# DREME 5.3.3
#     command: dreme -oc ../result/final_prediction/fly/inference_raw/DREME/RankLinear4.0_20_Myc/ -k 8 -m 5 -e 1000 -verbosity 1 -p ../result/final_prediction/fly/fasta/RankLinear4.0_20/Myc.fasta
#   positives: 1 from ../result/final_prediction/fly/fasta/RankLinear4.0_20/Myc.fasta (Sat Feb 12 15:50:52 EST 2022)
#   negatives: 1 from shuffled positives
#        host: c22n06.farnam.hpc.yale.internal
#        when: Sat Feb 12 15:55:55 EST 2022

MEME version 5.3.3

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.295 C 0.205 G 0.114 T 0.386


MOTIF AAAAAAGA DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    AAAAAAGA   TCTTTTTT          1          0   5.0e-001   1.7e+001

letter-probability matrix: alength= 4 w= 8 nsites= 1 E= 1.7e+001
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF AACATCGA DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    AACATCGA   TCGATGTT          1          0   5.0e-001   1.2e+001

letter-probability matrix: alength= 4 w= 8 nsites= 1 E= 1.2e+001
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF AAGATATA DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    AAGATATA   TATATCTT          1          0   5.0e-001   4.5e+000

letter-probability matrix: alength= 4 w= 8 nsites= 1 E= 4.5e+000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
1.000000 0.000000 0.000000 0.000000


MOTIF GGTCGCAA DREME-4

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    GGTCGCAA   TTGCGACC          1          0   5.0e-001   5.0e-001

letter-probability matrix: alength= 4 w= 8 nsites= 1 E= 5.0e-001
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 0.42 seconds