-12096614 1.0000 120 chr2R:9251950-9252070 1.0000 120 chrX:19746000-19746120 1.0000 120 chrX:1868778-1868898 1.0000 120 chrX:8152825-8152945 1.0000 120 chr2L:18677098-18677218 1.0000 120 chr3L:324685-324805 1.0000 120 chr3R:20762565-20762685 1.0000 120 chr3L:10631053-10631173 1.0000 120 chr3R:30423858-30423978 1.0000 120 chr3R:23348014-23348134 1.0000 120 chr2L:6561666-6561786 1.0000 120 chr2R:7510175-7510295 1.0000 120 chr2L:2216244-2216364 1.0000 120 chrX:18565996-18566116 1.0000 120 chr3L:11711407-11711527 1.0000 120 chr2R:12431068-12431188 1.0000 120 chrX:17842045-17842165 1.0000 120 chr3R:7080410-7080530 1.0000 120 chr3L:2107628-2107748 1.0000 120 chr3R:11412539-11412659 1.0000 120 chr3L:8576188-8576308 1.0000 120 chrX:9149125-9149245 1.0000 120 chr4:1064926-1065046 1.0000 120 chrX:841254-841374 1.0000 120 chr2R:19292431-19292551 1.0000 120 chr2L:9996578-9996698 1.0000 120 chr2L:155238-155358 1.0000 120 chr3L:13387808-13387928 1.0000 120 chr3R:10571637-10571757 1.0000 120 chr2L:13289850-13289970 1.0000 120 chr2L:1177598-1177718 1.0000 120 chr2L:8438198-8438318 1.0000 120 chr3L:7339242-7339362 1.0000 120 chr2L:294707-294827 1.0000 120 chr2L:2357479-2357599 1.0000 120 chr2R:16322098-16322218 1.0000 120 chr3R:8726738-8726858 1.0000 120 chr3R:18385742-18385862 1.0000 120 chr2R:19503007-19503127 1.0000 120 chr2R:21090975-21091095 1.0000 120 chrX:801656-801776 1.0000 120 chrX:11572427-11572547 1.0000 120 chr3L:11728241-11728361 1.0000 120 chr2R:16149856-16149976 1.0000 120 chr2L:5907018-5907138 1.0000 120 chr3R:29835439-29835559 1.0000 120 chr2R:4782838-4782958 1.0000 120 chrX:18566198-18566318 1.0000 120 chr2R:24780810-24780930 1.0000 120 chr2L:13790785-13790905 1.0000 120 chrX:11137043-11137163 1.0000 120 chr2L:8198853-8198973 1.0000 120 chr2R:24571746-24571866 1.0000 120 chr3R:18677540-18677660 1.0000 120 chr2L:21166580-21166700 1.0000 120 chr3R:28811329-28811449 1.0000 120 chr2R:13152658-13152778 1.0000 120 chr3R:19643021-19643141 1.0000 120 chr2R:10838712-10838832 1.0000 120 chrX:16651197-16651317 1.0000 120 chr2R:16230675-16230795 1.0000 120 chr2L:19526427-19526547 1.0000 120 chr2R:17604629-17604749 1.0000 120 chr3R:11429942-11430062 1.0000 120 chrX:20159982-20160102 1.0000 120 chr3R:14315901-14316021 1.0000 120 chr3L:16580101-16580221 1.0000 120 chr3R:16004159-16004279 1.0000 120 chr3L:10661478-10661598 1.0000 120 chrX:19494407-19494527 1.0000 120 chr2L:16356890-16357010 1.0000 120 chr3R:17053539-17053659 1.0000 120 chr2L:6622782-6622902 1.0000 120 chrX:6279476-6279596 1.0000 120 chrX:11905369-11905489 1.0000 120 chr2R:17419995-17420115 1.0000 120 chr3L:8304085-8304205 1.0000 120 chr2L:8437317-8437437 1.0000 120 chr2R:7653951-7654071 1.0000 120 chrX:11816634-11816754 1.0000 120 chr2R:9098466-9098586 1.0000 120 chrX:5329670-5329790 1.0000 120 chr2R:21481817-21481937 1.0000 120 chr2R:7972313-7972433 1.0000 120 chr3L:9729912-9730032 1.0000 120 chr3R:26056508-26056628 1.0000 120 chr3L:8338951-8339071 1.0000 120 chr2R:18705872-18705992 1.0000 120 chr2R:8891647-8891767 1.0000 120 chr3L:15566949-15567069 1.0000 120 chr2L:21142330-21142450 1.0000 120 chr2R:7512943-7513063 1.0000 120 chr2R:16772661-16772781 1.0000 120 chrX:19170947-19171067 1.0000 120 chr2R:7407156-7407276 1.0000 120 chr3L:3811149-3811269 1.0000 120 chr3L:15098039-15098159 1.0000 120 chr4:869478-869598 1.0000 120 chrX:617583-617703 1.0000 120 chr2R:16291440-16291560 1.0000 120 chr2R:18627807-18627927 1.0000 120 chr3L:8125110-8125230 1.0000 120 chrX:15992268-15992388 1.0000 120 chr3L:7915996-7916116 1.0000 120 chr2R:12980006-12980126 1.0000 120 chr2R:13509533-13509653 1.0000 120 chr2L:2220652-2220772 1.0000 120 chr2R:9114086-9114206 1.0000 120 chrX:1476962-1477082 1.0000 120 chr3L:10686771-10686891 1.0000 120 chrX:15759889-15760009 1.0000 120 chr3L:20494399-20494519 1.0000 120 chr3L:15116579-15116699 1.0000 120 chr3R:5270963-5271083 1.0000 120 chr3L:12116008-12116128 1.0000 120 chr3L:14219518-14219638 1.0000 120 chr3L:15988147-15988267 1.0000 120 chr3L:5368260-5368380 1.0000 120 chr2R:9237859-9237979 1.0000 120 chr2L:3373403-3373523 1.0000 120 chr3L:8765696-8765816 1.0000 120 chr2L:16732464-16732584 1.0000 120 chr3R:29062951-29063071 1.0000 120 chrX:15875712-15875832 1.0000 120 chr3L:9972644-9972764 1.0000 120 chr4:879217-879337 1.0000 120 chrX:4918733-4918853 1.0000 120 chr3R:29130973-29131093 1.0000 120 chr2R:6652909-6653029 1.0000 120 chrX:2713954-2714074 1.0000 120 chrX:2065280-2065400 1.0000 120 chr3R:27275176-27275296 1.0000 120 chr2R:6807551-6807671 1.0000 120 chr2R:12198843-12198963 1.0000 120 chr2L:5987004-5987124 1.0000 120 chr3L:2377513-2377633 1.0000 120 chrX:11806393-11806513 1.0000 120 chr3R:11796945-11797065 1.0000 120 chr2R:9103152-9103272 1.0000 120 chr2L:10331282-10331402 1.0000 120 chr2R:12037207-12037327 1.0000 120 chr3L:8576394-8576514 1.0000 120 chr3L:1602659-1602779 1.0000 120 chrX:19704125-19704245 1.0000 120 chr3L:9614078-9614198 1.0000 120 chr4:1053961-1054081 1.0000 120 chrX:10385856-10385976 1.0000 120 chr2R:20640797-20640917 1.0000 120 chr2L:4224214-4224334 1.0000 120 chr2R:6656373-6656493 1.0000 120 chr2R:9116530-9116650 1.0000 120 chr3L:20816043-20816163 1.0000 120 chr3R:6009834-6009954 1.0000 120 chr2R:18660625-18660745 1.0000 120 chr2L:3173107-3173227 1.0000 120 chr2R:10437887-10438007 1.0000 120 chr2R:6653128-6653248 1.0000 120 chr2R:15542584-15542704 1.0000 120 chr3L:8296996-8297116 1.0000 120 chr2R:14871210-14871330 1.0000 120 chr3R:5483935-5484055 1.0000 120 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/fly/inference_raw/MEME/RankLinear8.0_60_CG10267/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/fly/fasta/RankLinear8.0_60/CG10267.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 30000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 30000 norand= no csites= 1000 Letter frequencies in dataset: A 0.309 C 0.188 G 0.187 T 0.316 Background letter frequencies (from file dataset with add-one prior applied): A 0.309 C 0.188 G 0.187 T 0.316 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CARYRYTG MEME-1 width = 8 sites = 195 llr = 1414 E-value = 2.0e-131 ******************************************************************************** -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :94:5::1 pos.-specific C 9::5:6:: probability G ::6:5::8 matrix T 1::5:4a1 bits 2.4 2.2 1.9 * 1.7 * * Relative 1.5 ** ** Entropy 1.2 ** *** (10.5 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CAGCGCTG consensus ATAT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:4367471-4367591 62 4.24e-06 CCATCTCTAG CAGCGCTG TTAAGTGAGT chr2R:12182571-12182691 20 4.24e-06 AAATCCTTAA CAGCGCTG TTGTGTTGCT chr3L:8125110-8125230 48 1.13e-05 CAGTGCTTCG CAGCACTG GTTGGCGTTA chr2R:16291440-16291560 76 1.13e-05 CTGCGTTAAC CAGCACTG TCACACATGT chr3L:8338951-8339071 62 1.13e-05 TATAGTTTAC CAGCACTG TTTAAAAATG chr3R:11429942-11430062 89 1.13e-05 TCAAGTTTAC CAGCACTG ACAAAGATCT chr2L:8198853-8198973 55 1.13e-05 AGCCGCTTGA CAGCACTG TTTAATTTAT chrX:11137043-11137163 15 1.13e-05 CCGCGTTGCG CAGCACTG GACTGCAGCG chr2L:5907018-5907138 30 1.13e-05 ATTCAAAATG CAGCACTG GCGTTTGGTC chr2R:16149856-16149976 43 1.13e-05 GCATATTTTA CAGCACTG TTTTTAAAGT chr3L:11728241-11728361 90 1.13e-05 ATACTATTTT CAGCACTG GCACTTATCA chr2L:8438198-8438318 76 1.13e-05 GTGTTCTTTC CAGCACTG GAAACAGCTG chr3R:30423858-30423978 58 1.13e-05 TGGAATTTAC CAGCACTG CCGAACAGCT chr2L:1166413-1166533 73 1.13e-05 CTGCACTTCA CAGCACTG GCCGCTTGGC chr2R:13235890-13236010 84 1.13e-05 AATCGCTTTG CAGCACTG TCTCAGTTGG chrX:17423455-17423575 16 1.13e-05 TAGTGTTTTG CAGCACTG CTCTGCCCGT chr3R:23763218-23763338 68 1.13e-05 GCTAGCTGCA CAGCACTG GCTGATAGCT chr3R:8723105-8723225 50 1.13e-05 CGTTCGTTTA CAGCACTG GCAGTGTGTG chr2R:10437887-10438007 19 1.84e-05 TTGTTGCGGC CAGTGCTG GTCAACAGCC chr2R:18660625-18660745 68 1.84e-05 CGCTGCTCTC CAGTGCTG GTTAATTTCC chr2L:4224214-4224334 46 1.84e-05 GCTCCATTTT CAGTGCTG TAAATTGCCA chrX:1476962-1477082 100 1.84e-05 CGAGATAAAC CAGTGCTG TAAAGCGCCG chrX:19494407-19494527 38 1.84e-05 AATGTGCGGC CAGTGCTG CAGAACGCAG chr2R:13152658-13152778 55 1.84e-05 TACCAGGCAC CAGTGCTG GAAAATGCTA chr2R:24780810-24780930 40 1.84e-05 CGCAATTAGC CAGTGCTG GAAAATGTCT chr3R:8726738-8726858 63 1.84e-05 TATAAGTCGC CAGTGCTG GACAACGTCT chr2L:13289850-13289970 109 1.84e-05 ACTGCTTGGT CAGTGCTG CAAA chr2R:7510175-7510295 22 1.84e-05 AGCTGTTGGC CAGTGCTG CACAGCGCAA chr3R:23348014-23348134 47 1.84e-05 TGTTACTTTA CAGTGCTG TGCAACAGCT chr3L:19642794-19642914 71 1.84e-05 ACTGTATTTT CAGTGCTG CTAAGTTCTG chr3R:25493428-25493548 39 1.84e-05 TCGCAATGTA CAGTGCTG CATAATCCAT chr2L:15118158-15118278 64 1.84e-05 GGTCAGTATT CAGTGCTG TAAGTCGTTG chr3L:19096190-19096310 22 1.84e-05 GCGAGAAGAC CAGTGCTG CAAAACACCA chr2L:1504432-1504552 32 1.84e-05 ACAACAGTGG CAGTGCTG CTAAACGCTT chr2L:10311123-10311243 40 1.84e-05 TTCAGATAAA CAGTGCTG TACAGCACCT chrX:11483370-11483490 111 3.25e-05 CACTAACATG CAGCGTTG CC chr2L:3173107-3173227 68 5.59e-05 GCTCATTTGA CAACACTG CATGTGTGTG chr2R:6656373-6656493 20 5.59e-05 CGCTGTTGTC CAACACTG TTTGCTCAAG chrX:19704125-19704245 40 5.59e-05 GCTCGCCTTG CAACACTG ACCGATGGGG chr3L:2377513-2377633 56 5.59e-05 CGCTGTTAGC CAACACTG AAAAGTGGGC chr2L:5987004-5987124 48 5.59e-05 TTGTGTTGTT CAACACTG ATTGCTCTCC chr2R:6652909-6653029 8 5.59e-05 TGTTTAG CAACACTG GAAACGCCGT chrX:15875712-15875832 64 5.59e-05 TGGTTTTGCA CAACACTG AAAAGAAGAG chr2L:3373403-3373523 96 5.59e-05 GTGTGCTATT CAACACTG ACTGGCCAAA chr3L:14219518-14219638 35 5.59e-05 TACGAATTTC CAACACTG CTAAGTCACA chr3R:5270963-5271083 59 5.59e-05 GCAAACTACT CAACACTG TAATGGGCAA chr2R:13509533-13509653 90 5.59e-05 CGACATTTTA CAACACTG CTGCAACCGC chr3L:7915996-7916116 39 5.59e-05 AAGAAATTTA CAACACTG GTTGGTAGTA chrX:617583-617703 85 5.59e-05 ACACGATGTC CAACACTG GTTGAGCGCG chr3L:3811149-3811269 52 5.59e-05 TAACACCTTA CAACACTG ACCGATATAT chr2R:21481817-21481937 83 5.59e-05 TTTGTCTTTG CAACACTG TTTCCATGGC chr2R:9098466-9098586 49 5.59e-05 CAGCAGTGAC CAACACTG GCGTTATACA chr2R:7653951-7654071 37 5.59e-05 CATGCTTTCC CAACACTG ACTTTAACAC chr2L:8437317-8437437 79 5.59e-05 TGGCCTTGTC CAACACTG TTCAGCCAGC chr2R:17604629-17604749 71 5.59e-05 TTGAATTTTA CAACACTG AATGCACCTA chr2R:24571746-24571866 101 5.59e-05 GACCGTTAAC CAACACTG TTTAATCGGC chrX:18566198-18566318 108 5.59e-05 TGTGTATTGC CAACACTG CCAAC chr2R:21090975-21091095 38 5.59e-05 GAGCGATTTT CAACACTG CTCTTGGTGT chr3R:10571637-10571757 77 5.59e-05 GATCGTTAGC CAACACTG GGCACATCAA chrX:841254-841374 95 5.59e-05 CCACACTTTC CAACACTG CCAATTGCCA chrX:18565996-18566116 63 5.59e-05 GCGCATTTCA CAACACTG TGCCACAGCT chr3L:324685-324805 49 5.59e-05 ATAAATTATC CAACACTG ATTTCTTAAA chrX:8152825-8152945 49 5.59e-05 AAGGTAAGCT CAACACTG CGGTTCGTTA chr3L:5662207-5662327 51 5.59e-05 TAGCCTTTAC CAACACTG AGCTATCGAT chr2L:6663791-6663911 87 5.59e-05 CAGTGTTTGT CAACACTG GTCAATCCAT chr2R:23925106-23925226 105 5.59e-05 GCAGATTGAC CAACACTG CTACTCGA chr2R:22066791-22066911 50 5.59e-05 TTGTCAAACG CAACACTG AAATCCGACT chr3R:14513592-14513712 91 5.59e-05 ACACGTTAGC CAACACTG AACTTAGTTA chr2L:13793448-13793568 60 5.59e-05 AAAAACTTCC CAACACTG CCGACAGCTC chr3R:5611861-5611981 63 5.59e-05 AGACGCTTCC CAACACTG GCGACCGCGC chr3R:29116284-29116404 48 5.59e-05 GAACGCTGTC CAACACTG ACGACATCTA chr3L:4193867-4193987 62 5.59e-05 GCGCATTTTA CAACACTG CCAAACAATG chr3L:8191175-8191295 52 5.59e-05 GTGTGTTTTT CAACACTG TAGGATGGGA chr2L:15764145-15764265 69 5.59e-05 AAGGGCTATT CAACACTG CACACTGTTA chr2L:13182604-13182724 50 5.59e-05 ATGGGCCTTA CAACACTG GTTGTTACTG chr2R:15542584-15542704 58 9.14e-05 TGATTGGAAG CAGTGTTG GACAGCGCTC chr3L:20816043-20816163 36 9.14e-05 TATCGATAAG CAGTGTTG CGCAAAGTGA chrX:11806393-11806513 61 9.14e-05 AGTGGTAGAT CAGTGTTG GAAAGCACGC chr3R:27275176-27275296 71 9.14e-05 AGACAGAGAC CAGTGTTG TGAAAGACCC chr3L:9972644-9972764 84 9.14e-05 TGGTTTCATT CAGTGTTG AATAACGGCC chr3R:29062951-29063071 43 9.14e-05 GGCTATCGAC CAGTGTTG GTAAAATTTC chr2R:12980006-12980126 15 9.14e-05 CGGTCGAGAG CAGTGTTG ATTAACGCCA chr2R:16772661-16772781 31 9.14e-05 CCATGGGCGG CAGTGTTG TAAAACATTT chr3L:9729912-9730032 34 9.14e-05 CTCACTTTGC CAGTGTTG TAAAACCGGG chrX:5329670-5329790 92 9.14e-05 TTGAAGTGAC CAGTGTTG GTTAACCAAT chr2R:16230675-16230795 24 9.14e-05 AAGATTGGGT CAGTGTTG TAAAATGCTA chr3R:19643021-19643141 111 9.14e-05 TCGCCATCGC CAGTGTTG AG chrX:801656-801776 88 9.14e-05 GGTAAACTGA CAGTGTTG GTTAGCGTTC chr2R:16322098-16322218 64 9.14e-05 TCGTTATCGG CAGTGTTG GTAAAGGCCC chr2L:9996578-9996698 7 9.14e-05 TAGTTT CAGTGTTG ACTACACTTA chr4:1064926-1065046 83 9.14e-05 GAAATTGGAC CAGTGTTG GTAAAGGTAA chr3L:2107628-2107748 34 9.14e-05 TTCTCACGCA CAGTGTTG TAAAGCGTCG chr3L:10631053-10631173 30 9.14e-05 ACCGATAAAT CAGTGTTG CAAAAGAGAC chr3R:20762565-20762685 98 9.14e-05 ATTTAGTTAC CAGTGTTG CAAAACAAGC chrX:1868778-1868898 47 9.14e-05 GGCTTTGTGA CAGTGTTG CACAGCGCTC chrX:19746000-19746120 47 9.14e-05 GTCCGAACGC CAGTGTTG GACAACATGT chr2L:12096494-12096614 30 9.14e-05 CTGTGTGGGG CAGTGTTG GAAAACGTGC chr2L:21179779-21179899 106 9.14e-05 tCTGTTTGTA CAGTGTTG ACAAACG chr2L:1732287-1732407 39 9.14e-05 CGTGCAAGTA CAGTGTTG AACAGCGTTC chr2R:9039570-9039690 88 9.14e-05 CGATTCGCGG CAGTGTTG AAAAAGGCTT chrX:8407256-8407376 40 9.14e-05 TGCTGCCTAG CAGTGTTG TATAACTTGT chr2R:7712023-7712143 64 9.14e-05 AGACGGCAAA CAGTGTTG ATCAACGATC chr3R:23996351-23996471 47 9.14e-05 TGTTGTCTGG CAGTGTTG TAAAACTCGC chr2R:24188198-24188318 53 9.14e-05 ATTTTCCGGC CAGTGTTG GTAAACCCAC chr3R:16482405-16482525 50 9.14e-05 TTGTCGCAGC CAGTGTTG GCTAACGTCA chr3R:22446610-22446730 74 9.14e-05 GCCCTTGTTT CAGTGTTG TATAGGGCGA chr2L:15272421-15272541 50 9.14e-05 GTCTAGCTAA CAGTGTTG CAAAATTCGT chr2L:1728650-1728770 86 9.14e-05 CTGACAATGG CAGTGTTG GAAAGTCCTC chr3L:833987-834107 84 9.14e-05 ATGGAATTGT CAGTGTTG TAAAACCTGA chrX:15572091-15572211 39 9.14e-05 AGCTGTTTAC CAGTGTTG CGAAATACTG chr2R:13205323-13205443 49 9.14e-05 AAACGGGCGG CAGTGTTG GCTAACGACT chrX:4636190-4636310 96 9.14e-05 GGTTCGGACG CAGTGTTG GCTAACGATG chr3R:9763662-9763782 95 9.14e-05 ATTGCGCGCG CAGTGTTG AAAAGTGTGT chr2R:7512739-7512859 40 9.14e-05 ACCGGATGGT CAGTGTTG GGAAGATACC chr2L:19530283-19530403 18 9.14e-05 CTGTCTATTA CAGTGTTG CATGATAACC chr3R:29503864-29503984 105 9.14e-05 CTGATATGTC CAGTGTTG ACTAGTGC chr2L:11120289-11120409 1 1.03e-04 . CAACGTTG ACAGGCACCA chr3L:9614078-9614198 23 1.50e-04 GCGCCAAGTT CAGTATTG GAAAACACTA chr2R:16344388-16344508 101 1.69e-04 CCAACACCGA CAACATTG CGGAACTCCA chr2R:9251950-9252070 21 2.00e-04 TGAGCCTTTC CAGCACTA GTAACATTAC chr2R:13239434-13239554 67 2.00e-04 TGTCGTTTTC CAGCACTA CATCAGGGAT chr3L:15988147-15988267 98 2.22e-04 ACCACACATT CAGTGCTA TCAGCTTGCA chr2R:7407156-7407276 5 2.22e-04 ATTG CAGCGCTT TAGAACACTG chrX:5754972-5755092 70 2.22e-04 ACCGCCAAGC CAGTGCTA GAAAGCACCA chr2L:6622782-6622902 88 2.73e-04 TAGTGTTGTG TAGCGCTG TTAAAAGAAG chr2R:22492139-22492259 43 2.73e-04 CTATCGATTA CAACGCTA GAACATGTGT chr2R:18710839-18710959 92 2.73e-04 AGCTGACTAC CAATATTG TTATCGATAT chr3L:8304085-8304205 8 2.88e-04 TGTTGTA CCGCGCTG ATTCTTCGCA chr2L:3480561-3480681 75 2.88e-04 GTCTACTTTT CAGCGTTA GCGCATAAAG chr3R:17053539-17053659 70 3.23e-04 CTATTTCCAA CGGCACTG CCAGCATGAA chr3L:5368046-5368166 94 3.23e-04 GTTATATCTT CAGCACTT ATATTTATTT chrX:11572427-11572547 25 3.47e-04 TGCCAACACC CATCGCTG ATCCAGTGAT chrX:9605946-9606066 52 3.47e-04 ATAAGTGGCG CGGTGCTG GTAAGCGCGA chr2R:9116530-9116650 83 3.78e-04 CGGCGCTTAA CAACACTA TCATCCGCCA chrX:15759889-15760009 68 3.78e-04 GCGCACTTTA CAACACTA TGTGCATAAG chr3L:10686771-10686891 64 3.78e-04 CATTGCTACC CAACACTA CTCACCTGTC chr2R:4782838-4782958 64 3.78e-04 TAGGATTACC CAACACTA GTGTGCATAC chr3R:18385742-18385862 61 3.78e-04 TGCTGTTTTC CAACACTA AGTTGACCGC chr2L:155238-155358 66 3.78e-04 GCGCGCTAAC CAACACTA TCAGCTGTCG chr4:721931-722051 6 3.78e-04 TTATC CAACACTA CTGAAGTGAA chrX:11359094-11359214 66 3.78e-04 GGACACTTTG CAACACTA AGCCCGAAAA chr3R:15363786-15363906 57 3.78e-04 TGGTGATTTG CAACACTA CACGAAATGG chr3L:20393530-20393650 54 3.78e-04 GTTACCTTTG CAACACTA CGAAATTTCC chr2R:17048770-17048890 59 3.78e-04 ACCGCTTTTG CAACACTA CTGAGTTTAT chr3R:15839450-15839570 55 3.78e-04 TAAGCTTTTA CAACACTA GCCGGGGAGT chr3R:13699494-13699614 69 3.78e-04 GCTCGCTTTT CAACACTA CTTGACGTGT chr2R:6653128-6653248 95 4.49e-04 AGCCCTGTGG CAACGCTT CGATTTCCAA chr3R:25335196-25335316 40 4.49e-04 GCTGAGTGAG TAGTGCTG AAAAACGCGG chr2R:9103152-9103272 67 4.97e-04 TGCAATGTGA CCGTGCTG CTGATTGTGT chr2R:12198843-12198963 18 4.97e-04 TTCCCTCTTT CAGTGTTA CCAGCTGTTG chr4:879217-879337 98 4.97e-04 TTTTTATTTT CAGTGTTA GAAATTGATT chr2L:16356890-16357010 78 4.97e-04 AAAAATCCTT CAGAGCTG CCAGATAAGT chr3R:28811329-28811449 18 4.97e-04 ATTTTGAGAA CAGTGTTA GAAGACGCGC chr2R:12431068-12431188 7 4.97e-04 TTCTAG CAGTGTTA CCAGATTGTA chr2R:18627807-18627927 44 5.90e-04 GCTAGAGCTC CATCACTG TCGGCGAATG chr4:869478-869598 87 5.90e-04 AAATAAAGAT CAACGTTA CGGACGAAAT chr3R:26056508-26056628 76 5.90e-04 TGACGTTTTT CATCACTG TTTCATTTGT chr2L:19565582-19565702 36 5.90e-04 GCTAAACGGC CATCACTG TTGCATTAAA chrX:10385856-10385976 4 6.06e-04 CTC CCGCGTTG CTGAGCACTG chr4:1053961-1054081 41 6.85e-04 CAACGTTTCA CAACACTT TGTCATGCGC chr3R:11796945-11797065 30 6.85e-04 ACGAATTATC CAACACTT TCTGCATCAG chr2L:16732464-16732584 64 6.85e-04 CGCAGTTAAT CAACACTT GTTGAGTGCC chr2L:2220652-2220772 46 6.85e-04 TCGTGTTTTG CAACACTT TCAGGTAGTA chr2R:8891647-8891767 58 6.85e-04 ATATATTTTG CAATACTA TTTACTCTTA chr3R:14315901-14316021 37 6.85e-04 CTTAATACTT TAGTACTG CCCAACACAG chr2R:9836859-9836979 79 6.85e-04 TCGAATTTTC CAACACTT GCGCTTGTAA chr2L:811505-811625 62 6.85e-04 CGGCGCTTTC CAACACTT CGATGCGTGT chr2L:18682055-18682175 67 6.85e-04 TATCATTATC CAACACTT GGATTTTAAA chrX:10219963-10220083 72 6.85e-04 TAGCATTAAT CAACACTT GCAATATCGA chrX:19762335-19762455 43 7.95e-04 CTCGTCGATG CAGCCCTG GTCAATTCGT chr3L:16390907-16391027 61 7.95e-04 TTACCGTTTG CAGAACTG GTTGGCTTGG chr2L:21166580-21166700 62 8.54e-04 CAGCTGGTGG CGGTGTTG CAAAATGCCG chr3R:7902643-7902763 54 8.54e-04 GTTGGATGGT CGGTGTTG GAAAACACAC chrX:8177115-8177235 88 8.54e-04 GCCATCAAAA CGGTGTTG GGCAACGCAA chr3L:1602659-1602779 42 9.44e-04 CAGTATTTTC AAGCACTG GCTTGCTCCT chr2R:6807551-6807671 78 9.44e-04 GCCGCCACGG CCACACTG CACCCTCAGT chr2R:12037207-12037327 72 1.08e-03 GAATCGACCA CATTACTG AACAAATCGA chr2R:9237859-9237979 60 1.08e-03 TTTCCAACTT CAATGTTA TAGATGCGCA chr2L:21142330-21142450 108 1.08e-03 GACTATTCTG CAACGTTT TTGTT chrX:11905369-11905489 31 1.08e-03 CATCAATCGC TAGTGTTG GGCAAGTTGA chr2R:10838712-10838832 69 1.08e-03 CAGTTGGCCT TAGTGTTG AACAACGCAC chr3R:29835439-29835559 112 1.08e-03 ACGTTTTTTT AAGTGCTG C chr2L:18677098-18677218 29 1.08e-03 CCCCGCCATT TAGTGTTG GCAAGCGTCG chr2L:7782806-7782926 12 1.08e-03 CAATTGCTTT TAGTGTTG GAAAGCAAAT chr3R:10045510-10045630 76 1.08e-03 AATTACCGGG TAGTGTTG TTAGCAATAC chr2R:20278903-20279023 67 1.08e-03 AGTGCTAAAT TAGTGTTG GAAAATATGG chr3L:11630819-11630939 38 1.08e-03 ATTTTGATGG TAGTGTTG CATAACGTTG chr3R:25594255-25594375 79 1.08e-03 TAGCTAGTTG TAGTGTTG GCAAACGTAC chrX:17842045-17842165 41 1.10e-03 TGGCCAGAGC CAGAGTTG CCACCCTGCA chrX:20159982-20160102 105 1.18e-03 AGCGGGTTGC TAACGTTG CCACCTGT chrX:616912-617032 77 1.18e-03 GGGAACTATG CAATACTT AAAATGCAAC chrX:16651197-16651317 111 1.27e-03 ACTACGGTTA CGGTATTG AA chr2R:7972313-7972433 43 1.53e-03 TTTTTTATGT CAACATTT TCATGTGGTT chr3R:16004159-16004279 10 1.87e-03 TGAGTTGTT AAGTGTTG TTAAGTATTT chr3L:11711407-11711527 68 1.87e-03 TATACTAACT AAGTGTTG GTCAACACAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:4367471-4367591 4.2e-06 61_[+1]_51 chr2R:12182571-12182691 4.2e-06 19_[+1]_93 chr3L:8125110-8125230 1.1e-05 47_[+1]_65 chr2R:16291440-16291560 1.1e-05 75_[+1]_37 chr3L:8338951-8339071 1.1e-05 61_[+1]_51 chr3R:11429942-11430062 1.1e-05 88_[+1]_24 chr2L:8198853-8198973 1.1e-05 54_[+1]_58 chrX:11137043-11137163 1.1e-05 14_[+1]_98 chr2L:5907018-5907138 1.1e-05 29_[+1]_83 chr2R:16149856-16149976 1.1e-05 42_[+1]_70 chr3L:11728241-11728361 1.1e-05 89_[+1]_23 chr2L:8438198-8438318 1.1e-05 75_[+1]_37 chr3R:30423858-30423978 1.1e-05 57_[+1]_55 chr2L:1166413-1166533 1.1e-05 72_[+1]_40 chr2R:13235890-13236010 1.1e-05 83_[+1]_29 chrX:17423455-17423575 1.1e-05 15_[+1]_97 chr3R:23763218-23763338 1.1e-05 67_[+1]_45 chr3R:8723105-8723225 1.1e-05 49_[+1]_63 chr2R:10437887-10438007 1.8e-05 18_[+1]_94 chr2R:18660625-18660745 1.8e-05 67_[+1]_45 chr2L:4224214-4224334 1.8e-05 45_[+1]_67 chrX:1476962-1477082 1.8e-05 99_[+1]_13 chrX:19494407-19494527 1.8e-05 37_[+1]_75 chr2R:13152658-13152778 1.8e-05 54_[+1]_58 chr2R:24780810-24780930 1.8e-05 39_[+1]_73 chr3R:8726738-8726858 1.8e-05 62_[+1]_50 chr2L:13289850-13289970 1.8e-05 108_[+1]_4 chr2R:7510175-7510295 1.8e-05 21_[+1]_91 chr3R:23348014-23348134 1.8e-05 46_[+1]_66 chr3L:19642794-19642914 1.8e-05 70_[+1]_42 chr3R:25493428-25493548 1.8e-05 38_[+1]_74 chr2L:15118158-15118278 1.8e-05 63_[+1]_49 chr3L:19096190-19096310 1.8e-05 21_[+1]_91 chr2L:1504432-1504552 1.8e-05 31_[+1]_81 chr2L:10311123-10311243 1.8e-05 39_[+1]_73 chrX:11483370-11483490 3.3e-05 110_[+1]_2 chr2L:3173107-3173227 5.6e-05 67_[+1]_45 chr2R:6656373-6656493 5.6e-05 19_[+1]_93 chrX:19704125-19704245 5.6e-05 39_[+1]_73 chr3L:2377513-2377633 5.6e-05 55_[+1]_57 chr2L:5987004-5987124 5.6e-05 47_[+1]_65 chr2R:6652909-6653029 5.6e-05 7_[+1]_105 chrX:15875712-15875832 5.6e-05 63_[+1]_49 chr2L:3373403-3373523 5.6e-05 95_[+1]_17 chr3L:14219518-14219638 5.6e-05 34_[+1]_78 chr3R:5270963-5271083 5.6e-05 58_[+1]_54 chr2R:13509533-13509653 5.6e-05 89_[+1]_23 chr3L:7915996-7916116 5.6e-05 38_[+1]_74 chrX:617583-617703 5.6e-05 84_[+1]_28 chr3L:3811149-3811269 5.6e-05 51_[+1]_61 chr2R:21481817-21481937 5.6e-05 82_[+1]_30 chr2R:9098466-9098586 5.6e-05 48_[+1]_64 chr2R:7653951-7654071 5.6e-05 36_[+1]_76 chr2L:8437317-8437437 5.6e-05 78_[+1]_34 chr2R:17604629-17604749 5.6e-05 70_[+1]_42 chr2R:24571746-24571866 5.6e-05 100_[+1]_12 chrX:18566198-18566318 5.6e-05 107_[+1]_5 chr2R:21090975-21091095 5.6e-05 37_[+1]_75 chr3R:10571637-10571757 5.6e-05 76_[+1]_36 chrX:841254-841374 5.6e-05 94_[+1]_18 chrX:18565996-18566116 5.6e-05 62_[+1]_50 chr3L:324685-324805 5.6e-05 48_[+1]_64 chrX:8152825-8152945 5.6e-05 48_[+1]_64 chr3L:5662207-5662327 5.6e-05 50_[+1]_62 chr2L:6663791-6663911 5.6e-05 86_[+1]_26 chr2R:23925106-23925226 5.6e-05 104_[+1]_8 chr2R:22066791-22066911 5.6e-05 49_[+1]_63 chr3R:14513592-14513712 5.6e-05 90_[+1]_22 chr2L:13793448-13793568 5.6e-05 59_[+1]_53 chr3R:5611861-5611981 5.6e-05 62_[+1]_50 chr3R:29116284-29116404 5.6e-05 47_[+1]_65 chr3L:4193867-4193987 5.6e-05 61_[+1]_51 chr3L:8191175-8191295 5.6e-05 51_[+1]_61 chr2L:15764145-15764265 5.6e-05 68_[+1]_44 chr2L:13182604-13182724 5.6e-05 49_[+1]_63 chr2R:15542584-15542704 9.1e-05 57_[+1]_55 chr3L:20816043-20816163 9.1e-05 35_[+1]_77 chrX:11806393-11806513 9.1e-05 60_[+1]_52 chr3R:27275176-27275296 9.1e-05 70_[+1]_42 chr3L:9972644-9972764 9.1e-05 83_[+1]_29 chr3R:29062951-29063071 9.1e-05 42_[+1]_70 chr2R:12980006-12980126 9.1e-05 14_[+1]_98 chr2R:16772661-16772781 9.1e-05 30_[+1]_82 chr3L:9729912-9730032 9.1e-05 33_[+1]_79 chrX:5329670-5329790 9.1e-05 91_[+1]_21 chr2R:16230675-16230795 9.1e-05 23_[+1]_89 chr3R:19643021-19643141 9.1e-05 110_[+1]_2 chrX:801656-801776 9.1e-05 87_[+1]_25 chr2R:16322098-16322218 9.1e-05 63_[+1]_49 chr2L:9996578-9996698 9.1e-05 6_[+1]_106 chr4:1064926-1065046 9.1e-05 82_[+1]_30 chr3L:2107628-2107748 9.1e-05 33_[+1]_79 chr3L:10631053-10631173 9.1e-05 29_[+1]_83 chr3R:20762565-20762685 9.1e-05 97_[+1]_15 chrX:1868778-1868898 9.1e-05 46_[+1]_66 chrX:19746000-19746120 9.1e-05 46_[+1]_66 chr2L:12096494-12096614 9.1e-05 29_[+1]_83 chr2L:21179779-21179899 9.1e-05 105_[+1]_7 chr2L:1732287-1732407 9.1e-05 38_[+1]_74 chr2R:9039570-9039690 9.1e-05 87_[+1]_25 chrX:8407256-8407376 9.1e-05 39_[+1]_73 chr2R:7712023-7712143 9.1e-05 63_[+1]_49 chr3R:23996351-23996471 9.1e-05 46_[+1]_66 chr2R:24188198-24188318 9.1e-05 52_[+1]_60 chr3R:16482405-16482525 9.1e-05 49_[+1]_63 chr3R:22446610-22446730 9.1e-05 73_[+1]_39 chr2L:15272421-15272541 9.1e-05 49_[+1]_63 chr2L:1728650-1728770 9.1e-05 85_[+1]_27 chr3L:833987-834107 9.1e-05 83_[+1]_29 chrX:15572091-15572211 9.1e-05 38_[+1]_74 chr2R:13205323-13205443 9.1e-05 48_[+1]_64 chrX:4636190-4636310 9.1e-05 95_[+1]_17 chr3R:9763662-9763782 9.1e-05 94_[+1]_18 chr2R:7512739-7512859 9.1e-05 39_[+1]_73 chr2L:19530283-19530403 9.1e-05 17_[+1]_95 chr3R:29503864-29503984 9.1e-05 104_[+1]_8 chr2L:11120289-11120409 0.0001 [+1]_112 chr3L:9614078-9614198 0.00015 22_[+1]_90 chr2R:16344388-16344508 0.00017 100_[+1]_12 chr2R:9251950-9252070 0.0002 20_[+1]_92 chr2R:13239434-13239554 0.0002 66_[+1]_46 chr3L:15988147-15988267 0.00022 97_[+1]_15 chr2R:7407156-7407276 0.00022 4_[+1]_108 chrX:5754972-5755092 0.00022 69_[+1]_43 chr2L:6622782-6622902 0.00027 87_[+1]_25 chr2R:22492139-22492259 0.00027 42_[+1]_70 chr2R:18710839-18710959 0.00027 91_[+1]_21 chr3L:8304085-8304205 0.00029 7_[+1]_105 chr2L:3480561-3480681 0.00029 74_[+1]_38 chr3R:17053539-17053659 0.00032 69_[+1]_43 chr3L:5368046-5368166 0.00032 93_[+1]_19 chrX:11572427-11572547 0.00035 24_[+1]_88 chrX:9605946-9606066 0.00035 51_[+1]_61 chr2R:9116530-9116650 0.00038 82_[+1]_30 chrX:15759889-15760009 0.00038 67_[+1]_45 chr3L:10686771-10686891 0.00038 63_[+1]_49 chr2R:4782838-4782958 0.00038 63_[+1]_49 chr3R:18385742-18385862 0.00038 60_[+1]_52 chr2L:155238-155358 0.00038 65_[+1]_47 chr4:721931-722051 0.00038 5_[+1]_107 chrX:11359094-11359214 0.00038 65_[+1]_47 chr3R:15363786-15363906 0.00038 56_[+1]_56 chr3L:20393530-20393650 0.00038 53_[+1]_59 chr2R:17048770-17048890 0.00038 58_[+1]_54 chr3R:15839450-15839570 0.00038 54_[+1]_58 chr3R:13699494-13699614 0.00038 68_[+1]_44 chr2R:6653128-6653248 0.00045 94_[+1]_18 chr3R:25335196-25335316 0.00045 39_[+1]_73 chr2R:9103152-9103272 0.0005 66_[+1]_46 chr2R:12198843-12198963 0.0005 17_[+1]_95 chr4:879217-879337 0.0005 97_[+1]_15 chr2L:16356890-16357010 0.0005 77_[+1]_35 chr3R:28811329-28811449 0.0005 17_[+1]_95 chr2R:12431068-12431188 0.0005 6_[+1]_106 chr2R:18627807-18627927 0.00059 43_[+1]_69 chr4:869478-869598 0.00059 86_[+1]_26 chr3R:26056508-26056628 0.00059 75_[+1]_37 chr2L:19565582-19565702 0.00059 35_[+1]_77 chrX:10385856-10385976 0.00061 3_[+1]_109 chr4:1053961-1054081 0.00068 40_[+1]_72 chr3R:11796945-11797065 0.00068 29_[+1]_83 chr2L:16732464-16732584 0.00068 63_[+1]_49 chr2L:2220652-2220772 0.00068 45_[+1]_67 chr2R:8891647-8891767 0.00068 57_[+1]_55 chr3R:14315901-14316021 0.00068 36_[+1]_76 chr2R:9836859-9836979 0.00068 78_[+1]_34 chr2L:811505-811625 0.00068 61_[+1]_51 chr2L:18682055-18682175 0.00068 66_[+1]_46 chrX:10219963-10220083 0.00068 71_[+1]_41 chrX:19762335-19762455 0.00079 42_[+1]_70 chr3L:16390907-16391027 0.00079 60_[+1]_52 chr2L:21166580-21166700 0.00085 61_[+1]_51 chr3R:7902643-7902763 0.00085 53_[+1]_59 chrX:8177115-8177235 0.00085 87_[+1]_25 chr3L:1602659-1602779 0.00094 41_[+1]_71 chr2R:6807551-6807671 0.00094 77_[+1]_35 chr2R:12037207-12037327 0.0011 71_[+1]_41 chr2R:9237859-9237979 0.0011 59_[+1]_53 chr2L:21142330-21142450 0.0011 107_[+1]_5 chrX:11905369-11905489 0.0011 30_[+1]_82 chr2R:10838712-10838832 0.0011 68_[+1]_44 chr3R:29835439-29835559 0.0011 111_[+1]_1 chr2L:18677098-18677218 0.0011 28_[+1]_84 chr2L:7782806-7782926 0.0011 11_[+1]_101 chr3R:10045510-10045630 0.0011 75_[+1]_37 chr2R:20278903-20279023 0.0011 66_[+1]_46 chr3L:11630819-11630939 0.0011 37_[+1]_75 chr3R:25594255-25594375 0.0011 78_[+1]_34 chrX:17842045-17842165 0.0011 40_[+1]_72 chrX:20159982-20160102 0.0012 104_[+1]_8 chrX:616912-617032 0.0012 76_[+1]_36 chrX:16651197-16651317 0.0013 110_[+1]_2 chr2R:7972313-7972433 0.0015 42_[+1]_70 chr3R:16004159-16004279 0.0019 9_[+1]_103 chr3L:11711407-11711527 0.0019 67_[+1]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CARYRYTG width=8 seqs=195 chr3L:4367471-4367591 ( 62) CAGCGCTG 1 chr2R:12182571-12182691 ( 20) CAGCGCTG 1 chr3L:8125110-8125230 ( 48) CAGCACTG 1 chr2R:16291440-16291560 ( 76) CAGCACTG 1 chr3L:8338951-8339071 ( 62) CAGCACTG 1 chr3R:11429942-11430062 ( 89) CAGCACTG 1 chr2L:8198853-8198973 ( 55) CAGCACTG 1 chrX:11137043-11137163 ( 15) CAGCACTG 1 chr2L:5907018-5907138 ( 30) CAGCACTG 1 chr2R:16149856-16149976 ( 43) CAGCACTG 1 chr3L:11728241-11728361 ( 90) CAGCACTG 1 chr2L:8438198-8438318 ( 76) CAGCACTG 1 chr3R:30423858-30423978 ( 58) CAGCACTG 1 chr2L:1166413-1166533 ( 73) CAGCACTG 1 chr2R:13235890-13236010 ( 84) CAGCACTG 1 chrX:17423455-17423575 ( 16) CAGCACTG 1 chr3R:23763218-23763338 ( 68) CAGCACTG 1 chr3R:8723105-8723225 ( 50) CAGCACTG 1 chr2R:10437887-10438007 ( 19) CAGTGCTG 1 chr2R:18660625-18660745 ( 68) CAGTGCTG 1 chr2L:4224214-4224334 ( 46) CAGTGCTG 1 chrX:1476962-1477082 ( 100) CAGTGCTG 1 chrX:19494407-19494527 ( 38) CAGTGCTG 1 chr2R:13152658-13152778 ( 55) CAGTGCTG 1 chr2R:24780810-24780930 ( 40) CAGTGCTG 1 chr3R:8726738-8726858 ( 63) CAGTGCTG 1 chr2L:13289850-13289970 ( 109) CAGTGCTG 1 chr2R:7510175-7510295 ( 22) CAGTGCTG 1 chr3R:23348014-23348134 ( 47) CAGTGCTG 1 chr3L:19642794-19642914 ( 71) CAGTGCTG 1 chr3R:25493428-25493548 ( 39) CAGTGCTG 1 chr2L:15118158-15118278 ( 64) CAGTGCTG 1 chr3L:19096190-19096310 ( 22) CAGTGCTG 1 chr2L:1504432-1504552 ( 32) CAGTGCTG 1 chr2L:10311123-10311243 ( 40) CAGTGCTG 1 chrX:11483370-11483490 ( 111) CAGCGTTG 1 chr2L:3173107-3173227 ( 68) CAACACTG 1 chr2R:6656373-6656493 ( 20) CAACACTG 1 chrX:19704125-19704245 ( 40) CAACACTG 1 chr3L:2377513-2377633 ( 56) CAACACTG 1 chr2L:5987004-5987124 ( 48) CAACACTG 1 chr2R:6652909-6653029 ( 8) CAACACTG 1 chrX:15875712-15875832 ( 64) CAACACTG 1 chr2L:3373403-3373523 ( 96) CAACACTG 1 chr3L:14219518-14219638 ( 35) CAACACTG 1 chr3R:5270963-5271083 ( 59) CAACACTG 1 chr2R:13509533-13509653 ( 90) CAACACTG 1 chr3L:7915996-7916116 ( 39) CAACACTG 1 chrX:617583-617703 ( 85) CAACACTG 1 chr3L:3811149-3811269 ( 52) CAACACTG 1 chr2R:21481817-21481937 ( 83) CAACACTG 1 chr2R:9098466-9098586 ( 49) CAACACTG 1 chr2R:7653951-7654071 ( 37) CAACACTG 1 chr2L:8437317-8437437 ( 79) CAACACTG 1 chr2R:17604629-17604749 ( 71) CAACACTG 1 chr2R:24571746-24571866 ( 101) CAACACTG 1 chrX:18566198-18566318 ( 108) CAACACTG 1 chr2R:21090975-21091095 ( 38) CAACACTG 1 chr3R:10571637-10571757 ( 77) CAACACTG 1 chrX:841254-841374 ( 95) CAACACTG 1 chrX:18565996-18566116 ( 63) CAACACTG 1 chr3L:324685-324805 ( 49) CAACACTG 1 chrX:8152825-8152945 ( 49) CAACACTG 1 chr3L:5662207-5662327 ( 51) CAACACTG 1 chr2L:6663791-6663911 ( 87) CAACACTG 1 chr2R:23925106-23925226 ( 105) CAACACTG 1 chr2R:22066791-22066911 ( 50) CAACACTG 1 chr3R:14513592-14513712 ( 91) CAACACTG 1 chr2L:13793448-13793568 ( 60) CAACACTG 1 chr3R:5611861-5611981 ( 63) CAACACTG 1 chr3R:29116284-29116404 ( 48) CAACACTG 1 chr3L:4193867-4193987 ( 62) CAACACTG 1 chr3L:8191175-8191295 ( 52) CAACACTG 1 chr2L:15764145-15764265 ( 69) CAACACTG 1 chr2L:13182604-13182724 ( 50) CAACACTG 1 chr2R:15542584-15542704 ( 58) CAGTGTTG 1 chr3L:20816043-20816163 ( 36) CAGTGTTG 1 chrX:11806393-11806513 ( 61) CAGTGTTG 1 chr3R:27275176-27275296 ( 71) CAGTGTTG 1 chr3L:9972644-9972764 ( 84) CAGTGTTG 1 chr3R:29062951-29063071 ( 43) CAGTGTTG 1 chr2R:12980006-12980126 ( 15) CAGTGTTG 1 chr2R:16772661-16772781 ( 31) CAGTGTTG 1 chr3L:9729912-9730032 ( 34) CAGTGTTG 1 chrX:5329670-5329790 ( 92) CAGTGTTG 1 chr2R:16230675-16230795 ( 24) CAGTGTTG 1 chr3R:19643021-19643141 ( 111) CAGTGTTG 1 chrX:801656-801776 ( 88) CAGTGTTG 1 chr2R:16322098-16322218 ( 64) CAGTGTTG 1 chr2L:9996578-9996698 ( 7) CAGTGTTG 1 chr4:1064926-1065046 ( 83) CAGTGTTG 1 chr3L:2107628-2107748 ( 34) CAGTGTTG 1 chr3L:10631053-10631173 ( 30) CAGTGTTG 1 chr3R:20762565-20762685 ( 98) CAGTGTTG 1 chrX:1868778-1868898 ( 47) CAGTGTTG 1 chrX:19746000-19746120 ( 47) CAGTGTTG 1 chr2L:12096494-12096614 ( 30) CAGTGTTG 1 chr2L:21179779-21179899 ( 106) CAGTGTTG 1 chr2L:1732287-1732407 ( 39) CAGTGTTG 1 chr2R:9039570-9039690 ( 88) CAGTGTTG 1 chrX:8407256-8407376 ( 40) CAGTGTTG 1 chr2R:7712023-7712143 ( 64) CAGTGTTG 1 chr3R:23996351-23996471 ( 47) CAGTGTTG 1 chr2R:24188198-24188318 ( 53) CAGTGTTG 1 chr3R:16482405-16482525 ( 50) CAGTGTTG 1 chr3R:22446610-22446730 ( 74) CAGTGTTG 1 chr2L:15272421-15272541 ( 50) CAGTGTTG 1 chr2L:1728650-1728770 ( 86) CAGTGTTG 1 chr3L:833987-834107 ( 84) CAGTGTTG 1 chrX:15572091-15572211 ( 39) CAGTGTTG 1 chr2R:13205323-13205443 ( 49) CAGTGTTG 1 chrX:4636190-4636310 ( 96) CAGTGTTG 1 chr3R:9763662-9763782 ( 95) CAGTGTTG 1 chr2R:7512739-7512859 ( 40) CAGTGTTG 1 chr2L:19530283-19530403 ( 18) CAGTGTTG 1 chr3R:29503864-29503984 ( 105) CAGTGTTG 1 chr2L:11120289-11120409 ( 1) CAACGTTG 1 chr3L:9614078-9614198 ( 23) CAGTATTG 1 chr2R:16344388-16344508 ( 101) CAACATTG 1 chr2R:9251950-9252070 ( 21) CAGCACTA 1 chr2R:13239434-13239554 ( 67) CAGCACTA 1 chr3L:15988147-15988267 ( 98) CAGTGCTA 1 chr2R:7407156-7407276 ( 5) CAGCGCTT 1 chrX:5754972-5755092 ( 70) CAGTGCTA 1 chr2L:6622782-6622902 ( 88) TAGCGCTG 1 chr2R:22492139-22492259 ( 43) CAACGCTA 1 chr2R:18710839-18710959 ( 92) CAATATTG 1 chr3L:8304085-8304205 ( 8) CCGCGCTG 1 chr2L:3480561-3480681 ( 75) CAGCGTTA 1 chr3R:17053539-17053659 ( 70) CGGCACTG 1 chr3L:5368046-5368166 ( 94) CAGCACTT 1 chrX:11572427-11572547 ( 25) CATCGCTG 1 chrX:9605946-9606066 ( 52) CGGTGCTG 1 chr2R:9116530-9116650 ( 83) CAACACTA 1 chrX:15759889-15760009 ( 68) CAACACTA 1 chr3L:10686771-10686891 ( 64) CAACACTA 1 chr2R:4782838-4782958 ( 64) CAACACTA 1 chr3R:18385742-18385862 ( 61) CAACACTA 1 chr2L:155238-155358 ( 66) CAACACTA 1 chr4:721931-722051 ( 6) CAACACTA 1 chrX:11359094-11359214 ( 66) CAACACTA 1 chr3R:15363786-15363906 ( 57) CAACACTA 1 chr3L:20393530-20393650 ( 54) CAACACTA 1 chr2R:17048770-17048890 ( 59) CAACACTA 1 chr3R:15839450-15839570 ( 55) CAACACTA 1 chr3R:13699494-13699614 ( 69) CAACACTA 1 chr2R:6653128-6653248 ( 95) CAACGCTT 1 chr3R:25335196-25335316 ( 40) TAGTGCTG 1 chr2R:9103152-9103272 ( 67) CCGTGCTG 1 chr2R:12198843-12198963 ( 18) CAGTGTTA 1 chr4:879217-879337 ( 98) CAGTGTTA 1 chr2L:16356890-16357010 ( 78) CAGAGCTG 1 chr3R:28811329-28811449 ( 18) CAGTGTTA 1 chr2R:12431068-12431188 ( 7) CAGTGTTA 1 chr2R:18627807-18627927 ( 44) CATCACTG 1 chr4:869478-869598 ( 87) CAACGTTA 1 chr3R:26056508-26056628 ( 76) CATCACTG 1 chr2L:19565582-19565702 ( 36) CATCACTG 1 chrX:10385856-10385976 ( 4) CCGCGTTG 1 chr4:1053961-1054081 ( 41) CAACACTT 1 chr3R:11796945-11797065 ( 30) CAACACTT 1 chr2L:16732464-16732584 ( 64) CAACACTT 1 chr2L:2220652-2220772 ( 46) CAACACTT 1 chr2R:8891647-8891767 ( 58) CAATACTA 1 chr3R:14315901-14316021 ( 37) TAGTACTG 1 chr2R:9836859-9836979 ( 79) CAACACTT 1 chr2L:811505-811625 ( 62) CAACACTT 1 chr2L:18682055-18682175 ( 67) CAACACTT 1 chrX:10219963-10220083 ( 72) CAACACTT 1 chrX:19762335-19762455 ( 43) CAGCCCTG 1 chr3L:16390907-16391027 ( 61) CAGAACTG 1 chr2L:21166580-21166700 ( 62) CGGTGTTG 1 chr3R:7902643-7902763 ( 54) CGGTGTTG 1 chrX:8177115-8177235 ( 88) CGGTGTTG 1 chr3L:1602659-1602779 ( 42) AAGCACTG 1 chr2R:6807551-6807671 ( 78) CCACACTG 1 chr2R:12037207-12037327 ( 72) CATTACTG 1 chr2R:9237859-9237979 ( 60) CAATGTTA 1 chr2L:21142330-21142450 ( 108) CAACGTTT 1 chrX:11905369-11905489 ( 31) TAGTGTTG 1 chr2R:10838712-10838832 ( 69) TAGTGTTG 1 chr3R:29835439-29835559 ( 112) AAGTGCTG 1 chr2L:18677098-18677218 ( 29) TAGTGTTG 1 chr2L:7782806-7782926 ( 12) TAGTGTTG 1 chr3R:10045510-10045630 ( 76) TAGTGTTG 1 chr2R:20278903-20279023 ( 67) TAGTGTTG 1 chr3L:11630819-11630939 ( 38) TAGTGTTG 1 chr3R:25594255-25594375 ( 79) TAGTGTTG 1 chrX:17842045-17842165 ( 41) CAGAGTTG 1 chrX:20159982-20160102 ( 105) TAACGTTG 1 chrX:616912-617032 ( 77) CAATACTT 1 chrX:16651197-16651317 ( 111) CGGTATTG 1 chr2R:7972313-7972433 ( 43) CAACATTT 1 chr3R:16004159-16004279 ( 10) AAGTGTTG 1 chr3L:11711407-11711527 ( 68) AAGTGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 7.63509 E= 2.0e-131 -391 229 -1425 -236 162 -320 -260 -1425 28 -1425 168 -362 -433 149 -1425 53 66 -519 144 -1425 -1425 175 -1425 23 -1425 -1425 -1425 166 -121 -1425 209 -214 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 195 E= 2.0e-131 0.020513 0.917949 0.000000 0.061538 0.948718 0.020513 0.030769 0.000000 0.374359 0.000000 0.600000 0.025641 0.015385 0.528205 0.000000 0.456410 0.487179 0.005128 0.507692 0.000000 0.000000 0.630769 0.000000 0.369231 0.000000 0.000000 0.000000 1.000000 0.133333 0.000000 0.794872 0.071795 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARYRYTG MEME-1 regular expression -------------------------------------------------------------------------------- CA[GA][CT][GA][CT]TG -------------------------------------------------------------------------------- Time 7.34 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCTGTT MEME-2 width = 8 sites = 51 llr = 460 E-value = 5.1e-024 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :a::::2: pos.-specific C a::a1:12 probability G ::a::a11 matrix T ::::9:67 bits 2.4 ** * 2.2 * ** * 1.9 * ** * 1.7 * ** * Relative 1.5 **** * Entropy 1.2 ****** (13.0 bits) 1.0 ****** 0.7 ****** * 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel CAGCTGTT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:15542584-15542704 100 1.21e-05 TGCATTGGAT CAGCTGTT TGCGTGGCTC chr2R:10437887-10438007 76 1.21e-05 ACGCCGCCAA CAGCTGTT CGAACGCCTC chr2R:12198843-12198963 27 1.21e-05 TCAGTGTTAC CAGCTGTT GTGCTGAACA chr2R:9098466-9098586 21 1.21e-05 ATTTAATTAA CAGCTGTT GCACCTTATG chr2L:8437317-8437437 93 1.21e-05 ACTGTTCAGC CAGCTGTT TACTCTTTAC chr2L:8438198-8438318 88 1.21e-05 GCACTGGAAA CAGCTGTT TAAAAAAGCG chr2R:7510175-7510295 11 1.21e-05 AAAACACGAA CAGCTGTT GGCCAGTGCT chr3R:30423858-30423978 71 1.21e-05 CACTGCCGAA CAGCTGTT CACAGCTACA chr2R:9251950-9252070 73 1.21e-05 CCCTTCGCAA CAGCTGTT GTGAATCTGG chr2L:1732287-1732407 62 1.21e-05 CGTTCAAGCT CAGCTGTT CTCGCCTAAC chr3R:10045510-10045630 11 1.21e-05 GTTTTCGAAT CAGCTGTT CGTTATGCTA chrX:17423455-17423575 72 1.21e-05 GCACTGCTGT CAGCTGTT TTTAAGTAAA chr3L:4193867-4193987 105 1.21e-05 AAGAAGCAAT CAGCTGTT GCCGTTTT chr2L:11120289-11120409 17 1.21e-05 TGACAGGCAC CAGCTGTT TGTCTTATGC chr2R:20278903-20279023 34 1.21e-05 CTGTTAAGCT CAGCTGTT CGGTATTGAA chrX:15572091-15572211 28 1.21e-05 TTATTTCAAT CAGCTGTT TACCAGTGTT chr3R:13699494-13699614 47 1.21e-05 TGTCAGCAGT CAGCTGTT CGTCGCTCGC chr2L:15764145-15764265 104 1.21e-05 TCGGTTCCTG CAGCTGTT TTCAAGCGA chr2L:155238-155358 75 1.92e-05 CCAACACTAT CAGCTGTC GAATCTCGAA chr2R:22066791-22066911 5 1.92e-05 GCAG CAGCTGTC GTTTAAAAAT chr2L:19530283-19530403 5 1.92e-05 GAAA CAGCTGTC TATTACAGTG chr3R:11796945-11797065 45 3.10e-05 CTTTCTGCAT CAGCTGAT TGAATGTGTC chr2R:16291440-16291560 24 3.10e-05 CACAACGCCG CAGCTGAT TGTGTTTTTG chr2L:5907018-5907138 84 3.10e-05 AAAATGTGAA CAGCTGAT ACCACTGGCA chrX:18565996-18566116 76 3.10e-05 CACTGTGCCA CAGCTGAT AATTGCCGTT chr2L:18677098-18677218 67 3.10e-05 AACAAATAAA CAGCTGAT TAGGCAGTGG chr3R:7902643-7902763 79 3.10e-05 CACAAGCTTT CAGCTGAT TTTTGGCGCC chr3R:25335196-25335316 72 3.10e-05 CATTGTGAAA CAGCTGAT TGCATAAACA chr2R:24571746-24571866 80 3.82e-05 TCATTTGAAT CAGCTGCT TTTGACCGTT chr3R:25493428-25493548 2 4.53e-05 T CAGCTGTG CGTAGGTGTG chr2L:21166580-21166700 52 5.24e-05 ATGACATGAA CAGCTGGT GGCGGTGTTG chr3R:14513592-14513712 32 5.94e-05 GGGTTATAAA CAGCTGAC TGCTGGGCTC chr3R:5611861-5611981 40 5.94e-05 GTAACTTTAT CAGCTGAC CTAACAGACG chr2L:811505-811625 83 5.94e-05 TGCGTGTGCA CAGCTGAC TTGCCGGCAA chr2R:18710839-18710959 81 5.94e-05 CCTCATTTAA CAGCTGAC TACCAATATT chr3L:10686771-10686891 7 6.37e-05 TAAATC CAGCTGCC TAACACTATG chrX:11137043-11137163 50 7.51e-05 TGCTGGCAAT CAGCCGTT GTGTTTGAAA chr3R:8726738-8726858 30 7.51e-05 TAATTAGTAG CAGCCGTT ACGATTTAGT chrX:11483370-11483490 45 7.51e-05 AACACTGTAC CAGCTGGC AATGTAAATT chr2R:13205323-13205443 15 7.51e-05 GAAATGAAAT CAGCTGGC TGTTGTGTTT chr2R:13239434-13239554 17 8.21e-05 TGTGGCCGAT CAGCTGAG TCTAACAGTC chrX:19704125-19704245 3 8.63e-05 GC CAGCTGCG CACCTAAAGT chr3R:10571637-10571757 53 8.63e-05 ATCTCGCATC CAGCTGCG TTTGTTGATC chrX:8152825-8152945 81 9.48e-05 ACACTACCAT CAGCTGGG GAAAACCACC chr3L:9614078-9614198 69 1.14e-04 AGCAGTATGC CAGCAGTT CGAAAAGTGT chr3L:8121720-8121840 3 1.14e-04 TT CAGCAGTT TAAATATTGG chr3R:18385742-18385862 50 1.38e-04 ATCGACCTAT CTGCTGTT TTCCAACACT chr2L:2357479-2357599 113 1.38e-04 AGCTAACAGA CTGCTGTT chr2L:1504432-1504552 12 1.38e-04 TGCTTTTGCT GAGCTGTT ACACAACAGT chr3R:29503864-29503984 85 1.38e-04 GGTGTTAACA GAGCTGTT AACTGATATG chr2L:8198853-8198973 44 1.42e-04 AGTCAACCGA CAGCCGCT TGACAGCACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:15542584-15542704 1.2e-05 99_[+2]_13 chr2R:10437887-10438007 1.2e-05 75_[+2]_37 chr2R:12198843-12198963 1.2e-05 26_[+2]_86 chr2R:9098466-9098586 1.2e-05 20_[+2]_92 chr2L:8437317-8437437 1.2e-05 92_[+2]_20 chr2L:8438198-8438318 1.2e-05 87_[+2]_25 chr2R:7510175-7510295 1.2e-05 10_[+2]_102 chr3R:30423858-30423978 1.2e-05 70_[+2]_42 chr2R:9251950-9252070 1.2e-05 72_[+2]_40 chr2L:1732287-1732407 1.2e-05 61_[+2]_51 chr3R:10045510-10045630 1.2e-05 10_[+2]_102 chrX:17423455-17423575 1.2e-05 71_[+2]_41 chr3L:4193867-4193987 1.2e-05 104_[+2]_8 chr2L:11120289-11120409 1.2e-05 16_[+2]_96 chr2R:20278903-20279023 1.2e-05 33_[+2]_79 chrX:15572091-15572211 1.2e-05 27_[+2]_85 chr3R:13699494-13699614 1.2e-05 46_[+2]_66 chr2L:15764145-15764265 1.2e-05 103_[+2]_9 chr2L:155238-155358 1.9e-05 74_[+2]_38 chr2R:22066791-22066911 1.9e-05 4_[+2]_108 chr2L:19530283-19530403 1.9e-05 4_[+2]_108 chr3R:11796945-11797065 3.1e-05 44_[+2]_68 chr2R:16291440-16291560 3.1e-05 23_[+2]_89 chr2L:5907018-5907138 3.1e-05 83_[+2]_29 chrX:18565996-18566116 3.1e-05 75_[+2]_37 chr2L:18677098-18677218 3.1e-05 66_[+2]_46 chr3R:7902643-7902763 3.1e-05 78_[+2]_34 chr3R:25335196-25335316 3.1e-05 71_[+2]_41 chr2R:24571746-24571866 3.8e-05 79_[+2]_33 chr3R:25493428-25493548 4.5e-05 1_[+2]_111 chr2L:21166580-21166700 5.2e-05 51_[+2]_61 chr3R:14513592-14513712 5.9e-05 31_[+2]_81 chr3R:5611861-5611981 5.9e-05 39_[+2]_73 chr2L:811505-811625 5.9e-05 82_[+2]_30 chr2R:18710839-18710959 5.9e-05 80_[+2]_32 chr3L:10686771-10686891 6.4e-05 6_[+2]_106 chrX:11137043-11137163 7.5e-05 49_[+2]_63 chr3R:8726738-8726858 7.5e-05 29_[+2]_83 chrX:11483370-11483490 7.5e-05 44_[+2]_68 chr2R:13205323-13205443 7.5e-05 14_[+2]_98 chr2R:13239434-13239554 8.2e-05 16_[+2]_96 chrX:19704125-19704245 8.6e-05 2_[+2]_110 chr3R:10571637-10571757 8.6e-05 52_[+2]_60 chrX:8152825-8152945 9.5e-05 80_[+2]_32 chr3L:9614078-9614198 0.00011 68_[+2]_44 chr3L:8121720-8121840 0.00011 2_[+2]_110 chr3R:18385742-18385862 0.00014 49_[+2]_63 chr2L:2357479-2357599 0.00014 112_[+2] chr2L:1504432-1504552 0.00014 11_[+2]_101 chr3R:29503864-29503984 0.00014 84_[+2]_28 chr2L:8198853-8198973 0.00014 43_[+2]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCTGTT width=8 seqs=51 chr2R:15542584-15542704 ( 100) CAGCTGTT 1 chr2R:10437887-10438007 ( 76) CAGCTGTT 1 chr2R:12198843-12198963 ( 27) CAGCTGTT 1 chr2R:9098466-9098586 ( 21) CAGCTGTT 1 chr2L:8437317-8437437 ( 93) CAGCTGTT 1 chr2L:8438198-8438318 ( 88) CAGCTGTT 1 chr2R:7510175-7510295 ( 11) CAGCTGTT 1 chr3R:30423858-30423978 ( 71) CAGCTGTT 1 chr2R:9251950-9252070 ( 73) CAGCTGTT 1 chr2L:1732287-1732407 ( 62) CAGCTGTT 1 chr3R:10045510-10045630 ( 11) CAGCTGTT 1 chrX:17423455-17423575 ( 72) CAGCTGTT 1 chr3L:4193867-4193987 ( 105) CAGCTGTT 1 chr2L:11120289-11120409 ( 17) CAGCTGTT 1 chr2R:20278903-20279023 ( 34) CAGCTGTT 1 chrX:15572091-15572211 ( 28) CAGCTGTT 1 chr3R:13699494-13699614 ( 47) CAGCTGTT 1 chr2L:15764145-15764265 ( 104) CAGCTGTT 1 chr2L:155238-155358 ( 75) CAGCTGTC 1 chr2R:22066791-22066911 ( 5) CAGCTGTC 1 chr2L:19530283-19530403 ( 5) CAGCTGTC 1 chr3R:11796945-11797065 ( 45) CAGCTGAT 1 chr2R:16291440-16291560 ( 24) CAGCTGAT 1 chr2L:5907018-5907138 ( 84) CAGCTGAT 1 chrX:18565996-18566116 ( 76) CAGCTGAT 1 chr2L:18677098-18677218 ( 67) CAGCTGAT 1 chr3R:7902643-7902763 ( 79) CAGCTGAT 1 chr3R:25335196-25335316 ( 72) CAGCTGAT 1 chr2R:24571746-24571866 ( 80) CAGCTGCT 1 chr3R:25493428-25493548 ( 2) CAGCTGTG 1 chr2L:21166580-21166700 ( 52) CAGCTGGT 1 chr3R:14513592-14513712 ( 32) CAGCTGAC 1 chr3R:5611861-5611981 ( 40) CAGCTGAC 1 chr2L:811505-811625 ( 83) CAGCTGAC 1 chr2R:18710839-18710959 ( 81) CAGCTGAC 1 chr3L:10686771-10686891 ( 7) CAGCTGCC 1 chrX:11137043-11137163 ( 50) CAGCCGTT 1 chr3R:8726738-8726858 ( 30) CAGCCGTT 1 chrX:11483370-11483490 ( 45) CAGCTGGC 1 chr2R:13205323-13205443 ( 15) CAGCTGGC 1 chr2R:13239434-13239554 ( 17) CAGCTGAG 1 chrX:19704125-19704245 ( 3) CAGCTGCG 1 chr3R:10571637-10571757 ( 53) CAGCTGCG 1 chrX:8152825-8152945 ( 81) CAGCTGGG 1 chr3L:9614078-9614198 ( 69) CAGCAGTT 1 chr3L:8121720-8121840 ( 3) CAGCAGTT 1 chr3R:18385742-18385862 ( 50) CTGCTGTT 1 chr2L:2357479-2357599 ( 113) CTGCTGTT 1 chr2L:1504432-1504552 ( 12) GAGCTGTT 1 chr3R:29503864-29503984 ( 85) GAGCTGTT 1 chr2L:8198853-8198973 ( 44) CAGCCGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.2612 E= 5.1e-024 -1232 235 -225 -1232 164 -1232 -1232 -301 -1232 -1232 242 -1232 -1232 241 -1232 -1232 -298 -168 -1232 151 -1232 -1232 242 -1232 -39 -94 -125 90 -1232 6 -93 116 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 51 E= 5.1e-024 0.000000 0.960784 0.039216 0.000000 0.960784 0.000000 0.000000 0.039216 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.039216 0.058824 0.000000 0.901961 0.000000 0.000000 1.000000 0.000000 0.235294 0.098039 0.078431 0.588235 0.000000 0.196078 0.098039 0.705882 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCTGTT MEME-2 regular expression -------------------------------------------------------------------------------- CAGCTG[TA]T -------------------------------------------------------------------------------- Time 13.22 secs. ******************************************************************************** ******************************************************************************** MOTIF TATCGATA MEME-3 width = 8 sites = 49 llr = 445 E-value = 4.8e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1a:::a:8 pos.-specific C :::a:::: probability G ::::a::1 matrix T 9:a:::a1 bits 2.4 ** 2.2 ** 1.9 ** 1.7 **** Relative 1.5 ****** Entropy 1.2 ******* (13.1 bits) 1.0 ******* 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TATCGATA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3L:8296996-8297116 2 3.27e-05 A TATCGATA TATGAGCTTC chr2R:18660625-18660745 41 3.27e-05 ACAGCTTACT TATCGATA AAAGTATTTC chr3L:20816043-20816163 58 3.27e-05 AAGTGAAACC TATCGATA TGAACGTGAC chrX:10385856-10385976 45 3.27e-05 CCCATCGGAC TATCGATA AAGTCGAACT chr3R:11796945-11797065 87 3.27e-05 GCTTTGAATG TATCGATA GTTTCGGACT chr3L:12116008-12116128 24 3.27e-05 AATGTTAAAT TATCGATA AGCCAAACCA chrX:1476962-1477082 75 3.27e-05 CGCGCAGAGC TATCGATA AGTATCGCGA chrX:15992268-15992388 62 3.27e-05 TTTTAAATAG TATCGATA CCCAACTCGC chrX:617583-617703 18 3.27e-05 CGACGGGGCC TATCGATA TACCCGATAA chrX:6279476-6279596 92 3.27e-05 AGAGCGGAGT TATCGATA AGTTGCCTGA chr2L:16356890-16357010 35 3.27e-05 TTATTGCCAC TATCGATA TATTTCGGTA chrX:20159982-20160102 53 3.27e-05 TATCAATATG TATCGATA TATTTAGAGA chr2L:1177598-1177718 85 3.27e-05 ATCGGTCAGT TATCGATA ACTGGCAGTC chr2R:12431068-12431188 102 3.27e-05 CGGTCTAAAT TATCGATA GTCTTAGGCC chr3L:324685-324805 26 3.27e-05 TATTCCACAC TATCGATA ACTCCATAAA chr3L:5662207-5662327 24 3.27e-05 CTTCGGACGA TATCGATA GATGCCTTGT chr2R:22492139-22492259 19 3.27e-05 ACAGCCACCC TATCGATA TATCGACTAT chr2R:9836859-9836979 46 3.27e-05 TGCAACTACC TATCGATA AGTCTATGGC chrX:8407256-8407376 67 3.27e-05 TGGGATACGT TATCGATA ACGTTACATT chr2R:7712023-7712143 46 3.27e-05 AGCAATTATT TATCGATA AGACGGCAAA chr3R:10045510-10045630 27 3.27e-05 TTCGTTATGC TATCGATA AGTTATTGGG chr3L:8121720-8121840 38 3.27e-05 TAAGTAGAGT TATCGATA AGAGCGTCCA chr3R:29116284-29116404 108 3.27e-05 GGTGTCCTCA TATCGATA GCGAT chr2L:11120289-11120409 35 3.27e-05 TGTCTTATGC TATCGATA GCGCCGACTT chr3L:833987-834107 31 3.27e-05 GTTTGTTGAC TATCGATA TACCAACTTC chrX:9605946-9606066 37 3.27e-05 CTATCGCGCT TATCGATA AGTGGCGCGG chr3L:16390907-16391027 81 3.27e-05 TGGCTTGGTC TATCGATA AATGGCGCCA chr2R:18710839-18710959 101 3.27e-05 CCAATATTGT TATCGATA TCCAATACCG chr2R:7512739-7512859 19 3.27e-05 CATTTATCGG TATCGATA AGCACCGGAT chr3R:15367632-15367752 87 3.27e-05 GCATATTATT TATCGATA ACTTGGGCGC chr2R:7516336-7516456 60 3.27e-05 AATAATTATG TATCGATA GACTATTCGA chr2R:8891647-8891767 40 5.25e-05 AATTTATTTA TATCGATG ATATATTTTG chr2R:7653951-7654071 62 5.25e-05 CACTGGGAAC TATCGATG TGTAGCCACT chr3R:30423858-30423978 20 5.25e-05 CTAATCGATT TATCGATG GTTGCACGCA chr2L:1166413-1166533 99 5.25e-05 GCGTTATCGT TATCGATG ACCAAATAAT chr2R:12037207-12037327 104 8.60e-05 ATCGAATACA TATCGATT GCACCTCCA chr2R:18705872-18705992 32 8.60e-05 CCTACTTCGA TATCGATT ACCGACAGTT chrX:5754972-5755092 51 8.60e-05 TATCGAATAC TATCGATT TACCGCCAAG chr3R:15363786-15363906 105 8.60e-05 TTCATTAGCT TATCGATT AATTATTG chr3L:20393530-20393650 23 8.60e-05 ACAAATGGTA TATCGATT ATTTCACTCT chrX:10219963-10220083 84 8.60e-05 ACACTTGCAA TATCGATT GTCGATAGGC chrX:17842045-17842165 90 1.05e-04 TAGACGTCTG CATCGATA GTATCGCATA chr3R:15839450-15839570 74 1.05e-04 CCGGGGAGTT CATCGATA AATATGTAGT chr3L:11728241-11728361 42 1.37e-04 GCCAAAAATC AATCGATA TCCATTGATC chrX:19664015-19664135 21 1.37e-04 GGCGGCAAGA AATCGATA TAACTAGTTG chrX:11359094-11359214 82 1.37e-04 TAAGCCCGAA AATCGATA GCAACGAACG chr2R:13509533-13509653 30 1.69e-04 AATAGAGTGG TATCGAAA TGGAGCCGAT chr3R:29835439-29835559 78 1.69e-04 GTGCTGTGGT TATCGAAA ACAATAGTAT chrX:2065280-2065400 104 1.89e-04 AGCCGATTAC TGTCGATA ACTCGGCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3L:8296996-8297116 3.3e-05 1_[+3]_111 chr2R:18660625-18660745 3.3e-05 40_[+3]_72 chr3L:20816043-20816163 3.3e-05 57_[+3]_55 chrX:10385856-10385976 3.3e-05 44_[+3]_68 chr3R:11796945-11797065 3.3e-05 86_[+3]_26 chr3L:12116008-12116128 3.3e-05 23_[+3]_89 chrX:1476962-1477082 3.3e-05 74_[+3]_38 chrX:15992268-15992388 3.3e-05 61_[+3]_51 chrX:617583-617703 3.3e-05 17_[+3]_95 chrX:6279476-6279596 3.3e-05 91_[+3]_21 chr2L:16356890-16357010 3.3e-05 34_[+3]_78 chrX:20159982-20160102 3.3e-05 52_[+3]_60 chr2L:1177598-1177718 3.3e-05 84_[+3]_28 chr2R:12431068-12431188 3.3e-05 101_[+3]_11 chr3L:324685-324805 3.3e-05 25_[+3]_87 chr3L:5662207-5662327 3.3e-05 23_[+3]_89 chr2R:22492139-22492259 3.3e-05 18_[+3]_94 chr2R:9836859-9836979 3.3e-05 45_[+3]_67 chrX:8407256-8407376 3.3e-05 66_[+3]_46 chr2R:7712023-7712143 3.3e-05 45_[+3]_67 chr3R:10045510-10045630 3.3e-05 26_[+3]_86 chr3L:8121720-8121840 3.3e-05 37_[+3]_75 chr3R:29116284-29116404 3.3e-05 107_[+3]_5 chr2L:11120289-11120409 3.3e-05 34_[+3]_78 chr3L:833987-834107 3.3e-05 30_[+3]_82 chrX:9605946-9606066 3.3e-05 36_[+3]_76 chr3L:16390907-16391027 3.3e-05 80_[+3]_32 chr2R:18710839-18710959 3.3e-05 100_[+3]_12 chr2R:7512739-7512859 3.3e-05 18_[+3]_94 chr3R:15367632-15367752 3.3e-05 86_[+3]_26 chr2R:7516336-7516456 3.3e-05 59_[+3]_53 chr2R:8891647-8891767 5.3e-05 39_[+3]_73 chr2R:7653951-7654071 5.3e-05 61_[+3]_51 chr3R:30423858-30423978 5.3e-05 19_[+3]_93 chr2L:1166413-1166533 5.3e-05 98_[+3]_14 chr2R:12037207-12037327 8.6e-05 103_[+3]_9 chr2R:18705872-18705992 8.6e-05 31_[+3]_81 chrX:5754972-5755092 8.6e-05 50_[+3]_62 chr3R:15363786-15363906 8.6e-05 104_[+3]_8 chr3L:20393530-20393650 8.6e-05 22_[+3]_90 chrX:10219963-10220083 8.6e-05 83_[+3]_29 chrX:17842045-17842165 0.00011 89_[+3]_23 chr3R:15839450-15839570 0.00011 73_[+3]_39 chr3L:11728241-11728361 0.00014 41_[+3]_71 chrX:19664015-19664135 0.00014 20_[+3]_92 chrX:11359094-11359214 0.00014 81_[+3]_31 chr2R:13509533-13509653 0.00017 29_[+3]_83 chr3R:29835439-29835559 0.00017 77_[+3]_35 chrX:2065280-2065400 0.00019 103_[+3]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TATCGATA width=8 seqs=49 chr3L:8296996-8297116 ( 2) TATCGATA 1 chr2R:18660625-18660745 ( 41) TATCGATA 1 chr3L:20816043-20816163 ( 58) TATCGATA 1 chrX:10385856-10385976 ( 45) TATCGATA 1 chr3R:11796945-11797065 ( 87) TATCGATA 1 chr3L:12116008-12116128 ( 24) TATCGATA 1 chrX:1476962-1477082 ( 75) TATCGATA 1 chrX:15992268-15992388 ( 62) TATCGATA 1 chrX:617583-617703 ( 18) TATCGATA 1 chrX:6279476-6279596 ( 92) TATCGATA 1 chr2L:16356890-16357010 ( 35) TATCGATA 1 chrX:20159982-20160102 ( 53) TATCGATA 1 chr2L:1177598-1177718 ( 85) TATCGATA 1 chr2R:12431068-12431188 ( 102) TATCGATA 1 chr3L:324685-324805 ( 26) TATCGATA 1 chr3L:5662207-5662327 ( 24) TATCGATA 1 chr2R:22492139-22492259 ( 19) TATCGATA 1 chr2R:9836859-9836979 ( 46) TATCGATA 1 chrX:8407256-8407376 ( 67) TATCGATA 1 chr2R:7712023-7712143 ( 46) TATCGATA 1 chr3R:10045510-10045630 ( 27) TATCGATA 1 chr3L:8121720-8121840 ( 38) TATCGATA 1 chr3R:29116284-29116404 ( 108) TATCGATA 1 chr2L:11120289-11120409 ( 35) TATCGATA 1 chr3L:833987-834107 ( 31) TATCGATA 1 chrX:9605946-9606066 ( 37) TATCGATA 1 chr3L:16390907-16391027 ( 81) TATCGATA 1 chr2R:18710839-18710959 ( 101) TATCGATA 1 chr2R:7512739-7512859 ( 19) TATCGATA 1 chr3R:15367632-15367752 ( 87) TATCGATA 1 chr2R:7516336-7516456 ( 60) TATCGATA 1 chr2R:8891647-8891767 ( 40) TATCGATG 1 chr2R:7653951-7654071 ( 62) TATCGATG 1 chr3R:30423858-30423978 ( 20) TATCGATG 1 chr2L:1166413-1166533 ( 99) TATCGATG 1 chr2R:12037207-12037327 ( 104) TATCGATT 1 chr2R:18705872-18705992 ( 32) TATCGATT 1 chrX:5754972-5755092 ( 51) TATCGATT 1 chr3R:15363786-15363906 ( 105) TATCGATT 1 chr3L:20393530-20393650 ( 23) TATCGATT 1 chrX:10219963-10220083 ( 84) TATCGATT 1 chrX:17842045-17842165 ( 90) CATCGATA 1 chr3R:15839450-15839570 ( 74) CATCGATA 1 chr3L:11728241-11728361 ( 42) AATCGATA 1 chrX:19664015-19664135 ( 21) AATCGATA 1 chrX:11359094-11359214 ( 82) AATCGATA 1 chr2R:13509533-13509653 ( 30) TATCGAAA 1 chr3R:29835439-29835559 ( 78) TATCGAAA 1 chrX:2065280-2065400 ( 104) TGTCGATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 9.63848 E= 4.8e-022 -234 -220 -1226 151 166 -1226 -319 -1226 -1226 -1226 -1226 166 -1226 241 -1226 -1226 -1226 -1226 242 -1226 169 -1226 -1226 -1226 -292 -1226 -1226 160 136 -1226 -119 -137 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 49 E= 4.8e-022 0.061224 0.040816 0.000000 0.897959 0.979592 0.000000 0.020408 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.040816 0.000000 0.000000 0.959184 0.795918 0.000000 0.081633 0.122449 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TATCGATA MEME-3 regular expression -------------------------------------------------------------------------------- TATCGATA -------------------------------------------------------------------------------- Time 19.01 secs. ******************************************************************************** ******************************************************************************** MOTIF GSCGCCAA MEME-4 width = 8 sites = 47 llr = 413 E-value = 2.0e-014 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1::::179 pos.-specific C 249:9731 probability G 76:a12:: matrix T ::1::::: bits 2.4 * 2.2 ** 1.9 *** 1.7 *** Relative 1.5 ***** * Entropy 1.2 ****** * (12.7 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGCGCCAA consensus C C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:10838712-10838832 104 4.15e-06 TTCGAAAAAA GGCGCCAA TGGATTATT chr2L:8198853-8198973 20 4.15e-06 TTTGAAATGA GGCGCCAA TTTGTTAGTC chr3R:29835439-29835559 50 4.15e-06 CGATTACTTG GGCGCCAA CAAAACTGGT chr3L:11711407-11711527 101 4.15e-06 GTGAGCATAT GGCGCCAA TTCCAAATAT chr3R:23348014-23348134 26 4.15e-06 TTTTGAAATT GGCGCCAA ACGTGTTACT chr3L:19642794-19642914 93 4.15e-06 GTTCTGAAAT GGCGCCAA TGAATTTATT chr3L:4193867-4193987 29 4.15e-06 ATCAAAATTT GGCGCCAA CATTTTTGGT chr2R:13205323-13205443 33 4.15e-06 TGTTGTGTTT GGCGCCAA ACGGGCGGCA chr3L:16390907-16391027 92 4.15e-06 ATCGATAAAT GGCGCCAA GTTTATTGTT chr2R:10437887-10438007 68 8.32e-06 GCGCACCGAC GCCGCCAA CAGCTGTTCG chr2R:12198843-12198963 113 8.32e-06 AAATGAAACC GCCGCCAA chr3R:25493428-25493548 74 8.32e-06 TTCAAATTAT GCCGCCAA AAAATCTACA chr3R:7902643-7902763 91 1.08e-05 GCTGATTTTT GGCGCCCA TTTAAAAATT chr2R:16344388-16344508 19 1.34e-05 ATTTAATTTT GCCGCCCA ATCTTCAAAC chr3L:9614078-9614198 12 2.17e-05 AATTAAATGA CGCGCCAA GTTCAGTATT chr3L:11728241-11728361 29 2.17e-05 AATGTTTCTG CGCGCCAA AAATCAATCG chr2L:15764145-15764265 4 2.17e-05 GCT CGCGCCAA ACTAAAACTA chr2R:24780810-24780930 26 3.09e-05 TGAATTTCTT GGCGCGCA ATTAGCCAGT chrX:18565996-18566116 50 3.09e-05 CCATCGCAGA GGCGCGCA TTTCACAACA chrX:8152825-8152945 27 3.09e-05 TTTCAAATGT GGCGCCAC AACCAAGGTA chr3R:16482405-16482525 103 3.09e-05 TTAAAAGTTT GGCGCGCA TTTGAATTGT chr2R:22066791-22066911 23 3.51e-05 GTTTAAAAAT CCCGCCAA AAATTAGTGT chr3L:19096190-19096310 72 3.51e-05 TTAGCTTTTT CCCGCCAA TACCTTTAAA chrX:616912-617032 54 3.76e-05 AGTTTGAATG CGCGCCCA AATTTGGGAA chr2L:3173107-3173227 99 4.95e-05 CTTGAATTTG AGCGCCAA GTTGAATGTG chrX:10385856-10385976 71 4.95e-05 CTGTAAAGCC GCCGCCAC CAAAAACTTT chr2R:6807551-6807671 68 4.95e-05 AACACTCGAA GCCGCCAC GGCCACACTG chrX:1868778-1868898 85 4.95e-05 AAAATATATC GCCGCGCA AAATCTTATC chr2R:13239434-13239554 105 4.95e-05 TTGAAAAATG AGCGCCAA ATTTAAAA chr3R:9763662-9763782 51 4.95e-05 ATAATTTAAA GCCGCGCA TTCCCATCGG chrX:10219963-10220083 111 5.36e-05 CGCCGATAGT CCCGCCCA AG chrX:19664015-19664135 11 6.46e-05 TTCGTAAACT GGCGGCAA GAAATCGATA chrX:5754972-5755092 60 6.46e-05 CTATCGATTT ACCGCCAA GCCAGTGCTA chr3R:26056508-26056628 19 8.13e-05 TGCAGATTTT GGCGCAAA TTTTGGGAAT chr2L:8437317-8437437 11 8.13e-05 CGAACGAGGC GGCGCAAA CAGAATTGAG chr2R:16149856-16149976 20 8.54e-05 TACATTACAT GCCGGCAA AAGGAGCATA chr2L:811505-811625 93 8.54e-05 CAGCTGACTT GCCGGCAA ATGAAAAACA chr2R:6652909-6653029 29 1.02e-04 ACGCCGTGGA GGTGCCAA TATTTTGAGT chrX:11359094-11359214 44 1.02e-04 GTTCAAATCA ACCGCCCA GCTCGGACAC chrX:1476962-1477082 63 1.18e-04 TTGAAGTTTG CGCGCGCA GAGCTATCGA chrX:617583-617703 97 1.45e-04 ACACTGGTTG AGCGCGAA GAACTGGTAT chr4:869478-869598 62 1.45e-04 CGTTGTAAGT GCTGCCAA ATACGTGAAA chrX:19170947-19171067 63 1.45e-04 AGCCCAAAAG GCTGCCAA ACTCCATTGC chr2R:18705872-18705992 18 1.45e-04 TTCAAAATTT GGCGCCTA CTTCGATATC chrX:9605946-9606066 63 1.45e-04 GGTGCTGGTA AGCGCGAA AATATATTCT chr3R:22446610-22446730 5 1.62e-04 AACA GCCGCACA CACGTGCTGG chr3R:11412539-11412659 87 1.91e-04 ATGTGATAGC GCCGCGCC GGCTTCTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:10838712-10838832 4.1e-06 103_[+4]_9 chr2L:8198853-8198973 4.1e-06 19_[+4]_93 chr3R:29835439-29835559 4.1e-06 49_[+4]_63 chr3L:11711407-11711527 4.1e-06 100_[+4]_12 chr3R:23348014-23348134 4.1e-06 25_[+4]_87 chr3L:19642794-19642914 4.1e-06 92_[+4]_20 chr3L:4193867-4193987 4.1e-06 28_[+4]_84 chr2R:13205323-13205443 4.1e-06 32_[+4]_80 chr3L:16390907-16391027 4.1e-06 91_[+4]_21 chr2R:10437887-10438007 8.3e-06 67_[+4]_45 chr2R:12198843-12198963 8.3e-06 112_[+4] chr3R:25493428-25493548 8.3e-06 73_[+4]_39 chr3R:7902643-7902763 1.1e-05 90_[+4]_22 chr2R:16344388-16344508 1.3e-05 18_[+4]_94 chr3L:9614078-9614198 2.2e-05 11_[+4]_101 chr3L:11728241-11728361 2.2e-05 28_[+4]_84 chr2L:15764145-15764265 2.2e-05 3_[+4]_109 chr2R:24780810-24780930 3.1e-05 25_[+4]_87 chrX:18565996-18566116 3.1e-05 49_[+4]_63 chrX:8152825-8152945 3.1e-05 26_[+4]_86 chr3R:16482405-16482525 3.1e-05 102_[+4]_10 chr2R:22066791-22066911 3.5e-05 22_[+4]_90 chr3L:19096190-19096310 3.5e-05 71_[+4]_41 chrX:616912-617032 3.8e-05 53_[+4]_59 chr2L:3173107-3173227 5e-05 98_[+4]_14 chrX:10385856-10385976 5e-05 70_[+4]_42 chr2R:6807551-6807671 5e-05 67_[+4]_45 chrX:1868778-1868898 5e-05 84_[+4]_28 chr2R:13239434-13239554 5e-05 104_[+4]_8 chr3R:9763662-9763782 5e-05 50_[+4]_62 chrX:10219963-10220083 5.4e-05 110_[+4]_2 chrX:19664015-19664135 6.5e-05 10_[+4]_102 chrX:5754972-5755092 6.5e-05 59_[+4]_53 chr3R:26056508-26056628 8.1e-05 18_[+4]_94 chr2L:8437317-8437437 8.1e-05 10_[+4]_102 chr2R:16149856-16149976 8.5e-05 19_[+4]_93 chr2L:811505-811625 8.5e-05 92_[+4]_20 chr2R:6652909-6653029 0.0001 28_[+4]_84 chrX:11359094-11359214 0.0001 43_[+4]_69 chrX:1476962-1477082 0.00012 62_[+4]_50 chrX:617583-617703 0.00014 96_[+4]_16 chr4:869478-869598 0.00014 61_[+4]_51 chrX:19170947-19171067 0.00014 62_[+4]_50 chr2R:18705872-18705992 0.00014 17_[+4]_95 chrX:9605946-9606066 0.00014 62_[+4]_50 chr3R:22446610-22446730 0.00016 4_[+4]_108 chr3R:11412539-11412659 0.00019 86_[+4]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSCGCCAA width=8 seqs=47 chr2R:10838712-10838832 ( 104) GGCGCCAA 1 chr2L:8198853-8198973 ( 20) GGCGCCAA 1 chr3R:29835439-29835559 ( 50) GGCGCCAA 1 chr3L:11711407-11711527 ( 101) GGCGCCAA 1 chr3R:23348014-23348134 ( 26) GGCGCCAA 1 chr3L:19642794-19642914 ( 93) GGCGCCAA 1 chr3L:4193867-4193987 ( 29) GGCGCCAA 1 chr2R:13205323-13205443 ( 33) GGCGCCAA 1 chr3L:16390907-16391027 ( 92) GGCGCCAA 1 chr2R:10437887-10438007 ( 68) GCCGCCAA 1 chr2R:12198843-12198963 ( 113) GCCGCCAA 1 chr3R:25493428-25493548 ( 74) GCCGCCAA 1 chr3R:7902643-7902763 ( 91) GGCGCCCA 1 chr2R:16344388-16344508 ( 19) GCCGCCCA 1 chr3L:9614078-9614198 ( 12) CGCGCCAA 1 chr3L:11728241-11728361 ( 29) CGCGCCAA 1 chr2L:15764145-15764265 ( 4) CGCGCCAA 1 chr2R:24780810-24780930 ( 26) GGCGCGCA 1 chrX:18565996-18566116 ( 50) GGCGCGCA 1 chrX:8152825-8152945 ( 27) GGCGCCAC 1 chr3R:16482405-16482525 ( 103) GGCGCGCA 1 chr2R:22066791-22066911 ( 23) CCCGCCAA 1 chr3L:19096190-19096310 ( 72) CCCGCCAA 1 chrX:616912-617032 ( 54) CGCGCCCA 1 chr2L:3173107-3173227 ( 99) AGCGCCAA 1 chrX:10385856-10385976 ( 71) GCCGCCAC 1 chr2R:6807551-6807671 ( 68) GCCGCCAC 1 chrX:1868778-1868898 ( 85) GCCGCGCA 1 chr2R:13239434-13239554 ( 105) AGCGCCAA 1 chr3R:9763662-9763782 ( 51) GCCGCGCA 1 chrX:10219963-10220083 ( 111) CCCGCCCA 1 chrX:19664015-19664135 ( 11) GGCGGCAA 1 chrX:5754972-5755092 ( 60) ACCGCCAA 1 chr3R:26056508-26056628 ( 19) GGCGCAAA 1 chr2L:8437317-8437437 ( 11) GGCGCAAA 1 chr2R:16149856-16149976 ( 20) GCCGGCAA 1 chr2L:811505-811625 ( 93) GCCGGCAA 1 chr2R:6652909-6653029 ( 29) GGTGCCAA 1 chrX:11359094-11359214 ( 44) ACCGCCCA 1 chrX:1476962-1477082 ( 63) CGCGCGCA 1 chrX:617583-617703 ( 97) AGCGCGAA 1 chr4:869478-869598 ( 62) GCTGCCAA 1 chrX:19170947-19171067 ( 63) GCTGCCAA 1 chr2R:18705872-18705992 ( 18) GGCGCCTA 1 chrX:9605946-9606066 ( 63) AGCGCGAA 1 chr3R:22446610-22446730 ( 5) GCCGCACA 1 chr3R:11412539-11412659 ( 87) GCCGCGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 10.8033 E= 2.0e-014 -128 -14 191 -1220 -1220 110 167 -1220 -1220 232 -1220 -231 -1220 -1220 242 -1220 -1220 232 -155 -1220 -228 199 3 -1220 118 56 -1220 -389 156 -114 -1220 -1220 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 47 E= 2.0e-014 0.127660 0.170213 0.702128 0.000000 0.000000 0.404255 0.595745 0.000000 0.000000 0.936170 0.000000 0.063830 0.000000 0.000000 1.000000 0.000000 0.000000 0.936170 0.063830 0.000000 0.063830 0.744681 0.191489 0.000000 0.702128 0.276596 0.000000 0.021277 0.914894 0.085106 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCGCCAA MEME-4 regular expression -------------------------------------------------------------------------------- G[GC]CGCC[AC]A -------------------------------------------------------------------------------- Time 24.71 secs. ******************************************************************************** ******************************************************************************** MOTIF GGTCACAC MEME-5 width = 8 sites = 14 llr = 155 E-value = 1.5e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::a:a: pos.-specific C ::1a:9:a probability G aa:::::: matrix T ::9::1:: bits 2.4 ** * * 2.2 ** * * 1.9 ** * * 1.7 ** ***** Relative 1.5 ** ***** Entropy 1.2 ******** (15.9 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGTCACAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2R:9103152-9103272 91 7.01e-06 GTGTTGCGGT GGTCACAC TGCGTCGGGG chr2L:2220652-2220772 94 7.01e-06 AACTGATAAC GGTCACAC CGCTTCGCAC chr3L:3811149-3811269 112 7.01e-06 GACTCCCTCT GGTCACAC T chr2R:10838712-10838832 35 7.01e-06 ACTGCCTTGC GGTCACAC TGTTTTTTTC chr2R:19292431-19292551 113 7.01e-06 CACCTTTTAT GGTCACAC chr2L:7782806-7782926 76 7.01e-06 CAAAAGGAAC GGTCACAC TGCTCATGGC chrX:8407256-8407376 85 7.01e-06 ACGTTACATT GGTCACAC ATGTTATTGT chr2L:13793448-13793568 96 7.01e-06 TCGCTTACAC GGTCACAC TTCTGATGAC chr3R:25335196-25335316 92 7.01e-06 CATAAACATC GGTCACAC TCAAAAGGGC chr3L:8191175-8191295 112 7.01e-06 AAGATACCTC GGTCACAC T chr3L:9972644-9972764 98 1.12e-05 GTTGAATAAC GGCCACAC CCAGAGGACA chr2L:16732464-16732584 94 1.12e-05 GTTATAACTT GGCCACAC TGTTCCCTTG chrX:10385856-10385976 107 2.30e-05 TCCGGCAAAC GGTCATAC TCAGCT chrX:16651197-16651317 95 2.30e-05 ATATCGTTAC GGTCATAC TACGGTTACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2R:9103152-9103272 7e-06 90_[+5]_22 chr2L:2220652-2220772 7e-06 93_[+5]_19 chr3L:3811149-3811269 7e-06 111_[+5]_1 chr2R:10838712-10838832 7e-06 34_[+5]_78 chr2R:19292431-19292551 7e-06 112_[+5] chr2L:7782806-7782926 7e-06 75_[+5]_37 chrX:8407256-8407376 7e-06 84_[+5]_28 chr2L:13793448-13793568 7e-06 95_[+5]_17 chr3R:25335196-25335316 7e-06 91_[+5]_21 chr3L:8191175-8191295 7e-06 111_[+5]_1 chr3L:9972644-9972764 1.1e-05 97_[+5]_15 chr2L:16732464-16732584 1.1e-05 93_[+5]_19 chrX:10385856-10385976 2.3e-05 106_[+5]_6 chrX:16651197-16651317 2.3e-05 94_[+5]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTCACAC width=8 seqs=14 chr2R:9103152-9103272 ( 91) GGTCACAC 1 chr2L:2220652-2220772 ( 94) GGTCACAC 1 chr3L:3811149-3811269 ( 112) GGTCACAC 1 chr2R:10838712-10838832 ( 35) GGTCACAC 1 chr2R:19292431-19292551 ( 113) GGTCACAC 1 chr2L:7782806-7782926 ( 76) GGTCACAC 1 chrX:8407256-8407376 ( 85) GGTCACAC 1 chr2L:13793448-13793568 ( 96) GGTCACAC 1 chr3R:25335196-25335316 ( 92) GGTCACAC 1 chr3L:8191175-8191295 ( 112) GGTCACAC 1 chr3L:9972644-9972764 ( 98) GGCCACAC 1 chr2L:16732464-16732584 ( 94) GGCCACAC 1 chrX:10385856-10385976 ( 107) GGTCATAC 1 chrX:16651197-16651317 ( 95) GGTCATAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 28250 bayes= 11.5839 E= 1.5e-003 -1045 -1045 242 -1045 -1045 -1045 242 -1045 -1045 -40 -1045 144 -1045 241 -1045 -1045 169 -1045 -1045 -1045 -1045 219 -1045 -114 169 -1045 -1045 -1045 -1045 241 -1045 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 14 E= 1.5e-003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.142857 0.000000 0.857143 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.857143 0.000000 0.142857 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTCACAC MEME-5 regular expression -------------------------------------------------------------------------------- GGTCACAC -------------------------------------------------------------------------------- Time 30.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2L:13182604-13182724 1.09e-03 49_[+1(5.59e-05)]_63 chr2L:10311123-10311243 3.62e-02 39_[+1(1.84e-05)]_21_[+1(1.84e-05)]_\ 44 chr2R:7516336-7516456 1.28e-01 59_[+3(3.27e-05)]_53 chr3R:15367632-15367752 3.15e-02 86_[+3(3.27e-05)]_26 chr3R:29503864-29503984 4.49e-02 104_[+1(9.14e-05)]_8 chr2L:15764145-15764265 1.07e-05 3_[+4(2.17e-05)]_57_[+1(5.59e-05)]_\ 27_[+2(1.21e-05)]_9 chr2R:12182571-12182691 2.33e-02 19_[+1(4.24e-06)]_16_[+1(1.84e-05)]_\ 69 chr3R:13699494-13699614 1.50e-02 46_[+2(1.21e-05)]_66 chr3R:25594255-25594375 3.18e-01 120 chr3L:8191175-8191295 1.80e-03 51_[+1(5.59e-05)]_52_[+5(7.01e-06)]_\ 1 chr2L:19530283-19530403 4.90e-03 4_[+2(1.92e-05)]_5_[+1(9.14e-05)]_\ 95 chr2R:7512739-7512859 3.33e-03 18_[+3(3.27e-05)]_13_[+1(9.14e-05)]_\ 73 chr3R:9763662-9763782 1.46e-02 50_[+4(4.95e-05)]_36_[+1(9.14e-05)]_\ 18 chr3R:15839450-15839570 4.61e-03 120 chrX:4636190-4636310 8.36e-02 95_[+1(9.14e-05)]_17 chr3L:11630819-11630939 8.89e-01 120 chr2R:18710839-18710959 1.18e-03 29_[+3(3.27e-05)]_43_[+2(5.94e-05)]_\ 12_[+3(3.27e-05)]_12 chrX:10219963-10220083 3.00e-03 83_[+3(8.60e-05)]_19_[+4(5.36e-05)]_\ 2 chr3L:16390907-16391027 2.06e-04 80_[+3(3.27e-05)]_3_[+4(4.15e-06)]_\ 21 chr2R:13205323-13205443 5.37e-05 14_[+2(7.51e-05)]_10_[+4(4.15e-06)]_\ 8_[+1(9.14e-05)]_64 chrX:15572091-15572211 2.86e-04 27_[+2(1.21e-05)]_3_[+1(9.14e-05)]_\ 74 chrX:19762335-19762455 4.42e-02 120 chrX:9605946-9606066 5.14e-04 36_[+3(3.27e-05)]_76 chr2R:17048770-17048890 4.46e-02 120 chr3L:833987-834107 1.67e-02 30_[+3(3.27e-05)]_45_[+1(9.14e-05)]_\ 29 chr2L:1504432-1504552 2.88e-03 31_[+1(1.84e-05)]_81 chr2R:20278903-20279023 3.01e-02 33_[+2(1.21e-05)]_79 chr3L:7339034-7339154 7.82e-01 120 chr2L:11120289-11120409 7.35e-05 16_[+2(1.21e-05)]_10_[+3(3.27e-05)]_\ 78 chr2L:1728650-1728770 1.41e-01 85_[+1(9.14e-05)]_27 chr3R:8723105-8723225 2.28e-02 49_[+1(1.13e-05)]_63 chr2L:15272421-15272541 2.72e-01 49_[+1(9.14e-05)]_63 chr2L:18682055-18682175 5.85e-01 120 chr2R:21720333-21720453 8.60e-02 120 chr3L:20393530-20393650 5.88e-03 22_[+3(8.60e-05)]_90 chr2L:811505-811625 1.46e-03 82_[+2(5.94e-05)]_2_[+4(8.54e-05)]_\ 20 chr3R:25335196-25335316 3.30e-04 27_[+2(8.21e-05)]_36_[+2(3.10e-05)]_\ 12_[+5(7.01e-06)]_21 chr3R:22446610-22446730 4.77e-04 73_[+1(9.14e-05)]_39 chr3R:16482405-16482525 3.63e-03 49_[+1(9.14e-05)]_45_[+4(3.09e-05)]_\ 10 chr3L:19096190-19096310 1.99e-03 21_[+1(1.84e-05)]_42_[+4(3.51e-05)]_\ 41 chrX:616912-617032 8.83e-03 53_[+4(3.76e-05)]_59 chrX:8177115-8177235 1.75e-01 120 chr3L:4193867-4193987 5.78e-06 28_[+4(4.15e-06)]_25_[+1(5.59e-05)]_\ 35_[+2(1.21e-05)]_8 chr3R:15363786-15363906 3.55e-02 104_[+3(8.60e-05)]_8 chrX:11359094-11359214 1.60e-03 120 chr4:721931-722051 2.55e-01 120 chrX:5754972-5755092 6.75e-04 50_[+3(8.60e-05)]_1_[+4(6.46e-05)]_\ 53 chr3R:29116284-29116404 9.08e-04 47_[+1(5.59e-05)]_52_[+3(3.27e-05)]_\ 5 chr3R:7902643-7902763 6.00e-04 78_[+2(3.10e-05)]_4_[+4(1.08e-05)]_\ 22 chr2R:24188198-24188318 1.21e-01 52_[+1(9.14e-05)]_60 chr3R:5611861-5611981 8.35e-03 39_[+2(5.94e-05)]_15_[+1(5.59e-05)]_\ 50 chr2L:15118158-15118278 7.71e-02 63_[+1(1.84e-05)]_49 chr3R:23763218-23763338 1.10e-02 67_[+1(1.13e-05)]_45 chr3L:5368046-5368166 1.75e-01 120 chr2L:13793448-13793568 4.37e-04 59_[+1(5.59e-05)]_28_[+5(7.01e-06)]_\ 17 chrX:17423455-17423575 1.32e-03 15_[+1(1.13e-05)]_48_[+2(1.21e-05)]_\ 41 chr3R:14513592-14513712 1.64e-03 31_[+2(5.94e-05)]_51_[+1(5.59e-05)]_\ 22 chr3R:23996351-23996471 7.89e-02 46_[+1(9.14e-05)]_66 chr3R:25493428-25493548 2.24e-05 1_[+2(4.53e-05)]_29_[+1(1.84e-05)]_\ 27_[+4(8.32e-06)]_39 chr3L:4367471-4367591 3.12e-02 61_[+1(4.24e-06)]_51 chr3L:21131529-21131649 9.95e-01 120 chr2R:22066791-22066911 3.56e-05 4_[+2(1.92e-05)]_10_[+4(3.51e-05)]_\ 19_[+1(5.59e-05)]_63 chr3L:8121720-8121840 2.57e-03 37_[+3(3.27e-05)]_75 chr2R:23925106-23925226 3.84e-02 104_[+1(5.59e-05)]_8 chr2L:6663791-6663911 9.45e-02 86_[+1(5.59e-05)]_26 chr3L:10698301-10698421 8.13e-01 120 chrX:19664015-19664135 2.00e-02 10_[+4(6.46e-05)]_102 chr2R:8891443-8891563 9.44e-01 120 chr3R:10045510-10045630 2.07e-04 10_[+2(1.21e-05)]_8_[+3(3.27e-05)]_\ 60_[+2(3.10e-05)]_18 chr2L:3480561-3480681 2.60e-01 120 chr2R:10437549-10437669 8.88e-01 120 chr2R:7712023-7712143 2.01e-03 45_[+3(3.27e-05)]_10_[+1(9.14e-05)]_\ 49 chr2L:19565582-19565702 1.06e-01 120 chrX:8407256-8407376 2.36e-06 39_[+1(9.14e-05)]_19_[+3(3.27e-05)]_\ 10_[+5(7.01e-06)]_28 chr2R:13235890-13236010 4.08e-03 83_[+1(1.13e-05)]_29 chr2R:9836859-9836979 1.80e-02 45_[+3(3.27e-05)]_67 chr2R:22492139-22492259 1.08e-03 18_[+3(3.27e-05)]_7_[+3(8.60e-05)]_\ 79 chr2R:9039570-9039690 1.26e-01 87_[+1(9.14e-05)]_25 chr3L:5662207-5662327 8.79e-03 23_[+3(3.27e-05)]_19_[+1(5.59e-05)]_\ 3_[+3(5.25e-05)]_51 chrX:11483370-11483490 1.63e-03 33_[+1(5.59e-05)]_3_[+2(7.51e-05)]_\ 58_[+1(3.25e-05)]_2 chr2L:7782806-7782926 7.11e-03 75_[+5(7.01e-06)]_37 chr2R:16344388-16344508 1.04e-02 18_[+4(1.34e-05)]_94 chr2L:1732287-1732407 4.54e-03 38_[+1(9.14e-05)]_15_[+2(1.21e-05)]_\ 51 chr2R:13239434-13239554 6.18e-04 16_[+2(8.21e-05)]_80_[+4(4.95e-05)]_\ 8 chr2L:1166413-1166533 3.90e-03 72_[+1(1.13e-05)]_18_[+3(5.25e-05)]_\ 14 chr2L:21179779-21179899 3.70e-01 105_[+1(9.14e-05)]_7 chr3L:18622512-18622632 3.80e-01 120 chr3L:19642794-19642914 6.40e-05 70_[+1(1.84e-05)]_14_[+4(4.15e-06)]_\ 20 chr2L:12096494-12096614 7.79e-03 29_[+1(9.14e-05)]_83 chr2R:9251950-9252070 5.85e-03 72_[+2(1.21e-05)]_40 chrX:19746000-19746120 5.41e-02 46_[+1(9.14e-05)]_66 chrX:1868778-1868898 8.85e-04 46_[+1(9.14e-05)]_30_[+4(4.95e-05)]_\ 28 chrX:8152825-8152945 2.78e-04 26_[+4(3.09e-05)]_14_[+1(5.59e-05)]_\ 24_[+2(9.48e-05)]_32 chr2L:18677098-18677218 2.19e-02 66_[+2(3.10e-05)]_46 chr3L:324685-324805 4.83e-03 25_[+3(3.27e-05)]_15_[+1(5.59e-05)]_\ 64 chr3R:20762565-20762685 3.00e-01 97_[+1(9.14e-05)]_15 chr3L:10631053-10631173 1.47e-01 29_[+1(9.14e-05)]_83 chr3R:30423858-30423978 8.53e-07 19_[+3(5.25e-05)]_30_[+1(1.13e-05)]_\ 5_[+2(1.21e-05)]_42 chr3R:23348014-23348134 1.07e-04 25_[+4(4.15e-06)]_13_[+1(1.84e-05)]_\ 66 chr2L:6561666-6561786 2.19e-01 120 chr2R:7510175-7510295 3.56e-04 10_[+2(1.21e-05)]_3_[+1(1.84e-05)]_\ 91 chr2L:2216244-2216364 9.93e-01 120 chrX:18565996-18566116 9.00e-05 49_[+4(3.09e-05)]_5_[+1(5.59e-05)]_\ 5_[+2(3.10e-05)]_37 chr3L:11711407-11711527 1.09e-02 100_[+4(4.15e-06)]_12 chr2R:12431068-12431188 3.26e-04 101_[+3(3.27e-05)]_11 chrX:17842045-17842165 1.19e-02 120 chr3R:7080410-7080530 7.43e-01 120 chr3L:2107628-2107748 2.88e-01 33_[+1(9.14e-05)]_79 chr3R:11412539-11412659 1.49e-01 120 chr3L:8576188-8576308 9.94e-01 120 chrX:9149125-9149245 8.05e-01 120 chr4:1064926-1065046 2.78e-01 82_[+1(9.14e-05)]_30 chrX:841254-841374 3.95e-02 94_[+1(5.59e-05)]_18 chr2R:19292431-19292551 4.50e-02 112_[+5(7.01e-06)] chr2L:9996578-9996698 1.50e-01 6_[+1(9.14e-05)]_106 chr2L:155238-155358 1.98e-03 74_[+2(1.92e-05)]_38 chr3L:13387808-13387928 9.02e-01 120 chr3R:10571637-10571757 1.66e-04 52_[+2(8.63e-05)]_16_[+1(5.59e-05)]_\ 36 chr2L:13289850-13289970 2.45e-02 108_[+1(1.84e-05)]_4 chr2L:1177598-1177718 1.14e-02 84_[+3(3.27e-05)]_28 chr2L:8438198-8438318 2.23e-04 75_[+1(1.13e-05)]_4_[+2(1.21e-05)]_\ 25 chr3L:7339242-7339362 9.78e-01 120 chr2L:294707-294827 6.04e-01 120 chr2L:2357479-2357599 1.65e-01 120 chr2R:16322098-16322218 9.54e-03 63_[+1(9.14e-05)]_49 chr3R:8726738-8726858 8.18e-04 29_[+2(7.51e-05)]_25_[+1(1.84e-05)]_\ 50 chr3R:18385742-18385862 4.63e-02 120 chr2R:19503007-19503127 2.43e-01 120 chr2R:21090975-21091095 3.42e-03 37_[+1(5.59e-05)]_75 chrX:801656-801776 3.73e-01 87_[+1(9.14e-05)]_25 chrX:11572427-11572547 2.42e-01 120 chr3L:11728241-11728361 6.74e-05 28_[+4(2.17e-05)]_53_[+1(1.13e-05)]_\ 23 chr2R:16149856-16149976 4.94e-03 19_[+4(8.54e-05)]_15_[+1(1.13e-05)]_\ 70 chr2L:5907018-5907138 6.10e-04 29_[+1(1.13e-05)]_46_[+2(3.10e-05)]_\ 29 chr3R:29835439-29835559 2.63e-04 49_[+4(4.15e-06)]_63 chr2R:4782838-4782958 3.79e-01 120 chrX:18566198-18566318 1.25e-02 107_[+1(5.59e-05)]_5 chr2R:24780810-24780930 6.72e-04 25_[+4(3.09e-05)]_6_[+1(1.84e-05)]_\ 73 chr2L:13790785-13790905 8.37e-01 120 chrX:11137043-11137163 3.19e-04 14_[+1(1.13e-05)]_14_[+1(1.84e-05)]_\ 5_[+2(7.51e-05)]_63 chr2L:8198853-8198973 3.14e-06 19_[+4(4.15e-06)]_27_[+1(1.13e-05)]_\ 58 chr2R:24571746-24571866 9.67e-03 79_[+2(3.82e-05)]_13_[+1(5.59e-05)]_\ 12 chr3R:18677540-18677660 8.16e-01 120 chr2L:21166580-21166700 3.51e-02 51_[+2(5.24e-05)]_61 chr3R:28811329-28811449 3.31e-01 120 chr2R:13152658-13152778 1.22e-02 54_[+1(1.84e-05)]_58 chr3R:19643021-19643141 1.58e-01 110_[+1(9.14e-05)]_2 chr2R:10838712-10838832 3.21e-05 34_[+5(7.01e-06)]_61_[+4(4.15e-06)]_\ 9 chrX:16651197-16651317 1.57e-02 43_[+5(7.23e-05)]_43_[+5(2.30e-05)]_\ 18 chr2R:16230675-16230795 1.66e-02 23_[+1(9.14e-05)]_89 chr2L:19526427-19526547 2.86e-01 120 chr2R:17604629-17604749 2.54e-01 70_[+1(5.59e-05)]_42 chr3R:11429942-11430062 3.99e-02 64_[+1(5.59e-05)]_16_[+1(1.13e-05)]_\ 24 chrX:20159982-20160102 2.07e-02 52_[+3(3.27e-05)]_60 chr3R:14315901-14316021 1.24e-01 120 chr3L:16580101-16580221 6.73e-01 120 chr3R:16004159-16004279 6.72e-01 120 chr3L:10661478-10661598 3.29e-01 120 chrX:19494407-19494527 4.12e-02 37_[+1(1.84e-05)]_75 chr2L:16356890-16357010 1.96e-03 34_[+3(3.27e-05)]_78 chr3R:17053539-17053659 5.78e-02 120 chr2L:6622782-6622902 3.52e-01 120 chrX:6279476-6279596 3.06e-02 91_[+3(3.27e-05)]_21 chrX:11905369-11905489 3.16e-01 120 chr2R:17419995-17420115 9.06e-01 120 chr3L:8304085-8304205 7.06e-02 120 chr2L:8437317-8437437 6.13e-05 10_[+4(8.13e-05)]_60_[+1(5.59e-05)]_\ 6_[+2(1.21e-05)]_20 chr2R:7653951-7654071 3.15e-03 36_[+1(5.59e-05)]_17_[+3(5.25e-05)]_\ 51 chrX:11816634-11816754 4.94e-01 120 chr2R:9098466-9098586 2.51e-03 20_[+2(1.21e-05)]_20_[+1(5.59e-05)]_\ 64 chrX:5329670-5329790 2.82e-01 91_[+1(9.14e-05)]_21 chr2R:21481817-21481937 1.11e-01 82_[+1(5.59e-05)]_30 chr2R:7972313-7972433 5.84e-01 120 chr3L:9729912-9730032 6.10e-02 33_[+1(9.14e-05)]_79 chr3R:26056508-26056628 8.92e-03 18_[+4(8.13e-05)]_94 chr3L:8338951-8339071 1.04e-02 61_[+1(1.13e-05)]_51 chr2R:18705872-18705992 1.39e-02 31_[+3(8.60e-05)]_81 chr2R:8891647-8891767 3.44e-02 39_[+3(5.25e-05)]_73 chr3L:15566949-15567069 5.67e-01 120 chr2L:21142330-21142450 3.35e-01 120 chr2R:7512943-7513063 5.52e-01 120 chr2R:16772661-16772781 9.17e-02 30_[+1(9.14e-05)]_82 chrX:19170947-19171067 5.55e-02 120 chr2R:7407156-7407276 2.39e-02 120 chr3L:3811149-3811269 4.71e-04 51_[+1(5.59e-05)]_52_[+5(7.01e-06)]_\ 1 chr3L:15098039-15098159 9.49e-01 120 chr4:869478-869598 3.74e-02 120 chrX:617583-617703 2.17e-04 17_[+3(3.27e-05)]_59_[+1(5.59e-05)]_\ 28 chr2R:16291440-16291560 3.63e-05 23_[+2(3.10e-05)]_44_[+1(1.13e-05)]_\ 37 chr2R:18627807-18627927 1.44e-01 120 chr3L:8125110-8125230 4.16e-03 47_[+1(1.13e-05)]_65 chrX:15992268-15992388 6.50e-02 61_[+3(3.27e-05)]_51 chr3L:7915996-7916116 2.06e-01 38_[+1(5.59e-05)]_74 chr2R:12980006-12980126 3.02e-02 14_[+1(9.14e-05)]_98 chr2R:13509533-13509653 1.43e-03 89_[+1(5.59e-05)]_23 chr2L:2220652-2220772 4.41e-03 93_[+5(7.01e-06)]_19 chr2R:9114086-9114206 5.40e-01 120 chrX:1476962-1477082 7.81e-05 74_[+3(3.27e-05)]_17_[+1(1.84e-05)]_\ 13 chr3L:10686771-10686891 7.00e-03 6_[+2(6.37e-05)]_106 chrX:15759889-15760009 6.49e-01 120 chr3L:20494399-20494519 3.16e-01 120 chr3L:15116579-15116699 2.77e-01 120 chr3R:5270963-5271083 1.17e-01 58_[+1(5.59e-05)]_54 chr3L:12116008-12116128 2.48e-02 23_[+3(3.27e-05)]_89 chr3L:14219518-14219638 1.17e-01 34_[+1(5.59e-05)]_78 chr3L:15988147-15988267 9.19e-02 120 chr3L:5368260-5368380 7.87e-01 120 chr2R:9237859-9237979 1.67e-01 120 chr2L:3373403-3373523 2.73e-02 95_[+1(5.59e-05)]_17 chr3L:8765696-8765816 9.97e-01 120 chr2L:16732464-16732584 2.16e-02 93_[+5(1.12e-05)]_19 chr3R:29062951-29063071 3.64e-03 42_[+1(9.14e-05)]_70 chrX:15875712-15875832 2.23e-01 63_[+1(5.59e-05)]_49 chr3L:9972644-9972764 4.34e-03 83_[+1(9.14e-05)]_6_[+5(1.12e-05)]_\ 15 chr4:879217-879337 5.98e-01 120 chrX:4918733-4918853 4.63e-01 120 chr3R:29130973-29131093 2.35e-01 120 chr2R:6652909-6653029 1.24e-02 7_[+1(5.59e-05)]_105 chrX:2713954-2714074 5.20e-01 120 chrX:2065280-2065400 3.41e-01 120 chr3R:27275176-27275296 4.07e-02 70_[+1(9.14e-05)]_42 chr2R:6807551-6807671 5.80e-04 67_[+4(4.95e-05)]_[+5(1.12e-05)]_37 chr2R:12198843-12198963 4.62e-05 26_[+2(1.21e-05)]_78_[+4(8.32e-06)] chr2L:5987004-5987124 1.46e-02 47_[+1(5.59e-05)]_65 chr3L:2377513-2377633 2.12e-02 55_[+1(5.59e-05)]_57 chrX:11806393-11806513 3.11e-02 60_[+1(9.14e-05)]_52 chr3R:11796945-11797065 1.56e-03 44_[+2(3.10e-05)]_34_[+3(3.27e-05)]_\ 26 chr2R:9103152-9103272 8.02e-04 90_[+5(7.01e-06)]_22 chr2L:10331282-10331402 4.17e-01 120 chr2R:12037207-12037327 7.97e-02 103_[+3(8.60e-05)]_9 chr3L:8576394-8576514 7.92e-01 120 chr3L:1602659-1602779 4.24e-01 120 chrX:19704125-19704245 1.72e-03 2_[+2(8.63e-05)]_29_[+1(5.59e-05)]_\ 73 chr3L:9614078-9614198 7.10e-05 11_[+4(2.17e-05)]_79_[+4(3.09e-05)]_\ 14 chr4:1053961-1054081 6.17e-01 120 chrX:10385856-10385976 8.93e-06 44_[+3(3.27e-05)]_18_[+4(4.95e-05)]_\ 28_[+5(2.30e-05)]_6 chr2R:20640797-20640917 9.41e-01 120 chr2L:4224214-4224334 7.95e-02 45_[+1(1.84e-05)]_67 chr2R:6656373-6656493 4.44e-02 19_[+1(5.59e-05)]_93 chr2R:9116530-9116650 2.83e-01 120 chr3L:20816043-20816163 2.90e-03 25_[+3(3.27e-05)]_2_[+1(9.14e-05)]_\ 14_[+3(3.27e-05)]_55 chr3R:6009834-6009954 7.98e-01 120 chr2R:18660625-18660745 5.81e-04 40_[+3(3.27e-05)]_19_[+1(1.84e-05)]_\ 45 chr2L:3173107-3173227 2.96e-03 67_[+1(5.59e-05)]_23_[+4(4.95e-05)]_\ 14 chr2R:10437887-10438007 7.68e-06 2_[+2(1.21e-05)]_8_[+1(1.84e-05)]_\ 24_[+1(1.84e-05)]_9_[+4(8.32e-06)]_[+2(1.21e-05)]_37 chr2R:6653128-6653248 1.13e-01 120 chr2R:15542584-15542704 2.09e-03 57_[+1(9.14e-05)]_34_[+2(1.21e-05)]_\ 13 chr3L:8296996-8297116 1.16e-01 1_[+3(3.27e-05)]_111 chr2R:14871210-14871330 8.99e-01 120 chr3R:5483935-5484055 6.70e-01 120 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c27n07.farnam.hpc.yale.internal ********************************************************************************